Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:21:19 (1687549): wrapper (7.7.26015): starting
12:21:19 (1687549): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 12:21:19] Arguments: --nthreads 3
[2025-10-13 12:21:19] Threads: 3
[2025-10-13 12:21:19] Checking for CVMFS
[2025-10-13 12:21:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 12:21:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 12:21:20] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 12:21:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 12:21:20] 2.9.2.0 4017482 5540 73572 151658 2 56 28569411 36864001 0 130560 0 4133015 99.990 191824 783 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 12:21:20] CVMFS is ok
[2025-10-13 12:21:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 12:21:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 12:21:20] Further information can be found at the LHC@home message board.
[2025-10-13 12:21:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 12:21:20] Checking for apptainer binary...
[2025-10-13 12:21:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 12:21:20] Running /usr/bin/apptainer --version
[2025-10-13 12:21:20] apptainer version 1.4.1-1.1
[2025-10-13 12:21:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 12:21:20] cosA133
[2025-10-13 12:21:20] apptainer works
[2025-10-13 12:21:20] Set ATHENA_PROC_NUMBER=3
[2025-10-13 12:21:20] Set ATHENA_CORE_NUMBER=3
[2025-10-13 12:21:20] Starting ATLAS job with PandaID=6840970241
[2025-10-13 12:21:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 13:53:50]  *** The last 200 lines of the pilot log: ***
[2025-10-13 13:53:50]  protocol_id=None
[2025-10-13 13:53:50]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 13:53:50]  replicas=None
[2025-10-13 13:53:50]  scope=mc23_13p6TeV
[2025-10-13 13:53:50]  status=None
[2025-10-13 13:53:50]  status_code=0
[2025-10-13 13:53:50]  storage_token=
[2025-10-13 13:53:50]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6840970241/log.46676269._092661.job.log.tgz.1
[2025-10-13 13:53:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/92/9f/log.46676269._092661.job.log.tgz.1
[2025-10-13 13:53:50]  workdir=None
[2025-10-13 13:53:50] ]
[2025-10-13 13:53:50] 2025-10-13 11:52:56,861 | INFO     | transferring file log.46676269._092661.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6840970241/log.46676269._092661.job.log.tgz.1 to /local/data/boinc/
[2025-10-13 13:53:50] 2025-10-13 11:52:56,861 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6840970241/log.46676269._092661.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0926
[2025-10-13 13:53:50] 2025-10-13 11:52:56,874 | INFO     | adding to output.list: log.46676269._092661.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/92/9f/log.46676269._092661.job.log.tg
[2025-10-13 13:53:50] 2025-10-13 11:52:56,875 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 13:53:50] 2025-10-13 11:52:56,875 | INFO     | summary of transferred files:
[2025-10-13 13:53:50] 2025-10-13 11:52:56,875 | INFO     |  -- lfn=log.46676269._092661.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 13:53:50] 2025-10-13 11:52:56,875 | INFO     | stage-out finished correctly
[2025-10-13 13:53:50] 2025-10-13 11:52:56,906 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 13:53:50] 2025-10-13 11:52:56,934 | INFO     | job 6840970241 has state=finished
[2025-10-13 13:53:50] 2025-10-13 11:52:56,934 | INFO     | preparing for final server update for job 6840970241 in state='finished'
[2025-10-13 13:53:50] 2025-10-13 11:52:56,934 | INFO     | this job has now completed (state=finished)
[2025-10-13 13:53:50] 2025-10-13 11:52:56,934 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 13:53:50] 2025-10-13 11:52:56,934 | INFO     | log transfer has been attempted: DONE
[2025-10-13 13:53:50] 2025-10-13 11:52:56,934 | INFO     | job 6840970241 has finished - writing final server update
