Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:40:57 (3445753): wrapper (7.7.26015): starting
12:40:57 (3445753): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 12:40:57] Arguments: --nthreads 3
[2025-10-13 12:40:57] Threads: 3
[2025-10-13 12:40:57] Checking for CVMFS
[2025-10-13 12:40:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 12:40:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 12:40:58] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 12:40:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 12:40:58] 2.9.2.0 1692675 5706 86284 151658 0 57 29595926 36864001 0 130560 0 4594886 99.991 193559 876 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 12:40:58] CVMFS is ok
[2025-10-13 12:40:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 12:40:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 12:40:58] Further information can be found at the LHC@home message board.
[2025-10-13 12:40:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 12:40:58] Checking for apptainer binary...
[2025-10-13 12:40:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 12:40:58] Running /usr/bin/apptainer --version
[2025-10-13 12:40:58] apptainer version 1.4.1-1.1
[2025-10-13 12:40:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 12:40:58] thA337a
[2025-10-13 12:40:58] apptainer works
[2025-10-13 12:40:58] Set ATHENA_PROC_NUMBER=3
[2025-10-13 12:40:58] Set ATHENA_CORE_NUMBER=3
[2025-10-13 12:40:58] Starting ATLAS job with PandaID=6840714554
[2025-10-13 12:40:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 14:02:35]  *** The last 200 lines of the pilot log: ***
[2025-10-13 14:02:35] VERSION="7 (Core)"
[2025-10-13 14:02:35] ID="centos"
[2025-10-13 14:02:35] ID_LIKE="rhel fedora"
[2025-10-13 14:02:35] VERSION_ID="7"
[2025-10-13 14:02:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 14:02:35] ANSI_COLOR="0;31"
[2025-10-13 14:02:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 14:02:35] HOME_URL="https://www.centos.org/"
[2025-10-13 14:02:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 14:02:35] 
[2025-10-13 14:02:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 14:02:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 14:02:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 14:02:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 14:02:35] 
[2025-10-13 14:02:35] 2025-10-13 12:02:03,469 | INFO     | ***************************************
[2025-10-13 14:02:35] 2025-10-13 12:02:03,972 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 14:02:35] 2025-10-13 12:02:03,984 | INFO     | sufficient remaining disk space (375734140928 B)
[2025-10-13 14:02:35] 2025-10-13 12:02:03,984 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 14:02:35] 2025-10-13 12:02:03,985 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 14:02:35] 2025-10-13 12:02:03,985 | INFO     | update_server=False
[2025-10-13 14:02:35] 2025-10-13 12:02:03,985 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 14:02:35] 2025-10-13 12:02:03,985 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 14:02:35] 2025-10-13 12:02:03,985 | INFO     | aborting loop
[2025-10-13 14:02:35] 2025-10-13 12:02:03,985 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 14:02:35] 2025-10-13 12:02:03,985 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 14:02:35] 2025-10-13 12:02:04,484 | INFO     | all data control threads have been joined
[2025-10-13 14:02:35] 2025-10-13 12:02:04,597 | INFO     | all payload control threads have been joined
[2025-10-13 14:02:35] 2025-10-13 12:02:04,990 | INFO     | [job] retrieve thread has finished
[2025-10-13 14:02:35] 2025-10-13 12:02:04,991 | INFO     | [job] job monitor thread has finished
[2025-10-13 14:02:35] 2025-10-13 12:02:04,991 | INFO     | [job] queue monitor thread has finished
