Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:13:34 (2586285): wrapper (7.7.26015): starting
18:13:34 (2586285): wrapper: running run_atlas (--nthreads 6)
[2025-10-13 18:13:34] Arguments: --nthreads 6
[2025-10-13 18:13:34] Threads: 6
[2025-10-13 18:13:34] Checking for CVMFS
[2025-10-13 18:13:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 18:13:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 18:13:34] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 18:13:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 18:13:35] 2.11.5.0 3102357 5067 91808 151656 2 187 42889429 52428801 860 130560 0 11482387 99.996 180650 15 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.35.143:3126 1
[2025-10-13 18:13:35] CVMFS is ok
[2025-10-13 18:13:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 18:13:35] Checking for apptainer binary...
[2025-10-13 18:13:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 18:13:35] Running /usr/bin/apptainer --version
[2025-10-13 18:13:35] apptainer version 1.3.6-1.el9
[2025-10-13 18:13:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 18:13:35] testio002
[2025-10-13 18:13:35] apptainer works
[2025-10-13 18:13:35] Set ATHENA_PROC_NUMBER=6
[2025-10-13 18:13:35] Set ATHENA_CORE_NUMBER=6
[2025-10-13 18:13:35] Starting ATLAS job with PandaID=6840834784
[2025-10-13 18:13:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 19:18:06]  *** The last 200 lines of the pilot log: ***
[2025-10-13 19:18:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 19:18:06]  replicas=None
[2025-10-13 19:18:06]  scope=mc23_13p6TeV
[2025-10-13 19:18:06]  status=None
[2025-10-13 19:18:06]  status_code=0
[2025-10-13 19:18:06]  storage_token=
[2025-10-13 19:18:06]  surl=/var/lib/boinc/slots/2/PanDA_Pilot-6840834784/log.46676269._090377.job.log.tgz.1
[2025-10-13 19:18:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/24/log.46676269._090377.job.log.tgz.1
[2025-10-13 19:18:06]  workdir=None
[2025-10-13 19:18:06] ]
[2025-10-13 19:18:06] 2025-10-13 10:17:32,755 | INFO     | transferring file log.46676269._090377.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-6840834784/log.46676269._090377.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-13 19:18:06] 2025-10-13 10:17:32,755 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-6840834784/log.46676269._090377.job.log.tgz.1 /var/lib/boinc/slots/2/log.46676269._090377.job
[2025-10-13 19:18:06] 2025-10-13 10:17:32,761 | INFO     | adding to output.list: log.46676269._090377.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/24/log.46676269._090377.job.log.tg
[2025-10-13 19:18:06] 2025-10-13 10:17:32,761 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 19:18:06] 2025-10-13 10:17:32,761 | INFO     | summary of transferred files:
[2025-10-13 19:18:06] 2025-10-13 10:17:32,761 | INFO     |  -- lfn=log.46676269._090377.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 19:18:06] 2025-10-13 10:17:32,761 | INFO     | stage-out finished correctly
[2025-10-13 19:18:06] 2025-10-13 10:17:32,788 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 19:18:06] 2025-10-13 10:17:33,191 | INFO     | time since job start (3831s) is within the limit (172800.0s)
[2025-10-13 19:18:06] 2025-10-13 10:17:33,845 | INFO     | job 6840834784 has state=finished
[2025-10-13 19:18:06] 2025-10-13 10:17:33,845 | INFO     | preparing for final server update for job 6840834784 in state='finished'
[2025-10-13 19:18:06] 2025-10-13 10:17:33,845 | INFO     | this job has now completed (state=finished)