[2025-10-13 13:53:50] 2025-10-13 11:52:56,934 | INFO     | total number of processed events: 400 (read)
[2025-10-13 13:53:50] 2025-10-13 11:52:56,935 | INFO     | executing command: lscpu
[2025-10-13 13:53:50] 2025-10-13 11:52:56,947 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 13:53:50] 2025-10-13 11:52:57,154 | INFO     | time since job start (5482s) is within the limit (172800.0s)
[2025-10-13 13:53:50] 2025-10-13 11:52:58,772 | INFO     | monitor loop #421: job 0:6840970241 is in state 'finished'
[2025-10-13 13:53:50] 2025-10-13 11:52:58,773 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 13:53:50] 2025-10-13 11:52:59,159 | INFO     | time since job start (5484s) is within the limit (172800.0s)
[2025-10-13 13:53:50] 2025-10-13 11:53:01,160 | INFO     | time since job start (5486s) is within the limit (172800.0s)
[2025-10-13 13:53:50] 2025-10-13 11:53:01,275 | INFO     | monitor loop #422: job 0:6840970241 is in state 'finished'
[2025-10-13 13:53:50] 2025-10-13 11:53:01,275 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 13:53:50] 2025-10-13 11:53:02,273 | INFO     | PID=1691294 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 13:53:50] 2025-10-13 11:53:02,509 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 13:53:50] 2025-10-13 11:53:02,510 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 4299.696416666667
[2025-10-13 13:53:50] 2025-10-13 11:53:02,511 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6840970241/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 13:53:50] 2025-10-13 11:53:02,512 | INFO     | extracted standard info from prmon json
[2025-10-13 13:53:50] 2025-10-13 11:53:02,512 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 13:53:50] 2025-10-13 11:53:02,512 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 13:53:50] 2025-10-13 11:53:02,512 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 13:53:50] 2025-10-13 11:53:02,512 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 13:53:50] 2025-10-13 11:53:02,513 | INFO     | fitting pss+swap vs Time
[2025-10-13 13:53:50] 2025-10-13 11:53:02,513 | INFO     | sum of square deviations: 177275882.0
[2025-10-13 13:53:50] 2025-10-13 11:53:02,513 | INFO     | sum of deviations: -21308678478.0
[2025-10-13 13:53:50] 2025-10-13 11:53:02,513 | INFO     | mean x: 1760353727.0
[2025-10-13 13:53:50] 2025-10-13 11:53:02,513 | INFO     | mean y: 2540486.204819277
[2025-10-13 13:53:50] 2025-10-13 11:53:02,513 | INFO     | -- intersect: 211598224868.08813
[2025-10-13 13:53:50] 2025-10-13 11:53:02,513 | INFO     | intersect: 211598224868.08813
[2025-10-13 13:53:50] 2025-10-13 11:53:02,513 | INFO     | chi2: 0.1443844201788515
[2025-10-13 13:53:50] 2025-10-13 11:53:02,513 | INFO     | -- intersect: 211598224868.08813
[2025-10-13 13:53:50] 2025-10-13 11:53:02,513 | INFO     | current memory leak: -120.20 B/s (using 83 data points, chi2=0.14)
[2025-10-13 13:53:50] 2025-10-13 11:53:02,513 | INFO     | could have reported an average CPU frequency of 4315 MHz (7 samples)
[2025-10-13 13:53:50] 2025-10-13 11:53:02,513 | INFO     | ..............................
[2025-10-13 13:53:50] 2025-10-13 11:53:02,513 | INFO     | . Timing measurements:
[2025-10-13 13:53:50] 2025-10-13 11:53:02,513 | INFO     | . get job = 0 s
[2025-10-13 13:53:50] 2025-10-13 11:53:02,513 | INFO     | . initial setup = 1 s
[2025-10-13 13:53:50] 2025-10-13 11:53:02,513 | INFO     | . payload setup = 5 s
[2025-10-13 13:53:50] 2025-10-13 11:53:02,513 | INFO     | . stage-in = 0 s
[2025-10-13 13:53:50] 2025-10-13 11:53:02,513 | INFO     | . payload execution = 5453 s
[2025-10-13 13:53:50] 2025-10-13 11:53:02,514 | INFO     | . stage-out = 0 s
[2025-10-13 13:53:50] 2025-10-13 11:53:02,514 | INFO     | . log creation = 0 s
[2025-10-13 13:53:50] 2025-10-13 11:53:02,514 | INFO     | ..............................
