Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:12:45 (1064776): wrapper (7.7.26015): starting
22:12:45 (1064776): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 22:12:45] Arguments: --nthreads 8
[2025-10-12 22:12:45] Threads: 8
[2025-10-12 22:12:45] Checking for CVMFS
[2025-10-12 22:12:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 22:12:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 22:12:47] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 22:12:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 22:12:48] 2.13.2.0 2356181 130087 264208 151644 1 235 31444747 32935936 20673 16776704 0 124044488 99.728 93264068 30374 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 22:12:48] CVMFS is ok
[2025-10-12 22:12:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 22:12:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 22:12:48] Further information can be found at the LHC@home message board.
[2025-10-12 22:12:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 22:12:48] Checking for apptainer binary...
[2025-10-12 22:12:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 22:12:48] Running /usr/bin/apptainer --version
[2025-10-12 22:12:49] apptainer version 1.4.3-1.el9
[2025-10-12 22:12:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 22:12:50] c-6-2.aglt2.org
[2025-10-12 22:12:50] apptainer works
[2025-10-12 22:12:51] Set ATHENA_PROC_NUMBER=8
[2025-10-12 22:12:51] Set ATHENA_CORE_NUMBER=8
[2025-10-12 22:12:51] Starting ATLAS job with PandaID=6840750069
[2025-10-12 22:12:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 10:25:02]  *** The last 200 lines of the pilot log: ***
[2025-10-13 10:25:02] 2025-10-13 14:24:20,976 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 10:25:02] 2025-10-13 14:24:21,074 | INFO     | fitting pss+swap vs Time
[2025-10-13 10:25:02] 2025-10-13 14:24:21,075 | INFO     | sum of square deviations: 113341853575.79866
[2025-10-13 10:25:02] 2025-10-13 14:24:21,135 | INFO     | sum of deviations: -434413039201.13727
[2025-10-13 10:25:02] 2025-10-13 14:24:21,141 | INFO     | mean x: 1760343652.0167832
[2025-10-13 10:25:02] 2025-10-13 14:24:21,141 | INFO     | mean y: 2083553.8447552447
[2025-10-13 10:25:02] 2025-10-13 14:24:21,141 | INFO     | -- intersect: 6749072523.8074465
[2025-10-13 10:25:02] 2025-10-13 14:24:21,141 | INFO     | intersect: 6749072523.8074465
[2025-10-13 10:25:02] 2025-10-13 14:24:21,142 | INFO     | chi2: 6.625236895323205
[2025-10-13 10:25:02] 2025-10-13 14:24:21,143 | INFO     | sum of square deviations: 110980831033.09286
[2025-10-13 10:25:02] 2025-10-13 14:24:21,220 | INFO     | sum of deviations: -308872216489.4001
[2025-10-13 10:25:02] 2025-10-13 14:24:21,220 | INFO     | mean x: 1760343499.5239437
[2025-10-13 10:25:02] 2025-10-13 14:24:21,220 | INFO     | mean y: 2091645.2
[2025-10-13 10:25:02] 2025-10-13 14:24:21,220 | INFO     | -- intersect: 4901326886.270937
[2025-10-13 10:25:02] 2025-10-13 14:24:21,220 | INFO     | intersect: 4901326886.270937
[2025-10-13 10:25:02] 2025-10-13 14:24:21,244 | INFO     | chi2: 4.518659782814782
[2025-10-13 10:25:02] 2025-10-13 14:24:21,245 | INFO     | current chi2=4.518659782814782 (change=31.796253413903862 %)
[2025-10-13 10:25:02] 2025-10-13 14:24:21,246 | INFO     | sum of square deviations: 108652745381.43268
