Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:39:10 (3857545): wrapper (7.7.26015): starting
19:39:10 (3857545): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 19:39:10] Arguments: --nthreads 3
[2025-10-13 19:39:10] Threads: 3
[2025-10-13 19:39:10] Checking for CVMFS
[2025-10-13 19:39:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 19:39:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 19:39:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 19:39:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 19:39:10] 2.9.2.0 3830781 88 49868 151668 0 57 3344496 36864000 0 130560 0 65728 99.987 2676 827 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 19:39:10] CVMFS is ok
[2025-10-13 19:39:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 19:39:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 19:39:10] Further information can be found at the LHC@home message board.
[2025-10-13 19:39:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 19:39:10] Checking for apptainer binary...
[2025-10-13 19:39:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 19:39:10] Running /usr/bin/apptainer --version
[2025-10-13 19:39:10] apptainer version 1.4.1-1.1
[2025-10-13 19:39:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 19:39:11] atlasA115
[2025-10-13 19:39:11] apptainer works
[2025-10-13 19:39:11] Set ATHENA_PROC_NUMBER=3
[2025-10-13 19:39:11] Set ATHENA_CORE_NUMBER=3
[2025-10-13 19:39:11] Starting ATLAS job with PandaID=6840970467
[2025-10-13 19:39:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 21:05:28]  *** The last 200 lines of the pilot log: ***
[2025-10-13 21:05:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 21:05:28]  replicas=None
[2025-10-13 21:05:28]  scope=mc23_13p6TeV
[2025-10-13 21:05:28]  status=None
[2025-10-13 21:05:28]  status_code=0
[2025-10-13 21:05:28]  storage_token=
[2025-10-13 21:05:28]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6840970467/log.46676269._092804.job.log.tgz.1
[2025-10-13 21:05:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4f/de/log.46676269._092804.job.log.tgz.1
[2025-10-13 21:05:28]  workdir=None
[2025-10-13 21:05:28] ]
[2025-10-13 21:05:28] 2025-10-13 19:04:15,922 | INFO     | transferring file log.46676269._092804.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6840970467/log.46676269._092804.job.log.tgz.1 to /local/data/boinc/
[2025-10-13 21:05:28] 2025-10-13 19:04:15,922 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6840970467/log.46676269._092804.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0928
[2025-10-13 21:05:28] 2025-10-13 19:04:15,934 | INFO     | adding to output.list: log.46676269._092804.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4f/de/log.46676269._092804.job.log.tg
[2025-10-13 21:05:28] 2025-10-13 19:04:15,935 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 21:05:28] 2025-10-13 19:04:15,935 | INFO     | summary of transferred files:
[2025-10-13 21:05:28] 2025-10-13 19:04:15,935 | INFO     |  -- lfn=log.46676269._092804.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 21:05:28] 2025-10-13 19:04:15,935 | INFO     | stage-out finished correctly
[2025-10-13 21:05:28] 2025-10-13 19:04:15,965 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 21:05:28] 2025-10-13 19:04:16,492 | INFO     | time since job start (5100s) is within the limit (172800.0s)
[2025-10-13 21:05:28] 2025-10-13 19:04:17,532 | INFO     | job 6840970467 has state=finished
[2025-10-13 21:05:28] 2025-10-13 19:04:17,532 | INFO     | preparing for final server update for job 6840970467 in state='finished'
[2025-10-13 21:05:28] 2025-10-13 19:04:17,533 | INFO     | this job has now completed (state=finished)
[2025-10-13 21:05:28] 2025-10-13 19:04:17,533 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 21:05:28] 2025-10-13 19:04:17,533 | INFO     | log transfer has been attempted: DONE
[2025-10-13 21:05:28] 2025-10-13 19:04:17,533 | INFO     | job 6840970467 has finished - writing final server update
