Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:51 (195372): wrapper (7.7.26015): starting
00:02:51 (195372): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 00:02:51] Arguments: --nthreads 12
[2025-10-13 00:02:51] Threads: 12
[2025-10-13 00:02:51] Checking for CVMFS
[2025-10-13 00:02:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:02:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:02:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:02:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:02:53] 2.13.2.0 1588368 56980 317308 151647 0 26 22712446 39288833 9757 16776704 0 63648983 99.648 57062177 33467 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 00:02:53] CVMFS is ok
[2025-10-13 00:02:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:02:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:02:53] Further information can be found at the LHC@home message board.
[2025-10-13 00:02:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:02:53] Checking for apptainer binary...
[2025-10-13 00:02:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:02:53] Running /usr/bin/apptainer --version
[2025-10-13 00:02:54] apptainer version 1.4.3-1.el9
[2025-10-13 00:02:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:02:56] c-210-6.aglt2.org
[2025-10-13 00:02:56] apptainer works
[2025-10-13 00:02:56] Set ATHENA_PROC_NUMBER=12
[2025-10-13 00:02:56] Set ATHENA_CORE_NUMBER=12
[2025-10-13 00:02:56] Starting ATLAS job with PandaID=6840538085
[2025-10-13 00:02:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 11:21:02]  *** The last 200 lines of the pilot log: ***
[2025-10-13 11:21:02] 2025-10-13 15:19:53,389 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6840538085/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 11:21:02] 2025-10-13 15:19:53,390 | INFO     | extracted standard info from prmon json
[2025-10-13 11:21:02] 2025-10-13 15:19:53,390 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 11:21:02] 2025-10-13 15:19:53,390 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 11:21:02] 2025-10-13 15:19:53,391 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 11:21:02] 2025-10-13 15:19:53,391 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 11:21:02] 2025-10-13 15:19:53,405 | INFO     | fitting pss+swap vs Time
[2025-10-13 11:21:02] 2025-10-13 15:19:53,406 | INFO     | sum of square deviations: 89536765125.2832
[2025-10-13 11:21:02] 2025-10-13 15:19:53,418 | INFO     | sum of deviations: 291186261677.2622
[2025-10-13 11:21:02] 2025-10-13 15:19:53,419 | INFO     | mean x: 1760348635.6822996
[2025-10-13 11:21:02] 2025-10-13 15:19:53,419 | INFO     | mean y: 2661682.7488653557
[2025-10-13 11:21:02] 2025-10-13 15:19:53,419 | INFO     | -- intersect: -5722241799.7006445
[2025-10-13 11:21:02] 2025-10-13 15:19:53,419 | INFO     | intersect: -5722241799.7006445
[2025-10-13 11:21:02] 2025-10-13 15:19:53,420 | INFO     | chi2: 4.778614517439492
[2025-10-13 11:21:02] 2025-10-13 15:19:53,422 | INFO     | sum of square deviations: 87520412224.03491
[2025-10-13 11:21:02] 2025-10-13 15:19:53,433 | INFO     | sum of deviations: 331155003078.6574
[2025-10-13 11:21:02] 2025-10-13 15:19:53,434 | INFO     | mean x: 1760348483.202744
[2025-10-13 11:21:02] 2025-10-13 15:19:53,434 | INFO     | mean y: 2664684.1905487804
[2025-10-13 11:21:02] 2025-10-13 15:19:53,434 | INFO     | -- intersect: -6658046715.137446
[2025-10-13 11:21:02] 2025-10-13 15:19:53,434 | INFO     | intersect: -6658046715.137446
[2025-10-13 11:21:02] 2025-10-13 15:19:53,435 | INFO     | chi2: 4.091588083023021
[2025-10-13 11:21:02] 2025-10-13 15:19:53,435 | INFO     | current chi2=4.091588083023021 (change=14.377105161112642 %)
