Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:48:02 (672325): wrapper (7.7.26015): starting
23:48:02 (672325): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 23:48:02] Arguments: --nthreads 9
[2025-10-12 23:48:02] Threads: 9
[2025-10-12 23:48:02] Checking for CVMFS
[2025-10-12 23:48:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 23:48:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 23:48:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 23:48:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 23:48:03] 2.13.2.0 4486 36527 393152 151647 1 74 28640415 39288833 10769 16776704 0 60478143 99.521 73563366 31408 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 23:48:03] CVMFS is ok
[2025-10-12 23:48:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 23:48:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 23:48:03] Further information can be found at the LHC@home message board.
[2025-10-12 23:48:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 23:48:03] Checking for apptainer binary...
[2025-10-12 23:48:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 23:48:03] Running /usr/bin/apptainer --version
[2025-10-12 23:48:03] apptainer version 1.4.3-1.el9
[2025-10-12 23:48:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 23:48:03] c-211-25.aglt2.org
[2025-10-12 23:48:03] apptainer works
[2025-10-12 23:48:03] Set ATHENA_PROC_NUMBER=9
[2025-10-12 23:48:03] Set ATHENA_CORE_NUMBER=9
[2025-10-12 23:48:03] Starting ATLAS job with PandaID=6840834749
[2025-10-12 23:48:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 14:42:23]  *** The last 200 lines of the pilot log: ***
[2025-10-13 14:42:23] 2025-10-13 18:41:22,572 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 14:42:23] 2025-10-13 18:41:22,572 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 14:42:23] 2025-10-13 18:41:22,622 | INFO     | fitting pss+swap vs Time
[2025-10-13 14:42:23] 2025-10-13 18:41:22,624 | INFO     | sum of square deviations: 209152684547.439
[2025-10-13 14:42:23] 2025-10-13 18:41:22,769 | INFO     | sum of deviations: 95830758207.12985
[2025-10-13 14:42:23] 2025-10-13 18:41:22,769 | INFO     | mean x: 1760354059.0421894
[2025-10-13 14:42:23] 2025-10-13 18:41:22,769 | INFO     | mean y: 2558897.8072976056
[2025-10-13 14:42:23] 2025-10-13 18:41:22,769 | INFO     | -- intersect: -804010066.6601359
[2025-10-13 14:42:23] 2025-10-13 18:41:22,769 | INFO     | intersect: -804010066.6601359
[2025-10-13 14:42:23] 2025-10-13 18:41:22,777 | INFO     | chi2: 2.339220280045708
[2025-10-13 14:42:23] 2025-10-13 18:41:22,780 | INFO     | sum of square deviations: 205595750204.256
[2025-10-13 14:42:23] 2025-10-13 18:41:22,867 | INFO     | sum of deviations: 149141997204.9792
[2025-10-13 14:42:23] 2025-10-13 18:41:22,867 | INFO     | mean x: 1760353906.5447247
[2025-10-13 14:42:23] 2025-10-13 18:41:22,867 | INFO     | mean y: 2561172.538990826
[2025-10-13 14:42:23] 2025-10-13 18:41:22,867 | INFO     | -- intersect: -1274423868.0021472
[2025-10-13 14:42:23] 2025-10-13 18:41:22,878 | INFO     | intersect: -1274423868.0021472
[2025-10-13 14:42:23] 2025-10-13 18:41:22,879 | INFO     | chi2: 1.6507824137292137
[2025-10-13 14:42:23] 2025-10-13 18:41:22,880 | INFO     | current chi2=1.6507824137292137 (change=29.430228191380177 %)
[2025-10-13 14:42:23] 2025-10-13 18:41:22,923 | INFO     | sum of square deviations: 202079374151.06088
