Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:25:46 (601899): wrapper (7.7.26015): starting
15:25:46 (601899): wrapper: running run_atlas (--nthreads 4)
[2025-10-14 15:25:46] Arguments: --nthreads 4
[2025-10-14 15:25:46] Threads: 4
[2025-10-14 15:25:46] Checking for CVMFS
[2025-10-14 15:25:46] No cvmfs_config command found, will try listing directly
[2025-10-14 15:25:46] CVMFS is ok
[2025-10-14 15:25:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 15:25:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 15:25:46] Further information can be found at the LHC@home message board.
[2025-10-14 15:25:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 15:25:46] Checking for apptainer binary...
[2025-10-14 15:25:46] which: no apptainer in ((null))
[2025-10-14 15:25:46] apptainer is not installed, using version from CVMFS
[2025-10-14 15:25:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 15:25:47] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-10-14 15:25:47] apptainer works
[2025-10-14 15:25:47] Set ATHENA_PROC_NUMBER=4
[2025-10-14 15:25:47] Set ATHENA_CORE_NUMBER=4
[2025-10-14 15:25:47] Starting ATLAS job with PandaID=6840750923
[2025-10-14 15:25:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 18:14:10]  *** The last 200 lines of the pilot log: ***
[2025-10-14 18:14:10] 2025-10-14 16:00:18,882 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 18:14:10] 2025-10-14 16:00:19,705 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-14 18:14:10] 2025-10-14 16:00:19,725 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2716.6186484374985
[2025-10-14 18:14:10] 2025-10-14 16:00:19,750 | INFO     | using path: /scratch/boinc/var/slot120/slots/0/PanDA_Pilot-6840750923/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 18:14:10] 2025-10-14 16:00:19,750 | INFO     | extracted standard info from prmon json
[2025-10-14 18:14:10] 2025-10-14 16:00:19,750 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 18:14:10] 2025-10-14 16:00:19,751 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 18:14:10] 2025-10-14 16:00:19,751 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 18:14:10] 2025-10-14 16:00:19,751 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 18:14:10] 2025-10-14 16:00:19,754 | INFO     | fitting pss+swap vs Time
[2025-10-14 18:14:10] 2025-10-14 16:00:19,754 | INFO     | sum of square deviations: 1067554900.0
[2025-10-14 18:14:10] 2025-10-14 16:00:19,755 | INFO     | sum of deviations: 4288714373.0000014
[2025-10-14 18:14:10] 2025-10-14 16:00:19,755 | INFO     | mean x: 1760452970.0
[2025-10-14 18:14:10] 2025-10-14 16:00:19,755 | INFO     | mean y: 2337200.317880795
[2025-10-14 18:14:10] 2025-10-14 16:00:19,755 | INFO     | -- intersect: -7069973512.161205
[2025-10-14 18:14:10] 2025-10-14 16:00:19,755 | INFO     | intersect: -7069973512.161205
[2025-10-14 18:14:10] 2025-10-14 16:00:19,756 | INFO     | chi2: 1.3152684041230023
[2025-10-14 18:14:10] 2025-10-14 16:00:19,756 | INFO     | sum of square deviations: 964976232.5
[2025-10-14 18:14:10] 2025-10-14 16:00:19,757 | INFO     | sum of deviations: 4149497427.999998
[2025-10-14 18:14:10] 2025-10-14 16:00:19,757 | INFO     | mean x: 1760452817.5
