Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:41:38 (2482561): wrapper (7.7.26015): starting
22:41:38 (2482561): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 22:41:38] Arguments: --nthreads 8
[2025-10-12 22:41:38] Threads: 8
[2025-10-12 22:41:38] Checking for CVMFS
[2025-10-12 22:41:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 22:41:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 22:41:39] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 22:41:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 22:41:39] 2.13.1.0 4140 5091 71892 151645 1 188 35889728 39288833 2030 16776704 0 16995710 99.998 172721 34829 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 22:41:39] CVMFS is ok
[2025-10-12 22:41:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 22:41:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 22:41:39] Further information can be found at the LHC@home message board.
[2025-10-12 22:41:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 22:41:39] Checking for apptainer binary...
[2025-10-12 22:41:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 22:41:39] Running /usr/bin/apptainer --version
[2025-10-12 22:41:39] apptainer version 1.4.3-1.el9
[2025-10-12 22:41:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 22:41:39] c-210-16.aglt2.org
[2025-10-12 22:41:39] apptainer works
[2025-10-12 22:41:39] Set ATHENA_PROC_NUMBER=8
[2025-10-12 22:41:39] Set ATHENA_CORE_NUMBER=8
[2025-10-12 22:41:39] Starting ATLAS job with PandaID=6840714553
[2025-10-12 22:41:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:51:21]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:51:21]  replicas=None
[2025-10-12 23:51:21]  scope=mc23_13p6TeV
[2025-10-12 23:51:21]  status=None
[2025-10-12 23:51:21]  status_code=0
[2025-10-12 23:51:21]  storage_token=
[2025-10-12 23:51:21]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6840714553/log.46676269._087949.job.log.tgz.1
[2025-10-12 23:51:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/62/7c/log.46676269._087949.job.log.tgz.1
[2025-10-12 23:51:21]  workdir=None
[2025-10-12 23:51:21] ]
[2025-10-12 23:51:21] 2025-10-13 03:50:43,781 | INFO     | transferring file log.46676269._087949.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6840714553/log.46676269._087949.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 23:51:21] 2025-10-13 03:50:43,781 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6840714553/log.46676269._087949.job.log.tgz.1 /tmp/boinchome/slots/1/log.46676269._087949.job
[2025-10-12 23:51:21] 2025-10-13 03:50:43,792 | INFO     | adding to output.list: log.46676269._087949.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/62/7c/log.46676269._087949.job.log.tg
[2025-10-12 23:51:21] 2025-10-13 03:50:43,793 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 23:51:21] 2025-10-13 03:50:43,793 | INFO     | summary of transferred files:
[2025-10-12 23:51:21] 2025-10-13 03:50:43,793 | INFO     |  -- lfn=log.46676269._087949.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 23:51:21] 2025-10-13 03:50:43,793 | INFO     | stage-out finished correctly
[2025-10-12 23:51:21] 2025-10-13 03:50:43,888 | INFO     | monitor loop #312: job 0:6840714553 is in state 'finished'
[2025-10-12 23:51:21] 2025-10-13 03:50:43,888 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:51:21] 2025-10-13 03:50:44,241 | INFO     | time since job start (4137s) is within the limit (172800.0s)
[2025-10-12 23:51:21] 2025-10-13 03:50:44,241 | INFO     | 4139s have passed since pilot start - server update state is 'RUNNING'
[2025-10-12 23:51:21] 2025-10-13 03:50:46,247 | INFO     | time since job start (4139s) is within the limit (172800.0s)
[2025-10-12 23:51:21] 2025-10-13 03:50:46,391 | INFO     | monitor loop #313: job 0:6840714553 is in state 'finished'
