Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
22:03:46 (2605921): wrapper (7.7.26015): starting
22:03:46 (2605921): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 22:03:46] Arguments: --nthreads 8
[2025-10-12 22:03:46] Threads: 8
[2025-10-12 22:03:46] Checking for CVMFS
[2025-10-12 22:03:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 22:03:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 22:03:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 22:03:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 22:03:46] 2.12.7.0 3856927 6312 72844 151647 1 188 2530755 4096001 923 130560 0 19557280 99.997 216914 600 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 22:03:46] CVMFS is ok
[2025-10-12 22:03:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 22:03:46] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 22:03:46] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 22:03:46] Further information can be found at the LHC@home message board.
[2025-10-12 22:03:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 22:03:46] Checking for apptainer binary...
[2025-10-12 22:03:46] apptainer is not installed, using version from CVMFS
[2025-10-12 22:03:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 22:03:46] painter
[2025-10-12 22:03:46] apptainer works
[2025-10-12 22:03:46] Set ATHENA_PROC_NUMBER=8
[2025-10-12 22:03:46] Set ATHENA_CORE_NUMBER=8
[2025-10-12 22:03:46] Starting ATLAS job with PandaID=6840532023
[2025-10-12 22:03:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:42:18]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:42:18] ]
[2025-10-12 22:42:18] 2025-10-13 04:41:34,971 | INFO     | transferring file log.46676269._086044.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-6840532023/log.46676269._086044.job.log.tgz.1 to /var/lib/boinc
[2025-10-12 22:42:18] 2025-10-13 04:41:34,971 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6840532023/log.46676269._086044.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.466762
[2025-10-12 22:42:18] 2025-10-13 04:41:34,988 | INFO     | adding to output.list: log.46676269._086044.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a0/ec/log.46676269._086044.job.log.tg
[2025-10-12 22:42:18] 2025-10-13 04:41:34,989 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 22:42:18] 2025-10-13 04:41:34,989 | INFO     | summary of transferred files:
[2025-10-12 22:42:18] 2025-10-13 04:41:34,989 | INFO     |  -- lfn=log.46676269._086044.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 22:42:18] 2025-10-13 04:41:34,989 | INFO     | stage-out finished correctly
[2025-10-12 22:42:18] 2025-10-13 04:41:35,239 | INFO     | time since job start (2260s) is within the limit (172800.0s)
[2025-10-12 22:42:18] 2025-10-13 04:41:35,573 | INFO     | monitor loop #176: job 0:6840532023 is in state 'finished'
[2025-10-12 22:42:18] 2025-10-13 04:41:35,573 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:42:18] 2025-10-13 04:41:37,244 | INFO     | time since job start (2262s) is within the limit (172800.0s)
[2025-10-12 22:42:18] 2025-10-13 04:41:37,960 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 22:42:18] 2025-10-13 04:41:38,075 | INFO     | monitor loop #177: job 0:6840532023 is in state 'finished'
[2025-10-12 22:42:18] 2025-10-13 04:41:38,075 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:42:18] 2025-10-13 04:41:39,249 | INFO     | time since job start (2264s) is within the limit (172800.0s)
[2025-10-12 22:42:18] 2025-10-13 04:41:40,578 | INFO     | monitor loop #178: job 0:6840532023 is in state 'finished'
[2025-10-12 22:42:18] 2025-10-13 04:41:40,578 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:42:18] 2025-10-13 04:41:40,797 | INFO     | job 6840532023 has state=finished
[2025-10-12 22:42:18] 2025-10-13 04:41:40,797 | INFO     | preparing for final server update for job 6840532023 in state='finished'
[2025-10-12 22:42:18] 2025-10-13 04:41:40,798 | INFO     | this job has now completed (state=finished)
