Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:53:48 (805756): wrapper (7.7.26015): starting
22:53:48 (805756): wrapper: running run_atlas (--nthreads 11)
[2025-10-12 22:53:48] Arguments: --nthreads 11
[2025-10-12 22:53:48] Threads: 11
[2025-10-12 22:53:48] Checking for CVMFS
[2025-10-12 22:53:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 22:53:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 22:53:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 22:53:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 22:53:48] 2.13.2.0 2216807 130108 422920 151645 0 188 35856575 40960000 1219 16776704 30 268774229 99.728 199494257 21781 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 22:53:48] CVMFS is ok
[2025-10-12 22:53:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 22:53:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 22:53:48] Further information can be found at the LHC@home message board.
[2025-10-12 22:53:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 22:53:48] Checking for apptainer binary...
[2025-10-12 22:53:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 22:53:48] Running /usr/bin/apptainer --version
[2025-10-12 22:53:48] apptainer version 1.4.3-1.el9
[2025-10-12 22:53:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 22:53:48] c7-11-11.aglt2.org
[2025-10-12 22:53:48] apptainer works
[2025-10-12 22:53:49] Set ATHENA_PROC_NUMBER=11
[2025-10-12 22:53:49] Set ATHENA_CORE_NUMBER=11
[2025-10-12 22:53:49] Starting ATLAS job with PandaID=6840849882
[2025-10-12 22:53:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:30:05]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:30:05]  status=None
[2025-10-12 23:30:05]  status_code=0
[2025-10-12 23:30:05]  storage_token=
[2025-10-12 23:30:05]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6840849882/log.46676269._090474.job.log.tgz.1
[2025-10-12 23:30:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f1/7a/log.46676269._090474.job.log.tgz.1
[2025-10-12 23:30:05]  workdir=None
[2025-10-12 23:30:05] ]
[2025-10-12 23:30:05] 2025-10-13 03:29:18,225 | INFO     | transferring file log.46676269._090474.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6840849882/log.46676269._090474.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 23:30:05] 2025-10-13 03:29:18,225 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6840849882/log.46676269._090474.job.log.tgz.1 /tmp/boinchome/slots/4/log.46676269._090474.job
[2025-10-12 23:30:05] 2025-10-13 03:29:18,239 | INFO     | adding to output.list: log.46676269._090474.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f1/7a/log.46676269._090474.job.log.tg
[2025-10-12 23:30:05] 2025-10-13 03:29:18,240 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 23:30:05] 2025-10-13 03:29:18,240 | INFO     | summary of transferred files:
[2025-10-12 23:30:05] 2025-10-13 03:29:18,240 | INFO     |  -- lfn=log.46676269._090474.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 23:30:05] 2025-10-13 03:29:18,241 | INFO     | stage-out finished correctly
[2025-10-12 23:30:05] 2025-10-13 03:29:18,761 | INFO     | time since job start (2121s) is within the limit (172800.0s)
[2025-10-12 23:30:05] 2025-10-13 03:29:19,389 | WARNING  | process 815869 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 23:30:05] 2025-10-13 03:29:19,389 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6840849882/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 23:30:05] 2025-10-13 03:29:19,561 | INFO     | number of running child processes to parent process 815869: 1
[2025-10-12 23:30:05] 2025-10-13 03:29:19,562 | INFO     | maximum number of monitored processes: 6
[2025-10-12 23:30:05] 2025-10-13 03:29:19,877 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 23:30:05] 2025-10-13 03:29:20,763 | INFO     | time since job start (2123s) is within the limit (172800.0s)
[2025-10-12 23:30:05] 2025-10-13 03:29:22,065 | INFO     | monitor loop #163: job 0:6840849882 is in state 'finished'