[2025-10-13 19:18:06] 2025-10-13 10:17:33,845 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 19:18:06] 2025-10-13 10:17:33,845 | INFO     | log transfer has been attempted: DONE
[2025-10-13 19:18:06] 2025-10-13 10:17:33,846 | INFO     | job 6840834784 has finished - writing final server update
[2025-10-13 19:18:06] 2025-10-13 10:17:33,846 | INFO     | total number of processed events: 400 (read)
[2025-10-13 19:18:06] 2025-10-13 10:17:33,846 | INFO     | executing command: lscpu
[2025-10-13 19:18:06] 2025-10-13 10:17:33,853 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 19:18:06] 2025-10-13 10:17:34,246 | INFO     | PID=2590100 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 19:18:06] 2025-10-13 10:17:34,246 | INFO     | .. there are 2 such processes running
[2025-10-13 19:18:06] 2025-10-13 10:17:35,014 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 19:18:06] 2025-10-13 10:17:35,015 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4178.39325
[2025-10-13 19:18:06] 2025-10-13 10:17:35,016 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6840834784/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 19:18:06] 2025-10-13 10:17:35,016 | INFO     | extracted standard info from prmon json
[2025-10-13 19:18:06] 2025-10-13 10:17:35,016 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 19:18:06] 2025-10-13 10:17:35,016 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 19:18:06] 2025-10-13 10:17:35,016 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 19:18:06] 2025-10-13 10:17:35,016 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 19:18:06] 2025-10-13 10:17:35,017 | INFO     | fitting pss+swap vs Time
[2025-10-13 19:18:06] 2025-10-13 10:17:35,017 | INFO     | sum of square deviations: 54438230.0
[2025-10-13 19:18:06] 2025-10-13 10:17:35,017 | INFO     | sum of deviations: -3488389615.0
[2025-10-13 19:18:06] 2025-10-13 10:17:35,017 | INFO     | mean x: 1760348821.5
[2025-10-13 19:18:06] 2025-10-13 10:17:35,017 | INFO     | mean y: 2573606.1785714286
[2025-10-13 19:18:06] 2025-10-13 10:17:35,017 | INFO     | -- intersect: 112805332764.55107
[2025-10-13 19:18:06] 2025-10-13 10:17:35,017 | INFO     | intersect: 112805332764.55107
[2025-10-13 19:18:06] 2025-10-13 10:17:35,017 | INFO     | chi2: 0.03623625270118207
[2025-10-13 19:18:06] 2025-10-13 10:17:35,017 | INFO     | -- intersect: 112805332764.55107
[2025-10-13 19:18:06] 2025-10-13 10:17:35,017 | INFO     | current memory leak: -64.08 B/s (using 56 data points, chi2=0.04)
[2025-10-13 19:18:06] 2025-10-13 10:17:35,017 | INFO     | could have reported an average CPU frequency of 4267 MHz (6 samples)
[2025-10-13 19:18:06] 2025-10-13 10:17:35,017 | INFO     | ..............................
[2025-10-13 19:18:06] 2025-10-13 10:17:35,017 | INFO     | . Timing measurements:
[2025-10-13 19:18:06] 2025-10-13 10:17:35,017 | INFO     | . get job = 0 s
[2025-10-13 19:18:06] 2025-10-13 10:17:35,017 | INFO     | . initial setup = 4 s
[2025-10-13 19:18:06] 2025-10-13 10:17:35,017 | INFO     | . payload setup = 1 s
[2025-10-13 19:18:06] 2025-10-13 10:17:35,017 | INFO     | . stage-in = 0 s
[2025-10-13 19:18:06] 2025-10-13 10:17:35,018 | INFO     | . payload execution = 3812 s
[2025-10-13 19:18:06] 2025-10-13 10:17:35,018 | INFO     | . stage-out = 0 s
[2025-10-13 19:18:06] 2025-10-13 10:17:35,018 | INFO     | . log creation = 0 s
[2025-10-13 19:18:06] 2025-10-13 10:17:35,018 | INFO     | ..............................