[2025-10-13 21:05:28] 2025-10-13 19:04:17,533 | INFO     | total number of processed events: 400 (read)
[2025-10-13 21:05:28] 2025-10-13 19:04:17,534 | INFO     | executing command: lscpu
[2025-10-13 21:05:28] 2025-10-13 19:04:17,549 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 21:05:28] 2025-10-13 19:04:17,938 | WARNING  | process 3867694 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 21:05:28] 2025-10-13 19:04:17,938 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6840970467/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 21:05:28] 2025-10-13 19:04:17,979 | INFO     | number of running child processes to parent process 3867694: 1
[2025-10-13 21:05:28] 2025-10-13 19:04:17,979 | INFO     | maximum number of monitored processes: 6
[2025-10-13 21:05:28] 2025-10-13 19:04:18,498 | INFO     | time since job start (5102s) is within the limit (172800.0s)
[2025-10-13 21:05:28] 2025-10-13 19:04:20,482 | INFO     | monitor loop #392: job 0:6840970467 is in state 'finished'
[2025-10-13 21:05:28] 2025-10-13 19:04:20,482 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 21:05:28] 2025-10-13 19:04:20,503 | INFO     | time since job start (5104s) is within the limit (172800.0s)
[2025-10-13 21:05:28] 2025-10-13 19:04:21,351 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 21:05:28] 2025-10-13 19:04:21,352 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3432.39725
[2025-10-13 21:05:28] 2025-10-13 19:04:21,353 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6840970467/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 21:05:28] 2025-10-13 19:04:21,353 | INFO     | extracted standard info from prmon json
[2025-10-13 21:05:28] 2025-10-13 19:04:21,353 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 21:05:28] 2025-10-13 19:04:21,354 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 21:05:28] 2025-10-13 19:04:21,354 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 21:05:28] 2025-10-13 19:04:21,354 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 21:05:28] 2025-10-13 19:04:21,354 | INFO     | fitting pss+swap vs Time
[2025-10-13 21:05:28] 2025-10-13 19:04:21,354 | INFO     | sum of square deviations: 141539398.0
[2025-10-13 21:05:28] 2025-10-13 19:04:21,355 | INFO     | sum of deviations: -10295602814.0
[2025-10-13 21:05:28] 2025-10-13 19:04:21,355 | INFO     | mean x: 1760379799.0
[2025-10-13 21:05:28] 2025-10-13 19:04:21,355 | INFO     | mean y: 2441861.922077922
[2025-10-13 21:05:28] 2025-10-13 19:04:21,355 | INFO     | -- intersect: 128052804293.82358
[2025-10-13 21:05:28] 2025-10-13 19:04:21,355 | INFO     | intersect: 128052804293.82358
[2025-10-13 21:05:28] 2025-10-13 19:04:21,355 | INFO     | chi2: 0.0956528559587712
[2025-10-13 21:05:28] 2025-10-13 19:04:21,355 | INFO     | -- intersect: 128052804293.82358
[2025-10-13 21:05:28] 2025-10-13 19:04:21,355 | INFO     | current memory leak: -72.74 B/s (using 77 data points, chi2=0.10)
[2025-10-13 21:05:28] 2025-10-13 19:04:21,355 | INFO     | could have reported an average CPU frequency of 3722 MHz (6 samples)
[2025-10-13 21:05:28] 2025-10-13 19:04:21,355 | INFO     | ..............................
[2025-10-13 21:05:28] 2025-10-13 19:04:21,355 | INFO     | . Timing measurements:
[2025-10-13 21:05:28] 2025-10-13 19:04:21,355 | INFO     | . get job = 0 s
[2025-10-13 21:05:28] 2025-10-13 19:04:21,355 | INFO     | . initial setup = 1 s
[2025-10-13 21:05:28] 2025-10-13 19:04:21,355 | INFO     | . payload setup = 2 s
[2025-10-13 21:05:28] 2025-10-13 19:04:21,355 | INFO     | . stage-in = 0 s
[2025-10-13 21:05:28] 2025-10-13 19:04:21,355 | INFO     | . payload execution = 5079 s
[2025-10-13 21:05:28] 2025-10-13 19:04:21,355 | INFO     | . stage-out = 0 s
[2025-10-13 21:05:28] 2025-10-13 19:04:21,355 | INFO     | . log creation = 0 s
[2025-10-13 21:05:28] 2025-10-13 19:04:21,355 | INFO     | ..............................