[2025-10-13 10:25:02] 2025-10-13 14:24:21,343 | INFO     | sum of deviations: -271707572690.4467
[2025-10-13 10:25:02] 2025-10-13 14:24:21,343 | INFO     | mean x: 1760343347.0283687
[2025-10-13 10:25:02] 2025-10-13 14:24:21,343 | INFO     | mean y: 2094079.2723404255
[2025-10-13 10:25:02] 2025-10-13 14:24:21,343 | INFO     | -- intersect: 4404179054.150386
[2025-10-13 10:25:02] 2025-10-13 14:24:21,344 | INFO     | intersect: 4404179054.150386
[2025-10-13 10:25:02] 2025-10-13 14:24:21,345 | INFO     | chi2: 4.413539624497674
[2025-10-13 10:25:02] 2025-10-13 14:24:21,345 | INFO     | current chi2=4.413539624497674 (change=2.326357003395071 %)
[2025-10-13 10:25:02] 2025-10-13 14:24:21,345 | INFO     | right removable region: 704
[2025-10-13 10:25:02] 2025-10-13 14:24:21,355 | INFO     | sum of square deviations: 110980387563.09291
[2025-10-13 10:25:02] 2025-10-13 14:24:21,372 | INFO     | sum of deviations: -584770393016.6066
[2025-10-13 10:25:02] 2025-10-13 14:24:21,372 | INFO     | mean x: 1760343804.5239437
[2025-10-13 10:25:02] 2025-10-13 14:24:21,372 | INFO     | mean y: 2093252.3591549296
[2025-10-13 10:25:02] 2025-10-13 14:24:21,373 | INFO     | -- intersect: 9277578417.074387
[2025-10-13 10:25:02] 2025-10-13 14:24:21,373 | INFO     | intersect: 9277578417.074387
[2025-10-13 10:25:02] 2025-10-13 14:24:21,374 | INFO     | chi2: 4.088823527392085
[2025-10-13 10:25:02] 2025-10-13 14:24:21,374 | INFO     | current chi2=4.088823527392085 (change=38.28411584379103 %)
[2025-10-13 10:25:02] 2025-10-13 14:24:21,375 | INFO     | sum of square deviations: 108652075358.48788
[2025-10-13 10:25:02] 2025-10-13 14:24:21,390 | INFO     | sum of deviations: -635225576585.9451
[2025-10-13 10:25:02] 2025-10-13 14:24:21,390 | INFO     | mean x: 1760343957.0269504
[2025-10-13 10:25:02] 2025-10-13 14:24:21,390 | INFO     | mean y: 2096553.5234042553
[2025-10-13 10:25:02] 2025-10-13 14:24:21,390 | INFO     | -- intersect: 10293805215.346714
[2025-10-13 10:25:02] 2025-10-13 14:24:21,390 | INFO     | intersect: 10293805215.346714
[2025-10-13 10:25:02] 2025-10-13 14:24:21,392 | INFO     | chi2: 3.725181600945104
[2025-10-13 10:25:02] 2025-10-13 14:24:21,392 | INFO     | current chi2=3.725181600945104 (change=8.893558844270242 %)
[2025-10-13 10:25:02] 2025-10-13 14:24:21,392 | INFO     | left removable region: 20
[2025-10-13 10:25:02] 2025-10-13 14:24:21,393 | INFO     | sum of square deviations: 99229178305.7706
[2025-10-13 10:25:02] 2025-10-13 14:24:21,408 | INFO     | sum of deviations: -464580926289.4649
[2025-10-13 10:25:02] 2025-10-13 14:24:21,408 | INFO     | mean x: 1760343926.5423977
[2025-10-13 10:25:02] 2025-10-13 14:24:21,408 | INFO     | mean y: 2107297.4298245613
[2025-10-13 10:25:02] 2025-10-13 14:24:21,409 | INFO     | -- intersect: 8243858624.453976
[2025-10-13 10:25:02] 2025-10-13 14:24:21,409 | INFO     | intersect: 8243858624.453976
[2025-10-13 10:25:02] 2025-10-13 14:24:21,410 | INFO     | chi2: 1.42751489111581
[2025-10-13 10:25:02] 2025-10-13 14:24:21,410 | INFO     | -- intersect: 8243858624.453976
[2025-10-13 10:25:02] 2025-10-13 14:24:21,410 | INFO     | current memory leak: -4.68 B/s (using 684 data points, chi2=1.43)
[2025-10-13 10:25:02] 2025-10-13 14:24:21,411 | INFO     | could have reported an average CPU frequency of 2600 MHz (27 samples)
[2025-10-13 10:25:02] 2025-10-13 14:24:21,411 | INFO     | ..............................
