Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:54:32 (14336): wrapper (7.7.26015): starting
21:54:32 (14336): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 21:54:32] Arguments: --nthreads 8
[2025-10-12 21:54:32] Threads: 8
[2025-10-12 21:54:32] Checking for CVMFS
[2025-10-12 21:54:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 21:54:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 21:54:32] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 21:54:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 21:54:32] 2.11.2.0 2893 1720 66400 151643 3 57 14998067 20275201 1 130560 0 1194224 99.990 58456 34857 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 21:54:32] CVMFS is ok
[2025-10-12 21:54:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 21:54:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 21:54:32] Further information can be found at the LHC@home message board.
[2025-10-12 21:54:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:54:32] Checking for apptainer binary...
[2025-10-12 21:54:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 21:54:32] Running /usr/bin/apptainer --version
[2025-10-12 21:54:32] apptainer version 1.3.2-1.el7
[2025-10-12 21:54:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:54:34] c-204-22.aglt2.org
[2025-10-12 21:54:34] apptainer works
[2025-10-12 21:54:34] Set ATHENA_PROC_NUMBER=8
[2025-10-12 21:54:34] Set ATHENA_CORE_NUMBER=8
[2025-10-12 21:54:34] Starting ATLAS job with PandaID=6840834703
[2025-10-12 21:54:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:52:09]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:52:09] 2025-10-13 03:51:03,863 | INFO     | intersect: -58112863637.57241
[2025-10-12 23:52:09] 2025-10-13 03:51:03,863 | INFO     | chi2: 1.4142203214827547
[2025-10-12 23:52:09] 2025-10-13 03:51:03,863 | INFO     | current chi2=1.4142203214827547 (change=-0.19103633597317474 %)
[2025-10-12 23:52:09] 2025-10-13 03:51:03,863 | INFO     | right removable region: 108
[2025-10-12 23:52:09] 2025-10-13 03:51:03,864 | INFO     | sum of square deviations: 401533110.0
[2025-10-12 23:52:09] 2025-10-13 03:51:03,864 | INFO     | sum of deviations: -2094079004.0000005
[2025-10-12 23:52:09] 2025-10-13 03:51:03,864 | INFO     | mean x: 1760324122.0
[2025-10-12 23:52:09] 2025-10-13 03:51:03,864 | INFO     | mean y: 2531160.788990826
[2025-10-12 23:52:09] 2025-10-13 03:51:03,864 | INFO     | -- intersect: 9182988991.813026
[2025-10-12 23:52:09] 2025-10-13 03:51:03,865 | INFO     | intersect: 9182988991.813026
[2025-10-12 23:52:09] 2025-10-13 03:51:03,865 | INFO     | chi2: 0.04740301912127242
[2025-10-12 23:52:09] 2025-10-13 03:51:03,865 | INFO     | current chi2=0.04740301912127242 (change=96.64171307746821 %)
[2025-10-12 23:52:09] 2025-10-13 03:51:03,865 | INFO     | sum of square deviations: 348769330.0
[2025-10-12 23:52:09] 2025-10-13 03:51:03,866 | INFO     | sum of deviations: 1383822575.9999998
[2025-10-12 23:52:09] 2025-10-13 03:51:03,866 | INFO     | mean x: 1760324274.5
[2025-10-12 23:52:09] 2025-10-13 03:51:03,866 | INFO     | mean y: 2521071.846153846
[2025-10-12 23:52:09] 2025-10-13 03:51:03,866 | INFO     | -- intersect: -6981970575.208708
[2025-10-12 23:52:09] 2025-10-13 03:51:03,866 | INFO     | intersect: -6981970575.208708
[2025-10-12 23:52:09] 2025-10-13 03:51:03,867 | INFO     | chi2: 0.012557329571779222
[2025-10-12 23:52:09] 2025-10-13 03:51:03,867 | INFO     | current chi2=0.012557329571779222 (change=73.50943082411384 %)