[2025-10-13 11:21:02] 2025-10-13 15:19:53,435 | INFO     | right removable region: 655
[2025-10-13 11:21:02] 2025-10-13 15:19:53,437 | INFO     | sum of square deviations: 87519330694.03485
[2025-10-13 11:21:02] 2025-10-13 15:19:53,450 | INFO     | sum of deviations: 69615258174.51071
[2025-10-13 11:21:02] 2025-10-13 15:19:53,451 | INFO     | mean x: 1760348788.202744
[2025-10-13 11:21:02] 2025-10-13 15:19:53,451 | INFO     | mean y: 2678419.6051829266
[2025-10-13 11:21:02] 2025-10-13 15:19:53,451 | INFO     | -- intersect: -1397550928.5412567
[2025-10-13 11:21:02] 2025-10-13 15:19:53,451 | INFO     | intersect: -1397550928.5412567
[2025-10-13 11:21:02] 2025-10-13 15:19:53,452 | INFO     | chi2: 1.14641653434502
[2025-10-13 11:21:02] 2025-10-13 15:19:53,453 | INFO     | current chi2=1.14641653434502 (change=76.0094368323457 %)
[2025-10-13 11:21:02] 2025-10-13 15:19:53,454 | INFO     | sum of square deviations: 85532488501.11816
[2025-10-13 11:21:02] 2025-10-13 15:19:53,467 | INFO     | sum of deviations: 8394531206.569893
[2025-10-13 11:21:02] 2025-10-13 15:19:53,467 | INFO     | mean x: 1760348940.7204301
[2025-10-13 11:21:02] 2025-10-13 15:19:53,467 | INFO     | mean y: 2683117.5360983103
[2025-10-13 11:21:02] 2025-10-13 15:19:53,468 | INFO     | -- intersect: -170085199.81663162
[2025-10-13 11:21:02] 2025-10-13 15:19:53,468 | INFO     | intersect: -170085199.81663162
[2025-10-13 11:21:02] 2025-10-13 15:19:53,469 | INFO     | chi2: 0.8805163202920867
[2025-10-13 11:21:02] 2025-10-13 15:19:53,469 | INFO     | current chi2=0.8805163202920867 (change=23.194031670596033 %)
[2025-10-13 11:21:02] 2025-10-13 15:19:53,469 | INFO     | left removable region: 20
[2025-10-13 11:21:02] 2025-10-13 15:19:53,470 | INFO     | sum of square deviations: 79378164850.57327
[2025-10-13 11:21:02] 2025-10-13 15:19:53,477 | INFO     | monitor loop #2169: job 0:6840538085 is in state 'finished'
[2025-10-13 11:21:02] 2025-10-13 15:19:53,477 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 11:21:02] 2025-10-13 15:19:53,482 | INFO     | sum of deviations: 28572803288.82835
[2025-10-13 11:21:02] 2025-10-13 15:19:53,482 | INFO     | mean x: 1760349062.7811024
[2025-10-13 11:21:02] 2025-10-13 15:19:53,482 | INFO     | mean y: 2687882.5023622047
[2025-10-13 11:21:02] 2025-10-13 15:19:53,482 | INFO     | -- intersect: -630963797.2158862
[2025-10-13 11:21:02] 2025-10-13 15:19:53,482 | INFO     | intersect: -630963797.2158862
[2025-10-13 11:21:02] 2025-10-13 15:19:53,483 | INFO     | chi2: 0.1032241239957744
[2025-10-13 11:21:02] 2025-10-13 15:19:53,484 | INFO     | -- intersect: -630963797.2158862
[2025-10-13 11:21:02] 2025-10-13 15:19:53,484 | INFO     | current memory leak: 0.36 B/s (using 635 data points, chi2=0.10)
[2025-10-13 11:21:02] 2025-10-13 15:19:53,485 | INFO     | could have reported an average CPU frequency of 2586 MHz (25 samples)
[2025-10-13 11:21:02] 2025-10-13 15:19:53,485 | INFO     | ..............................
[2025-10-13 11:21:02] 2025-10-13 15:19:53,486 | INFO     | . Timing measurements:
[2025-10-13 11:21:02] 2025-10-13 15:19:53,486 | INFO     | . get job = 1 s
[2025-10-13 11:21:02] 2025-10-13 15:19:53,486 | INFO     | . initial setup = 14 s
[2025-10-13 11:21:02] 2025-10-13 15:19:53,486 | INFO     | . payload setup = 60 s
[2025-10-13 11:21:02] 2025-10-13 15:19:53,486 | INFO     | . stage-in = 0 s
[2025-10-13 11:21:02] 2025-10-13 15:19:53,486 | INFO     | . payload execution = 40335 s
[2025-10-13 11:21:02] 2025-10-13 15:19:53,486 | INFO     | . stage-out = 2 s
[2025-10-13 11:21:02] 2025-10-13 15:19:53,486 | INFO     | . log creation = 0 s
[2025-10-13 11:21:02] 2025-10-13 15:19:53,486 | INFO     | ..............................