[2025-10-13 10:25:02] 2025-10-13 14:24:21,411 | INFO     | . Timing measurements:
[2025-10-13 10:25:02] 2025-10-13 14:24:21,412 | INFO     | . get job = 0 s
[2025-10-13 10:25:02] 2025-10-13 14:24:21,412 | INFO     | . initial setup = 7 s
[2025-10-13 10:25:02] 2025-10-13 14:24:21,412 | INFO     | . payload setup = 56 s
[2025-10-13 10:25:02] 2025-10-13 14:24:21,412 | INFO     | . stage-in = 0 s
[2025-10-13 10:25:02] 2025-10-13 14:24:21,412 | INFO     | . payload execution = 43601 s
[2025-10-13 10:25:02] 2025-10-13 14:24:21,412 | INFO     | . stage-out = 4 s
[2025-10-13 10:25:02] 2025-10-13 14:24:21,412 | INFO     | . log creation = 0 s
[2025-10-13 10:25:02] 2025-10-13 14:24:21,412 | INFO     | ..............................
[2025-10-13 10:25:02] 2025-10-13 14:24:22,263 | INFO     | 
[2025-10-13 10:25:02] 2025-10-13 14:24:22,264 | INFO     | job summary report
[2025-10-13 10:25:02] 2025-10-13 14:24:22,264 | INFO     | --------------------------------------------------
[2025-10-13 10:25:02] 2025-10-13 14:24:22,264 | INFO     | PanDA job id: 6840750069
[2025-10-13 10:25:02] 2025-10-13 14:24:22,264 | INFO     | task id: 46676269
[2025-10-13 10:25:02] 2025-10-13 14:24:22,264 | INFO     | errors: (none)
[2025-10-13 10:25:02] 2025-10-13 14:24:22,264 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 10:25:02] 2025-10-13 14:24:22,264 | INFO     | pilot state: finished 
[2025-10-13 10:25:02] 2025-10-13 14:24:22,265 | INFO     | transexitcode: 0
[2025-10-13 10:25:02] 2025-10-13 14:24:22,265 | INFO     | exeerrorcode: 0
[2025-10-13 10:25:02] 2025-10-13 14:24:22,265 | INFO     | exeerrordiag: 
[2025-10-13 10:25:02] 2025-10-13 14:24:22,265 | INFO     | exitcode: 0
[2025-10-13 10:25:02] 2025-10-13 14:24:22,265 | INFO     | exitmsg: OK
[2025-10-13 10:25:02] 2025-10-13 14:24:22,265 | INFO     | cpuconsumptiontime: 49942 s
[2025-10-13 10:25:02] 2025-10-13 14:24:22,265 | INFO     | nevents: 400
[2025-10-13 10:25:02] 2025-10-13 14:24:22,265 | INFO     | neventsw: 0
[2025-10-13 10:25:02] 2025-10-13 14:24:22,266 | INFO     | pid: 1081425
[2025-10-13 10:25:02] 2025-10-13 14:24:22,266 | INFO     | pgrp: 1081425
[2025-10-13 10:25:02] 2025-10-13 14:24:22,266 | INFO     | corecount: 8
[2025-10-13 10:25:02] 2025-10-13 14:24:22,266 | INFO     | event service: False
[2025-10-13 10:25:02] 2025-10-13 14:24:22,266 | INFO     | sizes: {0: 2348628, 1: 2348684, 3: 2348740, 5: 2348967, 6: 2348967, 18: 2348995, 30: 2349151, 41: 2349179, 52: 2349207, 55: 2349497, 63: 2349525, 43664: 2392793, 4
[2025-10-13 10:25:02] 2025-10-13 14:24:22,266 | INFO     | --------------------------------------------------
[2025-10-13 10:25:02] 2025-10-13 14:24:22,266 | INFO     | 
[2025-10-13 10:25:02] 2025-10-13 14:24:22,267 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 10:25:02] 2025-10-13 14:24:22,312 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 10:25:02] 2025-10-13 14:24:22,312 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 10:25:02] 2025-10-13 14:24:22,312 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 10:25:02] 2025-10-13 14:24:22,312 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 10:25:02] 2025-10-13 14:24:22,313 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 10:25:02] 2025-10-13 14:24:22,313 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 10:25:02] 2025-10-13 14:24:22,318 