[2025-10-12 22:42:18] 2025-10-13 04:41:40,798 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 22:42:18] 2025-10-13 04:41:40,798 | INFO     | log transfer has been attempted: DONE
[2025-10-12 22:42:18] 2025-10-13 04:41:40,798 | INFO     | job 6840532023 has finished - writing final server update
[2025-10-12 22:42:18] 2025-10-13 04:41:40,798 | INFO     | total number of processed events: 400 (read)
[2025-10-12 22:42:18] 2025-10-13 04:41:40,803 | INFO     | executing command: lscpu
[2025-10-12 22:42:18] 2025-10-13 04:41:40,839 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 22:42:18] 2025-10-13 04:41:41,254 | INFO     | time since job start (2266s) is within the limit (172800.0s)
[2025-10-12 22:42:18] 2025-10-13 04:41:43,081 | INFO     | monitor loop #179: job 0:6840532023 is in state 'finished'
[2025-10-12 22:42:18] 2025-10-13 04:41:43,081 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:42:18] 2025-10-13 04:41:43,259 | INFO     | time since job start (2268s) is within the limit (172800.0s)
[2025-10-12 22:42:18] 2025-10-13 04:41:45,264 | INFO     | time since job start (2270s) is within the limit (172800.0s)
[2025-10-12 22:42:18] 2025-10-13 04:41:45,584 | INFO     | monitor loop #180: job 0:6840532023 is in state 'finished'
[2025-10-12 22:42:18] 2025-10-13 04:41:45,584 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:42:18] 2025-10-13 04:41:45,964 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 22:42:18] 2025-10-13 04:41:45,966 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4250.67584375
[2025-10-12 22:42:18] 2025-10-13 04:41:45,968 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6840532023/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 22:42:18] 2025-10-13 04:41:45,968 | INFO     | extracted standard info from prmon json
[2025-10-12 22:42:18] 2025-10-13 04:41:45,968 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 22:42:18] 2025-10-13 04:41:45,968 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 22:42:18] 2025-10-13 04:41:45,968 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 22:42:18] 2025-10-13 04:41:45,968 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:42:18] 2025-10-13 04:41:45,968 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:42:18] 2025-10-13 04:41:45,968 | INFO     | sum of square deviations: 8362947.5
[2025-10-12 22:42:18] 2025-10-13 04:41:45,969 | INFO     | sum of deviations: 188915505.5
[2025-10-12 22:42:18] 2025-10-13 04:41:45,969 | INFO     | mean x: 1760329443.5
[2025-10-12 22:42:18] 2025-10-13 04:41:45,969 | INFO     | mean y: 2513919.566666667
[2025-10-12 22:42:18] 2025-10-13 04:41:45,969 | INFO     | -- intersect: -39762596009.1201
[2025-10-12 22:42:18] 2025-10-13 04:41:45,969 | INFO     | intersect: -39762596009.1201
[2025-10-12 22:42:18] 2025-10-13 04:41:45,969 | INFO     | chi2: 5.656559333829894e-05
[2025-10-12 22:42:18] 2025-10-13 04:41:45,969 | INFO     | -- intersect: -39762596009.1201
[2025-10-12 22:42:18] 2025-10-13 04:41:45,969 | INFO     | current memory leak: 22.59 B/s (using 30 data points, chi2=0.00)
[2025-10-12 22:42:18] 2025-10-13 04:41:45,969 | INFO     | could have reported an average CPU frequency of 4247 MHz (5 samples)
[2025-10-12 22:42:18] 2025-10-13 04:41:45,969 | INFO     | ..............................
[2025-10-12 22:42:18] 2025-10-13 04:41:45,969 | INFO     | . Timing measurements:
[2025-10-12 22:42:18] 2025-10-13 04:41:45,969 | INFO     | . get job = 0 s
[2025-10-12 22:42:18] 2025-10-13 04:41:45,969 | INFO     | . initial setup = 3 s
[2025-10-12 22:42:18] 2025-10-13 04:41:45,969 | INFO     | . payload setup = 3 s
[2025-10-12 22:42:18] 2025-10-13 04:41:45,969 | INFO     | . stage-in = 0 s
[2025-10-12 22:42:18] 2025-10-13 04:41:45,969 | INFO     | . payload execution = 2240 s
[2025-10-12 22:42:18] 2025-10-13 04:41:45,969 | INFO     | . stage-out = 0 s
[2025-10-12 22:42:18] 2025-10-13 04:41:45,969 | INFO     | . log creation = 0 s
[2025-10-12 22:42:18] 2025-10-13 04:41:45,969 | INFO     | ..............................