[2025-10-13 11:21:02] 2025-10-13 15:19:53,596 | INFO     | 
[2025-10-13 11:21:02] 2025-10-13 15:19:53,596 | INFO     | job summary report
[2025-10-13 11:21:02] 2025-10-13 15:19:53,597 | INFO     | --------------------------------------------------
[2025-10-13 11:21:02] 2025-10-13 15:19:53,597 | INFO     | PanDA job id: 6840538085
[2025-10-13 11:21:02] 2025-10-13 15:19:53,597 | INFO     | task id: 46676269
[2025-10-13 11:21:02] 2025-10-13 15:19:53,597 | INFO     | errors: (none)
[2025-10-13 11:21:02] 2025-10-13 15:19:53,597 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 11:21:02] 2025-10-13 15:19:53,597 | INFO     | pilot state: finished 
[2025-10-13 11:21:02] 2025-10-13 15:19:53,597 | INFO     | transexitcode: 0
[2025-10-13 11:21:02] 2025-10-13 15:19:53,597 | INFO     | exeerrorcode: 0
[2025-10-13 11:21:02] 2025-10-13 15:19:53,597 | INFO     | exeerrordiag: 
[2025-10-13 11:21:02] 2025-10-13 15:19:53,598 | INFO     | exitcode: 0
[2025-10-13 11:21:02] 2025-10-13 15:19:53,598 | INFO     | exitmsg: OK
[2025-10-13 11:21:02] 2025-10-13 15:19:53,598 | INFO     | cpuconsumptiontime: 56259 s
[2025-10-13 11:21:02] 2025-10-13 15:19:53,598 | INFO     | nevents: 400
[2025-10-13 11:21:02] 2025-10-13 15:19:53,598 | INFO     | neventsw: 0
[2025-10-13 11:21:02] 2025-10-13 15:19:53,598 | INFO     | pid: 208549
[2025-10-13 11:21:02] 2025-10-13 15:19:53,598 | INFO     | pgrp: 208549
[2025-10-13 11:21:02] 2025-10-13 15:19:53,598 | INFO     | corecount: 12
[2025-10-13 11:21:02] 2025-10-13 15:19:53,598 | INFO     | event service: False
[2025-10-13 11:21:02] 2025-10-13 15:19:53,598 | INFO     | sizes: {0: 2348029, 2: 2348630, 3: 2348714, 5: 2348742, 7: 2348969, 8: 2348997, 9: 2349153, 22: 2349181, 33: 2349209, 44: 2349265, 55: 2349349, 56: 2349863, 66: 23
[2025-10-13 11:21:02] 2025-10-13 15:19:53,599 | INFO     | --------------------------------------------------
[2025-10-13 11:21:02] 2025-10-13 15:19:53,599 | INFO     | 
[2025-10-13 11:21:02] 2025-10-13 15:19:53,599 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 11:21:02] 2025-10-13 15:19:53,630 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 11:21:02] 2025-10-13 15:19:53,631 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 11:21:02] 2025-10-13 15:19:53,631 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 11:21:02] 2025-10-13 15:19:53,631 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 11:21:02] 2025-10-13 15:19:53,631 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 11:21:02] 2025-10-13 15:19:53,631 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 11:21:02] 2025-10-13 15:19:53,631 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 11:21:02] 2025-10-13 15:19:53,631 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 11:21:02] 2025-10-13 15:19:53,631 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 11:21:02] 2025-10-13 15:19:53,632 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 11:21:02] 2025-10-13 15:19:53,632 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 11:21:02] 2025-10-13 15:19:53,632 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 11:21:02] 2025-10-13 15:19:53,632 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 11:21:02] 2025-10-13 15:19:53,632 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 11:21:02] 2025-10-13 15:19:53,632 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 11:21:02] 2025-10-13 15:19:53,632 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 11:21:02] 2025-10-13 15:19:53,632 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 11:21:02] 2025-10-13 15:19:53,632 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 11:21:02] 2025-10-13 15:19:53,633 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 11:21:02] 2025-10-13 15:19:53,633 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 11:21:02] 2025-10-13 15:19:53,633 | INFO     | job 6840538085 has completed (purged errors)
[2025-10-13 11:21:02] 2025-10-13 15:19:53,633 | INFO     | overall cleanup function is called