[2025-10-12 23:52:09] 2025-10-13 03:51:03,867 | INFO     | sum of square deviations: 300842850.0
[2025-10-12 23:52:09] 2025-10-13 03:51:03,867 | INFO     | sum of deviations: 1755491428.000001
[2025-10-12 23:52:09] 2025-10-13 03:51:03,868 | INFO     | mean x: 1760324427.0
[2025-10-12 23:52:09] 2025-10-13 03:51:03,868 | INFO     | mean y: 2519999.696969697
[2025-10-12 23:52:09] 2025-10-13 03:51:03,868 | INFO     | -- intersect: -10269402507.67694
[2025-10-12 23:52:09] 2025-10-13 03:51:03,868 | INFO     | intersect: -10269402507.67694
[2025-10-12 23:52:09] 2025-10-13 03:51:03,868 | INFO     | chi2: 0.0004168645708350899
[2025-10-12 23:52:09] 2025-10-13 03:51:03,868 | INFO     | current chi2=0.0004168645708350899 (change=96.68030875153637 %)
[2025-10-12 23:52:09] 2025-10-13 03:51:03,869 | INFO     | sum of square deviations: 257521107.5
[2025-10-12 23:52:09] 2025-10-13 03:51:03,869 | INFO     | sum of deviations: 1315972641.9999998
[2025-10-12 23:52:09] 2025-10-13 03:51:03,869 | INFO     | mean x: 1760324579.5
[2025-10-12 23:52:09] 2025-10-13 03:51:03,869 | INFO     | mean y: 2521544.85106383
[2025-10-12 23:52:09] 2025-10-13 03:51:03,869 | INFO     | -- intersect: -8993008996.901339
[2025-10-12 23:52:09] 2025-10-13 03:51:03,869 | INFO     | intersect: -8993008996.901339
[2025-10-12 23:52:09] 2025-10-13 03:51:03,870 | INFO     | chi2: 0.00026415903384854715
[2025-10-12 23:52:09] 2025-10-13 03:51:03,870 | INFO     | current chi2=0.00026415903384854715 (change=36.631929808914485 %)
[2025-10-12 23:52:09] 2025-10-13 03:51:03,870 | INFO     | sum of square deviations: 218571540.0
[2025-10-12 23:52:09] 2025-10-13 03:51:03,871 | INFO     | sum of deviations: 1004636084.0000001
[2025-10-12 23:52:09] 2025-10-13 03:51:03,871 | INFO     | mean x: 1760324732.0
[2025-10-12 23:52:09] 2025-10-13 03:51:03,871 | INFO     | mean y: 2522765.191011236
[2025-10-12 23:52:09] 2025-10-13 03:51:03,871 | INFO     | -- intersect: -8088584363.05098
[2025-10-12 23:52:09] 2025-10-13 03:51:03,871 | INFO     | intersect: -8088584363.05098
[2025-10-12 23:52:09] 2025-10-13 03:51:03,871 | INFO     | chi2: 0.0002033504411295719
[2025-10-12 23:52:09] 2025-10-13 03:51:03,871 | INFO     | current chi2=0.0002033504411295719 (change=23.01969076470776 %)
[2025-10-12 23:52:09] 2025-10-13 03:51:03,872 | INFO     | left removable region: 50
[2025-10-12 23:52:09] 2025-10-13 03:51:03,872 | INFO     | sum of square deviations: 60482994.5
[2025-10-12 23:52:09] 2025-10-13 03:51:03,872 | INFO     | sum of deviations: 163467190.0
[2025-10-12 23:52:09] 2025-10-13 03:51:03,872 | INFO     | mean x: 1760325311.5
[2025-10-12 23:52:09] 2025-10-13 03:51:03,872 | INFO     | mean y: 2526931.3103448274
[2025-10-12 23:52:09] 2025-10-13 03:51:03,872 | INFO     | -- intersect: -4755098489.447877
[2025-10-12 23:52:09] 2025-10-13 03:51:03,873 | INFO     | intersect: -4755098489.447877
[2025-10-12 23:52:09] 2025-10-13 03:51:03,873 | INFO     | chi2: 5.4125728139913166e-05
[2025-10-12 23:52:09] 2025-10-13 03:51:03,873 | INFO     | -- intersect: -4755098489.447877
[2025-10-12 23:52:09] 2025-10-13 03:51:03,873 | INFO     | current memory leak: 2.70 B/s (using 58 data points, chi2=0.00)
[2025-10-12 23:52:09] 2025-10-13 03:51:03,873 | INFO     | could have reported an average CPU frequency of 1955 MHz (7 samples)
[2025-10-12 23:52:09] 2025-10-13 03:51:03,874 | INFO     | ..............................