[2025-10-13 21:05:28] 2025-10-13 19:04:21,385 | INFO     | 
[2025-10-13 21:05:28] 2025-10-13 19:04:21,385 | INFO     | job summary report
[2025-10-13 21:05:28] 2025-10-13 19:04:21,385 | INFO     | --------------------------------------------------
[2025-10-13 21:05:28] 2025-10-13 19:04:21,385 | INFO     | PanDA job id: 6840970467
[2025-10-13 21:05:28] 2025-10-13 19:04:21,385 | INFO     | task id: 46676269
[2025-10-13 21:05:28] 2025-10-13 19:04:21,385 | INFO     | errors: (none)
[2025-10-13 21:05:28] 2025-10-13 19:04:21,385 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 21:05:28] 2025-10-13 19:04:21,385 | INFO     | pilot state: finished 
[2025-10-13 21:05:28] 2025-10-13 19:04:21,386 | INFO     | transexitcode: 0
[2025-10-13 21:05:28] 2025-10-13 19:04:21,386 | INFO     | exeerrorcode: 0
[2025-10-13 21:05:28] 2025-10-13 19:04:21,386 | INFO     | exeerrordiag: 
[2025-10-13 21:05:28] 2025-10-13 19:04:21,386 | INFO     | exitcode: 0
[2025-10-13 21:05:28] 2025-10-13 19:04:21,386 | INFO     | exitmsg: OK
[2025-10-13 21:05:28] 2025-10-13 19:04:21,386 | INFO     | cpuconsumptiontime: 14610 s
[2025-10-13 21:05:28] 2025-10-13 19:04:21,386 | INFO     | nevents: 400
[2025-10-13 21:05:28] 2025-10-13 19:04:21,386 | INFO     | neventsw: 0
[2025-10-13 21:05:28] 2025-10-13 19:04:21,386 | INFO     | pid: 3867694
[2025-10-13 21:05:28] 2025-10-13 19:04:21,386 | INFO     | pgrp: 3867694
[2025-10-13 21:05:28] 2025-10-13 19:04:21,386 | INFO     | corecount: 3
[2025-10-13 21:05:28] 2025-10-13 19:04:21,386 | INFO     | event service: False
[2025-10-13 21:05:28] 2025-10-13 19:04:21,386 | INFO     | sizes: {0: 2348809, 2: 2349071, 11: 2349099, 5086: 2384574, 5092: 2384712}
[2025-10-13 21:05:28] 2025-10-13 19:04:21,386 | INFO     | --------------------------------------------------
[2025-10-13 21:05:28] 2025-10-13 19:04:21,386 | INFO     | 
[2025-10-13 21:05:28] 2025-10-13 19:04:21,386 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-13 21:05:28] 2025-10-13 19:04:21,397 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 21:05:28] 2025-10-13 19:04:21,397 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 21:05:28] 2025-10-13 19:04:21,397 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 21:05:28] 2025-10-13 19:04:21,397 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 21:05:28] 2025-10-13 19:04:21,397 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 21:05:28] 2025-10-13 19:04:21,397 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 21:05:28] 2025-10-13 19:04:21,397 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 21:05:28] 2025-10-13 19:04:21,397 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 21:05:28] 2025-10-13 19:04:21,397 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 21:05:28] 2025-10-13 19:04:21,397 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 21:05:28] 2025-10-13 19:04:21,397 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 21:05:28] 2025-10-13 19:04:21,397 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 21:05:28] 2025-10-13 19:04:21,398 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 21:05:28] 2025-10-13 19:04:21,398 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 21:05:28] 2025-10-13 19:04:21,398 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 21:05:28] 2025-10-13 19:04:21,398 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 21:05:28] 2025-10-13 19:04:21,398 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 21:05:28] 2025-10-13 19:04:21,398 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 21:05:28] 2025-10-13 19:04:21,398 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 21:05:28] 2025-10-13 19:04:21,398 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 21:05:28] 2025-10-13 19:04:21,398 | INFO     | job 6840970467 has completed (purged errors)
[2025-10-13 21:05:28] 2025-10-13 19:04:21,398 | INFO     | overall cleanup function is called