[2025-10-13 14:02:35] 2025-10-13 12:02:05,005 | INFO     | all job control threads have been joined
[2025-10-13 14:02:35] 2025-10-13 12:02:05,176 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 14:02:35] 2025-10-13 12:02:05,490 | INFO     | [data] control thread has finished
[2025-10-13 14:02:35] 2025-10-13 12:02:05,561 | INFO     | [payload] failed_post thread has finished
[2025-10-13 14:02:35] 2025-10-13 12:02:05,603 | INFO     | [payload] control thread has finished
[2025-10-13 14:02:35] 2025-10-13 12:02:05,816 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 14:02:35] 2025-10-13 12:02:05,991 | INFO     | [data] copytool_out thread has finished
[2025-10-13 14:02:35] 2025-10-13 12:02:06,011 | INFO     | [job] control thread has finished
[2025-10-13 14:02:35] 2025-10-13 12:02:06,094 | INFO     | [data] copytool_in thread has finished
[2025-10-13 14:02:35] 2025-10-13 12:02:06,372 | INFO     | [job] validate thread has finished
[2025-10-13 14:02:35] 2025-10-13 12:02:06,465 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 14:02:35] 2025-10-13 12:02:06,465 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 14:02:35] 2025-10-13 12:02:06,541 | INFO     | [payload] validate_post thread has finished
[2025-10-13 14:02:35] 2025-10-13 12:02:06,595 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 14:02:35] 2025-10-13 12:02:10,434 | INFO     | [monitor] cgroup control has ended
[2025-10-13 14:02:35] 2025-10-13 12:02:10,602 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 14:02:35] 2025-10-13 12:02:12,000 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139662344775488)>', '<ExcThread(monitor, started 139661724870400)>']
[2025-10-13 14:02:35] 2025-10-13 12:02:17,026 | INFO     | all workflow threads have been joined
[2025-10-13 14:02:35] 2025-10-13 12:02:17,026 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 14:02:35] 2025-10-13 12:02:17,026 | INFO     | traces error code: 0
[2025-10-13 14:02:35] 2025-10-13 12:02:17,026 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 14:02:35] 2025-10-13 12:02:34,921 | INFO     | PID=3449463 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 14:02:35] 2025-10-13 12:02:34,922 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 14:02:35] 2025-10-13 12:02:34,922 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 14:02:35] 2025-10-13 12:02:34,922 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 14:02:35] 2025-10-13 12:02:34,922 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 14:02:35] 2025-10-13 12:02:34,922 | INFO     | [monitor] control thread has ended
[2025-10-13 14:02:35] 2025-10-13 12:02:34,969 [wrapper] ==== pilot stdout END ====
[2025-10-13 14:02:35] 2025-10-13 12:02:34,971 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 14:02:35] 2025-10-13 12:02:34,974 [wrapper] pilotpid: 3449463
[2025-10-13 14:02:35] 2025-10-13 12:02:34,976 [wrapper] Pilot exit status: 0
[2025-10-13 14:02:35] 2025-10-13 12:02:34,984 [wrapper] pandaids: 6840714554
[2025-10-13 14:02:35] 2025-10-13 12:02:35,001 [wrapper] cleanup supervisor_pilot 3468331 3449464
[2025-10-13 14:02:35] 2025-10-13 12:02:35,004 [wrapper] Test setup, not cleaning
[2025-10-13 14:02:35] 2025-10-13 12:02:35,006 [wrapper] apfmon messages muted
[2025-10-13 14:02:35] 2025-10-13 12:02:35,008 [wrapper] ==== wrapper stdout END ====
[2025-10-13 14:02:35] 2025-10-13 12:02:35,011 [wrapper] ==== wrapper stderr END ====
[2025-10-13 14:02:35]  *** Error codes and diagnostics ***
[2025-10-13 14:02:35]     "exeErrorCode": 0,
[2025-10-13 14:02:35]     "exeErrorDiag": "",
[2025-10-13 14:02:35]     "pilotErrorCode": 0,
[2025-10-13 14:02:35]     "pilotErrorDiag": "",
[2025-10-13 14:02:35]  *** Listing of results directory ***
[2025-10-13 14:02:35] total 411580
[2025-10-13 14:02:35] -rw-r--r-- 1 boinc boinc    557409 Oct 12 21:28 pilot3.tar.gz
