Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:11 (172119): wrapper (7.7.26015): starting
00:01:11 (172119): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 00:01:11] Arguments: --nthreads 8
[2025-10-13 00:01:11] Threads: 8
[2025-10-13 00:01:11] Checking for CVMFS
[2025-10-13 00:01:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:01:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:01:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:01:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:01:13] 2.13.2.0 5319 43924 304716 151647 0 26 19631429 32935936 18507 16776704 0 94893263 99.536 116766483 31408 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:01:13] CVMFS is ok
[2025-10-13 00:01:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:01:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:01:14] Further information can be found at the LHC@home message board.
[2025-10-13 00:01:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:01:14] Checking for apptainer binary...
[2025-10-13 00:01:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:01:14] Running /usr/bin/apptainer --version
[2025-10-13 00:01:14] apptainer version 1.4.3-1.el9
[2025-10-13 00:01:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:01:14] c6-1-24-2.aglt2.org
[2025-10-13 00:01:14] apptainer works
[2025-10-13 00:01:15] Set ATHENA_PROC_NUMBER=8
[2025-10-13 00:01:15] Set ATHENA_CORE_NUMBER=8
[2025-10-13 00:01:15] Starting ATLAS job with PandaID=6840750710
[2025-10-13 00:01:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:15:33]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:15:33] 2025-10-13 12:14:44,122 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 08:15:33] 2025-10-13 12:14:44,122 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 08:15:33] 2025-10-13 12:14:44,206 | INFO     | fitting pss+swap vs Time
[2025-10-13 08:15:33] 2025-10-13 12:14:44,207 | INFO     | sum of square deviations: 34506310585.97499
[2025-10-13 08:15:33] 2025-10-13 12:14:44,224 | INFO     | sum of deviations: 201104898307.74405
[2025-10-13 08:15:33] 2025-10-13 12:14:44,224 | INFO     | mean x: 1760342934.9085238
[2025-10-13 08:15:33] 2025-10-13 12:14:44,224 | INFO     | mean y: 2061237.0623700623
[2025-10-13 08:15:33] 2025-10-13 12:14:44,225 | INFO     | -- intersect: -10257325550.449545
[2025-10-13 08:15:33] 2025-10-13 12:14:44,225 | INFO     | intersect: -10257325550.449545
[2025-10-13 08:15:33] 2025-10-13 12:14:44,262 | INFO     | chi2: 4.202277837181286
[2025-10-13 08:15:33] 2025-10-13 12:14:44,263 | INFO     | sum of square deviations: 33441445843.638557
[2025-10-13 08:15:33] 2025-10-13 12:14:44,295 | INFO     | sum of deviations: 229474725205.3741
[2025-10-13 08:15:33] 2025-10-13 12:14:44,295 | INFO     | mean x: 1760342782.4159663
[2025-10-13 08:15:33] 2025-10-13 12:14:44,295 | INFO     | mean y: 2065271.8718487395
[2025-10-13 08:15:33] 2025-10-13 12:14:44,295 | INFO     | -- intersect: -12077381835.496872
[2025-10-13 08:15:33] 2025-10-13 12:14:44,295 | INFO     | intersect: -12077381835.496872
[2025-10-13 08:15:33] 2025-10-13 12:14:44,296 | INFO     | chi2: 3.5176411234914218
[2025-10-13 08:15:33] 2025-10-13 12:14:44,296 | INFO     | current chi2=3.5176411234914218 (change=16.292038275819714 %)
[2025-10-13 08:15:33] 2025-10-13 12:14:44,296 | INFO     | right removable region: 475
[2025-10-13 08:15:33] 2025-10-13 12:14:44,322 | INFO     | sum of square deviations: 33441208491.80459