[2025-10-13 21:05:28] 2025-10-13 19:04:22,404 | INFO     | --- collectZombieJob: --- 10, [3867694]
[2025-10-13 21:05:28] 2025-10-13 19:04:22,404 | INFO     | zombie collector waiting for pid 3867694
[2025-10-13 21:05:28] 2025-10-13 19:04:22,404 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 21:05:28] 2025-10-13 19:04:22,404 | INFO     | collected zombie processes
[2025-10-13 21:05:28] 2025-10-13 19:04:22,404 | INFO     | will attempt to kill all subprocesses of pid=3867694
[2025-10-13 21:05:28] 2025-10-13 19:04:22,447 | INFO     | process IDs to be killed: [3867694] (in reverse order)
[2025-10-13 21:05:28] 2025-10-13 19:04:22,471 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 21:05:28] 2025-10-13 19:04:22,471 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 21:05:28] 2025-10-13 19:04:22,472 | INFO     | did not find any defunct processes belonging to 3867694
[2025-10-13 21:05:28] 2025-10-13 19:04:22,473 | INFO     | did not find any defunct processes belonging to 3867694
[2025-10-13 21:05:28] 2025-10-13 19:04:22,473 | INFO     | ready for new job
[2025-10-13 21:05:28] 2025-10-13 19:04:22,473 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 21:05:28] 2025-10-13 19:04:22,474 | INFO     | ***************************************
[2025-10-13 21:05:28] 2025-10-13 19:04:22,474 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 21:05:28] 2025-10-13 19:04:22,474 | INFO     | ***************************************
[2025-10-13 21:05:28] 2025-10-13 19:04:22,474 | INFO     | 
[2025-10-13 21:05:28] 2025-10-13 19:04:22,474 | INFO     | architecture information:
[2025-10-13 21:05:28] 2025-10-13 19:04:22,474 | INFO     | executing command: cat /etc/os-release
[2025-10-13 21:05:28] 2025-10-13 19:04:22,483 | INFO     | cat /etc/os-release:
[2025-10-13 21:05:28] NAME="CentOS Linux"
[2025-10-13 21:05:28] VERSION="7 (Core)"
[2025-10-13 21:05:28] ID="centos"
[2025-10-13 21:05:28] ID_LIKE="rhel fedora"
[2025-10-13 21:05:28] VERSION_ID="7"
[2025-10-13 21:05:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 21:05:28] ANSI_COLOR="0;31"
[2025-10-13 21:05:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 21:05:28] HOME_URL="https://www.centos.org/"
[2025-10-13 21:05:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 21:05:28] 
[2025-10-13 21:05:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 21:05:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 21:05:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 21:05:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 21:05:28] 
[2025-10-13 21:05:28] 2025-10-13 19:04:22,483 | INFO     | ***************************************
[2025-10-13 21:05:28] 2025-10-13 19:04:22,987 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 21:05:28] 2025-10-13 19:04:23,000 | INFO     | sufficient remaining disk space (357805588480 B)
[2025-10-13 21:05:28] 2025-10-13 19:04:23,000 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 21:05:28] 2025-10-13 19:04:23,000 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 21:05:28] 2025-10-13 19:04:23,000 | INFO     | update_server=False
[2025-10-13 21:05:28] 2025-10-13 19:04:23,000 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 21:05:28] 2025-10-13 19:04:23,000 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:05:28] 2025-10-13 19:04:23,362 | INFO     | all payload control threads have been joined
[2025-10-13 21:05:28] 2025-10-13 19:04:23,868 | INFO     | all data control threads have been joined
[2025-10-13 21:05:28] 2025-10-13 19:04:23,977 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 21:05:28] 2025-10-13 19:04:23,991 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:05:28] 2025-10-13 19:04:23,991 | INFO     | aborting loop
[2025-10-13 21:05:28] 2025-10-13 19:04:24,006 | INFO     | [job] retrieve thread has finished
[2025-10-13 21:05:28] 2025-10-13 19:04:24,006 | INFO     | [job] queue monitor thread has finished