[2025-10-13 13:53:50] 2025-10-13 11:53:02,544 | INFO     | 
[2025-10-13 13:53:50] 2025-10-13 11:53:02,544 | INFO     | job summary report
[2025-10-13 13:53:50] 2025-10-13 11:53:02,544 | INFO     | --------------------------------------------------
[2025-10-13 13:53:50] 2025-10-13 11:53:02,544 | INFO     | PanDA job id: 6840970241
[2025-10-13 13:53:50] 2025-10-13 11:53:02,544 | INFO     | task id: 46676269
[2025-10-13 13:53:50] 2025-10-13 11:53:02,544 | INFO     | errors: (none)
[2025-10-13 13:53:50] 2025-10-13 11:53:02,544 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 13:53:50] 2025-10-13 11:53:02,544 | INFO     | pilot state: finished 
[2025-10-13 13:53:50] 2025-10-13 11:53:02,545 | INFO     | transexitcode: 0
[2025-10-13 13:53:50] 2025-10-13 11:53:02,545 | INFO     | exeerrorcode: 0
[2025-10-13 13:53:50] 2025-10-13 11:53:02,545 | INFO     | exeerrordiag: 
[2025-10-13 13:53:50] 2025-10-13 11:53:02,545 | INFO     | exitcode: 0
[2025-10-13 13:53:50] 2025-10-13 11:53:02,545 | INFO     | exitmsg: OK
[2025-10-13 13:53:50] 2025-10-13 11:53:02,545 | INFO     | cpuconsumptiontime: 15708 s
[2025-10-13 13:53:50] 2025-10-13 11:53:02,545 | INFO     | nevents: 400
[2025-10-13 13:53:50] 2025-10-13 11:53:02,545 | INFO     | neventsw: 0
[2025-10-13 13:53:50] 2025-10-13 11:53:02,545 | INFO     | pid: 1697770
[2025-10-13 13:53:50] 2025-10-13 11:53:02,545 | INFO     | pgrp: 1697770
[2025-10-13 13:53:50] 2025-10-13 11:53:02,545 | INFO     | corecount: 3
[2025-10-13 13:53:50] 2025-10-13 11:53:02,545 | INFO     | event service: False
[2025-10-13 13:53:50] 2025-10-13 11:53:02,545 | INFO     | sizes: {0: 2348859, 5: 2349121, 11: 2349177, 5463: 2375852, 5464: 2384912, 5470: 2385050}
[2025-10-13 13:53:50] 2025-10-13 11:53:02,545 | INFO     | --------------------------------------------------
[2025-10-13 13:53:50] 2025-10-13 11:53:02,545 | INFO     | 
[2025-10-13 13:53:50] 2025-10-13 11:53:02,545 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-13 13:53:50] 2025-10-13 11:53:02,557 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 13:53:50] 2025-10-13 11:53:02,557 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 13:53:50] 2025-10-13 11:53:02,557 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 13:53:50] 2025-10-13 11:53:02,557 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 13:53:50] 2025-10-13 11:53:02,557 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 13:53:50] 2025-10-13 11:53:02,557 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 13:53:50] 2025-10-13 11:53:02,557 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 13:53:50] 2025-10-13 11:53:02,557 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 13:53:50] 2025-10-13 11:53:02,557 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 13:53:50] 2025-10-13 11:53:02,557 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 13:53:50] 2025-10-13 11:53:02,557 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 13:53:50] 2025-10-13 11:53:02,557 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 13:53:50] 2025-10-13 11:53:02,557 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 13:53:50] 2025-10-13 11:53:02,557 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 13:53:50] 2025-10-13 11:53:02,557 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 13:53:50] 2025-10-13 11:53:02,558 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 13:53:50] 2025-10-13 11:53:02,558 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 13:53:50] 2025-10-13 11:53:02,558 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 13:53:50] 2025-10-13 11:53:02,558 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 13:53:50] 2025-10-13 11:53:02,558 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 13:53:50] 2025-10-13 11:53:02,558 | INFO     | job 6840970241 has completed (purged errors)
[2025-10-13 13:53:50] 2025-10-13 11:53:02,558 | INFO     | overall cleanup function is called