[2025-10-12 23:52:09] 2025-10-13 03:51:03,874 | INFO     | . Timing measurements:
[2025-10-12 23:52:09] 2025-10-13 03:51:03,874 | INFO     | . get job = 0 s
[2025-10-12 23:52:09] 2025-10-13 03:51:03,874 | INFO     | . initial setup = 2 s
[2025-10-12 23:52:09] 2025-10-13 03:51:03,874 | INFO     | . payload setup = 8 s
[2025-10-12 23:52:09] 2025-10-13 03:51:03,874 | INFO     | . stage-in = 0 s
[2025-10-12 23:52:09] 2025-10-13 03:51:03,874 | INFO     | . payload execution = 6934 s
[2025-10-12 23:52:09] 2025-10-13 03:51:03,874 | INFO     | . stage-out = 0 s
[2025-10-12 23:52:09] 2025-10-13 03:51:03,874 | INFO     | . log creation = 0 s
[2025-10-12 23:52:09] 2025-10-13 03:51:03,875 | INFO     | ..............................
[2025-10-12 23:52:09] 2025-10-13 03:51:04,135 | INFO     | 
[2025-10-12 23:52:09] 2025-10-13 03:51:04,135 | INFO     | job summary report
[2025-10-12 23:52:09] 2025-10-13 03:51:04,135 | INFO     | --------------------------------------------------
[2025-10-12 23:52:09] 2025-10-13 03:51:04,135 | INFO     | PanDA job id: 6840834703
[2025-10-12 23:52:09] 2025-10-13 03:51:04,135 | INFO     | task id: 46676269
[2025-10-12 23:52:09] 2025-10-13 03:51:04,136 | INFO     | errors: (none)
[2025-10-12 23:52:09] 2025-10-13 03:51:04,136 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:52:09] 2025-10-13 03:51:04,136 | INFO     | pilot state: finished 
[2025-10-12 23:52:09] 2025-10-13 03:51:04,136 | INFO     | transexitcode: 0
[2025-10-12 23:52:09] 2025-10-13 03:51:04,136 | INFO     | exeerrorcode: 0
[2025-10-12 23:52:09] 2025-10-13 03:51:04,136 | INFO     | exeerrordiag: 
[2025-10-12 23:52:09] 2025-10-13 03:51:04,137 | INFO     | exitcode: 0
[2025-10-12 23:52:09] 2025-10-13 03:51:04,137 | INFO     | exitmsg: OK
[2025-10-12 23:52:09] 2025-10-13 03:51:04,137 | INFO     | cpuconsumptiontime: 51600 s
[2025-10-12 23:52:09] 2025-10-13 03:51:04,137 | INFO     | nevents: 400
[2025-10-12 23:52:09] 2025-10-13 03:51:04,137 | INFO     | neventsw: 0
[2025-10-12 23:52:09] 2025-10-13 03:51:04,137 | INFO     | pid: 24547
[2025-10-12 23:52:09] 2025-10-13 03:51:04,138 | INFO     | pgrp: 24547
[2025-10-12 23:52:09] 2025-10-13 03:51:04,138 | INFO     | corecount: 8
[2025-10-12 23:52:09] 2025-10-13 03:51:04,138 | INFO     | event service: False
[2025-10-12 23:52:09] 2025-10-13 03:51:04,138 | INFO     | sizes: {0: 2348857, 1: 2348857, 6: 2349147, 11: 2349175, 6946: 2376369, 6947: 2385367, 6949: 2385551, 6955: 2385745}
[2025-10-12 23:52:09] 2025-10-13 03:51:04,138 | INFO     | --------------------------------------------------
[2025-10-12 23:52:09] 2025-10-13 03:51:04,139 | INFO     | 
[2025-10-12 23:52:09] 2025-10-13 03:51:04,139 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 23:52:09] 2025-10-13 03:51:04,167 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:52:09] 2025-10-13 03:51:04,167 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:52:09] 2025-10-13 03:51:04,167 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:52:09] 2025-10-13 03:51:04,168 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:52:09] 2025-10-13 03:51:04,168 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:52:09] 2025-10-13 03:51:04,168 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:52:09] 2025-10-13 03:51:04,168 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:52:09] 2025-10-13 03:51:04,168 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:52:09] 2025-10-13 03:51:04,168 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:52:09] 2025-10-13 03:51:04,169 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:52:09] 2025-10-13 03:51:04,169 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:52:09] 2025-10-13 03:51:04,169 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:52:09] 2025-10-13 03:51:04,169 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:52:09] 2025-10-13 03:51:04,169 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:52:09] 2025-10-13 03:51:04,170 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:52:09] 2025-10-13 03:51:04,170 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:52:09] 2025-10-13 03:51:04,170 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:52:09] 2025-10-13 03:51:04,170 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:52:09] 2025-10-13 03:51:04,170 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:52:09] 2025-10-13 03:51:04,170 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:52:09] 2025-10-13 03:51:04,171 | INFO     | job 6840834703 has completed (purged errors)