[2025-10-13 21:05:28] 2025-10-13 19:04:24,368 | INFO     | [payload] control thread has finished
[2025-10-13 21:05:28] 2025-10-13 19:04:24,420 | INFO     | [payload] validate_post thread has finished
[2025-10-13 21:05:28] 2025-10-13 19:04:24,464 | INFO     | all job control threads have been joined
[2025-10-13 21:05:28] 2025-10-13 19:04:24,533 | INFO     | [data] copytool_in thread has finished
[2025-10-13 21:05:28] 2025-10-13 19:04:24,644 | INFO     | [payload] failed_post thread has finished
[2025-10-13 21:05:28] 2025-10-13 19:04:24,874 | INFO     | [data] control thread has finished
[2025-10-13 21:05:28] 2025-10-13 19:04:24,997 | INFO     | [job] job monitor thread has finished
[2025-10-13 21:05:28] 2025-10-13 19:04:25,048 | INFO     | [job] validate thread has finished
[2025-10-13 21:05:28] 2025-10-13 19:04:25,164 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 21:05:28] 2025-10-13 19:04:25,176 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 21:05:28] 2025-10-13 19:04:25,395 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 21:05:28] 2025-10-13 19:04:25,470 | INFO     | [job] control thread has finished
[2025-10-13 21:05:28] 2025-10-13 19:04:25,983 | INFO     | [data] copytool_out thread has finished
[2025-10-13 21:05:28] 2025-10-13 19:04:26,503 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 21:05:28] 2025-10-13 19:04:30,510 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 21:05:28] 2025-10-13 19:04:33,086 | INFO     | job.realtimelogging is not enabled
[2025-10-13 21:05:28] 2025-10-13 19:04:34,092 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 21:05:28] 2025-10-13 19:04:53,619 | INFO     | PID=3861260 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 21:05:28] 2025-10-13 19:04:53,620 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 21:05:28] 2025-10-13 19:04:53,620 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 21:05:28] 2025-10-13 19:04:53,620 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 21:05:28] 2025-10-13 19:05:21,891 | INFO     | [monitor] cgroup control has ended
[2025-10-13 21:05:28] 2025-10-13 19:05:23,457 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140602697234240)>', '<ExcThread(monitor, started 140602408662784)>']
[2025-10-13 21:05:28] 2025-10-13 19:05:23,777 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 21:05:28] 2025-10-13 19:05:23,778 | INFO     | [monitor] control thread has ended
[2025-10-13 21:05:28] 2025-10-13 19:05:28,475 | INFO     | all workflow threads have been joined
[2025-10-13 21:05:28] 2025-10-13 19:05:28,475 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 21:05:28] 2025-10-13 19:05:28,476 | INFO     | traces error code: 0
[2025-10-13 21:05:28] 2025-10-13 19:05:28,476 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 21:05:28] 2025-10-13 19:05:28,527 [wrapper] ==== pilot stdout END ====
[2025-10-13 21:05:28] 2025-10-13 19:05:28,530 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 21:05:28] 2025-10-13 19:05:28,532 [wrapper] pilotpid: 3861260
[2025-10-13 21:05:28] 2025-10-13 19:05:28,534 [wrapper] Pilot exit status: 0
[2025-10-13 21:05:28] 2025-10-13 19:05:28,541 [wrapper] pandaids: 6840970467
[2025-10-13 21:05:28] 2025-10-13 19:05:28,557 [wrapper] cleanup supervisor_pilot 3879856 3861261
[2025-10-13 21:05:28] 2025-10-13 19:05:28,560 [wrapper] Test setup, not cleaning
[2025-10-13 21:05:28] 2025-10-13 19:05:28,562 [wrapper] apfmon messages muted
[2025-10-13 21:05:28] 2025-10-13 19:05:28,564 [wrapper] ==== wrapper stdout END ====
[2025-10-13 21:05:28] 2025-10-13 19:05:28,567 [wrapper] ==== wrapper stderr END ====
[2025-10-13 21:05:28]  *** Error codes and diagnostics ***
[2025-10-13 21:05:28]     "exeErrorCode": 0,
[2025-10-13 21:05:28]     "exeErrorDiag": "",
[2025-10-13 21:05:28]     "pilotErrorCode": 0,
[2025-10-13 21:05:28]     "pilotErrorDiag": "",
[2025-10-13 21:05:28]  *** Listing of results directory ***