[2025-10-12 23:51:21] 2025-10-13 03:50:46,392 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:51:21] 2025-10-13 03:50:47,334 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 23:51:21] 2025-10-13 03:50:47,424 | INFO     | job 6840714553 has state=finished
[2025-10-12 23:51:21] 2025-10-13 03:50:47,424 | INFO     | preparing for final server update for job 6840714553 in state='finished'
[2025-10-12 23:51:21] 2025-10-13 03:50:47,424 | INFO     | this job has now completed (state=finished)
[2025-10-12 23:51:21] 2025-10-13 03:50:47,425 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 23:51:21] 2025-10-13 03:50:47,425 | INFO     | log transfer has been attempted: DONE
[2025-10-12 23:51:21] 2025-10-13 03:50:47,425 | INFO     | job 6840714553 has finished - writing final server update
[2025-10-12 23:51:21] 2025-10-13 03:50:47,425 | INFO     | total number of processed events: 400 (read)
[2025-10-12 23:51:21] 2025-10-13 03:50:47,426 | INFO     | executing command: lscpu
[2025-10-12 23:51:21] 2025-10-13 03:50:47,451 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 23:51:21] 2025-10-13 03:50:48,252 | INFO     | time since job start (4141s) is within the limit (172800.0s)
[2025-10-12 23:51:21] 2025-10-13 03:50:48,899 | INFO     | monitor loop #314: job 0:6840714553 is in state 'finished'
[2025-10-12 23:51:21] 2025-10-13 03:50:48,899 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:51:21] 2025-10-13 03:50:49,923 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 23:51:21] 2025-10-13 03:50:49,927 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2779.47195
[2025-10-12 23:51:21] 2025-10-13 03:50:49,930 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6840714553/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 23:51:21] 2025-10-13 03:50:49,931 | INFO     | extracted standard info from prmon json
[2025-10-12 23:51:21] 2025-10-13 03:50:49,931 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 23:51:21] 2025-10-13 03:50:49,931 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 23:51:21] 2025-10-13 03:50:49,931 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 23:51:21] 2025-10-13 03:50:49,931 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:51:21] 2025-10-13 03:50:49,932 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:51:21] 2025-10-13 03:50:49,933 | INFO     | sum of square deviations: 70364110.0
[2025-10-12 23:51:21] 2025-10-13 03:50:49,933 | INFO     | sum of deviations: -5165240391.999998
[2025-10-12 23:51:21] 2025-10-13 03:50:49,933 | INFO     | mean x: 1760325462.0
[2025-10-12 23:51:21] 2025-10-13 03:50:49,933 | INFO     | mean y: 2616546.1147540985
[2025-10-12 23:51:21] 2025-10-13 03:50:49,933 | INFO     | -- intersect: 129223382351.1318
[2025-10-12 23:51:21] 2025-10-13 03:50:49,933 | INFO     | intersect: 129223382351.1318
[2025-10-12 23:51:21] 2025-10-13 03:50:49,933 | INFO     | chi2: 0.02402490582057444
[2025-10-12 23:51:21] 2025-10-13 03:50:49,933 | INFO     | -- intersect: 129223382351.1318
[2025-10-12 23:51:21] 2025-10-13 03:50:49,933 | INFO     | current memory leak: -73.41 B/s (using 61 data points, chi2=0.02)
[2025-10-12 23:51:21] 2025-10-13 03:50:49,934 | INFO     | could have reported an average CPU frequency of 2756 MHz (6 samples)
[2025-10-12 23:51:21] 2025-10-13 03:50:49,934 | INFO     | ..............................
[2025-10-12 23:51:21] 2025-10-13 03:50:49,934 | INFO     | . Timing measurements:
[2025-10-12 23:51:21] 2025-10-13 03:50:49,934 | INFO     | . get job = 0 s
[2025-10-12 23:51:21] 2025-10-13 03:50:49,934 | INFO     | . initial setup = 2 s
[2025-10-12 23:51:21] 2025-10-13 03:50:49,934 | INFO     | . payload setup = 3 s
[2025-10-12 23:51:21] 2025-10-13 03:50:49,934 | INFO     | . stage-in = 0 s
[2025-10-12 23:51:21] 2025-10-13 03:50:49,934 | INFO     | . payload execution = 4115 s
[2025-10-12 23:51:21] 2025-10-13 03:50:49,934 | INFO     | . stage-out = 0 s
[2025-10-12 23:51:21] 2025-10-13 03:50:49,934 | INFO     | . log creation = 0 s
[2025-10-12 23:51:21] 2025-10-13 03:50:49,934 | INFO     | ..............................