[2025-10-12 23:52:09] 2025-10-13 03:51:04,171 | INFO     | overall cleanup function is called
[2025-10-12 23:52:09] 2025-10-13 03:51:05,179 | INFO     | --- collectZombieJob: --- 10, [24547]
[2025-10-12 23:52:09] 2025-10-13 03:51:05,180 | INFO     | zombie collector waiting for pid 24547
[2025-10-12 23:52:09] 2025-10-13 03:51:05,180 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:52:09] 2025-10-13 03:51:05,180 | INFO     | collected zombie processes
[2025-10-12 23:52:09] 2025-10-13 03:51:05,180 | INFO     | will attempt to kill all subprocesses of pid=24547
[2025-10-12 23:52:09] 2025-10-13 03:51:05,271 | INFO     | process IDs to be killed: [24547] (in reverse order)
[2025-10-12 23:52:09] 2025-10-13 03:51:05,321 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:52:09] 2025-10-13 03:51:05,322 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:52:09] 2025-10-13 03:51:05,325 | INFO     | did not find any defunct processes belonging to 24547
[2025-10-12 23:52:09] 2025-10-13 03:51:05,328 | INFO     | did not find any defunct processes belonging to 24547
[2025-10-12 23:52:09] 2025-10-13 03:51:05,328 | INFO     | ready for new job
[2025-10-12 23:52:09] 2025-10-13 03:51:05,328 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:52:09] 2025-10-13 03:51:05,329 | INFO     | ***************************************
[2025-10-12 23:52:09] 2025-10-13 03:51:05,330 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:52:09] 2025-10-13 03:51:05,330 | INFO     | ***************************************
[2025-10-12 23:52:09] 2025-10-13 03:51:05,330 | INFO     | 
[2025-10-12 23:52:09] 2025-10-13 03:51:05,330 | INFO     | architecture information:
[2025-10-12 23:52:09] 2025-10-13 03:51:05,331 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:52:09] 2025-10-13 03:51:05,349 | INFO     | cat /etc/os-release:
[2025-10-12 23:52:09] NAME="CentOS Linux"
[2025-10-12 23:52:09] VERSION="7 (Core)"
[2025-10-12 23:52:09] ID="centos"
[2025-10-12 23:52:09] ID_LIKE="rhel fedora"
[2025-10-12 23:52:09] VERSION_ID="7"
[2025-10-12 23:52:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:52:09] ANSI_COLOR="0;31"
[2025-10-12 23:52:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:52:09] HOME_URL="https://www.centos.org/"
[2025-10-12 23:52:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:52:09] 
[2025-10-12 23:52:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:52:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:52:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:52:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:52:09] 
[2025-10-12 23:52:09] 2025-10-13 03:51:05,350 | INFO     | ***************************************
[2025-10-12 23:52:09] 2025-10-13 03:51:05,853 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 23:52:09] 2025-10-13 03:51:05,873 | INFO     | sufficient remaining disk space (18555600896 B)
[2025-10-12 23:52:09] 2025-10-13 03:51:05,874 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:52:09] 2025-10-13 03:51:05,874 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:52:09] 2025-10-13 03:51:05,874 | INFO     | update_server=False
[2025-10-12 23:52:09] 2025-10-13 03:51:05,874 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:52:09] 2025-10-13 03:51:05,875 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:52:09] 2025-10-13 03:51:06,078 | INFO     | all payload control threads have been joined
[2025-10-12 23:52:09] 2025-10-13 03:51:06,359 | INFO     | all data control threads have been joined
[2025-10-12 23:52:09] 2025-10-13 03:51:06,467 | INFO     | all job control threads have been joined