[2025-10-12 22:42:18] 2025-10-13 04:41:45,996 | INFO     | 
[2025-10-12 22:42:18] 2025-10-13 04:41:45,996 | INFO     | job summary report
[2025-10-12 22:42:18] 2025-10-13 04:41:45,996 | INFO     | --------------------------------------------------
[2025-10-12 22:42:18] 2025-10-13 04:41:45,996 | INFO     | PanDA job id: 6840532023
[2025-10-12 22:42:18] 2025-10-13 04:41:45,996 | INFO     | task id: 46676269
[2025-10-12 22:42:18] 2025-10-13 04:41:45,996 | INFO     | errors: (none)
[2025-10-12 22:42:18] 2025-10-13 04:41:45,996 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:42:18] 2025-10-13 04:41:45,996 | INFO     | pilot state: finished 
[2025-10-12 22:42:18] 2025-10-13 04:41:45,996 | INFO     | transexitcode: 0
[2025-10-12 22:42:18] 2025-10-13 04:41:45,996 | INFO     | exeerrorcode: 0
[2025-10-12 22:42:18] 2025-10-13 04:41:45,996 | INFO     | exeerrordiag: 
[2025-10-12 22:42:18] 2025-10-13 04:41:45,996 | INFO     | exitcode: 0
[2025-10-12 22:42:18] 2025-10-13 04:41:45,996 | INFO     | exitmsg: OK
[2025-10-12 22:42:18] 2025-10-13 04:41:45,996 | INFO     | cpuconsumptiontime: 16621 s
[2025-10-12 22:42:18] 2025-10-13 04:41:45,996 | INFO     | nevents: 400
[2025-10-12 22:42:18] 2025-10-13 04:41:45,996 | INFO     | neventsw: 0
[2025-10-12 22:42:18] 2025-10-13 04:41:45,996 | INFO     | pid: 2617395
[2025-10-12 22:42:18] 2025-10-13 04:41:45,996 | INFO     | pgrp: 2617395
[2025-10-12 22:42:18] 2025-10-13 04:41:45,996 | INFO     | corecount: 8
[2025-10-12 22:42:18] 2025-10-13 04:41:45,996 | INFO     | event service: False
[2025-10-12 22:42:18] 2025-10-13 04:41:45,996 | INFO     | sizes: {0: 2348864, 3: 2349126, 11: 2349154, 2246: 2374289, 2247: 2383301, 2250: 2383357, 2258: 2383711}
[2025-10-12 22:42:18] 2025-10-13 04:41:45,996 | INFO     | --------------------------------------------------
[2025-10-12 22:42:18] 2025-10-13 04:41:45,996 | INFO     | 
[2025-10-12 22:42:18] 2025-10-13 04:41:45,996 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-10-12 22:42:18] 2025-10-13 04:41:46,011 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:42:18] 2025-10-13 04:41:46,011 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:42:18] 2025-10-13 04:41:46,011 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:42:18] 2025-10-13 04:41:46,011 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:42:18] 2025-10-13 04:41:46,011 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:42:18] 2025-10-13 04:41:46,011 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:42:18] 2025-10-13 04:41:46,011 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:42:18] 2025-10-13 04:41:46,011 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:42:18] 2025-10-13 04:41:46,011 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:42:18] 2025-10-13 04:41:46,011 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:42:18] 2025-10-13 04:41:46,011 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:42:18] 2025-10-13 04:41:46,011 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:42:18] 2025-10-13 04:41:46,011 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:42:18] 2025-10-13 04:41:46,011 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:42:18] 2025-10-13 04:41:46,012 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:42:18] 2025-10-13 04:41:46,012 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:42:18] 2025-10-13 04:41:46,012 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:42:18] 2025-10-13 04:41:46,012 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:42:18] 2025-10-13 04:41:46,012 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:42:18] 2025-10-13 04:41:46,012 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:42:18] 2025-10-13 04:41:46,012 | INFO     | job 6840532023 has completed (purged errors)
[2025-10-12 22:42:18] 2025-10-13 04:41:46,012 | INFO     | overall cleanup function is called
