Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:19:49 (3451544): wrapper (7.7.26015): starting
14:19:49 (3451544): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 14:19:49] Arguments: --nthreads 3
[2025-10-13 14:19:49] Threads: 3
[2025-10-13 14:19:49] Checking for CVMFS
[2025-10-13 14:19:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 14:19:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 14:19:49] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 14:19:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 14:19:50] 2.9.2.0 3205981 859 60648 151661 3 56 30770415 36864000 0 130560 0 639408 99.990 30662 649 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 14:19:50] CVMFS is ok
[2025-10-13 14:19:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 14:19:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 14:19:50] Further information can be found at the LHC@home message board.
[2025-10-13 14:19:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 14:19:50] Checking for apptainer binary...
[2025-10-13 14:19:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 14:19:50] Running /usr/bin/apptainer --version
[2025-10-13 14:19:50] apptainer version 1.4.1-1.1
[2025-10-13 14:19:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 14:19:50] thA335
[2025-10-13 14:19:50] apptainer works
[2025-10-13 14:19:50] Set ATHENA_PROC_NUMBER=3
[2025-10-13 14:19:50] Set ATHENA_CORE_NUMBER=3
[2025-10-13 14:19:50] Starting ATLAS job with PandaID=6840849986
[2025-10-13 14:19:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 15:56:32]  *** The last 200 lines of the pilot log: ***
[2025-10-13 15:56:32] 2025-10-13 13:56:01,957 | INFO     | will abort loop
[2025-10-13 15:56:32] 2025-10-13 13:56:02,039 | INFO     | all data control threads have been joined
[2025-10-13 15:56:32] 2025-10-13 13:56:02,958 | INFO     | [job] queue monitor thread has finished
[2025-10-13 15:56:32] 2025-10-13 13:56:02,959 | INFO     | [job] retrieve thread has finished
[2025-10-13 15:56:32] 2025-10-13 13:56:02,962 | INFO     | [job] job monitor thread has finished
[2025-10-13 15:56:32] 2025-10-13 13:56:02,993 | INFO     | all payload control threads have been joined
[2025-10-13 15:56:32] 2025-10-13 13:56:03,045 | INFO     | [data] control thread has finished
[2025-10-13 15:56:32] 2025-10-13 13:56:03,055 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 15:56:32] 2025-10-13 13:56:03,144 | INFO     | all job control threads have been joined
[2025-10-13 15:56:32] 2025-10-13 13:56:03,354 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 15:56:32] 2025-10-13 13:56:03,624 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 15:56:32] 2025-10-13 13:56:03,666 | INFO     | [job] validate thread has finished
[2025-10-13 15:56:32] 2025-10-13 13:56:03,700 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 15:56:32] 2025-10-13 13:56:03,876 | INFO     | [payload] failed_post thread has finished
[2025-10-13 15:56:32] 2025-10-13 13:56:03,958 | INFO     | [data] copytool_out thread has finished
[2025-10-13 15:56:32] 2025-10-13 13:56:03,959 | INFO     | [data] copytool_in thread has finished
[2025-10-13 15:56:32] 2025-10-13 13:56:03,999 | INFO     | [payload] control thread has finished
[2025-10-13 15:56:32] 2025-10-13 13:56:04,150 | INFO     | [job] control thread has finished