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 10:25:02] 2025-10-13 14:24:22,318 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 10:25:02] 2025-10-13 14:24:22,318 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 10:25:02] 2025-10-13 14:24:22,318 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 10:25:02] 2025-10-13 14:24:22,318 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 10:25:02] 2025-10-13 14:24:22,318 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 10:25:02] 2025-10-13 14:24:22,318 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 10:25:02] 2025-10-13 14:24:22,318 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 10:25:02] 2025-10-13 14:24:22,319 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 10:25:02] 2025-10-13 14:24:22,319 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 10:25:02] 2025-10-13 14:24:22,319 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 10:25:02] 2025-10-13 14:24:22,319 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 10:25:02] 2025-10-13 14:24:22,319 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 10:25:02] 2025-10-13 14:24:22,319 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 10:25:02] 2025-10-13 14:24:22,319 | INFO     | job 6840750069 has completed (purged errors)
[2025-10-13 10:25:02] 2025-10-13 14:24:22,320 | INFO     | overall cleanup function is called
[2025-10-13 10:25:02] 2025-10-13 14:24:23,379 | INFO     | --- collectZombieJob: --- 10, [1081425]
[2025-10-13 10:25:02] 2025-10-13 14:24:23,380 | INFO     | zombie collector waiting for pid 1081425
[2025-10-13 10:25:02] 2025-10-13 14:24:23,380 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 10:25:02] 2025-10-13 14:24:23,380 | INFO     | collected zombie processes
[2025-10-13 10:25:02] 2025-10-13 14:24:23,380 | INFO     | will attempt to kill all subprocesses of pid=1081425
[2025-10-13 10:25:02] 2025-10-13 14:24:24,279 | INFO     | process IDs to be killed: [1081425] (in reverse order)
[2025-10-13 10:25:02] 2025-10-13 14:24:24,611 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 10:25:02] 2025-10-13 14:24:24,612 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 10:25:02] 2025-10-13 14:24:24,625 | INFO     | did not find any defunct processes belonging to 1081425
[2025-10-13 10:25:02] 2025-10-13 14:24:24,642 | INFO     | did not find any defunct processes belonging to 1081425
[2025-10-13 10:25:02] 2025-10-13 14:24:24,642 | INFO     | ready for new job
[2025-10-13 10:25:02] 2025-10-13 14:24:24,642 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 10:25:02] 2025-10-13 14:24:24,646 | INFO     | ***************************************
[2025-10-13 10:25:02] 2025-10-13 14:24:24,646 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 10:25:02] 2025-10-13 14:24:24,646 | INFO     | ***************************************
[2025-10-13 10:25:02] 2025-10-13 14:24:24,647 | INFO     | 
[2025-10-13 10:25:02] 2025-10-13 14:24:24,649 | INFO     | architecture information:
[2025-10-13 10:25:02] 2025-10-13 14:24:24,649 | INFO     | executing command: cat /etc/os-release
[2025-10-13 10:25:02] 2025-10-13 14:24:24,776 | INFO     | cat /etc/os-release:
[2025-10-13 10:25:02] NAME="CentOS Linux"
[2025-10-13 10:25:02] VERSION="7 (Core)"
[2025-10-13 10:25:02] ID="centos"
[2025-10-13 10:25:02] ID_LIKE="rhel fedora"
[2025-10-13 10:25:02] VERSION_ID="7"