[2025-10-12 23:51:21] 2025-10-13 03:50:49,990 | INFO     | 
[2025-10-12 23:51:21] 2025-10-13 03:50:49,991 | INFO     | job summary report
[2025-10-12 23:51:21] 2025-10-13 03:50:49,991 | INFO     | --------------------------------------------------
[2025-10-12 23:51:21] 2025-10-13 03:50:49,991 | INFO     | PanDA job id: 6840714553
[2025-10-12 23:51:21] 2025-10-13 03:50:49,991 | INFO     | task id: 46676269
[2025-10-12 23:51:21] 2025-10-13 03:50:49,991 | INFO     | errors: (none)
[2025-10-12 23:51:21] 2025-10-13 03:50:49,991 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:51:21] 2025-10-13 03:50:49,991 | INFO     | pilot state: finished 
[2025-10-12 23:51:21] 2025-10-13 03:50:49,992 | INFO     | transexitcode: 0
[2025-10-12 23:51:21] 2025-10-13 03:50:49,992 | INFO     | exeerrorcode: 0
[2025-10-12 23:51:21] 2025-10-13 03:50:49,992 | INFO     | exeerrordiag: 
[2025-10-12 23:51:21] 2025-10-13 03:50:49,992 | INFO     | exitcode: 0
[2025-10-12 23:51:21] 2025-10-13 03:50:49,992 | INFO     | exitmsg: OK
[2025-10-12 23:51:21] 2025-10-13 03:50:49,992 | INFO     | cpuconsumptiontime: 31204 s
[2025-10-12 23:51:21] 2025-10-13 03:50:49,992 | INFO     | nevents: 400
[2025-10-12 23:51:21] 2025-10-13 03:50:49,992 | INFO     | neventsw: 0
[2025-10-12 23:51:21] 2025-10-13 03:50:49,992 | INFO     | pid: 2493061
[2025-10-12 23:51:21] 2025-10-13 03:50:49,993 | INFO     | pgrp: 2493061
[2025-10-12 23:51:21] 2025-10-13 03:50:49,993 | INFO     | corecount: 8
[2025-10-12 23:51:21] 2025-10-13 03:50:49,993 | INFO     | event service: False
[2025-10-12 23:51:21] 2025-10-13 03:50:49,993 | INFO     | sizes: {0: 2348857, 1: 2348857, 3: 2349147, 11: 2349175, 4122: 2375159, 4123: 2384157, 4126: 2384341, 4129: 2384535}
[2025-10-12 23:51:21] 2025-10-13 03:50:49,993 | INFO     | --------------------------------------------------
[2025-10-12 23:51:21] 2025-10-13 03:50:49,993 | INFO     | 
[2025-10-12 23:51:21] 2025-10-13 03:50:49,993 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 23:51:21] 2025-10-13 03:50:50,005 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:51:21] 2025-10-13 03:50:50,006 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:51:21] 2025-10-13 03:50:50,006 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:51:21] 2025-10-13 03:50:50,006 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:51:21] 2025-10-13 03:50:50,006 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:51:21] 2025-10-13 03:50:50,006 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:51:21] 2025-10-13 03:50:50,006 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:51:21] 2025-10-13 03:50:50,006 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:51:21] 2025-10-13 03:50:50,006 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:51:21] 2025-10-13 03:50:50,007 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:51:21] 2025-10-13 03:50:50,007 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:51:21] 2025-10-13 03:50:50,007 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:51:21] 2025-10-13 03:50:50,007 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:51:21] 2025-10-13 03:50:50,007 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:51:21] 2025-10-13 03:50:50,007 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:51:21] 2025-10-13 03:50:50,007 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:51:21] 2025-10-13 03:50:50,007 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:51:21] 2025-10-13 03:50:50,008 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:51:21] 2025-10-13 03:50:50,008 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:51:21] 2025-10-13 03:50:50,008 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:51:21] 2025-10-13 03:50:50,008 | INFO     | job 6840714553 has completed (purged errors)
[2025-10-12 23:51:21] 2025-10-13 03:50:50,008 | INFO     | overall cleanup function is called