[2025-10-13 15:56:32] 2025-10-13 13:56:04,408 | INFO     | [payload] validate_post thread has finished
[2025-10-13 15:56:32] 2025-10-13 13:56:07,062 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 15:56:32] 2025-10-13 13:56:07,983 | INFO     | [monitor] cgroup control has ended
[2025-10-13 15:56:32] 2025-10-13 13:56:12,356 | INFO     | job.realtimelogging is not enabled
[2025-10-13 15:56:32] 2025-10-13 13:56:13,362 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 15:56:32] 2025-10-13 13:56:13,440 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139995955087168)>', '<ExcThread(monitor, started 139995331426048)>']
[2025-10-13 15:56:32] 2025-10-13 13:56:18,463 | INFO     | all workflow threads have been joined
[2025-10-13 15:56:32] 2025-10-13 13:56:18,463 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 15:56:32] 2025-10-13 13:56:18,464 | INFO     | traces error code: 0
[2025-10-13 15:56:32] 2025-10-13 13:56:18,464 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 15:56:32] 2025-10-13 13:56:32,431 | INFO     | PID=3455265 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 15:56:32] 2025-10-13 13:56:32,432 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 15:56:32] 2025-10-13 13:56:32,432 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 15:56:32] 2025-10-13 13:56:32,432 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 15:56:32] 2025-10-13 13:56:32,432 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 15:56:32] 2025-10-13 13:56:32,432 | INFO     | [monitor] control thread has ended
[2025-10-13 15:56:32] 2025-10-13 13:56:32,478 [wrapper] ==== pilot stdout END ====
[2025-10-13 15:56:32] 2025-10-13 13:56:32,481 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 15:56:32] 2025-10-13 13:56:32,484 [wrapper] pilotpid: 3455265
[2025-10-13 15:56:32] 2025-10-13 13:56:32,487 [wrapper] Pilot exit status: 0
[2025-10-13 15:56:32] 2025-10-13 13:56:32,494 [wrapper] pandaids: 6840849986
[2025-10-13 15:56:32] 2025-10-13 13:56:32,510 [wrapper] cleanup supervisor_pilot 3475394 3455266
[2025-10-13 15:56:32] 2025-10-13 13:56:32,513 [wrapper] Test setup, not cleaning
[2025-10-13 15:56:32] 2025-10-13 13:56:32,515 [wrapper] apfmon messages muted
[2025-10-13 15:56:32] 2025-10-13 13:56:32,518 [wrapper] ==== wrapper stdout END ====
[2025-10-13 15:56:32] 2025-10-13 13:56:32,521 [wrapper] ==== wrapper stderr END ====
[2025-10-13 15:56:32]  *** Error codes and diagnostics ***
[2025-10-13 15:56:32]     "exeErrorCode": 0,
[2025-10-13 15:56:32]     "exeErrorDiag": "",
[2025-10-13 15:56:32]     "pilotErrorCode": 0,
[2025-10-13 15:56:32]     "pilotErrorDiag": "",
[2025-10-13 15:56:32]  *** Listing of results directory ***
[2025-10-13 15:56:32] total 409272
[2025-10-13 15:56:32] -rw-r--r-- 1 boinc boinc    557409 Oct 12 23:57 pilot3.tar.gz
[2025-10-13 15:56:32] -rw-r--r-- 1 boinc boinc      5112 Oct 13 00:00 queuedata.json
[2025-10-13 15:56:32] -rwx------ 1 boinc boinc     36292 Oct 13 00:01 runpilot2-wrapper.sh
[2025-10-13 15:56:32] -rw-r--r-- 1 boinc boinc       100 Oct 13 14:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 15:56:32] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 14:19 run_atlas
[2025-10-13 15:56:32] -rw-r--r-- 1 boinc boinc       105 Oct 13 14:19 job.xml