[2025-10-13 11:21:02] 2025-10-13 15:19:54,642 | INFO     | --- collectZombieJob: --- 10, [208549]
[2025-10-13 11:21:02] 2025-10-13 15:19:54,642 | INFO     | zombie collector waiting for pid 208549
[2025-10-13 11:21:02] 2025-10-13 15:19:54,643 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 11:21:02] 2025-10-13 15:19:54,643 | INFO     | collected zombie processes
[2025-10-13 11:21:02] 2025-10-13 15:19:54,643 | INFO     | will attempt to kill all subprocesses of pid=208549
[2025-10-13 11:21:02] 2025-10-13 15:19:54,994 | INFO     | process IDs to be killed: [208549] (in reverse order)
[2025-10-13 11:21:02] 2025-10-13 15:19:55,072 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 11:21:02] 2025-10-13 15:19:55,073 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 11:21:02] 2025-10-13 15:19:55,082 | INFO     | did not find any defunct processes belonging to 208549
[2025-10-13 11:21:02] 2025-10-13 15:19:55,091 | INFO     | did not find any defunct processes belonging to 208549
[2025-10-13 11:21:02] 2025-10-13 15:19:55,092 | INFO     | ready for new job
[2025-10-13 11:21:02] 2025-10-13 15:19:55,092 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 11:21:02] 2025-10-13 15:19:55,096 | INFO     | ***************************************
[2025-10-13 11:21:02] 2025-10-13 15:19:55,097 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 11:21:02] 2025-10-13 15:19:55,097 | INFO     | ***************************************
[2025-10-13 11:21:02] 2025-10-13 15:19:55,097 | INFO     | 
[2025-10-13 11:21:02] 2025-10-13 15:19:55,099 | INFO     | architecture information:
[2025-10-13 11:21:02] 2025-10-13 15:19:55,100 | INFO     | executing command: cat /etc/os-release
[2025-10-13 11:21:02] 2025-10-13 15:19:55,121 | INFO     | cat /etc/os-release:
[2025-10-13 11:21:02] NAME="CentOS Linux"
[2025-10-13 11:21:02] VERSION="7 (Core)"
[2025-10-13 11:21:02] ID="centos"
[2025-10-13 11:21:02] ID_LIKE="rhel fedora"
[2025-10-13 11:21:02] VERSION_ID="7"
[2025-10-13 11:21:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 11:21:02] ANSI_COLOR="0;31"
[2025-10-13 11:21:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 11:21:02] HOME_URL="https://www.centos.org/"
[2025-10-13 11:21:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 11:21:02] 
[2025-10-13 11:21:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 11:21:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 11:21:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 11:21:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 11:21:02] 
[2025-10-13 11:21:02] 2025-10-13 15:19:55,122 | INFO     | ***************************************
[2025-10-13 11:21:02] 2025-10-13 15:19:55,625 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 11:21:02] 2025-10-13 15:19:55,739 | INFO     | sufficient remaining disk space (53616836608 B)
[2025-10-13 11:21:02] 2025-10-13 15:19:55,739 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 11:21:02] 2025-10-13 15:19:55,739 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 11:21:02] 2025-10-13 15:19:55,740 | INFO     | update_server=False
[2025-10-13 11:21:02] 2025-10-13 15:19:55,740 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 11:21:02] 2025-10-13 15:19:55,746 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 11:21:02] 2025-10-13 15:19:55,993 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 11:21:02] 2025-10-13 15:19:55,993 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 11:21:02] 2025-10-13 15:19:55,994 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:21:02] 2025-10-13 15:19:55,994 | INFO     | will abort loop
[2025-10-13 11:21:02] 2025-10-13 15:19:56,555 | INFO     | all data control threads have been joined
[2025-10-13 11:21:02] 2025-10-13 15:19:56,745 | INFO     | [job] retrieve thread has finished
[2025-10-13 11:21:02] 2025-10-13 15:19:56,999 | INFO     | [job] job monitor thread has finished
[2025-10-13 11:21:02] 2025-10-13 15:19:57,101 | INFO     | all job control threads have been joined