[2025-10-13 14:42:23] 2025-10-13 18:41:23,014 | INFO     | sum of deviations: 147466043865.9111
[2025-10-13 14:42:23] 2025-10-13 18:41:23,015 | INFO     | mean x: 1760353754.0472896
[2025-10-13 14:42:23] 2025-10-13 18:41:23,015 | INFO     | mean y: 2561099.855824683
[2025-10-13 14:42:23] 2025-10-13 18:41:23,015 | INFO     | -- intersect: -1282045035.750104
[2025-10-13 14:42:23] 2025-10-13 18:41:23,015 | INFO     | intersect: -1282045035.750104
[2025-10-13 14:42:23] 2025-10-13 18:41:23,016 | INFO     | chi2: 1.6508468896987447
[2025-10-13 14:42:23] 2025-10-13 18:41:23,017 | INFO     | current chi2=1.6508468896987447 (change=-0.00390578243351338 %)
[2025-10-13 14:42:23] 2025-10-13 18:41:23,017 | INFO     | right removable region: 866
[2025-10-13 14:42:23] 2025-10-13 18:41:23,024 | INFO     | sum of square deviations: 205595353031.97705
[2025-10-13 14:42:23] 2025-10-13 18:41:23,095 | INFO     | sum of deviations: -35877440187.357765
[2025-10-13 14:42:23] 2025-10-13 18:41:23,095 | INFO     | mean x: 1760354211.548165
[2025-10-13 14:42:23] 2025-10-13 18:41:23,095 | INFO     | mean y: 2564528.651376147
[2025-10-13 14:42:23] 2025-10-13 18:41:23,096 | INFO     | -- intersect: 309755338.18080926
[2025-10-13 14:42:23] 2025-10-13 18:41:23,096 | INFO     | intersect: 309755338.18080926
[2025-10-13 14:42:23] 2025-10-13 18:41:23,097 | INFO     | chi2: 0.9507379468136623
[2025-10-13 14:42:23] 2025-10-13 18:41:23,097 | INFO     | current chi2=0.9507379468136623 (change=59.356630287290216 %)
[2025-10-13 14:42:23] 2025-10-13 18:41:23,108 | INFO     | sum of square deviations: 202078633365.5595
[2025-10-13 14:42:23] 2025-10-13 18:41:23,170 | INFO     | sum of deviations: -26297417747.201836
[2025-10-13 14:42:23] 2025-10-13 18:41:23,170 | INFO     | mean x: 1760354364.0530565
[2025-10-13 14:42:23] 2025-10-13 18:41:23,170 | INFO     | mean y: 2564111.547866205
[2025-10-13 14:42:23] 2025-10-13 18:41:23,172 | INFO     | -- intersect: 231647084.4659856
[2025-10-13 14:42:23] 2025-10-13 18:41:23,172 | INFO     | intersect: 231647084.4659856
[2025-10-13 14:42:23] 2025-10-13 18:41:23,173 | INFO     | chi2: 0.9357097797532158
[2025-10-13 14:42:23] 2025-10-13 18:41:23,173 | INFO     | current chi2=0.9357097797532158 (change=1.5806844683976762 %)
[2025-10-13 14:42:23] 2025-10-13 18:41:23,173 | INFO     | left removable region: 20
[2025-10-13 14:42:23] 2025-10-13 18:41:23,175 | INFO     | sum of square deviations: 187747225484.30392
[2025-10-13 14:42:23] 2025-10-13 18:41:23,217 | INFO     | sum of deviations: 120593891961.10394
[2025-10-13 14:42:23] 2025-10-13 18:41:23,217 | INFO     | mean x: 1760354333.5614657
[2025-10-13 14:42:23] 2025-10-13 18:41:23,217 | INFO     | mean y: 2562104.6903073285
[2025-10-13 14:42:23] 2025-10-13 18:41:23,218 | INFO     | -- intersect: -1128149573.030439
[2025-10-13 14:42:23] 2025-10-13 18:41:23,218 | INFO     | intersect: -1128149573.030439
[2025-10-13 14:42:23] 2025-10-13 18:41:23,219 | INFO     | chi2: 0.028821500400580374
[2025-10-13 14:42:23] 2025-10-13 18:41:23,219 | INFO     | -- intersect: -1128149573.030439
[2025-10-13 14:42:23] 2025-10-13 18:41:23,220 | INFO     | current memory leak: 0.64 B/s (using 846 data points, chi2=0.03)
[2025-10-13 14:42:23] 2025-10-13 18:41:23,221 | INFO     | could have reported an average CPU frequency of 2899 MHz (32 samples)
[2025-10-13 14:42:23] 2025-10-13 18:41:23,221 | INFO     | ..............................