[2025-10-13 15:56:32] -rw-r--r-- 2 boinc boinc 219668695 Oct 13 14:19 EVNT.46676267._004055.pool.root.1
[2025-10-13 15:56:32] drwxrwx--x 2 boinc boinc      4096 Oct 13 14:19 shared
[2025-10-13 15:56:32] -rw-r--r-- 2 boinc boinc    569678 Oct 13 14:19 input.tar.gz
[2025-10-13 15:56:32] -rw-r--r-- 2 boinc boinc     15120 Oct 13 14:19 start_atlas.sh
[2025-10-13 15:56:32] -rw-r--r-- 1 boinc boinc         0 Oct 13 14:19 boinc_setup_complete
[2025-10-13 15:56:32] -rw-r--r-- 1 boinc boinc      6195 Oct 13 14:19 init_data.xml
[2025-10-13 15:56:32] -rw-r--r-- 1 boinc boinc         0 Oct 13 14:19 boinc_lockfile
[2025-10-13 15:56:32] -rw-r--r-- 1 boinc boinc      2547 Oct 13 14:19 pandaJob.out
[2025-10-13 15:56:32] -rw------- 1 boinc boinc    972497 Oct 13 14:19 agis_schedconf.cvmfs.json
[2025-10-13 15:56:32] -rw------- 1 boinc boinc   1560580 Oct 13 14:19 agis_ddmendpoints.agis.ALL.json
[2025-10-13 15:56:32] drwx------ 5 boinc boinc      4096 Oct 13 14:20 pilot3
[2025-10-13 15:56:32] -rw------- 1 boinc boinc 193371255 Oct 13 15:55 HITS.46676269._090578.pool.root.1
[2025-10-13 15:56:32] -rw-r--r-- 1 boinc boinc       529 Oct 13 15:55 boinc_task_state.xml
[2025-10-13 15:56:32] -rw------- 1 boinc boinc      1015 Oct 13 15:55 memory_monitor_summary.json
[2025-10-13 15:56:32] -rw------- 1 boinc boinc    249701 Oct 13 15:55 log.46676269._090578.job.log.tgz.1
[2025-10-13 15:56:32] -rw------- 1 boinc boinc      7754 Oct 13 15:56 heartbeat.json
[2025-10-13 15:56:32] -rw-r--r-- 1 boinc boinc        27 Oct 13 15:56 wrapper_checkpoint.txt
[2025-10-13 15:56:32] -rw-r--r-- 1 boinc boinc      8192 Oct 13 15:56 boinc_mmap_file
[2025-10-13 15:56:32] -rw------- 1 boinc boinc       747 Oct 13 15:56 pilotlog.txt
[2025-10-13 15:56:32] -rw------- 1 boinc boinc        95 Oct 13 15:56 pilot_heartbeat.json
[2025-10-13 15:56:32] -rw------- 1 boinc boinc    839235 Oct 13 15:56 log.46676269._090578.job.log.1
[2025-10-13 15:56:32] -rw------- 1 boinc boinc       357 Oct 13 15:56 output.list
[2025-10-13 15:56:32] -rw-r--r-- 1 boinc boinc       620 Oct 13 15:56 runtime_log
[2025-10-13 15:56:32] -rw------- 1 boinc boinc   1105920 Oct 13 15:56 result.tar.gz
[2025-10-13 15:56:32] -rw-r--r-- 1 boinc boinc      8777 Oct 13 15:56 runtime_log.err
[2025-10-13 15:56:32] -rw------- 1 boinc boinc       658 Oct 13 15:56 J1nLDmcJJS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfmlNDmludUJn.diag
[2025-10-13 15:56:32] -rw-r--r-- 1 boinc boinc      6902 Oct 13 15:56 stderr.txt
[2025-10-13 15:56:32] HITS file was successfully produced:
[2025-10-13 15:56:32] -rw------- 1 boinc boinc 193371255 Oct 13 15:55 shared/HITS.pool.root.1
[2025-10-13 15:56:32]  *** Contents of shared directory: ***
[2025-10-13 15:56:32] total 405028
[2025-10-13 15:56:32] -rw-r--r-- 2 boinc boinc 219668695 Oct 13 14:19 ATLAS.root_0
[2025-10-13 15:56:32] -rw-r--r-- 2 boinc boinc    569678 Oct 13 14:19 input.tar.gz
[2025-10-13 15:56:32] -rw-r--r-- 2 boinc boinc     15120 Oct 13 14:19 start_atlas.sh
[2025-10-13 15:56:32] -rw------- 1 boinc boinc 193371255 Oct 13 15:55 HITS.pool.root.1
[2025-10-13 15:56:32] -rw------- 1 boinc boinc   1105920 Oct 13 15:56 result.tar.gz
15:56:34 (3451544): run_atlas exited; CPU time 16484.363852
15:56:34 (3451544): called boinc_finish(0)

</stderr_txt>
]]>

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