[2025-10-13 10:25:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 10:25:02] ANSI_COLOR="0;31"
[2025-10-13 10:25:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 10:25:02] HOME_URL="https://www.centos.org/"
[2025-10-13 10:25:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 10:25:02] 
[2025-10-13 10:25:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 10:25:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 10:25:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 10:25:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 10:25:02] 
[2025-10-13 10:25:02] 2025-10-13 14:24:24,776 | INFO     | ***************************************
[2025-10-13 10:25:02] 2025-10-13 14:24:25,280 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 10:25:02] 2025-10-13 14:24:25,453 | INFO     | sufficient remaining disk space (75062312960 B)
[2025-10-13 10:25:02] 2025-10-13 14:24:25,453 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 10:25:02] 2025-10-13 14:24:25,453 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 10:25:02] 2025-10-13 14:24:25,453 | INFO     | update_server=False
[2025-10-13 10:25:02] 2025-10-13 14:24:25,454 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 10:25:02] 2025-10-13 14:24:25,454 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 10:25:02] 2025-10-13 14:24:25,619 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 10:25:02] 2025-10-13 14:24:25,620 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 10:25:02] 2025-10-13 14:24:25,620 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:25:02] 2025-10-13 14:24:25,620 | INFO     | will abort loop
[2025-10-13 10:25:02] 2025-10-13 14:24:25,935 | INFO     | all data control threads have been joined
[2025-10-13 10:25:02] 2025-10-13 14:24:26,147 | INFO     | all payload control threads have been joined
[2025-10-13 10:25:02] 2025-10-13 14:24:26,185 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 10:25:02] 2025-10-13 14:24:26,477 | INFO     | [job] retrieve thread has finished
[2025-10-13 10:25:02] 2025-10-13 14:24:26,558 | INFO     | [data] copytool_in thread has finished
[2025-10-13 10:25:02] 2025-10-13 14:24:26,625 | INFO     | [job] job monitor thread has finished
[2025-10-13 10:25:02] 2025-10-13 14:24:26,699 | INFO     | [payload] failed_post thread has finished
[2025-10-13 10:25:02] 2025-10-13 14:24:26,941 | INFO     | [data] control thread has finished
[2025-10-13 10:25:02] 2025-10-13 14:24:26,952 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 10:25:02] 2025-10-13 14:24:27,143 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 10:25:02] 2025-10-13 14:24:27,153 | INFO     | [payload] control thread has finished
[2025-10-13 10:25:02] 2025-10-13 14:24:27,171 | INFO     | [job] validate thread has finished
[2025-10-13 10:25:02] 2025-10-13 14:24:27,173 | INFO     | all job control threads have been joined
[2025-10-13 10:25:02] 2025-10-13 14:24:27,233 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 10:25:02] 2025-10-13 14:24:27,267 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:25:02] 2025-10-13 14:24:27,369 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 10:25:02] 2025-10-13 14:24:27,800 | INFO     | [payload] validate_post thread has finished
[2025-10-13 10:25:02] 2025-10-13 14:24:28,178 | INFO     | [job] control thread has finished