[2025-10-13 19:18:06] 2025-10-13 10:17:35,044 | INFO     | 
[2025-10-13 19:18:06] 2025-10-13 10:17:35,044 | INFO     | job summary report
[2025-10-13 19:18:06] 2025-10-13 10:17:35,045 | INFO     | --------------------------------------------------
[2025-10-13 19:18:06] 2025-10-13 10:17:35,045 | INFO     | PanDA job id: 6840834784
[2025-10-13 19:18:06] 2025-10-13 10:17:35,045 | INFO     | task id: 46676269
[2025-10-13 19:18:06] 2025-10-13 10:17:35,045 | INFO     | errors: (none)
[2025-10-13 19:18:06] 2025-10-13 10:17:35,045 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 19:18:06] 2025-10-13 10:17:35,045 | INFO     | pilot state: finished 
[2025-10-13 19:18:06] 2025-10-13 10:17:35,045 | INFO     | transexitcode: 0
[2025-10-13 19:18:06] 2025-10-13 10:17:35,045 | INFO     | exeerrorcode: 0
[2025-10-13 19:18:06] 2025-10-13 10:17:35,045 | INFO     | exeerrordiag: 
[2025-10-13 19:18:06] 2025-10-13 10:17:35,045 | INFO     | exitcode: 0
[2025-10-13 19:18:06] 2025-10-13 10:17:35,045 | INFO     | exitmsg: OK
[2025-10-13 19:18:06] 2025-10-13 10:17:35,045 | INFO     | cpuconsumptiontime: 20905 s
[2025-10-13 19:18:06] 2025-10-13 10:17:35,045 | INFO     | nevents: 400
[2025-10-13 19:18:06] 2025-10-13 10:17:35,045 | INFO     | neventsw: 0
[2025-10-13 19:18:06] 2025-10-13 10:17:35,045 | INFO     | pid: 2596918
[2025-10-13 19:18:06] 2025-10-13 10:17:35,045 | INFO     | pgrp: 2596918
[2025-10-13 19:18:06] 2025-10-13 10:17:35,045 | INFO     | corecount: 6
[2025-10-13 19:18:06] 2025-10-13 10:17:35,045 | INFO     | event service: False
[2025-10-13 19:18:06] 2025-10-13 10:17:35,045 | INFO     | sizes: {0: 2348857, 1: 2349119, 10: 2349147, 3817: 2384009, 3820: 2384147}
[2025-10-13 19:18:06] 2025-10-13 10:17:35,045 | INFO     | --------------------------------------------------
[2025-10-13 19:18:06] 2025-10-13 10:17:35,045 | INFO     | 
[2025-10-13 19:18:06] 2025-10-13 10:17:35,045 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-10-13 19:18:06] 2025-10-13 10:17:35,050 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 19:18:06] 2025-10-13 10:17:35,051 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 19:18:06] 2025-10-13 10:17:35,051 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 19:18:06] 2025-10-13 10:17:35,051 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 19:18:06] 2025-10-13 10:17:35,051 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 19:18:06] 2025-10-13 10:17:35,051 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 19:18:06] 2025-10-13 10:17:35,051 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 19:18:06] 2025-10-13 10:17:35,051 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 19:18:06] 2025-10-13 10:17:35,051 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 19:18:06] 2025-10-13 10:17:35,051 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 19:18:06] 2025-10-13 10:17:35,051 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 19:18:06] 2025-10-13 10:17:35,051 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 19:18:06] 2025-10-13 10:17:35,051 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 19:18:06] 2025-10-13 10:17:35,051 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 19:18:06] 2025-10-13 10:17:35,051 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 19:18:06] 2025-10-13 10:17:35,051 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 19:18:06] 2025-10-13 10:17:35,051 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 19:18:06] 2025-10-13 10:17:35,051 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 19:18:06] 2025-10-13 10:17:35,051 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 19:18:06] 2025-10-13 10:17:35,051 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 19:18:06] 2025-10-13 10:17:35,051 | INFO     | job 6840834784 has completed (purged errors)
[2025-10-13 19:18:06] 2025-10-13 10:17:35,051 | INFO     | overall cleanup function is called