[2025-10-14 18:14:10] 2025-10-14 16:00:19,757 | INFO     | mean y: 2336993.2739726026
[2025-10-14 18:14:10] 2025-10-14 16:00:19,757 | INFO     | -- intersect: -7567791878.611586
[2025-10-14 18:14:10] 2025-10-14 16:00:19,757 | INFO     | intersect: -7567791878.611586
[2025-10-14 18:14:10] 2025-10-14 16:00:19,757 | INFO     | chi2: 1.3160383908424458
[2025-10-14 18:14:10] 2025-10-14 16:00:19,758 | INFO     | current chi2=1.3160383908424458 (change=-0.058542174131896565 %)
[2025-10-14 18:14:10] 2025-10-14 16:00:19,758 | INFO     | right removable region: 145
[2025-10-14 18:14:10] 2025-10-14 16:00:19,758 | INFO     | sum of square deviations: 964976232.5
[2025-10-14 18:14:10] 2025-10-14 16:00:19,759 | INFO     | sum of deviations: -12841175941.0
[2025-10-14 18:14:10] 2025-10-14 16:00:19,759 | INFO     | mean x: 1760453122.5
[2025-10-14 18:14:10] 2025-10-14 16:00:19,759 | INFO     | mean y: 2362156.794520548
[2025-10-14 18:14:10] 2025-10-14 16:00:19,759 | INFO     | -- intersect: 23429144620.99923
[2025-10-14 18:14:10] 2025-10-14 16:00:19,759 | INFO     | intersect: 23429144620.99923
[2025-10-14 18:14:10] 2025-10-14 16:00:19,759 | INFO     | chi2: 0.04028253004781562
[2025-10-14 18:14:10] 2025-10-14 16:00:19,759 | INFO     | current chi2=0.04028253004781562 (change=96.93731485364196 %)
[2025-10-14 18:14:10] 2025-10-14 16:00:19,760 | INFO     | sum of square deviations: 869188390.0
[2025-10-14 18:14:10] 2025-10-14 16:00:19,760 | INFO     | sum of deviations: -10706620447.999996
[2025-10-14 18:14:10] 2025-10-14 16:00:19,761 | INFO     | mean x: 1760453275.0
[2025-10-14 18:14:10] 2025-10-14 16:00:19,761 | INFO     | mean y: 2358726.6808510637
[2025-10-14 18:14:10] 2025-10-14 16:00:19,761 | INFO     | -- intersect: 21687536817.77749
[2025-10-14 18:14:10] 2025-10-14 16:00:19,761 | INFO     | intersect: 21687536817.77749
[2025-10-14 18:14:10] 2025-10-14 16:00:19,761 | INFO     | chi2: 0.036186285186163625
[2025-10-14 18:14:10] 2025-10-14 16:00:19,761 | INFO     | current chi2=0.036186285186163625 (change=10.168787453989928 %)
[2025-10-14 18:14:10] 2025-10-14 16:00:19,761 | INFO     | left removable region: 20
[2025-10-14 18:14:10] 2025-10-14 16:00:19,761 | INFO     | sum of square deviations: 605592750.0
[2025-10-14 18:14:10] 2025-10-14 16:00:19,762 | INFO     | sum of deviations: -4438855564.0
[2025-10-14 18:14:10] 2025-10-14 16:00:19,762 | INFO     | mean x: 1760453397.0
[2025-10-14 18:14:10] 2025-10-14 16:00:19,762 | INFO     | mean y: 2348075.816
[2025-10-14 18:14:10] 2025-10-14 16:00:19,762 | INFO     | -- intersect: 12906066550.708824
[2025-10-14 18:14:10] 2025-10-14 16:00:19,762 | INFO     | intersect: 12906066550.708824
[2025-10-14 18:14:10] 2025-10-14 16:00:19,763 | INFO     | chi2: 0.012731187663798606
[2025-10-14 18:14:10] 2025-10-14 16:00:19,763 | INFO     | -- intersect: 12906066550.708824
[2025-10-14 18:14:10] 2025-10-14 16:00:19,763 | INFO     | current memory leak: -7.33 B/s (using 125 data points, chi2=0.01)
[2025-10-14 18:14:10] 2025-10-14 16:00:19,763 | INFO     | could have reported an average CPU frequency of 2708 MHz (9 samples)
[2025-10-14 18:14:10] 2025-10-14 16:00:19,763 | INFO     | ..............................