[2025-10-13 10:25:02] 2025-10-13 14:24:28,192 | INFO     | [data] copytool_out thread has finished
[2025-10-13 10:25:02] 2025-10-13 14:24:28,273 | INFO     | [job] queue monitor thread has finished
[2025-10-13 10:25:02] 2025-10-13 14:24:29,461 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 10:25:02] 2025-10-13 14:24:55,179 | INFO     | PID=1072373 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 10:25:02] 2025-10-13 14:24:55,179 | INFO     | .. there are 20 such processes running
[2025-10-13 10:25:02] 2025-10-13 14:24:55,180 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 10:25:02] 2025-10-13 14:24:55,180 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 10:25:02] 2025-10-13 14:24:55,180 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 10:25:02] 2025-10-13 14:24:56,419 | INFO     | [monitor] cgroup control has ended
[2025-10-13 10:25:02] 2025-10-13 14:24:56,684 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139961843840832)>', '<ExcThread(monitor, started 139960829077248)>']
[2025-10-13 10:25:02] 2025-10-13 14:24:57,193 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 10:25:02] 2025-10-13 14:24:57,194 | INFO     | [monitor] control thread has ended
[2025-10-13 10:25:02] 2025-10-13 14:25:01,710 | INFO     | all workflow threads have been joined
[2025-10-13 10:25:02] 2025-10-13 14:25:01,711 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 10:25:02] 2025-10-13 14:25:01,711 | INFO     | traces error code: 0
[2025-10-13 10:25:02] 2025-10-13 14:25:01,711 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 10:25:02] 2025-10-13 14:25:01,916 [wrapper] ==== pilot stdout END ====
[2025-10-13 10:25:02] 2025-10-13 14:25:01,920 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 10:25:02] 2025-10-13 14:25:01,923 [wrapper] pilotpid: 1072373
[2025-10-13 10:25:02] 2025-10-13 14:25:01,928 [wrapper] Pilot exit status: 0
[2025-10-13 10:25:02] 2025-10-13 14:25:01,992 [wrapper] pandaids: 6840750069
[2025-10-13 10:25:02] 2025-10-13 14:25:02,251 [wrapper] cleanup supervisor_pilot 3169850 1072374
[2025-10-13 10:25:02] 2025-10-13 14:25:02,281 [wrapper] Test setup, not cleaning
[2025-10-13 10:25:02] 2025-10-13 14:25:02,329 [wrapper] apfmon messages muted
[2025-10-13 10:25:02] 2025-10-13 14:25:02,385 [wrapper] ==== wrapper stdout END ====
[2025-10-13 10:25:02] 2025-10-13 14:25:02,411 [wrapper] ==== wrapper stderr END ====
[2025-10-13 10:25:02]  *** Error codes and diagnostics ***
[2025-10-13 10:25:02]     "exeErrorCode": 0,
[2025-10-13 10:25:02]     "exeErrorDiag": "",
[2025-10-13 10:25:02]     "pilotErrorCode": 0,
[2025-10-13 10:25:02]     "pilotErrorDiag": "",
[2025-10-13 10:25:02]  *** Listing of results directory ***
[2025-10-13 10:25:03] total 419976
[2025-10-13 10:25:03] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 16:55 pilot3.tar.gz
[2025-10-13 10:25:03] -rwx------. 1 boincer umatlas     36292 Oct 12 17:07 runpilot2-wrapper.sh
[2025-10-13 10:25:03] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 17:07 queuedata.json
[2025-10-13 10:25:03] -rw-r--r--. 1 boincer umatlas       100 Oct 12 22:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 10:25:03] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 22:12 run_atlas
[2025-10-13 10:25:03] -rw-r--r--. 1 boincer umatlas       105 Oct 12 22:12 job.xml
[2025-10-13 10:25:03] -rw-r--r--. 2 boincer umatlas 222671993 Oct 12 22:12 EVNT.46676267._004768.pool.root.1
