Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:09:14 (12771): wrapper (7.7.26015): starting
22:09:14 (12771): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 22:09:14] Arguments: --nthreads 8
[2025-10-12 22:09:14] Threads: 8
[2025-10-12 22:09:14] Checking for CVMFS
[2025-10-12 22:09:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 22:09:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 22:09:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 22:09:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 22:09:14] 2.11.2.0 28705 53864 123144 151644 3 57 16712746 18432001 1833 130560 0 49332332 99.976 2415009 37272 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 22:09:14] CVMFS is ok
[2025-10-12 22:09:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 22:09:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 22:09:14] Further information can be found at the LHC@home message board.
[2025-10-12 22:09:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 22:09:14] Checking for apptainer binary...
[2025-10-12 22:09:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 22:09:14] Running /usr/bin/apptainer --version
[2025-10-12 22:09:14] apptainer version 1.3.2-1.el7
[2025-10-12 22:09:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 22:09:15] c-206-27.aglt2.org
[2025-10-12 22:09:15] apptainer works
[2025-10-12 22:09:15] Set ATHENA_PROC_NUMBER=8
[2025-10-12 22:09:15] Set ATHENA_CORE_NUMBER=8
[2025-10-12 22:09:15] Starting ATLAS job with PandaID=6840715238
[2025-10-12 22:09:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 01:05:49]  *** The last 200 lines of the pilot log: ***
[2025-10-13 01:05:49] 2025-10-13 05:05:14,738 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 01:05:49] 2025-10-13 05:05:14,739 | INFO     | time since job start (10548s) is within the limit (172800.0s)
[2025-10-13 01:05:49] 2025-10-13 05:05:14,741 | INFO     | fitting pss+swap vs Time
[2025-10-13 01:05:49] 2025-10-13 05:05:14,741 | INFO     | sum of square deviations: 1605470102.0
[2025-10-13 01:05:49] 2025-10-13 05:05:14,742 | INFO     | sum of deviations: 18309576695.0
[2025-10-13 01:05:49] 2025-10-13 05:05:14,742 | INFO     | mean x: 1760326637.0
[2025-10-13 01:05:49] 2025-10-13 05:05:14,742 | INFO     | mean y: 2448488.6994219655
[2025-10-13 01:05:49] 2025-10-13 05:05:14,742 | INFO     | -- intersect: -20073188876.48829
[2025-10-13 01:05:49] 2025-10-13 05:05:14,742 | INFO     | intersect: -20073188876.48829
[2025-10-13 01:05:49] 2025-10-13 05:05:14,742 | INFO     | chi2: 2.125564454439223
[2025-10-13 01:05:49] 2025-10-13 05:05:14,743 | INFO     | sum of square deviations: 1470248962.0
[2025-10-13 01:05:49] 2025-10-13 05:05:14,743 | INFO     | sum of deviations: 29217959736.5
[2025-10-13 01:05:49] 2025-10-13 05:05:14,744 | INFO     | mean x: 1760326484.5
[2025-10-13 01:05:49] 2025-10-13 05:05:14,744 | INFO     | mean y: 2460478.160714286
[2025-10-13 01:05:49] 2025-10-13 05:05:14,744 | INFO     | -- intersect: -34980151090.733284
[2025-10-13 01:05:49] 2025-10-13 05:05:14,744 | INFO     | intersect: -34980151090.733284
[2025-10-13 01:05:49] 2025-10-13 05:05:14,744 | INFO     | chi2: 1.2896685624017266
[2025-10-13 01:05:49] 2025-10-13 05:05:14,744 | INFO     | current chi2=1.2896685624017266 (change=39.32583132408594 %)
[2025-10-13 01:05:49] 2025-10-13 05:05:14,745 | INFO     | sum of square deviations: 1342841922.0
[2025-10-13 01:05:49] 2025-10-13 05:05:14,745 | INFO     | sum of deviations: 28180489944.999996
[2025-10-13 01:05:49] 2025-10-13 05:05:14,745 | INFO     | mean x: 1760326332.0
[2025-10-13 01:05:49] 2025-10-13 05:05:14,745 | INFO     | mean y: 2459236.018404908