[2025-10-12 23:52:09] 2025-10-13 03:51:06,742 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:52:09] 2025-10-13 03:51:06,743 | INFO     | aborting loop
[2025-10-12 23:52:09] 2025-10-13 03:51:06,771 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:52:09] 2025-10-13 03:51:06,880 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:52:09] 2025-10-13 03:51:06,881 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:52:09] 2025-10-13 03:51:07,084 | INFO     | [payload] control thread has finished
[2025-10-12 23:52:09] 2025-10-13 03:51:07,145 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:52:09] 2025-10-13 03:51:07,364 | INFO     | [data] control thread has finished
[2025-10-12 23:52:09] 2025-10-13 03:51:07,378 | INFO     | [job] validate thread has finished
[2025-10-12 23:52:09] 2025-10-13 03:51:07,385 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:52:09] 2025-10-13 03:51:07,388 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:52:09] 2025-10-13 03:51:07,390 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:52:09] 2025-10-13 03:51:07,470 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:52:09] 2025-10-13 03:51:07,473 | INFO     | [job] control thread has finished
[2025-10-12 23:52:09] 2025-10-13 03:51:07,748 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:52:09] 2025-10-13 03:51:08,227 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:52:09] 2025-10-13 03:51:08,666 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:52:09] 2025-10-13 03:51:08,777 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:52:09] 2025-10-13 03:51:12,672 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:52:09] 2025-10-13 03:51:16,302 | INFO     | job.realtimelogging is not enabled
[2025-10-12 23:52:09] 2025-10-13 03:51:17,307 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:52:09] 2025-10-13 03:51:36,143 | INFO     | PID=18012 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 23:52:09] 2025-10-13 03:51:36,144 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:52:09] 2025-10-13 03:51:36,144 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:52:09] 2025-10-13 03:51:36,144 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:52:09] 2025-10-13 03:52:02,633 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:52:09] 2025-10-13 03:52:04,415 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140704165349184)>', '<ExcThread(monitor, started 140703044720384)>']
[2025-10-12 23:52:09] 2025-10-13 03:52:05,281 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:52:09] 2025-10-13 03:52:05,281 | INFO     | [monitor] control thread has ended
[2025-10-12 23:52:09] 2025-10-13 03:52:09,440 | INFO     | all workflow threads have been joined
[2025-10-12 23:52:09] 2025-10-13 03:52:09,441 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:52:09] 2025-10-13 03:52:09,441 | INFO     | traces error code: 0
[2025-10-12 23:52:09] 2025-10-13 03:52:09,441 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:52:09] 2025-10-13 03:52:09,560 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:52:09] 2025-10-13 03:52:09,564 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:52:09] 2025-10-13 03:52:09,569 [wrapper] pilotpid: 18012
[2025-10-12 23:52:09] 2025-10-13 03:52:09,573 [wrapper] Pilot exit status: 0
[2025-10-12 23:52:09] 2025-10-13 03:52:09,591 [wrapper] pandaids: 6840834703
[2025-10-12 23:52:09] 2025-10-13 03:52:09,647 [wrapper] cleanup supervisor_pilot 17136 18013
[2025-10-12 23:52:09] 2025-10-13 03:52:09,652 [wrapper] Test setup, not cleaning
[2025-10-12 23:52:09] 2025-10-13 03:52:09,658 [wrapper] apfmon messages muted
[2025-10-12 23:52:09] 2025-10-13 03:52:09,663 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:52:09] 2025-10-13 03:52:09,668 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:52:09]  *** Error codes and diagnostics ***
[2025-10-12 23:52:09]     "exeErrorCode": 0,
[2025-10-12 23:52:09]     "exeErrorDiag": "",
[2025-10-12 23:52:09]     "pilotErrorCode": 0,
[2025-10-12 23:52:09]     "pilotErrorDiag": "",