[2025-10-13 08:15:33] 2025-10-13 12:14:44,321 | INFO     | time since job start (29537s) is within the limit (172800.0s)
[2025-10-13 08:15:33] 2025-10-13 12:14:44,363 | INFO     | sum of deviations: 101767273389.02731
[2025-10-13 08:15:33] 2025-10-13 12:14:44,364 | INFO     | mean x: 1760343087.4180672
[2025-10-13 08:15:33] 2025-10-13 12:14:44,364 | INFO     | mean y: 2075434.8340336136
[2025-10-13 08:15:33] 2025-10-13 12:14:44,364 | INFO     | -- intersect: -5354947361.745278
[2025-10-13 08:15:33] 2025-10-13 12:14:44,364 | INFO     | intersect: -5354947361.745278
[2025-10-13 08:15:33] 2025-10-13 12:14:44,364 | INFO     | chi2: 1.8023961808096947
[2025-10-13 08:15:33] 2025-10-13 12:14:44,365 | INFO     | current chi2=1.8023961808096947 (change=57.10906678129908 %)
[2025-10-13 08:15:33] 2025-10-13 12:14:44,396 | INFO     | sum of square deviations: 32398246347.545815
[2025-10-13 08:15:33] 2025-10-13 12:14:44,411 | INFO     | sum of deviations: 48803720378.95739
[2025-10-13 08:15:33] 2025-10-13 12:14:44,411 | INFO     | mean x: 1760343239.927813
[2025-10-13 08:15:33] 2025-10-13 12:14:44,411 | INFO     | mean y: 2083166.881104034
[2025-10-13 08:15:33] 2025-10-13 12:14:44,411 | INFO     | -- intersect: -2649643668.294736
[2025-10-13 08:15:33] 2025-10-13 12:14:44,411 | INFO     | intersect: -2649643668.294736
[2025-10-13 08:15:33] 2025-10-13 12:14:44,412 | INFO     | chi2: 1.1548280189047246
[2025-10-13 08:15:33] 2025-10-13 12:14:44,412 | INFO     | current chi2=1.1548280189047246 (change=35.92818098482996 %)
[2025-10-13 08:15:33] 2025-10-13 12:14:44,414 | INFO     | sum of square deviations: 31377220078.568466
[2025-10-13 08:15:33] 2025-10-13 12:14:44,420 | INFO     | sum of deviations: 32881080441.032116
[2025-10-13 08:15:33] 2025-10-13 12:14:44,421 | INFO     | mean x: 1760343392.4356222
[2025-10-13 08:15:33] 2025-10-13 12:14:44,421 | INFO     | mean y: 2085537.2510729614
[2025-10-13 08:15:33] 2025-10-13 12:14:44,421 | INFO     | -- intersect: -1842628320.3047822
[2025-10-13 08:15:33] 2025-10-13 12:14:44,421 | INFO     | intersect: -1842628320.3047822
[2025-10-13 08:15:33] 2025-10-13 12:14:44,421 | INFO     | chi2: 1.0723652526400542
[2025-10-13 08:15:33] 2025-10-13 12:14:44,421 | INFO     | current chi2=1.0723652526400542 (change=7.140696702430264 %)
[2025-10-13 08:15:33] 2025-10-13 12:14:44,422 | INFO     | left removable region: 30
[2025-10-13 08:15:33] 2025-10-13 12:14:44,422 | INFO     | sum of square deviations: 27323399626.705795
[2025-10-13 08:15:33] 2025-10-13 12:14:44,426 | INFO     | sum of deviations: 37293515320.99551
[2025-10-13 08:15:33] 2025-10-13 12:14:44,426 | INFO     | mean x: 1760343666.9460673
[2025-10-13 08:15:33] 2025-10-13 12:14:44,426 | INFO     | mean y: 2094134.0831460673
[2025-10-13 08:15:33] 2025-10-13 12:14:44,426 | INFO     | -- intersect: -2400586513.6538606
[2025-10-13 08:15:33] 2025-10-13 12:14:44,426 | INFO     | intersect: -2400586513.6538606
[2025-10-13 08:15:33] 2025-10-13 12:14:44,427 | INFO     | chi2: 0.33615218315005396
[2025-10-13 08:15:33] 2025-10-13 12:14:44,427 | INFO     | -- intersect: -2400586513.6538606
[2025-10-13 08:15:33] 2025-10-13 12:14:44,427 | INFO     | current memory leak: 1.36 B/s (using 445 data points, chi2=0.34)
[2025-10-13 08:15:33] 2025-10-13 12:14:44,428 | INFO     | could have reported an average CPU frequency of 2653 MHz (19 samples)
[2025-10-13 08:15:33] 2025-10-13 12:14:44,428 | INFO     | ..............................