[2025-10-13 19:18:06] 2025-10-13 10:17:35,225 | WARNING  | process 2596918 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 19:18:06] 2025-10-13 10:17:35,248 | INFO     | using path: /var/lib/boinc/slots/2/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 19:18:06] 2025-10-13 10:17:35,279 | INFO     | number of running child processes to parent process 2596918: 1
[2025-10-13 19:18:06] 2025-10-13 10:17:35,279 | INFO     | maximum number of monitored processes: 6
[2025-10-13 19:18:06] 2025-10-13 10:17:35,279 | INFO     | aborting job monitoring since job object (job id=6840834784) has expired
[2025-10-13 19:18:06] 2025-10-13 10:17:36,057 | INFO     | --- collectZombieJob: --- 10, [2596918]
[2025-10-13 19:18:06] 2025-10-13 10:17:36,057 | INFO     | zombie collector waiting for pid 2596918
[2025-10-13 19:18:06] 2025-10-13 10:17:36,057 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 19:18:06] 2025-10-13 10:17:36,057 | INFO     | collected zombie processes
[2025-10-13 19:18:06] 2025-10-13 10:17:36,057 | INFO     | will attempt to kill all subprocesses of pid=2596918
[2025-10-13 19:18:06] 2025-10-13 10:17:36,088 | INFO     | process IDs to be killed: [2596918] (in reverse order)
[2025-10-13 19:18:06] 2025-10-13 10:17:36,102 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 19:18:06] 2025-10-13 10:17:36,102 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 19:18:06] 2025-10-13 10:17:36,103 | INFO     | did not find any defunct processes belonging to 2596918
[2025-10-13 19:18:06] 2025-10-13 10:17:36,104 | INFO     | did not find any defunct processes belonging to 2596918
[2025-10-13 19:18:06] 2025-10-13 10:17:36,104 | INFO     | ready for new job
[2025-10-13 19:18:06] 2025-10-13 10:17:36,104 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 19:18:06] 2025-10-13 10:17:36,104 | INFO     | ***************************************
[2025-10-13 19:18:06] 2025-10-13 10:17:36,104 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 19:18:06] 2025-10-13 10:17:36,104 | INFO     | ***************************************
[2025-10-13 19:18:06] 2025-10-13 10:17:36,104 | INFO     | 
[2025-10-13 19:18:06] 2025-10-13 10:17:36,105 | INFO     | architecture information:
[2025-10-13 19:18:06] 2025-10-13 10:17:36,105 | INFO     | executing command: cat /etc/os-release
[2025-10-13 19:18:06] 2025-10-13 10:17:36,109 | INFO     | cat /etc/os-release:
[2025-10-13 19:18:06] NAME="CentOS Linux"
[2025-10-13 19:18:06] VERSION="7 (Core)"
[2025-10-13 19:18:06] ID="centos"
[2025-10-13 19:18:06] ID_LIKE="rhel fedora"
[2025-10-13 19:18:06] VERSION_ID="7"
[2025-10-13 19:18:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 19:18:06] ANSI_COLOR="0;31"
[2025-10-13 19:18:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 19:18:06] HOME_URL="https://www.centos.org/"
[2025-10-13 19:18:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 19:18:06] 
[2025-10-13 19:18:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 19:18:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 19:18:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 19:18:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 19:18:06] 
[2025-10-13 19:18:06] 2025-10-13 10:17:36,109 | INFO     | ***************************************
[2025-10-13 19:18:06] 2025-10-13 10:17:36,611 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-10-13 19:18:06] 2025-10-13 10:17:36,617 | INFO     | sufficient remaining disk space (300962283520 B)
[2025-10-13 19:18:06] 2025-10-13 10:17:36,617 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 19:18:06] 2025-10-13 10:17:36,617 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 19:18:06] 2025-10-13 10:17:36,617 | INFO     | update_server=False
[2025-10-13 19:18:06] 2025-10-13 10:17:36,617 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 19:18:06] 2025-10-13 10:17:36,617 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 19:18:06] 2025-10-13 10:17:36,617 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 19:18:06] 2025-10-13 10:17:36,617 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 19:18:06] 2025-10-13 10:17:36,617 | INFO     | aborting loop
[2025-10-13 19:18:06] 2025-10-13 10:17:36,690 | INFO     | all data control threads have been joined