[2025-10-12 23:51:21] 2025-10-13 03:50:51,016 | INFO     | --- collectZombieJob: --- 10, [2493061]
[2025-10-12 23:51:21] 2025-10-13 03:50:51,017 | INFO     | zombie collector waiting for pid 2493061
[2025-10-12 23:51:21] 2025-10-13 03:50:51,017 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:51:21] 2025-10-13 03:50:51,017 | INFO     | collected zombie processes
[2025-10-12 23:51:21] 2025-10-13 03:50:51,017 | INFO     | will attempt to kill all subprocesses of pid=2493061
[2025-10-12 23:51:21] 2025-10-13 03:50:51,170 | INFO     | process IDs to be killed: [2493061] (in reverse order)
[2025-10-12 23:51:21] 2025-10-13 03:50:51,207 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:51:21] 2025-10-13 03:50:51,207 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:51:21] 2025-10-13 03:50:51,211 | INFO     | did not find any defunct processes belonging to 2493061
[2025-10-12 23:51:21] 2025-10-13 03:50:51,213 | INFO     | did not find any defunct processes belonging to 2493061
[2025-10-12 23:51:21] 2025-10-13 03:50:51,214 | INFO     | ready for new job
[2025-10-12 23:51:21] 2025-10-13 03:50:51,214 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:51:21] 2025-10-13 03:50:51,215 | INFO     | ***************************************
[2025-10-12 23:51:21] 2025-10-13 03:50:51,215 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:51:21] 2025-10-13 03:50:51,215 | INFO     | ***************************************
[2025-10-12 23:51:21] 2025-10-13 03:50:51,215 | INFO     | 
[2025-10-12 23:51:21] 2025-10-13 03:50:51,216 | INFO     | architecture information:
[2025-10-12 23:51:21] 2025-10-13 03:50:51,216 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:51:21] 2025-10-13 03:50:51,225 | INFO     | cat /etc/os-release:
[2025-10-12 23:51:21] NAME="CentOS Linux"
[2025-10-12 23:51:21] VERSION="7 (Core)"
[2025-10-12 23:51:21] ID="centos"
[2025-10-12 23:51:21] ID_LIKE="rhel fedora"
[2025-10-12 23:51:21] VERSION_ID="7"
[2025-10-12 23:51:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:51:21] ANSI_COLOR="0;31"
[2025-10-12 23:51:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:51:21] HOME_URL="https://www.centos.org/"
[2025-10-12 23:51:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:51:21] 
[2025-10-12 23:51:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:51:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:51:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:51:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:51:21] 
[2025-10-12 23:51:21] 2025-10-13 03:50:51,225 | INFO     | ***************************************
[2025-10-12 23:51:21] 2025-10-13 03:50:51,728 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 23:51:21] 2025-10-13 03:50:51,738 | INFO     | sufficient remaining disk space (51210354688 B)
[2025-10-12 23:51:21] 2025-10-13 03:50:51,738 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:51:21] 2025-10-13 03:50:51,738 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:51:21] 2025-10-13 03:50:51,738 | INFO     | update_server=False
[2025-10-12 23:51:21] 2025-10-13 03:50:51,738 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:51:21] 2025-10-13 03:50:51,738 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:51:21] 2025-10-13 03:50:51,803 | INFO     | all payload control threads have been joined
[2025-10-12 23:51:21] 2025-10-13 03:50:51,857 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:51:21] 2025-10-13 03:50:52,407 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:51:21] 2025-10-13 03:50:52,408 | INFO     | aborting loop
[2025-10-12 23:51:21] 2025-10-13 03:50:52,506 | INFO     | all data control threads have been joined
[2025-10-12 23:51:21] 2025-10-13 03:50:52,515 | INFO     | all job control threads have been joined