[2025-10-13 08:15:33] 2025-10-13 12:14:44,429 | INFO     | . Timing measurements:
[2025-10-13 08:15:33] 2025-10-13 12:14:44,429 | INFO     | . get job = 0 s
[2025-10-13 08:15:33] 2025-10-13 12:14:44,429 | INFO     | . initial setup = 6 s
[2025-10-13 08:15:33] 2025-10-13 12:14:44,429 | INFO     | . payload setup = 39 s
[2025-10-13 08:15:33] 2025-10-13 12:14:44,429 | INFO     | . stage-in = 0 s
[2025-10-13 08:15:33] 2025-10-13 12:14:44,429 | INFO     | . payload execution = 29359 s
[2025-10-13 08:15:33] 2025-10-13 12:14:44,429 | INFO     | . stage-out = 8 s
[2025-10-13 08:15:33] 2025-10-13 12:14:44,429 | INFO     | . log creation = 1 s
[2025-10-13 08:15:33] 2025-10-13 12:14:44,429 | INFO     | ..............................
[2025-10-13 08:15:33] 2025-10-13 12:14:44,905 | INFO     | 
[2025-10-13 08:15:33] 2025-10-13 12:14:44,906 | INFO     | job summary report
[2025-10-13 08:15:33] 2025-10-13 12:14:44,906 | INFO     | --------------------------------------------------
[2025-10-13 08:15:33] 2025-10-13 12:14:44,906 | INFO     | PanDA job id: 6840750710
[2025-10-13 08:15:33] 2025-10-13 12:14:44,906 | INFO     | task id: 46676269
[2025-10-13 08:15:33] 2025-10-13 12:14:44,906 | INFO     | errors: (none)
[2025-10-13 08:15:33] 2025-10-13 12:14:44,906 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 08:15:33] 2025-10-13 12:14:44,906 | INFO     | pilot state: finished 
[2025-10-13 08:15:33] 2025-10-13 12:14:44,906 | INFO     | transexitcode: 0
[2025-10-13 08:15:33] 2025-10-13 12:14:44,906 | INFO     | exeerrorcode: 0
[2025-10-13 08:15:33] 2025-10-13 12:14:44,906 | INFO     | exeerrordiag: 
[2025-10-13 08:15:33] 2025-10-13 12:14:44,906 | INFO     | exitcode: 0
[2025-10-13 08:15:33] 2025-10-13 12:14:44,907 | INFO     | exitmsg: OK
[2025-10-13 08:15:33] 2025-10-13 12:14:44,907 | INFO     | cpuconsumptiontime: 45436 s
[2025-10-13 08:15:33] 2025-10-13 12:14:44,907 | INFO     | nevents: 400
[2025-10-13 08:15:33] 2025-10-13 12:14:44,907 | INFO     | neventsw: 0
[2025-10-13 08:15:33] 2025-10-13 12:14:44,907 | INFO     | pid: 214978
[2025-10-13 08:15:33] 2025-10-13 12:14:44,907 | INFO     | pgrp: 214978
[2025-10-13 08:15:33] 2025-10-13 12:14:44,907 | INFO     | corecount: 8
[2025-10-13 08:15:33] 2025-10-13 12:14:44,907 | INFO     | event service: False
[2025-10-13 08:15:33] 2025-10-13 12:14:44,907 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 23: 2348913, 34: 2348941, 38: 2349231, 45: 2349387, 29403: 2386326, 29404: 2386325, 29414: 2395435, 29459: 2395573}
[2025-10-13 08:15:33] 2025-10-13 12:14:44,907 | INFO     | --------------------------------------------------
[2025-10-13 08:15:33] 2025-10-13 12:14:44,907 | INFO     | 
[2025-10-13 08:15:33] 2025-10-13 12:14:44,907 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 08:15:33] 2025-10-13 12:14:44,982 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 08:15:33] 2025-10-13 12:14:44,982 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 08:15:33] 2025-10-13 12:14:44,982 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 08:15:33] 2025-10-13 12:14:44,982 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 08:15:33] 2025-10-13 12:14:44,982 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 08:15:33] 2025-10-13 12:14:44,982 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 08:15:33] 2025-10-13 12:14:44,982 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 08:15:33] 2025-10-13 12:14:44,982 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 08:15:33] 2025-10-13 12:14:44,982 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 08:15:33] 2025-10-13 12:14:44,983 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 08:15:33] 2025-10-13 12:14:44,983 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 08:15:33] 2025-10-13 12:14:44,983 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 08:15:33] 2025-10-13 12:14:44,983 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 08:15:33] 2025-10-13 12:14:44,983 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 08:15:33] 2025-10-13 12:14:44,983 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 08:15:33] 2025-10-13 12:14:44,983 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 08:15:33] 2025-10-13 12:14:44,983 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 08:15:33] 2025-10-13 12:14:44,983 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 08:15:33] 2025-10-13 12:14:44,983 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 08:15:33] 2025-10-13 12:14:44,983 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 08:15:33] 2025-10-13 12:14:44,983 | INFO     | job 6840750710 has completed (purged errors)