[2025-10-12 22:42:18] 2025-10-13 04:41:47,018 | INFO     | --- collectZombieJob: --- 10, [2617395]
[2025-10-12 22:42:18] 2025-10-13 04:41:47,018 | INFO     | zombie collector waiting for pid 2617395
[2025-10-12 22:42:18] 2025-10-13 04:41:47,018 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:42:18] 2025-10-13 04:41:47,018 | INFO     | collected zombie processes
[2025-10-12 22:42:18] 2025-10-13 04:41:47,018 | INFO     | will attempt to kill all subprocesses of pid=2617395
[2025-10-12 22:42:18] 2025-10-13 04:41:47,069 | INFO     | process IDs to be killed: [2617395] (in reverse order)
[2025-10-12 22:42:18] 2025-10-13 04:41:47,106 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:42:18] 2025-10-13 04:41:47,106 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:42:18] 2025-10-13 04:41:47,109 | INFO     | did not find any defunct processes belonging to 2617395
[2025-10-12 22:42:18] 2025-10-13 04:41:47,111 | INFO     | did not find any defunct processes belonging to 2617395
[2025-10-12 22:42:18] 2025-10-13 04:41:47,111 | INFO     | ready for new job
[2025-10-12 22:42:18] 2025-10-13 04:41:47,111 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:42:18] 2025-10-13 04:41:47,112 | INFO     | ***************************************
[2025-10-12 22:42:18] 2025-10-13 04:41:47,112 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:42:18] 2025-10-13 04:41:47,112 | INFO     | ***************************************
[2025-10-12 22:42:18] 2025-10-13 04:41:47,112 | INFO     | 
[2025-10-12 22:42:18] 2025-10-13 04:41:47,113 | INFO     | architecture information:
[2025-10-12 22:42:18] 2025-10-13 04:41:47,113 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:42:18] 2025-10-13 04:41:47,122 | INFO     | cat /etc/os-release:
[2025-10-12 22:42:18] NAME="CentOS Linux"
[2025-10-12 22:42:18] VERSION="7 (Core)"
[2025-10-12 22:42:18] ID="centos"
[2025-10-12 22:42:18] ID_LIKE="rhel fedora"
[2025-10-12 22:42:18] VERSION_ID="7"
[2025-10-12 22:42:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:42:18] ANSI_COLOR="0;31"
[2025-10-12 22:42:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:42:18] HOME_URL="https://www.centos.org/"
[2025-10-12 22:42:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:42:18] 
[2025-10-12 22:42:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:42:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:42:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:42:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:42:18] 
[2025-10-12 22:42:18] 2025-10-13 04:41:47,122 | INFO     | ***************************************
[2025-10-12 22:42:18] 2025-10-13 04:41:47,625 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-10-12 22:42:18] 2025-10-13 04:41:47,647 | INFO     | sufficient remaining disk space (190377361408 B)
[2025-10-12 22:42:18] 2025-10-13 04:41:47,648 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:42:18] 2025-10-13 04:41:47,648 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:42:18] 2025-10-13 04:41:47,648 | INFO     | update_server=False
[2025-10-12 22:42:18] 2025-10-13 04:41:47,648 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:42:18] 2025-10-13 04:41:47,648 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:42:18] 2025-10-13 04:41:48,041 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:42:18] 2025-10-13 04:41:48,087 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 22:42:18] 2025-10-13 04:41:48,087 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 22:42:18] 2025-10-13 04:41:48,087 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:42:18] 2025-10-13 04:41:48,087 | INFO     | will abort loop
[2025-10-12 22:42:18] 2025-10-13 04:41:48,208 | INFO     | all data control threads have been joined