[2025-10-12 23:30:05] 2025-10-13 03:29:22,065 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:30:05] 2025-10-13 03:29:22,267 | INFO     | job 6840849882 has state=finished
[2025-10-12 23:30:05] 2025-10-13 03:29:22,268 | INFO     | preparing for final server update for job 6840849882 in state='finished'
[2025-10-12 23:30:05] 2025-10-13 03:29:22,268 | INFO     | this job has now completed (state=finished)
[2025-10-12 23:30:05] 2025-10-13 03:29:22,268 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 23:30:05] 2025-10-13 03:29:22,268 | INFO     | log transfer has been attempted: DONE
[2025-10-12 23:30:05] 2025-10-13 03:29:22,268 | INFO     | job 6840849882 has finished - writing final server update
[2025-10-12 23:30:05] 2025-10-13 03:29:22,269 | INFO     | total number of processed events: 400 (read)
[2025-10-12 23:30:05] 2025-10-13 03:29:22,269 | INFO     | executing command: lscpu
[2025-10-12 23:30:05] 2025-10-13 03:29:22,318 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 23:30:05] 2025-10-13 03:29:22,768 | INFO     | time since job start (2125s) is within the limit (172800.0s)
[2025-10-12 23:30:05] 2025-10-13 03:29:24,567 | INFO     | monitor loop #164: job 0:6840849882 is in state 'finished'
[2025-10-12 23:30:05] 2025-10-13 03:29:24,567 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:30:05] 2025-10-13 03:29:24,775 | INFO     | time since job start (2127s) is within the limit (172800.0s)
[2025-10-12 23:30:05] 2025-10-13 03:29:25,362 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 23:30:05] 2025-10-13 03:29:25,378 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3067.9745156249987
[2025-10-12 23:30:05] 2025-10-13 03:29:25,400 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6840849882/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 23:30:05] 2025-10-13 03:29:25,400 | INFO     | extracted standard info from prmon json
[2025-10-12 23:30:05] 2025-10-13 03:29:25,400 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 23:30:05] 2025-10-13 03:29:25,400 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 23:30:05] 2025-10-13 03:29:25,401 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 23:30:05] 2025-10-13 03:29:25,401 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:30:05] 2025-10-13 03:29:25,402 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:30:05] 2025-10-13 03:29:25,402 | INFO     | sum of square deviations: 6798267.0
[2025-10-12 23:30:05] 2025-10-13 03:29:25,402 | INFO     | sum of deviations: -1112294435.0000002
[2025-10-12 23:30:05] 2025-10-13 03:29:25,402 | INFO     | mean x: 1760325187.5
[2025-10-12 23:30:05] 2025-10-13 03:29:25,402 | INFO     | mean y: 2452721.1428571427
[2025-10-12 23:30:05] 2025-10-13 03:29:25,402 | INFO     | -- intersect: 288017017292.75824
[2025-10-12 23:30:05] 2025-10-13 03:29:25,402 | INFO     | intersect: 288017017292.75824
[2025-10-12 23:30:05] 2025-10-13 03:29:25,402 | INFO     | chi2: 0.014806512598973011
[2025-10-12 23:30:05] 2025-10-13 03:29:25,403 | INFO     | -- intersect: 288017017292.75824
[2025-10-12 23:30:05] 2025-10-13 03:29:25,403 | INFO     | current memory leak: -163.61 B/s (using 28 data points, chi2=0.01)
[2025-10-12 23:30:05] 2025-10-13 03:29:25,403 | INFO     | could have reported an average CPU frequency of 3060 MHz (5 samples)
[2025-10-12 23:30:05] 2025-10-13 03:29:25,403 | INFO     | ..............................
[2025-10-12 23:30:05] 2025-10-13 03:29:25,403 | INFO     | . Timing measurements:
[2025-10-12 23:30:05] 2025-10-13 03:29:25,403 | INFO     | . get job = 0 s
[2025-10-12 23:30:05] 2025-10-13 03:29:25,403 | INFO     | . initial setup = 2 s
[2025-10-12 23:30:05] 2025-10-13 03:29:25,403 | INFO     | . payload setup = 3 s
[2025-10-12 23:30:05] 2025-10-13 03:29:25,403 | INFO     | . stage-in = 0 s
[2025-10-12 23:30:05] 2025-10-13 03:29:25,403 | INFO     | . payload execution = 2097 s
[2025-10-12 23:30:05] 2025-10-13 03:29:25,404 | INFO     | . stage-out = 0 s
[2025-10-12 23:30:05] 2025-10-13 03:29:25,404 | INFO     | . log creation = 0 s
[2025-10-12 23:30:05] 2025-10-13 03:29:25,404 | INFO     | ..............................