[2025-10-14 18:14:10] 2025-10-14 16:00:19,763 | INFO     | . Timing measurements:
[2025-10-14 18:14:10] 2025-10-14 16:00:19,763 | INFO     | . get job = 0 s
[2025-10-14 18:14:10] 2025-10-14 16:00:19,764 | INFO     | . initial setup = 1 s
[2025-10-14 18:14:10] 2025-10-14 16:00:19,764 | INFO     | . payload setup = 8 s
[2025-10-14 18:14:10] 2025-10-14 16:00:19,764 | INFO     | . stage-in = 0 s
[2025-10-14 18:14:10] 2025-10-14 16:00:19,764 | INFO     | . payload execution = 9217 s
[2025-10-14 18:14:10] 2025-10-14 16:00:19,764 | INFO     | . stage-out = 0 s
[2025-10-14 18:14:10] 2025-10-14 16:00:19,764 | INFO     | . log creation = 0 s
[2025-10-14 18:14:10] 2025-10-14 16:00:19,764 | INFO     | ..............................
[2025-10-14 18:14:10] 2025-10-14 16:00:19,862 | INFO     | 
[2025-10-14 18:14:10] 2025-10-14 16:00:19,863 | INFO     | job summary report
[2025-10-14 18:14:10] 2025-10-14 16:00:19,863 | INFO     | --------------------------------------------------
[2025-10-14 18:14:10] 2025-10-14 16:00:19,863 | INFO     | PanDA job id: 6840750923
[2025-10-14 18:14:10] 2025-10-14 16:00:19,863 | INFO     | task id: 46676269
[2025-10-14 18:14:10] 2025-10-14 16:00:19,863 | INFO     | errors: (none)
[2025-10-14 18:14:10] 2025-10-14 16:00:19,863 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 18:14:10] 2025-10-14 16:00:19,863 | INFO     | pilot state: finished 
[2025-10-14 18:14:10] 2025-10-14 16:00:19,863 | INFO     | transexitcode: 0
[2025-10-14 18:14:10] 2025-10-14 16:00:19,863 | INFO     | exeerrorcode: 0
[2025-10-14 18:14:10] 2025-10-14 16:00:19,863 | INFO     | exeerrordiag: 
[2025-10-14 18:14:10] 2025-10-14 16:00:19,864 | INFO     | exitcode: 0
[2025-10-14 18:14:10] 2025-10-14 16:00:19,864 | INFO     | exitmsg: OK
[2025-10-14 18:14:10] 2025-10-14 16:00:19,864 | INFO     | cpuconsumptiontime: 34867 s
[2025-10-14 18:14:10] 2025-10-14 16:00:19,864 | INFO     | nevents: 400
[2025-10-14 18:14:10] 2025-10-14 16:00:19,864 | INFO     | neventsw: 0
[2025-10-14 18:14:10] 2025-10-14 16:00:19,864 | INFO     | pid: 613256
[2025-10-14 18:14:10] 2025-10-14 16:00:19,864 | INFO     | pgrp: 613256
[2025-10-14 18:14:10] 2025-10-14 16:00:19,864 | INFO     | corecount: 4
[2025-10-14 18:14:10] 2025-10-14 16:00:19,864 | INFO     | event service: False
[2025-10-14 18:14:10] 2025-10-14 16:00:19,864 | INFO     | sizes: {0: 2348869, 1: 2348897, 7: 2349159, 11: 2349187, 9229: 2377850, 9231: 2387056, 9240: 2387258}
[2025-10-14 18:14:10] 2025-10-14 16:00:19,864 | INFO     | --------------------------------------------------
[2025-10-14 18:14:10] 2025-10-14 16:00:19,864 | INFO     | 
[2025-10-14 18:14:10] 2025-10-14 16:00:19,865 | INFO     | executing command: ls -lF /scratch/boinc/var/slot120/slots/0
[2025-10-14 18:14:10] 2025-10-14 16:00:19,893 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 18:14:10] 2025-10-14 16:00:19,894 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 18:14:10] 2025-10-14 16:00:19,894 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 18:14:10] 2025-10-14 16:00:19,894 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 18:14:10] 2025-10-14 16:00:19,894 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 18:14:10] 2025-10-14 16:00:19,894 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 18:14:10] 2025-10-14 16:00:19,895 