[2025-10-13 13:53:50] 2025-10-13 11:53:03,564 | INFO     | --- collectZombieJob: --- 10, [1697770]
[2025-10-13 13:53:50] 2025-10-13 11:53:03,564 | INFO     | zombie collector waiting for pid 1697770
[2025-10-13 13:53:50] 2025-10-13 11:53:03,564 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 13:53:50] 2025-10-13 11:53:03,564 | INFO     | collected zombie processes
[2025-10-13 13:53:50] 2025-10-13 11:53:03,564 | INFO     | will attempt to kill all subprocesses of pid=1697770
[2025-10-13 13:53:50] 2025-10-13 11:53:03,623 | INFO     | process IDs to be killed: [1697770] (in reverse order)
[2025-10-13 13:53:50] 2025-10-13 11:53:03,653 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 13:53:50] 2025-10-13 11:53:03,653 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 13:53:50] 2025-10-13 11:53:03,654 | INFO     | did not find any defunct processes belonging to 1697770
[2025-10-13 13:53:50] 2025-10-13 11:53:03,655 | INFO     | did not find any defunct processes belonging to 1697770
[2025-10-13 13:53:50] 2025-10-13 11:53:03,655 | INFO     | ready for new job
[2025-10-13 13:53:50] 2025-10-13 11:53:03,656 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 13:53:50] 2025-10-13 11:53:03,656 | INFO     | ***************************************
[2025-10-13 13:53:50] 2025-10-13 11:53:03,656 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 13:53:50] 2025-10-13 11:53:03,656 | INFO     | ***************************************
[2025-10-13 13:53:50] 2025-10-13 11:53:03,656 | INFO     | 
[2025-10-13 13:53:50] 2025-10-13 11:53:03,657 | INFO     | architecture information:
[2025-10-13 13:53:50] 2025-10-13 11:53:03,657 | INFO     | executing command: cat /etc/os-release
[2025-10-13 13:53:50] 2025-10-13 11:53:03,667 | INFO     | cat /etc/os-release:
[2025-10-13 13:53:50] NAME="CentOS Linux"
[2025-10-13 13:53:50] VERSION="7 (Core)"
[2025-10-13 13:53:50] ID="centos"
[2025-10-13 13:53:50] ID_LIKE="rhel fedora"
[2025-10-13 13:53:50] VERSION_ID="7"
[2025-10-13 13:53:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 13:53:50] ANSI_COLOR="0;31"
[2025-10-13 13:53:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 13:53:50] HOME_URL="https://www.centos.org/"
[2025-10-13 13:53:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 13:53:50] 
[2025-10-13 13:53:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 13:53:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 13:53:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 13:53:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 13:53:50] 
[2025-10-13 13:53:50] 2025-10-13 11:53:03,667 | INFO     | ***************************************
[2025-10-13 13:53:50] 2025-10-13 11:53:04,171 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 13:53:50] 2025-10-13 11:53:04,184 | INFO     | sufficient remaining disk space (632883773440 B)
[2025-10-13 13:53:50] 2025-10-13 11:53:04,185 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 13:53:50] 2025-10-13 11:53:04,185 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 13:53:50] 2025-10-13 11:53:04,185 | INFO     | update_server=False
[2025-10-13 13:53:50] 2025-10-13 11:53:04,185 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 13:53:50] 2025-10-13 11:53:04,185 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:53:50] 2025-10-13 11:53:04,275 | INFO     | all job control threads have been joined
[2025-10-13 13:53:50] 2025-10-13 11:53:04,704 | INFO     | all data control threads have been joined
[2025-10-13 13:53:50] 2025-10-13 11:53:04,784 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:53:50] 2025-10-13 11:53:04,784 | INFO     | aborting loop
[2025-10-13 13:53:50] 2025-10-13 11:53:04,919 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 13:53:50] 2025-10-13 11:53:05,143 | INFO     | all payload control threads have been joined
[2025-10-13 13:53:50] 2025-10-13 11:53:05,188 | INFO     | [job] queue monitor thread has finished