[2025-10-12 23:51:21] 2025-10-13 03:50:52,744 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:51:21] 2025-10-13 03:50:52,744 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:51:21] 2025-10-13 03:50:52,808 | INFO     | [payload] control thread has finished
[2025-10-12 23:51:21] 2025-10-13 03:50:53,013 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:51:21] 2025-10-13 03:50:53,072 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:51:21] 2025-10-13 03:50:53,285 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:51:21] 2025-10-13 03:50:53,411 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:51:21] 2025-10-13 03:50:53,428 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:51:21] 2025-10-13 03:50:53,510 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:51:21] 2025-10-13 03:50:53,511 | INFO     | [data] control thread has finished
[2025-10-12 23:51:21] 2025-10-13 03:50:53,520 | INFO     | [job] control thread has finished
[2025-10-12 23:51:21] 2025-10-13 03:50:53,540 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:51:21] 2025-10-13 03:50:53,554 | INFO     | [job] validate thread has finished
[2025-10-12 23:51:21] 2025-10-13 03:50:53,862 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:51:21] 2025-10-13 03:50:53,926 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:51:21] 2025-10-13 03:50:53,992 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:51:21] 2025-10-13 03:50:54,200 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:51:21] 2025-10-13 03:50:57,431 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:51:21] 2025-10-13 03:50:58,838 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139754801456960)>', '<ExcThread(monitor, started 139753856947968)>']
[2025-10-12 23:51:21] 2025-10-13 03:51:03,863 | INFO     | all workflow threads have been joined
[2025-10-12 23:51:21] 2025-10-13 03:51:03,864 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:51:21] 2025-10-13 03:51:03,864 | INFO     | traces error code: 0
[2025-10-12 23:51:21] 2025-10-13 03:51:03,864 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:51:21] 2025-10-13 03:51:21,504 | INFO     | PID=2486284 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 23:51:21] 2025-10-13 03:51:21,504 | INFO     | .. there are 5 such processes running
[2025-10-12 23:51:21] 2025-10-13 03:51:21,504 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:51:21] 2025-10-13 03:51:21,504 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:51:21] 2025-10-13 03:51:21,504 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:51:21] 2025-10-13 03:51:21,505 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:51:21] 2025-10-13 03:51:21,505 | INFO     | [monitor] control thread has ended
[2025-10-12 23:51:21] 2025-10-13 03:51:21,572 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:51:21] 2025-10-13 03:51:21,575 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:51:21] 2025-10-13 03:51:21,576 [wrapper] pilotpid: 2486284
[2025-10-12 23:51:21] 2025-10-13 03:51:21,578 [wrapper] Pilot exit status: 0
[2025-10-12 23:51:21] 2025-10-13 03:51:21,586 [wrapper] pandaids: 6840714553
[2025-10-12 23:51:21] 2025-10-13 03:51:21,610 [wrapper] cleanup supervisor_pilot 2606493 2486285
[2025-10-12 23:51:21] 2025-10-13 03:51:21,613 [wrapper] Test setup, not cleaning
[2025-10-12 23:51:21] 2025-10-13 03:51:21,614 [wrapper] apfmon messages muted
[2025-10-12 23:51:21] 2025-10-13 03:51:21,616 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:51:21] 2025-10-13 03:51:21,618 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:51:21]  *** Error codes and diagnostics ***
[2025-10-12 23:51:21]     "exeErrorCode": 0,
[2025-10-12 23:51:21]     "exeErrorDiag": "",
[2025-10-12 23:51:21]     "pilotErrorCode": 0,
[2025-10-12 23:51:21]     "pilotErrorDiag": "",
[2025-10-12 23:51:21]  *** Listing of results directory ***
[2025-10-12 23:51:21] total 418920
[2025-10-12 23:51:21] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 15:28 pilot3.tar.gz