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 18:14:10] 2025-10-14 16:00:19,895 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 18:14:10] 2025-10-14 16:00:19,895 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 18:14:10] 2025-10-14 16:00:19,895 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 18:14:10] 2025-10-14 16:00:19,895 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 18:14:10] 2025-10-14 16:00:19,895 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 18:14:10] 2025-10-14 16:00:19,895 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 18:14:10] 2025-10-14 16:00:19,895 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 18:14:10] 2025-10-14 16:00:19,895 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 18:14:10] 2025-10-14 16:00:19,895 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 18:14:10] 2025-10-14 16:00:19,896 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 18:14:10] 2025-10-14 16:00:19,896 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 18:14:10] 2025-10-14 16:00:19,896 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 18:14:10] 2025-10-14 16:00:19,896 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 18:14:10] 2025-10-14 16:00:19,896 | INFO     | job 6840750923 has completed (purged errors)
[2025-10-14 18:14:10] 2025-10-14 16:00:19,896 | INFO     | overall cleanup function is called
[2025-10-14 18:14:10] 2025-10-14 16:00:20,826 | INFO     | PID=605913 has CPU usage=17.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 18:14:10] 2025-10-14 16:00:20,826 | INFO     | .. there are 8 such processes running
[2025-10-14 18:14:10] 2025-10-14 16:00:20,904 | INFO     | --- collectZombieJob: --- 10, [613256]
[2025-10-14 18:14:10] 2025-10-14 16:00:20,905 | INFO     | zombie collector waiting for pid 613256
[2025-10-14 18:14:10] 2025-10-14 16:00:20,905 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 18:14:10] 2025-10-14 16:00:20,905 | INFO     | collected zombie processes
[2025-10-14 18:14:10] 2025-10-14 16:00:20,905 | INFO     | will attempt to kill all subprocesses of pid=613256
[2025-10-14 18:14:10] 2025-10-14 16:00:21,682 | INFO     | process IDs to be killed: [613256] (in reverse order)
[2025-10-14 18:14:10] 2025-10-14 16:00:21,912 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 18:14:10] 2025-10-14 16:00:21,912 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 18:14:10] 2025-10-14 16:00:21,946 | INFO     | did not find any defunct processes belonging to 613256
[2025-10-14 18:14:10] 2025-10-14 16:00:21,976 | INFO     | did not find any defunct processes belonging to 613256
[2025-10-14 18:14:10] 2025-10-14 16:00:21,977 | INFO     | ready for new job
[2025-10-14 18:14:10] 2025-10-14 16:00:21,977 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 18:14:10] 2025-10-14 16:00:21,979 | INFO     | ***************************************
[2025-10-14 18:14:10] 2025-10-14 16:00:21,979 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 18:14:10] 2025-10-14 16:00:21,980 | INFO     | ***************************************
[2025-10-14 18:14:10] 2025-10-14 16:00:21,980 | INFO     | 
[2025-10-14 18:14:10] 2025-10-14 16:00:21,988 | INFO     | architecture information:
[2025-10-14 18:14:10] 2025-10-14 16:00:21,988 | INFO     | executing command: cat /etc/os-release