[2025-10-13 13:53:50] 2025-10-13 11:53:05,190 | INFO     | [job] retrieve thread has finished
[2025-10-13 13:53:50] 2025-10-13 11:53:05,281 | INFO     | [job] control thread has finished
[2025-10-13 13:53:50] 2025-10-13 11:53:05,315 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 13:53:50] 2025-10-13 11:53:05,361 | INFO     | [data] copytool_in thread has finished
[2025-10-13 13:53:50] 2025-10-13 11:53:05,710 | INFO     | [data] control thread has finished
[2025-10-13 13:53:50] 2025-10-13 11:53:05,790 | INFO     | [job] job monitor thread has finished
[2025-10-13 13:53:50] 2025-10-13 11:53:05,886 | INFO     | [payload] failed_post thread has finished
[2025-10-13 13:53:50] 2025-10-13 11:53:05,996 | INFO     | [job] validate thread has finished
[2025-10-13 13:53:50] 2025-10-13 11:53:06,046 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 13:53:50] 2025-10-13 11:53:06,149 | INFO     | [payload] control thread has finished
[2025-10-13 13:53:50] 2025-10-13 11:53:06,269 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 13:53:50] 2025-10-13 11:53:06,523 | INFO     | [payload] validate_post thread has finished
[2025-10-13 13:53:50] 2025-10-13 11:53:06,925 | INFO     | [data] copytool_out thread has finished
[2025-10-13 13:53:50] 2025-10-13 11:53:07,445 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 13:53:50] 2025-10-13 11:53:11,452 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 13:53:50] 2025-10-13 11:53:15,111 | INFO     | job.realtimelogging is not enabled
[2025-10-13 13:53:50] 2025-10-13 11:53:16,117 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 13:53:50] 2025-10-13 11:53:34,375 | INFO     | PID=1691294 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 13:53:50] 2025-10-13 11:53:34,382 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 13:53:50] 2025-10-13 11:53:34,382 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 13:53:50] 2025-10-13 11:53:34,382 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 13:53:50] 2025-10-13 11:53:43,009 | INFO     | [monitor] cgroup control has ended
[2025-10-13 13:53:50] 2025-10-13 11:53:45,073 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139872989124416)>', '<ExcThread(monitor, started 139871985334016)>']
[2025-10-13 13:53:50] 2025-10-13 11:53:45,437 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 13:53:50] 2025-10-13 11:53:45,437 | INFO     | [monitor] control thread has ended
[2025-10-13 13:53:50] 2025-10-13 11:53:50,099 | INFO     | all workflow threads have been joined
[2025-10-13 13:53:50] 2025-10-13 11:53:50,099 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 13:53:50] 2025-10-13 11:53:50,100 | INFO     | traces error code: 0
[2025-10-13 13:53:50] 2025-10-13 11:53:50,100 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 13:53:50] 2025-10-13 11:53:50,149 [wrapper] ==== pilot stdout END ====
[2025-10-13 13:53:50] 2025-10-13 11:53:50,152 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 13:53:50] 2025-10-13 11:53:50,155 [wrapper] pilotpid: 1691294
[2025-10-13 13:53:50] 2025-10-13 11:53:50,157 [wrapper] Pilot exit status: 0
[2025-10-13 13:53:50] 2025-10-13 11:53:50,165 [wrapper] pandaids: 6840970241
[2025-10-13 13:53:50] 2025-10-13 11:53:50,184 [wrapper] cleanup supervisor_pilot 1713390 1691295
[2025-10-13 13:53:50] 2025-10-13 11:53:50,187 [wrapper] Test setup, not cleaning
[2025-10-13 13:53:50] 2025-10-13 11:53:50,189 [wrapper] apfmon messages muted
[2025-10-13 13:53:50] 2025-10-13 11:53:50,192 [wrapper] ==== wrapper stdout END ====
[2025-10-13 13:53:50] 2025-10-13 11:53:50,195 [wrapper] ==== wrapper stderr END ====
[2025-10-13 13:53:50]  *** Error codes and diagnostics ***
[2025-10-13 13:53:50]     "exeErrorCode": 0,
[2025-10-13 13:53:50]     "exeErrorDiag": "",
[2025-10-13 13:53:50]     "pilotErrorCode": 0,
[2025-10-13 13:53:50]     "pilotErrorDiag": "",
[2025-10-13 13:53:50]  *** Listing of results directory ***