[2025-10-13 14:42:23] 2025-10-13 18:41:23,221 | INFO     | . Timing measurements:
[2025-10-13 14:42:23] 2025-10-13 18:41:23,221 | INFO     | . get job = 0 s
[2025-10-13 14:42:23] 2025-10-13 18:41:23,221 | INFO     | . initial setup = 3 s
[2025-10-13 14:42:23] 2025-10-13 18:41:23,222 | INFO     | . payload setup = 10 s
[2025-10-13 14:42:23] 2025-10-13 18:41:23,222 | INFO     | . stage-in = 0 s
[2025-10-13 14:42:23] 2025-10-13 18:41:23,222 | INFO     | . payload execution = 53489 s
[2025-10-13 14:42:23] 2025-10-13 18:41:23,222 | INFO     | . stage-out = 4 s
[2025-10-13 14:42:23] 2025-10-13 18:41:23,222 | INFO     | . log creation = 0 s
[2025-10-13 14:42:23] 2025-10-13 18:41:23,222 | INFO     | ..............................
[2025-10-13 14:42:23] 2025-10-13 18:41:23,436 | INFO     | time since job start (53581s) is within the limit (172800.0s)
[2025-10-13 14:42:23] 2025-10-13 18:41:23,731 | INFO     | 
[2025-10-13 14:42:23] 2025-10-13 18:41:23,731 | INFO     | job summary report
[2025-10-13 14:42:23] 2025-10-13 18:41:23,731 | INFO     | --------------------------------------------------
[2025-10-13 14:42:23] 2025-10-13 18:41:23,731 | INFO     | PanDA job id: 6840834749
[2025-10-13 14:42:23] 2025-10-13 18:41:23,731 | INFO     | task id: 46676269
[2025-10-13 14:42:23] 2025-10-13 18:41:23,732 | INFO     | errors: (none)
[2025-10-13 14:42:23] 2025-10-13 18:41:23,732 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 14:42:23] 2025-10-13 18:41:23,732 | INFO     | pilot state: finished 
[2025-10-13 14:42:23] 2025-10-13 18:41:23,732 | INFO     | transexitcode: 0
[2025-10-13 14:42:23] 2025-10-13 18:41:23,732 | INFO     | exeerrorcode: 0
[2025-10-13 14:42:23] 2025-10-13 18:41:23,732 | INFO     | exeerrordiag: 
[2025-10-13 14:42:23] 2025-10-13 18:41:23,732 | INFO     | exitcode: 0
[2025-10-13 14:42:23] 2025-10-13 18:41:23,733 | INFO     | exitmsg: OK
[2025-10-13 14:42:23] 2025-10-13 18:41:23,733 | INFO     | cpuconsumptiontime: 78595 s
[2025-10-13 14:42:23] 2025-10-13 18:41:23,733 | INFO     | nevents: 400
[2025-10-13 14:42:23] 2025-10-13 18:41:23,733 | INFO     | neventsw: 0
[2025-10-13 14:42:23] 2025-10-13 18:41:23,733 | INFO     | pid: 691165
[2025-10-13 14:42:23] 2025-10-13 18:41:23,733 | INFO     | pgrp: 691165
[2025-10-13 14:42:23] 2025-10-13 18:41:23,733 | INFO     | corecount: 9
[2025-10-13 14:42:23] 2025-10-13 18:41:23,734 | INFO     | event service: False
[2025-10-13 14:42:23] 2025-10-13 18:41:23,734 | INFO     | sizes: {0: 2348686, 1: 2348885, 8: 2349147, 12: 2349175, 53507: 2396611, 53508: 2396610, 53513: 2405792, 53515: 2405848, 53561: 2406042}
[2025-10-13 14:42:23] 2025-10-13 18:41:23,734 | INFO     | --------------------------------------------------
[2025-10-13 14:42:23] 2025-10-13 18:41:23,734 | INFO     | 
[2025-10-13 14:42:23] 2025-10-13 18:41:23,734 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-13 14:42:23] 2025-10-13 18:41:23,830 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 14:42:23] 2025-10-13 18:41:23,831 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 14:42:23] 2025-10-13 18:41:23,831 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 14:42:23] 2025-10-13 18:41:23,831 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 14:42:23] 2025-10-13 18:41:23,831 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 14:42:23] 2025-10-13 