[2025-10-14 18:14:10] 2025-10-14 16:00:22,013 | INFO     | cat /etc/os-release:
[2025-10-14 18:14:10] NAME="CentOS Linux"
[2025-10-14 18:14:10] VERSION="7 (Core)"
[2025-10-14 18:14:10] ID="centos"
[2025-10-14 18:14:10] ID_LIKE="rhel fedora"
[2025-10-14 18:14:10] VERSION_ID="7"
[2025-10-14 18:14:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 18:14:10] ANSI_COLOR="0;31"
[2025-10-14 18:14:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 18:14:10] HOME_URL="https://www.centos.org/"
[2025-10-14 18:14:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 18:14:10] 
[2025-10-14 18:14:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 18:14:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 18:14:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 18:14:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 18:14:10] 
[2025-10-14 18:14:10] 2025-10-14 16:00:22,013 | INFO     | ***************************************
[2025-10-14 18:14:10] 2025-10-14 16:00:22,516 | INFO     | executing command: df -mP /scratch/boinc/var/slot120/slots/0
[2025-10-14 18:14:10] 2025-10-14 16:00:22,538 | INFO     | sufficient remaining disk space (3359113216000 B)
[2025-10-14 18:14:10] 2025-10-14 16:00:22,539 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 18:14:10] 2025-10-14 16:00:22,539 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 18:14:10] 2025-10-14 16:00:22,539 | INFO     | update_server=False
[2025-10-14 18:14:10] 2025-10-14 16:00:22,539 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 18:14:10] 2025-10-14 16:00:22,539 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 18:14:10] 2025-10-14 16:00:22,539 | INFO     | aborting loop
[2025-10-14 18:14:10] 2025-10-14 16:00:22,546 | INFO     | all job control threads have been joined
[2025-10-14 18:14:10] 2025-10-14 16:00:22,942 | INFO     | all payload control threads have been joined
[2025-10-14 18:14:10] 2025-10-14 16:00:23,059 | INFO     | all data control threads have been joined
[2025-10-14 18:14:10] 2025-10-14 16:00:23,529 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 18:14:10] 2025-10-14 16:00:23,545 | INFO     | [job] retrieve thread has finished
[2025-10-14 18:14:10] 2025-10-14 16:00:23,545 | INFO     | [job] job monitor thread has finished
[2025-10-14 18:14:10] 2025-10-14 16:00:23,552 | INFO     | [job] control thread has finished
[2025-10-14 18:14:10] 2025-10-14 16:00:23,583 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 18:14:10] 2025-10-14 16:00:23,730 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 18:14:10] 2025-10-14 16:00:23,838 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 18:14:10] 2025-10-14 16:00:23,855 | INFO     | [payload] failed_post thread has finished
[2025-10-14 18:14:10] 2025-10-14 16:00:23,948 | INFO     | [payload] control thread has finished
[2025-10-14 18:14:10] 2025-10-14 16:00:24,008 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 18:14:10] 2025-10-14 16:00:24,065 | INFO     | [data] control thread has finished
[2025-10-14 18:14:10] 2025-10-14 16:00:24,113 | INFO     | [data] copytool_in thread has finished
[2025-10-14 18:14:10] 2025-10-14 16:00:24,584 | INFO     | [payload] validate_post thread has finished
[2025-10-14 18:14:10] 2025-10-14 16:00:24,873 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 18:14:10] 2025-10-14 16:00:24,901 | INFO     | [job] validate thread has finished