[2025-10-13 08:15:33] 2025-10-13 12:14:44,984 | INFO     | overall cleanup function is called
[2025-10-13 08:15:33] 2025-10-13 12:14:46,007 | INFO     | --- collectZombieJob: --- 10, [214978]
[2025-10-13 08:15:33] 2025-10-13 12:14:46,007 | INFO     | zombie collector waiting for pid 214978
[2025-10-13 08:15:33] 2025-10-13 12:14:46,008 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 08:15:33] 2025-10-13 12:14:46,008 | INFO     | collected zombie processes
[2025-10-13 08:15:33] 2025-10-13 12:14:46,008 | INFO     | will attempt to kill all subprocesses of pid=214978
[2025-10-13 08:15:33] 2025-10-13 12:14:46,954 | INFO     | process IDs to be killed: [214978] (in reverse order)
[2025-10-13 08:15:33] 2025-10-13 12:14:47,166 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 08:15:33] 2025-10-13 12:14:47,166 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 08:15:33] 2025-10-13 12:14:47,205 | INFO     | did not find any defunct processes belonging to 214978
[2025-10-13 08:15:33] 2025-10-13 12:14:47,336 | INFO     | did not find any defunct processes belonging to 214978
[2025-10-13 08:15:33] 2025-10-13 12:14:47,336 | INFO     | ready for new job
[2025-10-13 08:15:33] 2025-10-13 12:14:47,336 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 08:15:33] 2025-10-13 12:14:47,375 | INFO     | ***************************************
[2025-10-13 08:15:33] 2025-10-13 12:14:47,376 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 08:15:33] 2025-10-13 12:14:47,376 | INFO     | ***************************************
[2025-10-13 08:15:33] 2025-10-13 12:14:47,377 | INFO     | 
[2025-10-13 08:15:33] 2025-10-13 12:14:47,406 | INFO     | architecture information:
[2025-10-13 08:15:33] 2025-10-13 12:14:47,442 | INFO     | executing command: cat /etc/os-release
[2025-10-13 08:15:33] 2025-10-13 12:14:47,639 | INFO     | cat /etc/os-release:
[2025-10-13 08:15:33] NAME="CentOS Linux"
[2025-10-13 08:15:33] VERSION="7 (Core)"
[2025-10-13 08:15:33] ID="centos"
[2025-10-13 08:15:33] ID_LIKE="rhel fedora"
[2025-10-13 08:15:33] VERSION_ID="7"
[2025-10-13 08:15:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 08:15:33] ANSI_COLOR="0;31"
[2025-10-13 08:15:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 08:15:33] HOME_URL="https://www.centos.org/"
[2025-10-13 08:15:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 08:15:33] 
[2025-10-13 08:15:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 08:15:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 08:15:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 08:15:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 08:15:33] 
[2025-10-13 08:15:33] 2025-10-13 12:14:47,640 | INFO     | ***************************************
[2025-10-13 08:15:33] 2025-10-13 12:14:48,144 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 08:15:33] 2025-10-13 12:14:48,163 | INFO     | sufficient remaining disk space (74569482240 B)
[2025-10-13 08:15:33] 2025-10-13 12:14:48,164 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 08:15:33] 2025-10-13 12:14:48,164 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 08:15:33] 2025-10-13 12:14:48,164 | INFO     | update_server=False
[2025-10-13 08:15:33] 2025-10-13 12:14:48,164 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 08:15:33] 2025-10-13 12:14:48,165 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:15:33] 2025-10-13 12:14:48,165 | INFO     | aborting loop
[2025-10-13 08:15:33] 2025-10-13 12:14:48,165 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:15:33] 2025-10-13 12:14:48,441 | INFO     | all payload control threads have been joined