[2025-10-12 23:51:21] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 15:47 queuedata.json
[2025-10-12 23:51:21] -rwx------. 1 boincer umatlas     36292 Oct 12 15:48 runpilot2-wrapper.sh
[2025-10-12 23:51:21] -rw-r--r--. 1 boincer umatlas       100 Oct 12 22:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:51:21] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 22:41 run_atlas
[2025-10-12 23:51:21] -rw-r--r--. 1 boincer umatlas       105 Oct 12 22:41 job.xml
[2025-10-12 23:51:21] -rw-r--r--. 2 boincer umatlas 221861643 Oct 12 22:41 EVNT.46676267._004472.pool.root.1
[2025-10-12 23:51:21] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 22:41 start_atlas.sh
[2025-10-12 23:51:21] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 22:41 shared
[2025-10-12 23:51:21] -rw-r--r--. 2 boincer umatlas    569684 Oct 12 22:41 input.tar.gz
[2025-10-12 23:51:21] -rw-r--r--. 1 boincer umatlas         0 Oct 12 22:41 boinc_lockfile
[2025-10-12 23:51:21] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 22:41 pandaJob.out
[2025-10-12 23:51:21] -rw-------. 1 boincer umatlas    974373 Oct 12 22:41 agis_schedconf.cvmfs.json
[2025-10-12 23:51:21] -rw-------. 1 boincer umatlas   1560580 Oct 12 22:41 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:51:21] drwx------. 5 boincer umatlas      4096 Oct 12 22:41 pilot3
[2025-10-12 23:51:21] -rw-r--r--. 1 boincer umatlas      6659 Oct 12 23:50 init_data.xml
[2025-10-12 23:51:21] -rw-r--r--. 1 boincer umatlas       529 Oct 12 23:50 boinc_task_state.xml
[2025-10-12 23:51:21] -rw-------. 1 boincer umatlas 201307218 Oct 12 23:50 HITS.46676269._087949.pool.root.1
[2025-10-12 23:51:21] -rw-------. 1 boincer umatlas      1033 Oct 12 23:50 memory_monitor_summary.json
[2025-10-12 23:51:21] -rw-------. 1 boincer umatlas        95 Oct 12 23:50 pilot_heartbeat.json
[2025-10-12 23:51:21] -rw-------. 1 boincer umatlas    328416 Oct 12 23:50 log.46676269._087949.job.log.tgz.1
[2025-10-12 23:51:21] -rw-------. 1 boincer umatlas      7820 Oct 12 23:50 heartbeat.json
[2025-10-12 23:51:21] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 23:51 boinc_mmap_file
[2025-10-12 23:51:21] -rw-r--r--. 1 boincer umatlas        27 Oct 12 23:51 wrapper_checkpoint.txt
[2025-10-12 23:51:21] -rw-------. 1 boincer umatlas       822 Oct 12 23:51 pilotlog.txt
[2025-10-12 23:51:21] -rw-------. 1 boincer umatlas    621909 Oct 12 23:51 log.46676269._087949.job.log.1
[2025-10-12 23:51:21] -rw-------. 1 boincer umatlas       357 Oct 12 23:51 output.list
[2025-10-12 23:51:21] -rw-r--r--. 1 boincer umatlas       620 Oct 12 23:51 runtime_log
[2025-10-12 23:51:21] -rw-------. 1 boincer umatlas    972800 Oct 12 23:51 result.tar.gz
[2025-10-12 23:51:21] -rw-r--r--. 1 boincer umatlas      8703 Oct 12 23:51 runtime_log.err
[2025-10-12 23:51:21] -rw-------. 1 boincer umatlas       650 Oct 12 23:51 iqWKDmtEHS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNLlNDmvVXB2m.diag
[2025-10-12 23:51:21] -rw-r--r--. 1 boincer umatlas     21860 Oct 12 23:51 stderr.txt
[2025-10-12 23:51:21] HITS file was successfully produced:
[2025-10-12 23:51:21] -rw-------. 1 boincer umatlas 201307218 Oct 12 23:50 shared/HITS.pool.root.1
[2025-10-12 23:51:21]  *** Contents of shared directory: ***
[2025-10-12 23:51:21] total 414792
[2025-10-12 23:51:21] -rw-r--r--. 2 boincer umatlas 221861643 Oct 12 22:41 ATLAS.root_0
[2025-10-12 23:51:21] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 22:41 start_atlas.sh
[2025-10-12 23:51:21] -rw-r--r--. 2 boincer umatlas    569684 Oct 12 22:41 input.tar.gz
[2025-10-12 23:51:21] -rw-------. 1 boincer umatlas 201307218 Oct 12 23:50 HITS.pool.root.1
[2025-10-12 23:51:21] -rw-------. 1 boincer umatlas    972800 Oct 12 23:51 result.tar.gz
23:51:22 (2482561): run_atlas exited; CPU time 31283.949005
23:51:22 (2482561): called boinc_finish(0)

</stderr_txt>
]]>

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