[2025-10-13 19:18:06] 2025-10-13 10:17:37,454 | INFO     | all payload control threads have been joined
[2025-10-13 19:18:06] 2025-10-13 10:17:37,622 | INFO     | [job] job monitor thread has finished
[2025-10-13 19:18:06] 2025-10-13 10:17:37,623 | INFO     | [job] retrieve thread has finished
[2025-10-13 19:18:06] 2025-10-13 10:17:37,623 | INFO     | [job] queue monitor thread has finished
[2025-10-13 19:18:06] 2025-10-13 10:17:37,695 | INFO     | [data] control thread has finished
[2025-10-13 19:18:06] 2025-10-13 10:17:37,721 | INFO     | [payload] failed_post thread has finished
[2025-10-13 19:18:06] 2025-10-13 10:17:37,765 | INFO     | all job control threads have been joined
[2025-10-13 19:18:06] 2025-10-13 10:17:37,995 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 19:18:06] 2025-10-13 10:17:38,323 | INFO     | [payload] validate_post thread has finished
[2025-10-13 19:18:06] 2025-10-13 10:17:38,459 | INFO     | [payload] control thread has finished
[2025-10-13 19:18:06] 2025-10-13 10:17:38,623 | INFO     | [data] copytool_out thread has finished
[2025-10-13 19:18:06] 2025-10-13 10:17:38,771 | INFO     | [job] control thread has finished
[2025-10-13 19:18:06] 2025-10-13 10:17:38,818 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 19:18:06] 2025-10-13 10:17:38,919 | INFO     | [job] validate thread has finished
[2025-10-13 19:18:06] 2025-10-13 10:17:39,018 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 19:18:06] 2025-10-13 10:17:39,022 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 19:18:06] 2025-10-13 10:17:39,109 | INFO     | [data] copytool_in thread has finished
[2025-10-13 19:18:06] 2025-10-13 10:17:42,824 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 19:18:06] 2025-10-13 10:17:47,560 | INFO     | job.realtimelogging is not enabled
[2025-10-13 19:18:06] 2025-10-13 10:17:48,416 | INFO     | [monitor] cgroup control has ended
[2025-10-13 19:18:06] 2025-10-13 10:17:48,565 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 19:18:06] 2025-10-13 10:17:49,952 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140214833645376)>', '<ExcThread(monitor, started 140214349580032)>']
[2025-10-13 19:18:06] 2025-10-13 10:17:54,977 | INFO     | all workflow threads have been joined
[2025-10-13 19:18:06] 2025-10-13 10:17:54,977 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 19:18:06] 2025-10-13 10:17:54,978 | INFO     | traces error code: 0
[2025-10-13 19:18:06] 2025-10-13 10:17:54,978 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 19:18:06] 2025-10-13 10:18:06,354 | INFO     | PID=2590100 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 19:18:06] 2025-10-13 10:18:06,358 | INFO     | .. there are 2 such processes running
[2025-10-13 19:18:06] 2025-10-13 10:18:06,358 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 19:18:06] 2025-10-13 10:18:06,358 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 19:18:06] 2025-10-13 10:18:06,358 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 19:18:06] 2025-10-13 10:18:06,358 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 19:18:06] 2025-10-13 10:18:06,358 | INFO     | [monitor] control thread has ended
[2025-10-13 19:18:06] 2025-10-13 10:18:06,391 [wrapper] ==== pilot stdout END ====
[2025-10-13 19:18:06] 2025-10-13 10:18:06,392 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 19:18:06] 2025-10-13 10:18:06,393 [wrapper] pilotpid: 2590100
[2025-10-13 19:18:06] 2025-10-13 10:18:06,393 [wrapper] Pilot exit status: 0
[2025-10-13 19:18:06] 2025-10-13 10:18:06,396 [wrapper] pandaids: 6840834784
[2025-10-13 19:18:06] 2025-10-13 10:18:06,403 [wrapper] cleanup supervisor_pilot 2608624 2590101
[2025-10-13 19:18:06] 2025-10-13 10:18:06,403 [wrapper] Test setup, not cleaning
[2025-10-13 19:18:06] 2025-10-13 10:18:06,404 [wrapper] apfmon messages muted
[2025-10-13 19:18:06] 2025-10-13 10:18:06,405 [wrapper] ==== wrapper stdout END ====
[2025-10-13 19:18:06] 2025-10-13 10:18:06,405 [wrapper] ==== wrapper stderr END ====
[2025-10-13 19:18:06]  *** Error codes and diagnostics ***