[2025-10-13 08:15:33] 2025-10-13 12:14:48,442 | INFO     | all job control threads have been joined
[2025-10-13 08:15:33] 2025-10-13 12:14:48,987 | INFO     | all data control threads have been joined
[2025-10-13 08:15:33] 2025-10-13 12:14:49,172 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:15:33] 2025-10-13 12:14:49,173 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:15:33] 2025-10-13 12:14:49,381 | INFO     | [job] validate thread has finished
[2025-10-13 08:15:33] 2025-10-13 12:14:49,447 | INFO     | [job] control thread has finished
[2025-10-13 08:15:33] 2025-10-13 12:14:49,470 | INFO     | [payload] control thread has finished
[2025-10-13 08:15:33] 2025-10-13 12:14:49,683 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:15:33] 2025-10-13 12:14:49,716 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:15:33] 2025-10-13 12:14:49,855 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:15:33] 2025-10-13 12:14:49,938 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:15:33] 2025-10-13 12:14:49,993 | INFO     | [data] control thread has finished
[2025-10-13 08:15:33] 2025-10-13 12:14:50,178 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:15:33] 2025-10-13 12:14:50,396 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:15:33] 2025-10-13 12:14:50,492 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:15:33] 2025-10-13 12:14:50,498 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:15:33] 2025-10-13 12:14:50,536 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:15:33] 2025-10-13 12:14:50,737 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:15:33] 2025-10-13 12:14:50,944 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:15:33] 2025-10-13 12:14:54,756 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:15:33] 2025-10-13 12:15:18,499 | INFO     | PID=180439 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 08:15:33] 2025-10-13 12:15:18,500 | INFO     | .. there are 21 such processes running
[2025-10-13 08:15:33] 2025-10-13 12:15:18,500 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:15:33] 2025-10-13 12:15:18,500 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:15:33] 2025-10-13 12:15:18,500 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:15:33] 2025-10-13 12:15:23,902 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:15:33] 2025-10-13 12:15:24,368 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140597445424960)>', '<ExcThread(monitor, started 140596777817856)>']
[2025-10-13 08:15:33] 2025-10-13 12:15:24,543 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:15:33] 2025-10-13 12:15:24,543 | INFO     | [monitor] control thread has ended
[2025-10-13 08:15:33] 2025-10-13 12:15:29,394 | INFO     | all workflow threads have been joined
[2025-10-13 08:15:33] 2025-10-13 12:15:29,394 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:15:33] 2025-10-13 12:15:29,395 | INFO     | traces error code: 0
[2025-10-13 08:15:33] 2025-10-13 12:15:29,395 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:15:33] 2025-10-13 12:15:30,899 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:15:33] 2025-10-13 12:15:30,902 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:15:33] 2025-10-13 12:15:30,923 [wrapper] pilotpid: 180439
[2025-10-13 08:15:33] 2025-10-13 12:15:30,952 [wrapper] Pilot exit status: 0
[2025-10-13 08:15:33] 2025-10-13 12:15:31,096 [wrapper] pandaids: 6840750710
[2025-10-13 08:15:33] 2025-10-13 12:15:32,199 [wrapper] cleanup supervisor_pilot 1461853 180441
[2025-10-13 08:15:33] 2025-10-13 12:15:32,235 [wrapper] Test setup, not cleaning
[2025-10-13 08:15:33] 2025-10-13 12:15:32,239 [wrapper] apfmon messages muted
[2025-10-13 08:15:33] 2025-10-13 12:15:32,244 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:15:33] 2025-10-13 12:15:32,248 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:15:33]  *** Error codes and diagnostics ***
[2025-10-13 08:15:33]     "exeErrorCode": 0,
[2025-10-13 08:15:33]     "exeErrorDiag": "",
[2025-10-13 08:15:33]     "pilotErrorCode": 0,