[2025-10-12 23:30:05] 2025-10-13 03:29:25,462 | INFO     | 
[2025-10-12 23:30:05] 2025-10-13 03:29:25,463 | INFO     | job summary report
[2025-10-12 23:30:05] 2025-10-13 03:29:25,463 | INFO     | --------------------------------------------------
[2025-10-12 23:30:05] 2025-10-13 03:29:25,463 | INFO     | PanDA job id: 6840849882
[2025-10-12 23:30:05] 2025-10-13 03:29:25,463 | INFO     | task id: 46676269
[2025-10-12 23:30:05] 2025-10-13 03:29:25,463 | INFO     | errors: (none)
[2025-10-12 23:30:05] 2025-10-13 03:29:25,463 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:30:05] 2025-10-13 03:29:25,463 | INFO     | pilot state: finished 
[2025-10-12 23:30:05] 2025-10-13 03:29:25,463 | INFO     | transexitcode: 0
[2025-10-12 23:30:05] 2025-10-13 03:29:25,463 | INFO     | exeerrorcode: 0
[2025-10-12 23:30:05] 2025-10-13 03:29:25,463 | INFO     | exeerrordiag: 
[2025-10-12 23:30:05] 2025-10-13 03:29:25,463 | INFO     | exitcode: 0
[2025-10-12 23:30:05] 2025-10-13 03:29:25,463 | INFO     | exitmsg: OK
[2025-10-12 23:30:05] 2025-10-13 03:29:25,463 | INFO     | cpuconsumptiontime: 20524 s
[2025-10-12 23:30:05] 2025-10-13 03:29:25,463 | INFO     | nevents: 400
[2025-10-12 23:30:05] 2025-10-13 03:29:25,463 | INFO     | neventsw: 0
[2025-10-12 23:30:05] 2025-10-13 03:29:25,463 | INFO     | pid: 815869
[2025-10-12 23:30:05] 2025-10-13 03:29:25,463 | INFO     | pgrp: 815869
[2025-10-12 23:30:05] 2025-10-13 03:29:25,463 | INFO     | corecount: 11
[2025-10-12 23:30:05] 2025-10-13 03:29:25,463 | INFO     | event service: False
[2025-10-12 23:30:05] 2025-10-13 03:29:25,463 | INFO     | sizes: {0: 2348857, 3: 2349119, 11: 2349147, 2105: 2374263, 2107: 2383261, 2109: 2383317, 2114: 2383671}
[2025-10-12 23:30:05] 2025-10-13 03:29:25,464 | INFO     | --------------------------------------------------
[2025-10-12 23:30:05] 2025-10-13 03:29:25,464 | INFO     | 
[2025-10-12 23:30:05] 2025-10-13 03:29:25,464 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-12 23:30:05] 2025-10-13 03:29:25,478 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:30:05] 2025-10-13 03:29:25,478 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:30:05] 2025-10-13 03:29:25,478 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:30:05] 2025-10-13 03:29:25,478 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:30:05] 2025-10-13 03:29:25,478 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:30:05] 2025-10-13 03:29:25,478 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:30:05] 2025-10-13 03:29:25,478 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:30:05] 2025-10-13 03:29:25,478 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:30:05] 2025-10-13 03:29:25,479 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:30:05] 2025-10-13 03:29:25,479 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:30:05] 2025-10-13 03:29:25,479 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:30:05] 2025-10-13 03:29:25,479 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:30:05] 2025-10-13 03:29:25,479 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:30:05] 2025-10-13 03:29:25,479 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:30:05] 2025-10-13 03:29:25,479 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:30:05] 2025-10-13 03:29:25,479 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:30:05] 2025-10-13 03:29:25,479 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:30:05] 2025-10-13 03:29:25,479 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:30:05] 2025-10-13 03:29:25,479 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:30:05] 2025-10-13 03:29:25,479 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:30:05] 2025-10-13 03:29:25,479 | INFO     | job 6840849882 has completed (purged errors)
[2025-10-12 23:30:05] 2025-10-13 03:29:25,479 | INFO     | overall cleanup function is called