18:41:23,831 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 14:42:23] 2025-10-13 18:41:23,831 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 14:42:23] 2025-10-13 18:41:23,832 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 14:42:23] 2025-10-13 18:41:23,832 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 14:42:23] 2025-10-13 18:41:23,832 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 14:42:23] 2025-10-13 18:41:23,832 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 14:42:23] 2025-10-13 18:41:23,832 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 14:42:23] 2025-10-13 18:41:23,833 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 14:42:23] 2025-10-13 18:41:23,833 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 14:42:23] 2025-10-13 18:41:23,833 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 14:42:23] 2025-10-13 18:41:23,833 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 14:42:23] 2025-10-13 18:41:23,833 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 14:42:23] 2025-10-13 18:41:23,833 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 14:42:23] 2025-10-13 18:41:23,837 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 14:42:23] 2025-10-13 18:41:23,837 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 14:42:23] 2025-10-13 18:41:23,837 | INFO     | job 6840834749 has completed (purged errors)
[2025-10-13 14:42:23] 2025-10-13 18:41:23,838 | INFO     | overall cleanup function is called
[2025-10-13 14:42:23] 2025-10-13 18:41:24,855 | INFO     | --- collectZombieJob: --- 10, [691165]
[2025-10-13 14:42:23] 2025-10-13 18:41:24,855 | INFO     | zombie collector waiting for pid 691165
[2025-10-13 14:42:23] 2025-10-13 18:41:24,859 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 14:42:23] 2025-10-13 18:41:24,860 | INFO     | collected zombie processes
[2025-10-13 14:42:23] 2025-10-13 18:41:24,860 | INFO     | will attempt to kill all subprocesses of pid=691165
[2025-10-13 14:42:23] 2025-10-13 18:41:26,984 | INFO     | process IDs to be killed: [691165] (in reverse order)
[2025-10-13 14:42:23] 2025-10-13 18:41:27,260 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 14:42:23] 2025-10-13 18:41:27,261 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 14:42:23] 2025-10-13 18:41:27,296 | INFO     | did not find any defunct processes belonging to 691165
[2025-10-13 14:42:23] 2025-10-13 18:41:27,327 | INFO     | did not find any defunct processes belonging to 691165
[2025-10-13 14:42:23] 2025-10-13 18:41:27,327 | INFO     | ready for new job
[2025-10-13 14:42:23] 2025-10-13 18:41:27,332 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 14:42:23] 2025-10-13 18:41:27,341 | INFO     | ***************************************
[2025-10-13 14:42:23] 2025-10-13 18:41:27,341 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 14:42:23] 2025-10-13 18:41:27,341 | INFO     | ***************************************
[2025-10-13 14:42:23] 2025-10-13 18:41:27,342 | INFO     | 
[2025-10-13 14:42:23] 2025-10-13 18:41:27,344 | INFO     | architecture information:
[2025-10-13 14:42:23] 2025-10-13 18:41:27,352 | INFO     | executing command: cat /etc/os-release
[2025-10-13 14:42:23] 2025-10-13 18:41:27,407 | INFO     | cat /etc/os-release:
[2025-10-13 14:42:23] NAME="CentOS Linux"
[2025-10-13 14:42:23] VERSION="7 (Core)"