[2025-10-12 22:42:18] 2025-10-13 04:41:48,509 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:42:18] 2025-10-13 04:41:48,653 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:42:18] 2025-10-13 04:41:48,653 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:42:18] 2025-10-13 04:41:48,694 | INFO     | all job control threads have been joined
[2025-10-12 22:42:18] 2025-10-13 04:41:48,756 | INFO     | all payload control threads have been joined
[2025-10-12 22:42:18] 2025-10-13 04:41:48,996 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:42:18] 2025-10-13 04:41:49,092 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:42:18] 2025-10-13 04:41:49,101 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:42:18] 2025-10-13 04:41:49,145 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:42:18] 2025-10-13 04:41:49,213 | INFO     | [data] control thread has finished
[2025-10-12 22:42:18] 2025-10-13 04:41:49,338 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:42:18] 2025-10-13 04:41:49,640 | INFO     | [job] validate thread has finished
[2025-10-12 22:42:18] 2025-10-13 04:41:49,685 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:42:18] 2025-10-13 04:41:49,699 | INFO     | [job] control thread has finished
[2025-10-12 22:42:18] 2025-10-13 04:41:49,746 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:42:18] 2025-10-13 04:41:49,761 | INFO     | [payload] control thread has finished
[2025-10-12 22:42:18] 2025-10-13 04:41:50,046 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:42:18] 2025-10-13 04:41:50,049 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:42:18] 2025-10-13 04:41:52,515 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:42:18] 2025-10-13 04:41:58,625 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:42:18] 2025-10-13 04:41:59,716 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124851809584960)>', '<ExcThread(monitor, started 124851377407744)>']
[2025-10-12 22:42:18] 2025-10-13 04:42:04,741 | INFO     | all workflow threads have been joined
[2025-10-12 22:42:18] 2025-10-13 04:42:04,741 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:42:18] 2025-10-13 04:42:04,741 | INFO     | traces error code: 0
[2025-10-12 22:42:18] 2025-10-13 04:42:04,742 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:42:18] 2025-10-13 04:42:18,405 | INFO     | PID=2609774 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 22:42:18] 2025-10-13 04:42:18,405 | INFO     | .. there are 2 such processes running
[2025-10-12 22:42:18] 2025-10-13 04:42:18,405 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:42:18] 2025-10-13 04:42:18,405 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:42:18] 2025-10-13 04:42:18,405 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:42:18] 2025-10-13 04:42:18,405 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:42:18] 2025-10-13 04:42:18,405 | INFO     | [monitor] control thread has ended
[2025-10-12 22:42:18] 2025-10-13 04:42:18,464 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:42:18] 2025-10-13 04:42:18,467 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:42:18] 2025-10-13 04:42:18,469 [wrapper] pilotpid: 2609774
[2025-10-12 22:42:18] 2025-10-13 04:42:18,470 [wrapper] Pilot exit status: 0
[2025-10-12 22:42:18] 2025-10-13 04:42:18,480 [wrapper] pandaids: 6840532023
[2025-10-12 22:42:18] 2025-10-13 04:42:18,500 [wrapper] cleanup supervisor_pilot 2642940 2609775
[2025-10-12 22:42:18] 2025-10-13 04:42:18,501 [wrapper] Test setup, not cleaning
[2025-10-12 22:42:18] 2025-10-13 04:42:18,503 [wrapper] apfmon messages muted
[2025-10-12 22:42:18] 2025-10-13 04:42:18,504 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:42:18] 2025-10-13 04:42:18,508 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:42:18]  *** Error codes and diagnostics ***
[2025-10-12 22:42:18]     "exeErrorCode": 0,
[2025-10-12 22:42:18]     "exeErrorDiag": "",
[2025-10-12 22:42:18]     "pilotErrorCode": 0,
[2025-10-12 22:42:18]     "pilotErrorDiag": "",