[2025-10-13 10:25:03] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 22:12 start_atlas.sh
[2025-10-13 10:25:03] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 22:12 shared
[2025-10-13 10:25:03] -rw-r--r--. 2 boincer umatlas    569675 Oct 12 22:12 input.tar.gz
[2025-10-13 10:25:03] -rw-r--r--. 1 boincer umatlas         0 Oct 12 22:12 boinc_lockfile
[2025-10-13 10:25:03] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 22:12 pandaJob.out
[2025-10-13 10:25:03] -rw-------. 1 boincer umatlas    975595 Oct 12 22:14 agis_schedconf.cvmfs.json
[2025-10-13 10:25:03] drwx------. 5 boincer umatlas      4096 Oct 12 22:14 pilot3
[2025-10-13 10:25:03] -rw-r--r--. 1 boincer umatlas      6656 Oct 13 10:18 init_data.xml
[2025-10-13 10:25:03] -rw-------. 1 boincer umatlas 192100801 Oct 13 10:21 HITS.46676269._089448.pool.root.1
[2025-10-13 10:25:03] -rw-r--r--. 1 boincer umatlas       531 Oct 13 10:21 boinc_task_state.xml
[2025-10-13 10:25:03] -rw-------. 1 boincer umatlas      1049 Oct 13 10:23 memory_monitor_summary.json
[2025-10-13 10:25:03] -rw-------. 1 boincer umatlas   1560580 Oct 13 10:24 agis_ddmendpoints.agis.ALL.json
[2025-10-13 10:25:03] -rw-------. 1 boincer umatlas    783609 Oct 13 10:24 log.46676269._089448.job.log.tgz.1
[2025-10-13 10:25:03] -rw-------. 1 boincer umatlas      7838 Oct 13 10:24 heartbeat.json
[2025-10-13 10:25:03] -rw-------. 1 boincer umatlas        95 Oct 13 10:24 pilot_heartbeat.json
[2025-10-13 10:25:03] -rw-------. 1 boincer umatlas      5010 Oct 13 10:25 pilotlog.txt
[2025-10-13 10:25:03] -rw-------. 1 boincer umatlas   4905564 Oct 13 10:25 log.46676269._089448.job.log.1
[2025-10-13 10:25:03] -rw-------. 1 boincer umatlas       357 Oct 13 10:25 output.list
[2025-10-13 10:25:03] -rw-r--r--. 1 boincer umatlas        28 Oct 13 10:25 wrapper_checkpoint.txt
[2025-10-13 10:25:03] -rw-r--r--. 1 boincer umatlas       620 Oct 13 10:25 runtime_log
[2025-10-13 10:25:03] -rw-------. 1 boincer umatlas   5703680 Oct 13 10:25 result.tar.gz
[2025-10-13 10:25:03] -rw-r--r--. 1 boincer umatlas      8689 Oct 13 10:25 runtime_log.err
[2025-10-13 10:25:03] -rw-------. 1 boincer umatlas       657 Oct 13 10:25 OTENDmlSIS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQZlNDmEmLj3m.diag
[2025-10-13 10:25:03] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 10:25 boinc_mmap_file
[2025-10-13 10:25:03] -rw-r--r--. 1 boincer umatlas     21039 Oct 13 10:25 stderr.txt
[2025-10-13 10:25:03] HITS file was successfully produced:
[2025-10-13 10:25:03] -rw-------. 1 boincer umatlas 192100801 Oct 13 10:21 shared/HITS.pool.root.1
[2025-10-13 10:25:03]  *** Contents of shared directory: ***
[2025-10-13 10:25:03] total 411212
[2025-10-13 10:25:03] -rw-r--r--. 2 boincer umatlas 222671993 Oct 12 22:12 ATLAS.root_0
[2025-10-13 10:25:03] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 22:12 start_atlas.sh
[2025-10-13 10:25:03] -rw-r--r--. 2 boincer umatlas    569675 Oct 12 22:12 input.tar.gz
[2025-10-13 10:25:03] -rw-------. 1 boincer umatlas 192100801 Oct 13 10:21 HITS.pool.root.1
[2025-10-13 10:25:03] -rw-------. 1 boincer umatlas   5703680 Oct 13 10:25 result.tar.gz
10:25:04 (1064776): run_atlas exited; CPU time 51610.776953
10:25:04 (1064776): called boinc_finish(0)

</stderr_txt>
]]>

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