[2025-10-13 13:53:50] total 407280
[2025-10-13 13:53:50] -rw-r--r-- 1 boinc boinc    557409 Oct 13 01:51 pilot3.tar.gz
[2025-10-13 13:53:50] -rw-r--r-- 1 boinc boinc      5112 Oct 13 01:57 queuedata.json
[2025-10-13 13:53:50] -rwx------ 1 boinc boinc     36292 Oct 13 01:58 runpilot2-wrapper.sh
[2025-10-13 13:53:50] -rw-r--r-- 1 boinc boinc       100 Oct 13 12:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 13:53:50] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 12:21 run_atlas
[2025-10-13 13:53:50] -rw-r--r-- 1 boinc boinc       105 Oct 13 12:21 job.xml
[2025-10-13 13:53:50] -rw-r--r-- 2 boinc boinc 220987066 Oct 13 12:21 EVNT.46676267._004675.pool.root.1
[2025-10-13 13:53:50] drwxrwx--x 2 boinc boinc      4096 Oct 13 12:21 shared
[2025-10-13 13:53:50] -rw-r--r-- 2 boinc boinc    569685 Oct 13 12:21 input.tar.gz
[2025-10-13 13:53:50] -rw-r--r-- 2 boinc boinc     15120 Oct 13 12:21 start_atlas.sh
[2025-10-13 13:53:50] -rw-r--r-- 1 boinc boinc         0 Oct 13 12:21 boinc_setup_complete
[2025-10-13 13:53:50] -rw-r--r-- 1 boinc boinc      6275 Oct 13 12:21 init_data.xml
[2025-10-13 13:53:50] -rw-r--r-- 1 boinc boinc         0 Oct 13 12:21 boinc_lockfile
[2025-10-13 13:53:50] -rw-r--r-- 1 boinc boinc      2549 Oct 13 12:21 pandaJob.out
[2025-10-13 13:53:50] -rw------- 1 boinc boinc    972497 Oct 13 12:21 agis_schedconf.cvmfs.json
[2025-10-13 13:53:50] -rw------- 1 boinc boinc   1560580 Oct 13 12:21 agis_ddmendpoints.agis.ALL.json
[2025-10-13 13:53:50] drwx------ 5 boinc boinc      4096 Oct 13 12:21 pilot3
[2025-10-13 13:53:50] -rw------- 1 boinc boinc 190031656 Oct 13 13:52 HITS.46676269._092661.pool.root.1
[2025-10-13 13:53:50] -rw-r--r-- 1 boinc boinc       529 Oct 13 13:52 boinc_task_state.xml
[2025-10-13 13:53:50] -rw------- 1 boinc boinc      1018 Oct 13 13:52 memory_monitor_summary.json
[2025-10-13 13:53:50] -rw------- 1 boinc boinc    267818 Oct 13 13:52 log.46676269._092661.job.log.tgz.1
[2025-10-13 13:53:50] -rw------- 1 boinc boinc      7759 Oct 13 13:53 heartbeat.json
[2025-10-13 13:53:50] -rw-r--r-- 1 boinc boinc        27 Oct 13 13:53 wrapper_checkpoint.txt
[2025-10-13 13:53:50] -rw-r--r-- 1 boinc boinc      8192 Oct 13 13:53 boinc_mmap_file
[2025-10-13 13:53:50] -rw------- 1 boinc boinc        95 Oct 13 13:53 pilot_heartbeat.json
[2025-10-13 13:53:50] -rw------- 1 boinc boinc      4824 Oct 13 13:53 pilotlog.txt
[2025-10-13 13:53:50] -rw------- 1 boinc boinc    801557 Oct 13 13:53 log.46676269._092661.job.log.1
[2025-10-13 13:53:50] -rw------- 1 boinc boinc       357 Oct 13 13:53 output.list
[2025-10-13 13:53:50] -rw-r--r-- 1 boinc boinc       620 Oct 13 13:53 runtime_log
[2025-10-13 13:53:50] -rw------- 1 boinc boinc   1085440 Oct 13 13:53 result.tar.gz
[2025-10-13 13:53:50] -rw-r--r-- 1 boinc boinc      8782 Oct 13 13:53 runtime_log.err
[2025-10-13 13:53:50] -rw------- 1 boinc boinc       659 Oct 13 13:53 KazMDmq8KS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmB7lNDmllD8Fn.diag
[2025-10-13 13:53:50] -rw-r--r-- 1 boinc boinc     21848 Oct 13 13:53 stderr.txt
[2025-10-13 13:53:50] HITS file was successfully produced:
[2025-10-13 13:53:50] -rw------- 1 boinc boinc 190031656 Oct 13 13:52 shared/HITS.pool.root.1
[2025-10-13 13:53:50]  *** Contents of shared directory: ***
[2025-10-13 13:53:50] total 403032
[2025-10-13 13:53:50] -rw-r--r-- 2 boinc boinc 220987066 Oct 13 12:21 ATLAS.root_0
[2025-10-13 13:53:50] -rw-r--r-- 2 boinc boinc    569685 Oct 13 12:21 input.tar.gz
[2025-10-13 13:53:50] -rw-r--r-- 2 boinc boinc     15120 Oct 13 12:21 start_atlas.sh
[2025-10-13 13:53:50] -rw------- 1 boinc boinc 190031656 Oct 13 13:52 HITS.pool.root.1
[2025-10-13 13:53:50] -rw------- 1 boinc boinc   1085440 Oct 13 13:53 result.tar.gz
13:53:52 (1687549): run_atlas exited; CPU time 15743.728509
13:53:52 (1687549): called boinc_finish(0)

</stderr_txt>
]]>

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