[2025-10-13 08:15:33]     "pilotErrorDiag": "",
[2025-10-13 08:15:33]  *** Listing of results directory ***
[2025-10-13 08:15:33] total 419736
[2025-10-13 08:15:33] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 17:12 pilot3.tar.gz
[2025-10-13 08:15:33] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 17:28 queuedata.json
[2025-10-13 08:15:33] -rwx------. 1 boincer umatlas     36292 Oct 12 17:28 runpilot2-wrapper.sh
[2025-10-13 08:15:33] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:15:33] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:01 run_atlas
[2025-10-13 08:15:33] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:01 job.xml
[2025-10-13 08:15:33] -rw-r--r--. 2 boincer umatlas 223706001 Oct 13 00:01 EVNT.46676267._004830.pool.root.1
[2025-10-13 08:15:33] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:01 start_atlas.sh
[2025-10-13 08:15:33] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:01 shared
[2025-10-13 08:15:33] -rw-r--r--. 2 boincer umatlas    569676 Oct 13 00:01 input.tar.gz
[2025-10-13 08:15:33] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:01 boinc_lockfile
[2025-10-13 08:15:33] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:01 pandaJob.out
[2025-10-13 08:15:33] -rw-------. 1 boincer umatlas    974373 Oct 13 00:02 agis_schedconf.cvmfs.json
[2025-10-13 08:15:33] drwx------. 5 boincer umatlas      4096 Oct 13 00:02 pilot3
[2025-10-13 08:15:33] -rw-------. 1 boincer umatlas 194100581 Oct 13 08:12 HITS.46676269._089929.pool.root.1
[2025-10-13 08:15:33] -rw-r--r--. 1 boincer umatlas       531 Oct 13 08:12 boinc_task_state.xml
[2025-10-13 08:15:33] -rw-r--r--. 1 boincer umatlas      6844 Oct 13 08:13 init_data.xml
[2025-10-13 08:15:33] -rw-------. 1 boincer umatlas      1040 Oct 13 08:13 memory_monitor_summary.json
[2025-10-13 08:15:33] -rw-------. 1 boincer umatlas   1560580 Oct 13 08:13 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:15:33] -rw-------. 1 boincer umatlas    631564 Oct 13 08:13 log.46676269._089929.job.log.tgz.1
[2025-10-13 08:15:33] -rw-------. 1 boincer umatlas        95 Oct 13 08:14 pilot_heartbeat.json
[2025-10-13 08:15:33] -rw-------. 1 boincer umatlas      7823 Oct 13 08:14 heartbeat.json
[2025-10-13 08:15:33] -rw-------. 1 boincer umatlas      4823 Oct 13 08:15 pilotlog.txt
[2025-10-13 08:15:33] -rw-------. 1 boincer umatlas   3419837 Oct 13 08:15 log.46676269._089929.job.log.1
[2025-10-13 08:15:33] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 08:15 boinc_mmap_file
[2025-10-13 08:15:33] -rw-------. 1 boincer umatlas       357 Oct 13 08:15 output.list
[2025-10-13 08:15:33] -rw-r--r--. 1 boincer umatlas        28 Oct 13 08:15 wrapper_checkpoint.txt
[2025-10-13 08:15:33] -rw-r--r--. 1 boincer umatlas       620 Oct 13 08:15 runtime_log
[2025-10-13 08:15:33] -rw-------. 1 boincer umatlas   4075520 Oct 13 08:15 result.tar.gz
[2025-10-13 08:15:33] -rw-------. 1 boincer umatlas       658 Oct 13 08:15 XLvNDmknIS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0flNDmu2C4Wm.diag
[2025-10-13 08:15:33] -rw-r--r--. 1 boincer umatlas      8709 Oct 13 08:15 runtime_log.err
[2025-10-13 08:15:33] -rw-r--r--. 1 boincer umatlas     21046 Oct 13 08:15 stderr.txt
[2025-10-13 08:15:33] HITS file was successfully produced:
[2025-10-13 08:15:33] -rw-------. 1 boincer umatlas 194100581 Oct 13 08:12 shared/HITS.pool.root.1
[2025-10-13 08:15:33]  *** Contents of shared directory: ***
[2025-10-13 08:15:33] total 412576
[2025-10-13 08:15:33] -rw-r--r--. 2 boincer umatlas 223706001 Oct 13 00:01 ATLAS.root_0
[2025-10-13 08:15:33] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:01 start_atlas.sh
[2025-10-13 08:15:33] -rw-r--r--. 2 boincer umatlas    569676 Oct 13 00:01 input.tar.gz
[2025-10-13 08:15:33] -rw-------. 1 boincer umatlas 194100581 Oct 13 08:12 HITS.pool.root.1
[2025-10-13 08:15:33] -rw-------. 1 boincer umatlas   4075520 Oct 13 08:15 result.tar.gz
08:15:34 (172119): run_atlas exited; CPU time 46380.014459
08:15:34 (172119): called boinc_finish(0)

</stderr_txt>
]]>

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