[2025-10-13 11:21:02] 2025-10-13 15:19:57,121 | INFO     | all payload control threads have been joined
[2025-10-13 11:21:02] 2025-10-13 15:19:57,462 | INFO     | [payload] failed_post thread has finished
[2025-10-13 11:21:02] 2025-10-13 15:19:57,463 | INFO     | [job] validate thread has finished
[2025-10-13 11:21:02] 2025-10-13 15:19:57,561 | INFO     | [data] control thread has finished
[2025-10-13 11:21:02] 2025-10-13 15:19:57,591 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 11:21:02] 2025-10-13 15:19:57,618 | INFO     | [data] copytool_in thread has finished
[2025-10-13 11:21:02] 2025-10-13 15:19:57,761 | INFO     | [data] copytool_out thread has finished
[2025-10-13 11:21:02] 2025-10-13 15:19:57,778 | INFO     | [payload] validate_post thread has finished
[2025-10-13 11:21:02] 2025-10-13 15:19:57,791 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 11:21:02] 2025-10-13 15:19:57,911 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 11:21:02] 2025-10-13 15:19:58,107 | INFO     | [job] control thread has finished
[2025-10-13 11:21:02] 2025-10-13 15:19:58,127 | INFO     | [payload] control thread has finished
[2025-10-13 11:21:02] 2025-10-13 15:19:58,461 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 11:21:02] 2025-10-13 15:19:58,612 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:21:02] 2025-10-13 15:19:59,618 | INFO     | [job] queue monitor thread has finished
[2025-10-13 11:21:02] 2025-10-13 15:20:02,471 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 11:21:02] 2025-10-13 15:20:05,933 | INFO     | job.realtimelogging is not enabled
[2025-10-13 11:21:02] 2025-10-13 15:20:06,939 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 11:21:02] 2025-10-13 15:20:25,530 | INFO     | PID=199242 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 11:21:02] 2025-10-13 15:20:25,531 | INFO     | .. there are 6 such processes running
[2025-10-13 11:21:02] 2025-10-13 15:20:25,532 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 11:21:02] 2025-10-13 15:20:25,532 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 11:21:02] 2025-10-13 15:20:25,532 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 11:21:02] 2025-10-13 15:20:54,897 | INFO     | [monitor] cgroup control has ended
[2025-10-13 11:21:02] 2025-10-13 15:20:56,421 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140623042488128)>', '<ExcThread(monitor, started 140622178539264)>']
[2025-10-13 11:21:02] 2025-10-13 15:20:56,728 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 11:21:02] 2025-10-13 15:20:56,728 | INFO     | [monitor] control thread has ended
[2025-10-13 11:21:02] 2025-10-13 15:21:01,447 | INFO     | all workflow threads have been joined
[2025-10-13 11:21:02] 2025-10-13 15:21:01,447 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 11:21:02] 2025-10-13 15:21:01,448 | INFO     | traces error code: 0
[2025-10-13 11:21:02] 2025-10-13 15:21:01,448 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 11:21:02] 2025-10-13 15:21:01,683 [wrapper] ==== pilot stdout END ====
[2025-10-13 11:21:02] 2025-10-13 15:21:01,687 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 11:21:02] 2025-10-13 15:21:01,690 [wrapper] pilotpid: 199242
[2025-10-13 11:21:02] 2025-10-13 15:21:01,694 [wrapper] Pilot exit status: 0
[2025-10-13 11:21:02] 2025-10-13 15:21:01,792 [wrapper] pandaids: 6840538085
[2025-10-13 11:21:02] 2025-10-13 15:21:01,844 [wrapper] cleanup supervisor_pilot 1139096 199243
[2025-10-13 11:21:02] 2025-10-13 15:21:01,849 [wrapper] Test setup, not cleaning
[2025-10-13 11:21:02] 2025-10-13 15:21:01,853 [wrapper] apfmon messages muted
[2025-10-13 11:21:02] 2025-10-13 15:21:01,858 [wrapper] ==== wrapper stdout END ====
[2025-10-13 11:21:02] 2025-10-13 15:21:01,863 [wrapper] ==== wrapper stderr END ====
[2025-10-13 11:21:02]  *** Error codes and diagnostics ***
[2025-10-13 11:21:02]     "exeErrorCode": 0,
[2025-10-13 11:21:02]     "exeErrorDiag": "",
[2025-10-13 11:21:02]     "pilotErrorCode": 0,
[2025-10-13 11:21:02]     "pilotErrorDiag": "",