[2025-10-13 21:05:28] total 408712
[2025-10-13 21:05:28] -rw-r--r-- 1 boinc boinc    557409 Oct 13 02:02 pilot3.tar.gz
[2025-10-13 21:05:28] -rwx------ 1 boinc boinc     36292 Oct 13 02:06 runpilot2-wrapper.sh
[2025-10-13 21:05:28] -rw-r--r-- 1 boinc boinc      5112 Oct 13 02:06 queuedata.json
[2025-10-13 21:05:28] -rw-r--r-- 1 boinc boinc       100 Oct 13 19:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 21:05:28] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 19:39 run_atlas
[2025-10-13 21:05:28] -rw-r--r-- 1 boinc boinc       105 Oct 13 19:39 job.xml
[2025-10-13 21:05:28] -rw-r--r-- 2 boinc boinc 218298937 Oct 13 19:39 EVNT.46676267._004681.pool.root.1
[2025-10-13 21:05:28] -rw-r--r-- 2 boinc boinc    569676 Oct 13 19:39 input.tar.gz
[2025-10-13 21:05:28] -rw-r--r-- 2 boinc boinc     15120 Oct 13 19:39 start_atlas.sh
[2025-10-13 21:05:28] drwxrwx--x 2 boinc boinc      4096 Oct 13 19:39 shared
[2025-10-13 21:05:28] -rw-r--r-- 1 boinc boinc         0 Oct 13 19:39 boinc_setup_complete
[2025-10-13 21:05:28] -rw-r--r-- 1 boinc boinc      6441 Oct 13 19:39 init_data.xml
[2025-10-13 21:05:28] -rw-r--r-- 1 boinc boinc         0 Oct 13 19:39 boinc_lockfile
[2025-10-13 21:05:28] -rw-r--r-- 1 boinc boinc      2549 Oct 13 19:39 pandaJob.out
[2025-10-13 21:05:28] -rw------- 1 boinc boinc    972791 Oct 13 19:39 agis_schedconf.cvmfs.json
[2025-10-13 21:05:28] -rw------- 1 boinc boinc   1560580 Oct 13 19:39 agis_ddmendpoints.agis.ALL.json
[2025-10-13 21:05:28] drwx------ 5 boinc boinc      4096 Oct 13 19:39 pilot3
[2025-10-13 21:05:28] -rw------- 1 boinc boinc 194314124 Oct 13 21:03 HITS.46676269._092804.pool.root.1
[2025-10-13 21:05:28] -rw-r--r-- 1 boinc boinc       529 Oct 13 21:04 boinc_task_state.xml
[2025-10-13 21:05:28] -rw------- 1 boinc boinc      1016 Oct 13 21:04 memory_monitor_summary.json
[2025-10-13 21:05:28] -rw------- 1 boinc boinc    255671 Oct 13 21:04 log.46676269._092804.job.log.tgz.1
[2025-10-13 21:05:28] -rw------- 1 boinc boinc      7763 Oct 13 21:04 heartbeat.json
[2025-10-13 21:05:28] -rw------- 1 boinc boinc        95 Oct 13 21:04 pilot_heartbeat.json
[2025-10-13 21:05:28] -rw-r--r-- 1 boinc boinc      8192 Oct 13 21:05 boinc_mmap_file
[2025-10-13 21:05:28] -rw-r--r-- 1 boinc boinc        27 Oct 13 21:05 wrapper_checkpoint.txt
[2025-10-13 21:05:28] -rw------- 1 boinc boinc      4824 Oct 13 21:05 pilotlog.txt
[2025-10-13 21:05:28] -rw------- 1 boinc boinc    747255 Oct 13 21:05 log.46676269._092804.job.log.1
[2025-10-13 21:05:28] -rw------- 1 boinc boinc       357 Oct 13 21:05 output.list
[2025-10-13 21:05:28] -rw-r--r-- 1 boinc boinc       620 Oct 13 21:05 runtime_log
[2025-10-13 21:05:28] -rw------- 1 boinc boinc   1024000 Oct 13 21:05 result.tar.gz
[2025-10-13 21:05:28] -rw-r--r-- 1 boinc boinc      8792 Oct 13 21:05 runtime_log.err
[2025-10-13 21:05:28] -rw------- 1 boinc boinc       661 Oct 13 21:05 6POODmfGLS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmvKVMDmBD3Uym.diag
[2025-10-13 21:05:28] -rw-r--r-- 1 boinc boinc     21823 Oct 13 21:05 stderr.txt
[2025-10-13 21:05:28] HITS file was successfully produced:
[2025-10-13 21:05:28] -rw------- 1 boinc boinc 194314124 Oct 13 21:03 shared/HITS.pool.root.1
[2025-10-13 21:05:28]  *** Contents of shared directory: ***
[2025-10-13 21:05:28] total 404528
[2025-10-13 21:05:28] -rw-r--r-- 2 boinc boinc 218298937 Oct 13 19:39 ATLAS.root_0
[2025-10-13 21:05:28] -rw-r--r-- 2 boinc boinc    569676 Oct 13 19:39 input.tar.gz
[2025-10-13 21:05:28] -rw-r--r-- 2 boinc boinc     15120 Oct 13 19:39 start_atlas.sh
[2025-10-13 21:05:28] -rw------- 1 boinc boinc 194314124 Oct 13 21:03 HITS.pool.root.1
[2025-10-13 21:05:28] -rw------- 1 boinc boinc   1024000 Oct 13 21:05 result.tar.gz
21:05:29 (3857545): run_atlas exited; CPU time 14627.497892
21:05:29 (3857545): called boinc_finish(0)

</stderr_txt>
]]>

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