[2025-10-13 14:42:23] ID="centos"
[2025-10-13 14:42:23] ID_LIKE="rhel fedora"
[2025-10-13 14:42:23] VERSION_ID="7"
[2025-10-13 14:42:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 14:42:23] ANSI_COLOR="0;31"
[2025-10-13 14:42:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 14:42:23] HOME_URL="https://www.centos.org/"
[2025-10-13 14:42:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 14:42:23] 
[2025-10-13 14:42:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 14:42:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 14:42:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 14:42:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 14:42:23] 
[2025-10-13 14:42:23] 2025-10-13 18:41:27,407 | INFO     | ***************************************
[2025-10-13 14:42:23] 2025-10-13 18:41:27,912 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-13 14:42:23] 2025-10-13 18:41:28,017 | INFO     | sufficient remaining disk space (52340719616 B)
[2025-10-13 14:42:23] 2025-10-13 18:41:28,017 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 14:42:23] 2025-10-13 18:41:28,018 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 14:42:23] 2025-10-13 18:41:28,018 | INFO     | update_server=False
[2025-10-13 14:42:23] 2025-10-13 18:41:28,018 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 14:42:23] 2025-10-13 18:41:28,049 | INFO     | all data control threads have been joined
[2025-10-13 14:42:23] 2025-10-13 18:41:28,453 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 14:42:23] 2025-10-13 18:41:28,461 | INFO     | aborting loop
[2025-10-13 14:42:23] 2025-10-13 18:41:28,630 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 14:42:23] 2025-10-13 18:41:28,685 | INFO     | all job control threads have been joined
[2025-10-13 14:42:23] 2025-10-13 18:41:28,851 | INFO     | all payload control threads have been joined
[2025-10-13 14:42:23] 2025-10-13 18:41:28,958 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 14:42:23] 2025-10-13 18:41:29,024 | INFO     | [job] retrieve thread has finished
[2025-10-13 14:42:23] 2025-10-13 18:41:29,055 | INFO     | [data] control thread has finished
[2025-10-13 14:42:23] 2025-10-13 18:41:29,058 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 14:42:23] 2025-10-13 18:41:29,079 | INFO     | [data] copytool_in thread has finished
[2025-10-13 14:42:23] 2025-10-13 18:41:29,097 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 14:42:23] 2025-10-13 18:41:29,174 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 14:42:23] 2025-10-13 18:41:29,468 | INFO     | [job] job monitor thread has finished
[2025-10-13 14:42:23] 2025-10-13 18:41:29,473 | INFO     | [payload] validate_post thread has finished
[2025-10-13 14:42:23] 2025-10-13 18:41:29,670 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 14:42:23] 2025-10-13 18:41:29,691 | INFO     | [job] control thread has finished
[2025-10-13 14:42:23] 2025-10-13 18:41:29,860 | INFO     | [payload] control thread has finished
[2025-10-13 14:42:23] 2025-10-13 18:41:29,883 | INFO     | [payload] failed_post thread has finished
[2025-10-13 14:42:23] 2025-10-13 18:41:29,965 | INFO     | [job] queue monitor thread has finished
[2025-10-13 14:42:23] 2025-10-13 18:41:29,977 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 14:42:23] 2025-10-13 18:41:29,977 | INFO     | [job] validate thread has finished