[2025-10-13 14:02:35] -rw-r--r-- 1 boinc boinc      5112 Oct 12 21:47 queuedata.json
[2025-10-13 14:02:35] -rwx------ 1 boinc boinc     36292 Oct 12 21:48 runpilot2-wrapper.sh
[2025-10-13 14:02:35] -rw-r--r-- 1 boinc boinc       100 Oct 13 12:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 14:02:35] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 12:40 run_atlas
[2025-10-13 14:02:35] -rw-r--r-- 1 boinc boinc       105 Oct 13 12:40 job.xml
[2025-10-13 14:02:35] -rw-r--r-- 2 boinc boinc 221861643 Oct 13 12:40 EVNT.46676267._004472.pool.root.1
[2025-10-13 14:02:35] -rw-r--r-- 2 boinc boinc    569682 Oct 13 12:40 input.tar.gz
[2025-10-13 14:02:35] -rw-r--r-- 2 boinc boinc     15120 Oct 13 12:40 start_atlas.sh
[2025-10-13 14:02:35] drwxrwx--x 2 boinc boinc      4096 Oct 13 12:40 shared
[2025-10-13 14:02:35] -rw-r--r-- 1 boinc boinc         0 Oct 13 12:40 boinc_setup_complete
[2025-10-13 14:02:35] -rw-r--r-- 1 boinc boinc      6447 Oct 13 12:40 init_data.xml
[2025-10-13 14:02:35] -rw-r--r-- 1 boinc boinc         0 Oct 13 12:40 boinc_lockfile
[2025-10-13 14:02:35] -rw-r--r-- 1 boinc boinc      2550 Oct 13 12:40 pandaJob.out
[2025-10-13 14:02:35] -rw------- 1 boinc boinc    972497 Oct 13 12:41 agis_schedconf.cvmfs.json
[2025-10-13 14:02:35] -rw------- 1 boinc boinc   1560580 Oct 13 12:41 agis_ddmendpoints.agis.ALL.json
[2025-10-13 14:02:35] drwx------ 5 boinc boinc      4096 Oct 13 12:41 pilot3
[2025-10-13 14:02:35] -rw------- 1 boinc boinc 193755105 Oct 13 14:01 HITS.46676269._087950.pool.root.1
[2025-10-13 14:02:35] -rw-r--r-- 1 boinc boinc       529 Oct 13 14:01 boinc_task_state.xml
[2025-10-13 14:02:35] -rw------- 1 boinc boinc      1014 Oct 13 14:01 memory_monitor_summary.json
[2025-10-13 14:02:35] -rw------- 1 boinc boinc    262218 Oct 13 14:01 log.46676269._087950.job.log.tgz.1
[2025-10-13 14:02:35] -rw------- 1 boinc boinc      7752 Oct 13 14:02 heartbeat.json
[2025-10-13 14:02:35] -rw-r--r-- 1 boinc boinc      8192 Oct 13 14:02 boinc_mmap_file
[2025-10-13 14:02:35] -rw-r--r-- 1 boinc boinc        27 Oct 13 14:02 wrapper_checkpoint.txt
[2025-10-13 14:02:35] -rw------- 1 boinc boinc        95 Oct 13 14:02 pilot_heartbeat.json
[2025-10-13 14:02:35] -rw------- 1 boinc boinc       747 Oct 13 14:02 pilotlog.txt
[2025-10-13 14:02:35] -rw------- 1 boinc boinc    714373 Oct 13 14:02 log.46676269._087950.job.log.1
[2025-10-13 14:02:35] -rw------- 1 boinc boinc       357 Oct 13 14:02 output.list
[2025-10-13 14:02:35] -rw-r--r-- 1 boinc boinc       620 Oct 13 14:02 runtime_log
[2025-10-13 14:02:35] -rw------- 1 boinc boinc    993280 Oct 13 14:02 result.tar.gz
[2025-10-13 14:02:35] -rw-r--r-- 1 boinc boinc      8782 Oct 13 14:02 runtime_log.err
[2025-10-13 14:02:35] -rw------- 1 boinc boinc       659 Oct 13 14:02 XAYKDmtEHS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOLlNDmS9ltGn.diag
[2025-10-13 14:02:35] -rw-r--r-- 1 boinc boinc      8665 Oct 13 14:02 stderr.txt
[2025-10-13 14:02:35] HITS file was successfully produced:
[2025-10-13 14:02:35] -rw------- 1 boinc boinc 193755105 Oct 13 14:01 shared/HITS.pool.root.1
[2025-10-13 14:02:35]  *** Contents of shared directory: ***
[2025-10-13 14:02:35] total 407436
[2025-10-13 14:02:35] -rw-r--r-- 2 boinc boinc 221861643 Oct 13 12:40 ATLAS.root_0
[2025-10-13 14:02:35] -rw-r--r-- 2 boinc boinc    569682 Oct 13 12:40 input.tar.gz
[2025-10-13 14:02:35] -rw-r--r-- 2 boinc boinc     15120 Oct 13 12:40 start_atlas.sh
[2025-10-13 14:02:35] -rw------- 1 boinc boinc 193755105 Oct 13 14:01 HITS.pool.root.1
[2025-10-13 14:02:35] -rw------- 1 boinc boinc    993280 Oct 13 14:02 result.tar.gz
14:02:36 (3445753): run_atlas exited; CPU time 13908.938732
14:02:36 (3445753): called boinc_finish(0)

</stderr_txt>
]]>

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