[2025-10-12 23:30:05] 2025-10-13 03:29:26,487 | INFO     | --- collectZombieJob: --- 10, [815869]
[2025-10-12 23:30:05] 2025-10-13 03:29:26,487 | INFO     | zombie collector waiting for pid 815869
[2025-10-12 23:30:05] 2025-10-13 03:29:26,487 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:30:05] 2025-10-13 03:29:26,487 | INFO     | collected zombie processes
[2025-10-12 23:30:05] 2025-10-13 03:29:26,487 | INFO     | will attempt to kill all subprocesses of pid=815869
[2025-10-12 23:30:05] 2025-10-13 03:29:26,659 | INFO     | process IDs to be killed: [815869] (in reverse order)
[2025-10-12 23:30:05] 2025-10-13 03:29:26,724 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:30:05] 2025-10-13 03:29:26,724 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:30:05] 2025-10-13 03:29:26,732 | INFO     | did not find any defunct processes belonging to 815869
[2025-10-12 23:30:05] 2025-10-13 03:29:26,738 | INFO     | did not find any defunct processes belonging to 815869
[2025-10-12 23:30:05] 2025-10-13 03:29:26,738 | INFO     | ready for new job
[2025-10-12 23:30:05] 2025-10-13 03:29:26,738 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:30:05] 2025-10-13 03:29:26,739 | INFO     | ***************************************
[2025-10-12 23:30:05] 2025-10-13 03:29:26,739 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:30:05] 2025-10-13 03:29:26,739 | INFO     | ***************************************
[2025-10-12 23:30:05] 2025-10-13 03:29:26,739 | INFO     | 
[2025-10-12 23:30:05] 2025-10-13 03:29:26,753 | INFO     | architecture information:
[2025-10-12 23:30:05] 2025-10-13 03:29:26,753 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:30:05] 2025-10-13 03:29:26,764 | INFO     | cat /etc/os-release:
[2025-10-12 23:30:05] NAME="CentOS Linux"
[2025-10-12 23:30:05] VERSION="7 (Core)"
[2025-10-12 23:30:05] ID="centos"
[2025-10-12 23:30:05] ID_LIKE="rhel fedora"
[2025-10-12 23:30:05] VERSION_ID="7"
[2025-10-12 23:30:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:30:05] ANSI_COLOR="0;31"
[2025-10-12 23:30:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:30:05] HOME_URL="https://www.centos.org/"
[2025-10-12 23:30:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:30:05] 
[2025-10-12 23:30:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:30:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:30:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:30:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:30:05] 
[2025-10-12 23:30:05] 2025-10-13 03:29:26,764 | INFO     | ***************************************
[2025-10-12 23:30:05] 2025-10-13 03:29:27,267 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-12 23:30:05] 2025-10-13 03:29:27,277 | INFO     | sufficient remaining disk space (83756056576 B)
[2025-10-12 23:30:05] 2025-10-13 03:29:27,278 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:30:05] 2025-10-13 03:29:27,278 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:30:05] 2025-10-13 03:29:27,279 | INFO     | update_server=False
[2025-10-12 23:30:05] 2025-10-13 03:29:27,279 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:30:05] 2025-10-13 03:29:27,279 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:30:05] 2025-10-13 03:29:27,279 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:30:05] 2025-10-13 03:29:27,928 | INFO     | all data control threads have been joined
[2025-10-12 23:30:05] 2025-10-13 03:29:28,075 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:30:05] 2025-10-13 03:29:28,076 | INFO     | aborting loop
[2025-10-12 23:30:05] 2025-10-13 03:29:28,284 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:30:05] 2025-10-13 03:29:28,285 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:30:05] 2025-10-13 03:29:28,348 | INFO     | all payload control threads have been joined
[2025-10-12 23:30:05] 2025-10-13 03:29:28,474 | INFO     | all job control threads have been joined