[2025-10-13 14:42:23] 2025-10-13 18:41:30,652 | INFO     | [data] copytool_out thread has finished
[2025-10-13 14:42:23] 2025-10-13 18:41:33,068 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 14:42:23] 2025-10-13 18:42:00,776 | INFO     | PID=676339 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 14:42:23] 2025-10-13 18:42:00,776 | INFO     | .. there are 22 such processes running
[2025-10-13 14:42:23] 2025-10-13 18:42:00,778 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 14:42:23] 2025-10-13 18:42:00,778 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 14:42:23] 2025-10-13 18:42:00,778 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 14:42:23] 2025-10-13 18:42:14,968 | INFO     | [monitor] cgroup control has ended
[2025-10-13 14:42:23] 2025-10-13 18:42:16,691 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140164971235136)>', '<ExcThread(monitor, started 140164043110144)>']
[2025-10-13 14:42:23] 2025-10-13 18:42:16,906 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 14:42:23] 2025-10-13 18:42:16,906 | INFO     | [monitor] control thread has ended
[2025-10-13 14:42:23] 2025-10-13 18:42:21,717 | INFO     | all workflow threads have been joined
[2025-10-13 14:42:23] 2025-10-13 18:42:21,717 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 14:42:23] 2025-10-13 18:42:21,717 | INFO     | traces error code: 0
[2025-10-13 14:42:23] 2025-10-13 18:42:21,718 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 14:42:23] 2025-10-13 18:42:21,923 [wrapper] ==== pilot stdout END ====
[2025-10-13 14:42:23] 2025-10-13 18:42:21,943 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 14:42:23] 2025-10-13 18:42:21,964 [wrapper] pilotpid: 676339
[2025-10-13 14:42:23] 2025-10-13 18:42:21,986 [wrapper] Pilot exit status: 0
[2025-10-13 14:42:23] 2025-10-13 18:42:22,239 [wrapper] pandaids: 6840834749
[2025-10-13 14:42:23] 2025-10-13 18:42:22,491 [wrapper] cleanup supervisor_pilot 2210472 676340
[2025-10-13 14:42:23] 2025-10-13 18:42:22,508 [wrapper] Test setup, not cleaning
[2025-10-13 14:42:23] 2025-10-13 18:42:22,531 [wrapper] apfmon messages muted
[2025-10-13 14:42:23] 2025-10-13 18:42:22,558 [wrapper] ==== wrapper stdout END ====
[2025-10-13 14:42:23] 2025-10-13 18:42:22,592 [wrapper] ==== wrapper stderr END ====
[2025-10-13 14:42:23]  *** Error codes and diagnostics ***
[2025-10-13 14:42:23]     "exeErrorCode": 0,
[2025-10-13 14:42:23]     "exeErrorDiag": "",
[2025-10-13 14:42:23]     "pilotErrorCode": 0,
[2025-10-13 14:42:23]     "pilotErrorDiag": "",
[2025-10-13 14:42:23]  *** Listing of results directory ***
[2025-10-13 14:42:23] total 418868
[2025-10-13 14:42:23] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 17:31 pilot3.tar.gz
[2025-10-13 14:42:23] -rwx------. 1 boincer umatlas     36292 Oct 12 17:48 runpilot2-wrapper.sh
[2025-10-13 14:42:23] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 17:48 queuedata.json
[2025-10-13 14:42:23] -rw-r--r--. 1 boincer umatlas       100 Oct 12 23:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 14:42:23] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 23:48 run_atlas
[2025-10-13 14:42:23] -rw-r--r--. 1 boincer umatlas       105 Oct 12 23:48 job.xml
[2025-10-13 14:42:23] -rw-r--r--. 2 boincer umatlas 219626182 Oct 12 23:48 EVNT.46676267._004842.pool.root.1