[2025-10-14 18:14:10] 2025-10-14 16:00:25,531 | INFO     | [data] copytool_out thread has finished
[2025-10-14 18:14:10] 2025-10-14 16:00:25,792 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 18:14:10] 2025-10-14 16:00:25,878 | INFO     | [job] queue monitor thread has finished
[2025-10-14 18:14:10] 2025-10-14 16:00:29,798 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 18:14:10] 2025-10-14 16:00:53,861 | INFO     | PID=605913 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-14 18:14:10] 2025-10-14 16:00:53,862 | INFO     | .. there are 8 such processes running
[2025-10-14 18:14:10] 2025-10-14 16:00:53,863 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 18:14:10] 2025-10-14 16:00:53,863 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 18:14:10] 2025-10-14 16:00:53,863 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 18:14:10] 2025-10-14 16:01:15,990 | INFO     | [monitor] cgroup control has ended
[2025-10-14 18:14:10] 2025-10-14 16:01:16,574 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23030900700992)>', '<ExcThread(monitor, started 23030652679936)>']
[2025-10-14 18:14:10] 2025-10-14 16:01:16,965 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 18:14:10] 2025-10-14 16:01:16,966 | INFO     | [monitor] control thread has ended
[2025-10-14 18:14:10] 2025-10-14 16:01:21,598 | INFO     | all workflow threads have been joined
[2025-10-14 18:14:10] 2025-10-14 16:01:21,598 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 18:14:10] 2025-10-14 16:01:21,600 | INFO     | traces error code: 0
[2025-10-14 18:14:10] 2025-10-14 16:01:21,600 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 18:14:10] 2025-10-14 16:01:21,756 [wrapper] ==== pilot stdout END ====
[2025-10-14 18:14:10] 2025-10-14 16:01:21,760 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 18:14:10] 2025-10-14 16:01:21,764 [wrapper] pilotpid: 605913
[2025-10-14 18:14:10] 2025-10-14 16:01:21,769 [wrapper] Pilot exit status: 0
[2025-10-14 18:14:10] 2025-10-14 16:01:21,784 [wrapper] pandaids: 6840750923
[2025-10-14 18:14:10] 2025-10-14 16:01:21,942 [wrapper] cleanup supervisor_pilot  951516 605914
[2025-10-14 18:14:10] 2025-10-14 16:01:21,947 [wrapper] Test setup, not cleaning
[2025-10-14 18:14:10] 2025-10-14 16:01:21,951 [wrapper] apfmon messages muted
[2025-10-14 18:14:10] 2025-10-14 16:01:21,955 [wrapper] ==== wrapper stdout END ====
[2025-10-14 18:14:10] 2025-10-14 16:01:21,959 [wrapper] ==== wrapper stderr END ====
[2025-10-14 18:14:10]  *** Error codes and diagnostics ***
[2025-10-14 18:14:10]     "exeErrorCode": 0,
[2025-10-14 18:14:10]     "exeErrorDiag": "",
[2025-10-14 18:14:10]     "pilotErrorCode": 0,
[2025-10-14 18:14:10]     "pilotErrorDiag": "",
[2025-10-14 18:14:10]  *** Listing of results directory ***
[2025-10-14 18:14:10] total 415240
[2025-10-14 18:14:10] -rw-r--r-- 1 boinc boinc    557409 Oct 12 23:31 pilot3.tar.gz
[2025-10-14 18:14:10] -rwx------ 1 boinc boinc     36292 Oct 12 23:36 runpilot2-wrapper.sh
[2025-10-14 18:14:10] -rw-r--r-- 1 boinc boinc      5112 Oct 12 23:36 queuedata.json
[2025-10-14 18:14:10] -rw-r--r-- 1 boinc boinc       100 Oct 14 15:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 18:14:10] -rwxr-xr-x 1 boinc boinc      7986 Oct 14 15:25 run_atlas