[2025-10-12 23:30:05] 2025-10-13 03:29:28,572 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:30:05] 2025-10-13 03:29:28,921 | INFO     | [job] validate thread has finished
[2025-10-12 23:30:05] 2025-10-13 03:29:28,933 | INFO     | [data] control thread has finished
[2025-10-12 23:30:05] 2025-10-13 03:29:28,992 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:30:05] 2025-10-13 03:29:29,080 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:30:05] 2025-10-13 03:29:29,085 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:30:05] 2025-10-13 03:29:29,208 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:30:05] 2025-10-13 03:29:29,235 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:30:05] 2025-10-13 03:29:29,284 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:30:05] 2025-10-13 03:29:29,349 | INFO     | [payload] control thread has finished
[2025-10-12 23:30:05] 2025-10-13 03:29:29,480 | INFO     | [job] control thread has finished
[2025-10-12 23:30:05] 2025-10-13 03:29:29,595 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:30:05] 2025-10-13 03:29:29,661 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:30:05] 2025-10-13 03:29:30,442 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:30:05] 2025-10-13 03:29:34,448 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:30:05] 2025-10-13 03:29:58,054 | INFO     | PID=809451 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 23:30:05] 2025-10-13 03:29:58,054 | INFO     | .. there are 5 such processes running
[2025-10-12 23:30:05] 2025-10-13 03:29:58,054 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:30:05] 2025-10-13 03:29:58,054 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:30:05] 2025-10-13 03:29:58,054 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:30:05] 2025-10-13 03:29:59,170 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:30:05] 2025-10-13 03:30:00,355 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139754284975936)>', '<ExcThread(monitor, started 139753655621376)>']
[2025-10-12 23:30:05] 2025-10-13 03:30:01,069 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:30:05] 2025-10-13 03:30:01,069 | INFO     | [monitor] control thread has ended
[2025-10-12 23:30:05] 2025-10-13 03:30:05,380 | INFO     | all workflow threads have been joined
[2025-10-12 23:30:05] 2025-10-13 03:30:05,380 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:30:05] 2025-10-13 03:30:05,381 | INFO     | traces error code: 0
[2025-10-12 23:30:05] 2025-10-13 03:30:05,381 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:30:05] 2025-10-13 03:30:05,449 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:30:05] 2025-10-13 03:30:05,452 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:30:05] 2025-10-13 03:30:05,454 [wrapper] pilotpid: 809451
[2025-10-12 23:30:05] 2025-10-13 03:30:05,456 [wrapper] Pilot exit status: 0
[2025-10-12 23:30:05] 2025-10-13 03:30:05,466 [wrapper] pandaids: 6840849882
[2025-10-12 23:30:05] 2025-10-13 03:30:05,516 [wrapper] cleanup supervisor_pilot  864699 809452
[2025-10-12 23:30:05] 2025-10-13 03:30:05,518 [wrapper] Test setup, not cleaning
[2025-10-12 23:30:05] 2025-10-13 03:30:05,520 [wrapper] apfmon messages muted
[2025-10-12 23:30:05] 2025-10-13 03:30:05,522 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:30:05] 2025-10-13 03:30:05,524 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:30:05]  *** Error codes and diagnostics ***
[2025-10-12 23:30:05]     "exeErrorCode": 0,
[2025-10-12 23:30:05]     "exeErrorDiag": "",
[2025-10-12 23:30:05]     "pilotErrorCode": 0,
[2025-10-12 23:30:05]     "pilotErrorDiag": "",
[2025-10-12 23:30:05]  *** Listing of results directory ***
[2025-10-12 23:30:05] total 412948
[2025-10-12 23:30:05] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 17:56 queuedata.json