[2025-10-13 14:42:23] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 23:48 start_atlas.sh
[2025-10-13 14:42:23] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 23:48 shared
[2025-10-13 14:42:23] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 23:48 input.tar.gz
[2025-10-13 14:42:23] -rw-r--r--. 1 boincer umatlas         0 Oct 12 23:48 boinc_lockfile
[2025-10-13 14:42:23] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 23:48 pandaJob.out
[2025-10-13 14:42:23] -rw-------. 1 boincer umatlas    974373 Oct 12 23:48 agis_schedconf.cvmfs.json
[2025-10-13 14:42:23] drwx------. 5 boincer umatlas      4096 Oct 12 23:48 pilot3
[2025-10-13 14:42:23] -rw-r--r--. 1 boincer umatlas      6524 Oct 13 14:37 init_data.xml
[2025-10-13 14:42:23] -rw-------. 1 boincer umatlas 192000131 Oct 13 14:38 HITS.46676269._090342.pool.root.1
[2025-10-13 14:42:23] -rw-r--r--. 1 boincer umatlas       531 Oct 13 14:38 boinc_task_state.xml
[2025-10-13 14:42:23] -rw-------. 1 boincer umatlas      1046 Oct 13 14:40 memory_monitor_summary.json
[2025-10-13 14:42:23] -rw-------. 1 boincer umatlas   1560580 Oct 13 14:40 agis_ddmendpoints.agis.ALL.json
[2025-10-13 14:42:23] -rw-------. 1 boincer umatlas    899395 Oct 13 14:40 log.46676269._090342.job.log.tgz.1
[2025-10-13 14:42:23] -rw-------. 1 boincer umatlas      7824 Oct 13 14:41 heartbeat.json
[2025-10-13 14:42:23] -rw-r--r--. 1 boincer umatlas        28 Oct 13 14:41 wrapper_checkpoint.txt
[2025-10-13 14:42:23] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 14:41 boinc_mmap_file
[2025-10-13 14:42:23] -rw-------. 1 boincer umatlas        95 Oct 13 14:42 pilot_heartbeat.json
[2025-10-13 14:42:23] -rw-------. 1 boincer umatlas      4823 Oct 13 14:42 pilotlog.txt
[2025-10-13 14:42:23] -rw-------. 1 boincer umatlas   5796576 Oct 13 14:42 log.46676269._090342.job.log.1
[2025-10-13 14:42:23] -rw-------. 1 boincer umatlas       357 Oct 13 14:42 output.list
[2025-10-13 14:42:23] -rw-r--r--. 1 boincer umatlas       620 Oct 13 14:42 runtime_log
[2025-10-13 14:42:23] -rw-------. 1 boincer umatlas   6717440 Oct 13 14:42 result.tar.gz
[2025-10-13 14:42:23] -rw-------. 1 boincer umatlas       658 Oct 13 14:42 wFLLDmX6IS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUklNDm9boA9n.diag
[2025-10-13 14:42:23] -rw-r--r--. 1 boincer umatlas      8704 Oct 13 14:42 runtime_log.err
[2025-10-13 14:42:23] -rw-r--r--. 1 boincer umatlas     21013 Oct 13 14:42 stderr.txt
[2025-10-13 14:42:24] HITS file was successfully produced:
[2025-10-13 14:42:24] -rw-------. 1 boincer umatlas 192000131 Oct 13 14:38 shared/HITS.pool.root.1
[2025-10-13 14:42:24]  *** Contents of shared directory: ***
[2025-10-13 14:42:24] total 409124
[2025-10-13 14:42:24] -rw-r--r--. 2 boincer umatlas 219626182 Oct 12 23:48 ATLAS.root_0
[2025-10-13 14:42:24] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 23:48 start_atlas.sh
[2025-10-13 14:42:24] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 23:48 input.tar.gz
[2025-10-13 14:42:24] -rw-------. 1 boincer umatlas 192000131 Oct 13 14:38 HITS.pool.root.1
[2025-10-13 14:42:24] -rw-------. 1 boincer umatlas   6717440 Oct 13 14:42 result.tar.gz
14:42:25 (672325): run_atlas exited; CPU time 80972.993027
14:42:25 (672325): called boinc_finish(0)

</stderr_txt>
]]>

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