[2025-10-14 18:14:10] -rw-r--r-- 1 boinc boinc       105 Oct 14 15:25 job.xml
[2025-10-14 18:14:10] -rw-r--r-- 1 boinc boinc      6689 Oct 14 15:25 init_data.xml
[2025-10-14 18:14:10] -rw-r--r-- 2 boinc boinc 221912436 Oct 14 15:25 EVNT.46676267._004838.pool.root.1
[2025-10-14 18:14:10] -rw-r--r-- 2 boinc boinc     15120 Oct 14 15:25 start_atlas.sh
[2025-10-14 18:14:10] drwxrwx--x 2 boinc boinc      4096 Oct 14 15:25 shared
[2025-10-14 18:14:10] -rw-r--r-- 2 boinc boinc    569681 Oct 14 15:25 input.tar.gz
[2025-10-14 18:14:10] -rw-r--r-- 1 boinc boinc         0 Oct 14 15:25 boinc_lockfile
[2025-10-14 18:14:10] -rw-r--r-- 1 boinc boinc      2550 Oct 14 15:25 pandaJob.out
[2025-10-14 18:14:10] -rw------- 1 boinc boinc    973969 Oct 14 15:26 agis_schedconf.cvmfs.json
[2025-10-14 18:14:10] -rw------- 1 boinc boinc   1560580 Oct 14 15:26 agis_ddmendpoints.agis.ALL.json
[2025-10-14 18:14:10] drwx------ 5 boinc boinc      4096 Oct 14 15:26 pilot3
[2025-10-14 18:14:10] -rw-r--r-- 1 boinc boinc       528 Oct 14 17:59 boinc_task_state.xml
[2025-10-14 18:14:10] -rw------- 1 boinc boinc 196107227 Oct 14 17:59 HITS.46676269._090142.pool.root.1
[2025-10-14 18:14:10] -rw------- 1 boinc boinc      1023 Oct 14 18:00 memory_monitor_summary.json
[2025-10-14 18:14:10] -rw------- 1 boinc boinc    340813 Oct 14 18:00 log.46676269._090142.job.log.tgz.1
[2025-10-14 18:14:10] -rw------- 1 boinc boinc      7782 Oct 14 18:00 heartbeat.json
[2025-10-14 18:14:10] -rw------- 1 boinc boinc        95 Oct 14 18:00 pilot_heartbeat.json
[2025-10-14 18:14:10] -rw------- 1 boinc boinc      4834 Oct 14 18:01 pilotlog.txt
[2025-10-14 18:14:10] -rw------- 1 boinc boinc   1303354 Oct 14 18:01 log.46676269._090142.job.log.1
[2025-10-14 18:14:10] -rw------- 1 boinc boinc       357 Oct 14 18:01 output.list
[2025-10-14 18:14:10] -rw-r--r-- 1 boinc boinc       620 Oct 14 18:01 runtime_log
[2025-10-14 18:14:10] -rw------- 1 boinc boinc   1658880 Oct 14 18:01 result.tar.gz
[2025-10-14 18:14:10] -rw------- 1 boinc boinc       662 Oct 14 18:01 vwPODmVvIS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyhlNDm7zaRCn.diag
[2025-10-14 18:14:10] -rw-r--r-- 1 boinc boinc      9084 Oct 14 18:01 runtime_log.err
[2025-10-14 18:14:10] -rw-r--r-- 1 boinc boinc        26 Oct 14 18:14 wrapper_checkpoint.txt
[2025-10-14 18:14:10] -rw-r--r-- 1 boinc boinc      8192 Oct 14 18:14 boinc_mmap_file
[2025-10-14 18:14:10] -rw-r--r-- 1 boinc boinc     20979 Oct 14 18:14 stderr.txt
[2025-10-14 18:14:10] HITS file was successfully produced:
[2025-10-14 18:14:10] -rw------- 1 boinc boinc 196107227 Oct 14 17:59 shared/HITS.pool.root.1
[2025-10-14 18:14:10]  *** Contents of shared directory: ***
[2025-10-14 18:14:10] total 410428
[2025-10-14 18:14:10] -rw-r--r-- 2 boinc boinc 221912436 Oct 14 15:25 ATLAS.root_0
[2025-10-14 18:14:10] -rw-r--r-- 2 boinc boinc     15120 Oct 14 15:25 start_atlas.sh
[2025-10-14 18:14:10] -rw-r--r-- 2 boinc boinc    569681 Oct 14 15:25 input.tar.gz
[2025-10-14 18:14:10] -rw------- 1 boinc boinc 196107227 Oct 14 17:59 HITS.pool.root.1
[2025-10-14 18:14:10] -rw------- 1 boinc boinc   1658880 Oct 14 18:01 result.tar.gz
18:14:11 (601899): run_atlas exited; CPU time 35433.084857
18:14:11 (601899): called boinc_finish(0)

</stderr_txt>
]]>

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