[2025-10-13 19:18:06]     "exeErrorCode": 0,
[2025-10-13 19:18:06]     "exeErrorDiag": "",
[2025-10-13 19:18:06]     "pilotErrorCode": 0,
[2025-10-13 19:18:06]     "pilotErrorDiag": "",
[2025-10-13 19:18:06]  *** Listing of results directory ***
[2025-10-13 19:18:06] total 409332
[2025-10-13 19:18:06] -rw-r--r--. 1 boinc boinc    557409 Oct 13 06:31 pilot3.tar.gz
[2025-10-13 19:18:06] -rw-r--r--. 1 boinc boinc      5112 Oct 13 06:48 queuedata.json
[2025-10-13 19:18:06] -rwx------. 1 boinc boinc     36292 Oct 13 06:49 runpilot2-wrapper.sh
[2025-10-13 19:18:06] -rw-r--r--. 1 boinc boinc       100 Oct 13 18:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 19:18:06] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 18:13 run_atlas
[2025-10-13 19:18:06] -rw-r--r--. 1 boinc boinc       105 Oct 13 18:13 job.xml
[2025-10-13 19:18:06] -rw-r--r--. 2 boinc boinc 221350193 Oct 13 18:13 EVNT.46676267._004843.pool.root.1
[2025-10-13 19:18:06] -rw-r--r--. 2 boinc boinc     15120 Oct 13 18:13 start_atlas.sh
[2025-10-13 19:18:06] drwxrwx--x. 2 boinc boinc        68 Oct 13 18:13 shared
[2025-10-13 19:18:06] -rw-r--r--. 2 boinc boinc    569684 Oct 13 18:13 input.tar.gz
[2025-10-13 19:18:06] -rw-r--r--. 1 boinc boinc         0 Oct 13 18:13 boinc_lockfile
[2025-10-13 19:18:06] -rw-r--r--. 1 boinc boinc      2550 Oct 13 18:13 pandaJob.out
[2025-10-13 19:18:06] -rw-------. 1 boinc boinc    972849 Oct 13 18:13 agis_schedconf.cvmfs.json
[2025-10-13 19:18:06] -rw-------. 1 boinc boinc   1560580 Oct 13 18:13 agis_ddmendpoints.agis.ALL.json
[2025-10-13 19:18:06] drwx------. 5 boinc boinc      4096 Oct 13 18:13 pilot3
[2025-10-13 19:18:06] -rw-r--r--. 1 boinc boinc      9635 Oct 13 19:01 init_data.xml
[2025-10-13 19:18:06] -rw-------. 1 boinc boinc 192172674 Oct 13 19:17 HITS.46676269._090377.pool.root.1
[2025-10-13 19:18:06] -rw-r--r--. 1 boinc boinc       529 Oct 13 19:17 boinc_task_state.xml
[2025-10-13 19:18:06] -rw-------. 1 boinc boinc      1026 Oct 13 19:17 memory_monitor_summary.json
[2025-10-13 19:18:06] -rw-------. 1 boinc boinc    292708 Oct 13 19:17 log.46676269._090377.job.log.tgz.1
[2025-10-13 19:18:06] -rw-------. 1 boinc boinc      7794 Oct 13 19:17 heartbeat.json
[2025-10-13 19:18:06] -rw-r--r--. 1 boinc boinc        27 Oct 13 19:17 wrapper_checkpoint.txt
[2025-10-13 19:18:06] -rw-r--r--. 1 boinc boinc      8192 Oct 13 19:17 boinc_mmap_file
[2025-10-13 19:18:06] -rw-------. 1 boinc boinc       822 Oct 13 19:18 pilotlog.txt
[2025-10-13 19:18:06] -rw-------. 1 boinc boinc        95 Oct 13 19:18 pilot_heartbeat.json
[2025-10-13 19:18:06] -rw-------. 1 boinc boinc    579771 Oct 13 19:18 log.46676269._090377.job.log.1
[2025-10-13 19:18:06] -rw-------. 1 boinc boinc       357 Oct 13 19:18 output.list
[2025-10-13 19:18:06] -rw-r--r--. 1 boinc boinc       620 Oct 13 19:18 runtime_log
[2025-10-13 19:18:06] -rw-------. 1 boinc boinc    890880 Oct 13 19:18 result.tar.gz
[2025-10-13 19:18:06] -rw-r--r--. 1 boinc boinc      8661 Oct 13 19:18 runtime_log.err
[2025-10-13 19:18:06] -rw-------. 1 boinc boinc       641 Oct 13 19:18 FP5KDmQ7IS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmd6UMDm8JCOPn.diag
[2025-10-13 19:18:06] -rw-r--r--. 1 boinc boinc     21553 Oct 13 19:18 stderr.txt
[2025-10-13 19:18:06] HITS file was successfully produced:
[2025-10-13 19:18:06] -rw-------. 1 boinc boinc 192172674 Oct 13 19:17 shared/HITS.pool.root.1
[2025-10-13 19:18:06]  *** Contents of shared directory: ***
[2025-10-13 19:18:06] total 405284
[2025-10-13 19:18:06] -rw-r--r--. 2 boinc boinc 221350193 Oct 13 18:13 ATLAS.root_0
[2025-10-13 19:18:06] -rw-r--r--. 2 boinc boinc     15120 Oct 13 18:13 start_atlas.sh
[2025-10-13 19:18:06] -rw-r--r--. 2 boinc boinc    569684 Oct 13 18:13 input.tar.gz
[2025-10-13 19:18:06] -rw-------. 1 boinc boinc 192172674 Oct 13 19:17 HITS.pool.root.1
[2025-10-13 19:18:06] -rw-------. 1 boinc boinc    890880 Oct 13 19:18 result.tar.gz
19:18:08 (2586285): run_atlas exited; CPU time 20924.519225
19:18:08 (2586285): called boinc_finish(0)

</stderr_txt>
]]>

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