[2025-10-12 23:30:05] -rwx------. 1 boincer umatlas     36292 Oct 12 17:57 runpilot2-wrapper.sh
[2025-10-12 23:30:05] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 17:57 pilot3.tar.gz
[2025-10-12 23:30:05] -rw-r--r--. 1 boincer umatlas       100 Oct 12 22:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:30:05] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 22:53 run_atlas
[2025-10-12 23:30:05] -rw-r--r--. 1 boincer umatlas       105 Oct 12 22:53 job.xml
[2025-10-12 23:30:05] -rw-r--r--. 2 boincer umatlas 219882937 Oct 12 22:53 EVNT.46676267._004846.pool.root.1
[2025-10-12 23:30:05] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 22:53 start_atlas.sh
[2025-10-12 23:30:05] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 22:53 shared
[2025-10-12 23:30:05] -rw-r--r--. 2 boincer umatlas    569674 Oct 12 22:53 input.tar.gz
[2025-10-12 23:30:05] -rw-r--r--. 1 boincer umatlas         0 Oct 12 22:53 boinc_lockfile
[2025-10-12 23:30:05] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 22:53 pandaJob.out
[2025-10-12 23:30:05] -rw-------. 1 boincer umatlas    974373 Oct 12 22:53 agis_schedconf.cvmfs.json
[2025-10-12 23:30:05] -rw-------. 1 boincer umatlas   1560580 Oct 12 22:53 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:30:05] drwx------. 5 boincer umatlas      4096 Oct 12 22:53 pilot3
[2025-10-12 23:30:05] -rw-r--r--. 1 boincer umatlas      6900 Oct 12 23:20 init_data.xml
[2025-10-12 23:30:05] -rw-r--r--. 1 boincer umatlas       529 Oct 12 23:28 boinc_task_state.xml
[2025-10-12 23:30:05] -rw-------. 1 boincer umatlas 197684100 Oct 12 23:28 HITS.46676269._090474.pool.root.1
[2025-10-12 23:30:05] -rw-------. 1 boincer umatlas      1021 Oct 12 23:29 memory_monitor_summary.json
[2025-10-12 23:30:05] -rw-------. 1 boincer umatlas    347770 Oct 12 23:29 log.46676269._090474.job.log.tgz.1
[2025-10-12 23:30:05] -rw-------. 1 boincer umatlas        95 Oct 12 23:29 pilot_heartbeat.json
[2025-10-12 23:30:05] -rw-------. 1 boincer umatlas      7766 Oct 12 23:29 heartbeat.json
[2025-10-12 23:30:05] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 23:30 boinc_mmap_file
[2025-10-12 23:30:05] -rw-r--r--. 1 boincer umatlas        27 Oct 12 23:30 wrapper_checkpoint.txt
[2025-10-12 23:30:05] -rw-------. 1 boincer umatlas      4822 Oct 12 23:30 pilotlog.txt
[2025-10-12 23:30:05] -rw-------. 1 boincer umatlas    346004 Oct 12 23:30 log.46676269._090474.job.log.1
[2025-10-12 23:30:05] -rw-------. 1 boincer umatlas       357 Oct 12 23:30 output.list
[2025-10-12 23:30:05] -rw-r--r--. 1 boincer umatlas       620 Oct 12 23:30 runtime_log
[2025-10-12 23:30:05] -rw-------. 1 boincer umatlas    716800 Oct 12 23:30 result.tar.gz
[2025-10-12 23:30:05] -rw-r--r--. 1 boincer umatlas      8705 Oct 12 23:30 runtime_log.err
[2025-10-12 23:30:05] -rw-------. 1 boincer umatlas       650 Oct 12 23:30 79vNDmVFJS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSllNDmVGvJrn.diag
[2025-10-12 23:30:05] -rw-r--r--. 1 boincer umatlas     22038 Oct 12 23:30 stderr.txt
[2025-10-12 23:30:05] HITS file was successfully produced:
[2025-10-12 23:30:05] -rw-------. 1 boincer umatlas 197684100 Oct 12 23:28 shared/HITS.pool.root.1
[2025-10-12 23:30:05]  *** Contents of shared directory: ***
[2025-10-12 23:30:05] total 409068
[2025-10-12 23:30:05] -rw-r--r--. 2 boincer umatlas 219882937 Oct 12 22:53 ATLAS.root_0
[2025-10-12 23:30:05] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 22:53 start_atlas.sh
[2025-10-12 23:30:05] -rw-r--r--. 2 boincer umatlas    569674 Oct 12 22:53 input.tar.gz
[2025-10-12 23:30:05] -rw-------. 1 boincer umatlas 197684100 Oct 12 23:28 HITS.pool.root.1
[2025-10-12 23:30:05] -rw-------. 1 boincer umatlas    716800 Oct 12 23:30 result.tar.gz
23:30:06 (805756): run_atlas exited; CPU time 20530.438109
23:30:06 (805756): called boinc_finish(0)

</stderr_txt>
]]>

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