[2025-10-12 23:52:09]  *** Listing of results directory ***
[2025-10-12 23:52:09] total 409108
[2025-10-12 23:52:09] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 17:31 pilot3.tar.gz
[2025-10-12 23:52:09] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 17:45 queuedata.json
[2025-10-12 23:52:09] -rwx------ 1 boincer umatlas     36292 Oct 12 17:46 runpilot2-wrapper.sh
[2025-10-12 23:52:09] -rw-r--r-- 1 boincer umatlas       100 Oct 12 21:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:52:09] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 21:54 run_atlas
[2025-10-12 23:52:09] -rw-r--r-- 1 boincer umatlas       105 Oct 12 21:54 job.xml
[2025-10-12 23:52:09] -rw-r--r-- 2 boincer umatlas 223498836 Oct 12 21:54 EVNT.46676267._004840.pool.root.1
[2025-10-12 23:52:09] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 21:54 start_atlas.sh
[2025-10-12 23:52:09] drwxrwx--x 2 boincer umatlas      4096 Oct 12 21:54 shared
[2025-10-12 23:52:09] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 21:54 input.tar.gz
[2025-10-12 23:52:09] -rw-r--r-- 1 boincer umatlas         0 Oct 12 21:54 boinc_lockfile
[2025-10-12 23:52:09] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 21:54 pandaJob.out
[2025-10-12 23:52:09] -rw------- 1 boincer umatlas    975595 Oct 12 21:54 agis_schedconf.cvmfs.json
[2025-10-12 23:52:09] -rw------- 1 boincer umatlas   1560580 Oct 12 21:54 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:52:09] drwx------ 5 boincer umatlas      4096 Oct 12 21:54 pilot3
[2025-10-12 23:52:09] -rw-r--r-- 1 boincer umatlas      5909 Oct 12 23:46 init_data.xml
[2025-10-12 23:52:09] -rw------- 1 boincer umatlas 188817463 Oct 12 23:50 HITS.46676269._090296.pool.root.1
[2025-10-12 23:52:09] -rw-r--r-- 1 boincer umatlas       529 Oct 12 23:50 boinc_task_state.xml
[2025-10-12 23:52:09] -rw------- 1 boincer umatlas      1062 Oct 12 23:50 memory_monitor_summary.json
[2025-10-12 23:52:09] -rw------- 1 boincer umatlas    361258 Oct 12 23:50 log.46676269._090296.job.log.tgz.1
[2025-10-12 23:52:09] -rw------- 1 boincer umatlas      7846 Oct 12 23:51 heartbeat.json
[2025-10-12 23:52:09] -rw------- 1 boincer umatlas        95 Oct 12 23:51 pilot_heartbeat.json
[2025-10-12 23:52:09] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 23:51 boinc_mmap_file
[2025-10-12 23:52:09] -rw-r--r-- 1 boincer umatlas        27 Oct 12 23:51 wrapper_checkpoint.txt
[2025-10-12 23:52:09] -rw------- 1 boincer umatlas      4818 Oct 12 23:52 pilotlog.txt
[2025-10-12 23:52:09] -rw------- 1 boincer umatlas    987477 Oct 12 23:52 log.46676269._090296.job.log.1
[2025-10-12 23:52:09] -rw------- 1 boincer umatlas       357 Oct 12 23:52 output.list
[2025-10-12 23:52:09] -rw-r--r-- 1 boincer umatlas       620 Oct 12 23:52 runtime_log
[2025-10-12 23:52:09] -rw------- 1 boincer umatlas   1372160 Oct 12 23:52 result.tar.gz
[2025-10-12 23:52:09] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 23:52 runtime_log.err
[2025-10-12 23:52:09] -rw------- 1 boincer umatlas       659 Oct 12 23:52 r6mNDmU4IS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBklNDmLIWM8m.diag
[2025-10-12 23:52:09] -rw-r--r-- 1 boincer umatlas     20907 Oct 12 23:52 stderr.txt
[2025-10-12 23:52:09] HITS file was successfully produced:
[2025-10-12 23:52:09] -rw------- 1 boincer umatlas 188817463 Oct 12 23:50 shared/HITS.pool.root.1
[2025-10-12 23:52:09]  *** Contents of shared directory: ***
[2025-10-12 23:52:09] total 404580
[2025-10-12 23:52:09] -rw-r--r-- 2 boincer umatlas 223498836 Oct 12 21:54 ATLAS.root_0
[2025-10-12 23:52:09] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 21:54 start_atlas.sh
[2025-10-12 23:52:09] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 21:54 input.tar.gz
[2025-10-12 23:52:09] -rw------- 1 boincer umatlas 188817463 Oct 12 23:50 HITS.pool.root.1
[2025-10-12 23:52:09] -rw------- 1 boincer umatlas   1372160 Oct 12 23:52 result.tar.gz
23:52:11 (14336): run_atlas exited; CPU time 51615.523878
23:52:11 (14336): called boinc_finish(0)

</stderr_txt>
]]>

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