[2025-10-12 22:42:18]  *** Listing of results directory ***
[2025-10-12 22:42:18] total 413196
[2025-10-12 22:42:18] -rw-r--r-- 1 boinc boinc    557409 Oct 12 12:20 pilot3.tar.gz
[2025-10-12 22:42:18] -rw-r--r-- 1 boinc boinc      5112 Oct 12 12:22 queuedata.json
[2025-10-12 22:42:18] -rwx------ 1 boinc boinc     36292 Oct 12 12:22 runpilot2-wrapper.sh
[2025-10-12 22:42:18] -rw-r--r-- 1 boinc boinc       100 Oct 12 22:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:42:18] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 22:03 run_atlas
[2025-10-12 22:42:18] -rw-r--r-- 1 boinc boinc       105 Oct 12 22:03 job.xml
[2025-10-12 22:42:18] -rw-r--r-- 2 boinc boinc 219576524 Oct 12 22:03 EVNT.46676267._004401.pool.root.1
[2025-10-12 22:42:18] -rw-r--r-- 2 boinc boinc     15120 Oct 12 22:03 start_atlas.sh
[2025-10-12 22:42:18] drwxrwx--x 2 boinc boinc      4096 Oct 12 22:03 shared
[2025-10-12 22:42:18] -rw-r--r-- 2 boinc boinc    569678 Oct 12 22:03 input.tar.gz
[2025-10-12 22:42:18] -rw-r--r-- 1 boinc boinc      9979 Oct 12 22:03 init_data.xml
[2025-10-12 22:42:18] -rw-r--r-- 1 boinc boinc         0 Oct 12 22:03 boinc_lockfile
[2025-10-12 22:42:18] -rw-r--r-- 1 boinc boinc      2550 Oct 12 22:03 pandaJob.out
[2025-10-12 22:42:18] -rw------- 1 boinc boinc    974373 Oct 12 22:03 agis_schedconf.cvmfs.json
[2025-10-12 22:42:18] -rw------- 1 boinc boinc   1560580 Oct 12 22:03 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:42:18] drwx------ 5 boinc boinc      4096 Oct 12 22:03 pilot3
[2025-10-12 22:42:18] -rw-r--r-- 1 boinc boinc       529 Oct 12 22:41 boinc_task_state.xml
[2025-10-12 22:42:18] -rw------- 1 boinc boinc 198287272 Oct 12 22:41 HITS.46676269._086044.pool.root.1
[2025-10-12 22:42:18] -rw------- 1 boinc boinc      1021 Oct 12 22:41 memory_monitor_summary.json
[2025-10-12 22:42:18] -rw------- 1 boinc boinc    304491 Oct 12 22:41 log.46676269._086044.job.log.tgz.1
[2025-10-12 22:42:18] -rw------- 1 boinc boinc      7734 Oct 12 22:41 heartbeat.json
[2025-10-12 22:42:18] -rw-r--r-- 1 boinc boinc      8192 Oct 12 22:42 boinc_mmap_file
[2025-10-12 22:42:18] -rw-r--r-- 1 boinc boinc        27 Oct 12 22:42 wrapper_checkpoint.txt
[2025-10-12 22:42:18] -rw------- 1 boinc boinc       822 Oct 12 22:42 pilotlog.txt
[2025-10-12 22:42:18] -rw------- 1 boinc boinc        95 Oct 12 22:42 pilot_heartbeat.json
[2025-10-12 22:42:18] -rw------- 1 boinc boinc    371860 Oct 12 22:42 log.46676269._086044.job.log.1
[2025-10-12 22:42:18] -rw------- 1 boinc boinc       357 Oct 12 22:42 output.list
[2025-10-12 22:42:18] -rw-r--r-- 1 boinc boinc       620 Oct 12 22:42 runtime_log
[2025-10-12 22:42:18] -rw------- 1 boinc boinc    696320 Oct 12 22:42 result.tar.gz
[2025-10-12 22:42:18] -rw------- 1 boinc boinc       654 Oct 12 22:42 SZmLDmStFS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDma2kNDmWH1FPn.diag
[2025-10-12 22:42:18] -rw-r--r-- 1 boinc boinc      8794 Oct 12 22:42 runtime_log.err
[2025-10-12 22:42:18] -rw-r--r-- 1 boinc boinc     22205 Oct 12 22:42 stderr.txt
[2025-10-12 22:42:18] HITS file was successfully produced:
[2025-10-12 22:42:18] -rw------- 1 boinc boinc 198287272 Oct 12 22:41 shared/HITS.pool.root.1
[2025-10-12 22:42:18]  *** Contents of shared directory: ***
[2025-10-12 22:42:18] total 409332
[2025-10-12 22:42:18] -rw-r--r-- 2 boinc boinc 219576524 Oct 12 22:03 ATLAS.root_0
[2025-10-12 22:42:18] -rw-r--r-- 2 boinc boinc     15120 Oct 12 22:03 start_atlas.sh
[2025-10-12 22:42:18] -rw-r--r-- 2 boinc boinc    569678 Oct 12 22:03 input.tar.gz
[2025-10-12 22:42:18] -rw------- 1 boinc boinc 198287272 Oct 12 22:41 HITS.pool.root.1
[2025-10-12 22:42:18] -rw------- 1 boinc boinc    696320 Oct 12 22:42 result.tar.gz
22:42:20 (2605921): run_atlas exited; CPU time 16625.126904
22:42:20 (2605921): called boinc_finish(0)

</stderr_txt>
]]>

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