[2025-10-13 11:21:02]  *** Listing of results directory ***
[2025-10-13 11:21:02] total 417060
[2025-10-13 11:21:02] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 14:53 pilot3.tar.gz
[2025-10-13 11:21:02] -rwx------. 1 boincer umatlas     36292 Oct 12 15:06 runpilot2-wrapper.sh
[2025-10-13 11:21:02] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 15:06 queuedata.json
[2025-10-13 11:21:02] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 11:21:02] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:02 run_atlas
[2025-10-13 11:21:02] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:02 job.xml
[2025-10-13 11:21:02] -rw-r--r--. 2 boincer umatlas 219893564 Oct 13 00:02 EVNT.46676267._004438.pool.root.1
[2025-10-13 11:21:02] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:02 start_atlas.sh
[2025-10-13 11:21:02] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:02 shared
[2025-10-13 11:21:02] -rw-r--r--. 2 boincer umatlas    569675 Oct 13 00:02 input.tar.gz
[2025-10-13 11:21:02] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:02 boinc_lockfile
[2025-10-13 11:21:02] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:02 pandaJob.out
[2025-10-13 11:21:02] -rw-------. 1 boincer umatlas    974373 Oct 13 00:04 agis_schedconf.cvmfs.json
[2025-10-13 11:21:02] drwx------. 5 boincer umatlas      4096 Oct 13 00:04 pilot3
[2025-10-13 11:21:02] -rw-------. 1 boincer umatlas 192340592 Oct 13 11:18 HITS.46676269._086957.pool.root.1
[2025-10-13 11:21:02] -rw-r--r--. 1 boincer umatlas      6660 Oct 13 11:19 init_data.xml
[2025-10-13 11:21:02] -rw-r--r--. 1 boincer umatlas       531 Oct 13 11:19 boinc_task_state.xml
[2025-10-13 11:21:02] -rw-------. 1 boincer umatlas      1053 Oct 13 11:19 memory_monitor_summary.json
[2025-10-13 11:21:02] -rw-------. 1 boincer umatlas   1560580 Oct 13 11:19 agis_ddmendpoints.agis.ALL.json
[2025-10-13 11:21:02] -rw-------. 1 boincer umatlas    813300 Oct 13 11:19 log.46676269._086957.job.log.tgz.1
[2025-10-13 11:21:02] -rw-------. 1 boincer umatlas      7849 Oct 13 11:19 heartbeat.json
[2025-10-13 11:21:02] -rw-------. 1 boincer umatlas        95 Oct 13 11:20 pilot_heartbeat.json
[2025-10-13 11:21:02] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 11:20 boinc_mmap_file
[2025-10-13 11:21:02] -rw-r--r--. 1 boincer umatlas        28 Oct 13 11:20 wrapper_checkpoint.txt
[2025-10-13 11:21:02] -rw-------. 1 boincer umatlas      5080 Oct 13 11:21 pilotlog.txt
[2025-10-13 11:21:02] -rw-------. 1 boincer umatlas   4655498 Oct 13 11:21 log.46676269._086957.job.log.1
[2025-10-13 11:21:02] -rw-------. 1 boincer umatlas       357 Oct 13 11:21 output.list
[2025-10-13 11:21:02] -rw-r--r--. 1 boincer umatlas       620 Oct 13 11:21 runtime_log
[2025-10-13 11:21:02] -rw-------. 1 boincer umatlas   5488640 Oct 13 11:21 result.tar.gz
[2025-10-13 11:21:02] -rw-r--r--. 1 boincer umatlas      8701 Oct 13 11:21 runtime_log.err
[2025-10-13 11:21:02] -rw-------. 1 boincer umatlas       661 Oct 13 11:21 5cpLDmCaGS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9DlNDmk6BSVn.diag
[2025-10-13 11:21:02] -rw-r--r--. 1 boincer umatlas     21209 Oct 13 11:21 stderr.txt
[2025-10-13 11:21:02] HITS file was successfully produced:
[2025-10-13 11:21:02] -rw-------. 1 boincer umatlas 192340592 Oct 13 11:18 shared/HITS.pool.root.1
[2025-10-13 11:21:02]  *** Contents of shared directory: ***
[2025-10-13 11:21:02] total 408516
[2025-10-13 11:21:02] -rw-r--r--. 2 boincer umatlas 219893564 Oct 13 00:02 ATLAS.root_0
[2025-10-13 11:21:02] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:02 start_atlas.sh
[2025-10-13 11:21:02] -rw-r--r--. 2 boincer umatlas    569675 Oct 13 00:02 input.tar.gz
[2025-10-13 11:21:02] -rw-------. 1 boincer umatlas 192340592 Oct 13 11:18 HITS.pool.root.1
[2025-10-13 11:21:02] -rw-------. 1 boincer umatlas   5488640 Oct 13 11:21 result.tar.gz
11:21:03 (195372): run_atlas exited; CPU time 57185.246604
11:21:03 (195372): called boinc_finish(0)

</stderr_txt>
]]>

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