[2025-10-13 01:05:49] 2025-10-13 05:05:14,746 | INFO     | -- intersect: -36939237091.84224
[2025-10-13 01:05:49] 2025-10-13 05:05:14,746 | INFO     | intersect: -36939237091.84224
[2025-10-13 01:05:49] 2025-10-13 05:05:14,746 | INFO     | chi2: 1.2901137569318337
[2025-10-13 01:05:49] 2025-10-13 05:05:14,746 | INFO     | current chi2=1.2901137569318337 (change=-0.03452007307040847 %)
[2025-10-13 01:05:49] 2025-10-13 05:05:14,746 | INFO     | right removable region: 162
[2025-10-13 01:05:49] 2025-10-13 05:05:14,746 | INFO     | sum of square deviations: 1470248962.0
[2025-10-13 01:05:49] 2025-10-13 05:05:14,747 | INFO     | sum of deviations: -4697556198.0
[2025-10-13 01:05:49] 2025-10-13 05:05:14,747 | INFO     | mean x: 1760326789.5
[2025-10-13 01:05:49] 2025-10-13 05:05:14,747 | INFO     | mean y: 2474053.6904761903
[2025-10-13 01:05:49] 2025-10-13 05:05:14,747 | INFO     | -- intersect: 5626850764.198343
[2025-10-13 01:05:49] 2025-10-13 05:05:14,748 | INFO     | intersect: 5626850764.198343
[2025-10-13 01:05:49] 2025-10-13 05:05:14,748 | INFO     | chi2: 0.8699815806337678
[2025-10-13 01:05:49] 2025-10-13 05:05:14,748 | INFO     | current chi2=0.8699815806337678 (change=59.07056223033751 %)
[2025-10-13 01:05:49] 2025-10-13 05:05:14,748 | INFO     | sum of square deviations: 1342841922.0
[2025-10-13 01:05:49] 2025-10-13 05:05:14,749 | INFO     | sum of deviations: -5027120714.999999
[2025-10-13 01:05:49] 2025-10-13 05:05:14,749 | INFO     | mean x: 1760326942.0
[2025-10-13 01:05:49] 2025-10-13 05:05:14,749 | INFO     | mean y: 2474449.4846625766
[2025-10-13 01:05:49] 2025-10-13 05:05:14,749 | INFO     | -- intersect: 6592510022.786345
[2025-10-13 01:05:49] 2025-10-13 05:05:14,749 | INFO     | intersect: 6592510022.786345
[2025-10-13 01:05:49] 2025-10-13 05:05:14,750 | INFO     | chi2: 0.8604293756197278
[2025-10-13 01:05:49] 2025-10-13 05:05:14,750 | INFO     | current chi2=0.8604293756197278 (change=1.0979778453563869 %)
[2025-10-13 01:05:49] 2025-10-13 05:05:14,750 | INFO     | left removable region: 20
[2025-10-13 01:05:49] 2025-10-13 05:05:14,750 | INFO     | sum of square deviations: 887813855.5
[2025-10-13 01:05:49] 2025-10-13 05:05:14,751 | INFO     | sum of deviations: 3550592596.0000005
[2025-10-13 01:05:49] 2025-10-13 05:05:14,751 | INFO     | mean x: 1760326911.5
[2025-10-13 01:05:49] 2025-10-13 05:05:14,751 | INFO     | mean y: 2490480.028169014
[2025-10-13 01:05:49] 2025-10-13 05:05:14,751 | INFO     | -- intersect: -7037502937.276015
[2025-10-13 01:05:49] 2025-10-13 05:05:14,751 | INFO     | intersect: -7037502937.276015
[2025-10-13 01:05:49] 2025-10-13 05:05:14,751 | INFO     | chi2: 0.00020275899475484857
[2025-10-13 01:05:49] 2025-10-13 05:05:14,751 | INFO     | -- intersect: -7037502937.276015
[2025-10-13 01:05:49] 2025-10-13 05:05:14,752 | INFO     | current memory leak: 4.00 B/s (using 142 data points, chi2=0.00)
[2025-10-13 01:05:49] 2025-10-13 05:05:14,752 | INFO     | could have reported an average CPU frequency of 2548 MHz (9 samples)
[2025-10-13 01:05:49] 2025-10-13 05:05:14,752 | INFO     | ..............................
[2025-10-13 01:05:49] 2025-10-13 05:05:14,752 | INFO     | . Timing measurements:
[2025-10-13 01:05:49] 2025-10-13 05:05:14,752 | INFO     | . get job = 0 s
[2025-10-13 01:05:49] 2025-10-13 05:05:14,752 | INFO     | . initial setup = 2 s
[2025-10-13 01:05:49] 2025-10-13 05:05:14,752 | INFO     | . payload setup = 4 s
[2025-10-13 01:05:49] 2025-10-13 05:05:14,752 | INFO     | . stage-in = 0 s
[2025-10-13 01:05:49] 2025-10-13 05:05:14,753 | INFO     | . payload execution = 10518 s
[2025-10-13 01:05:49] 2025-10-13 05:05:14,753 | INFO     | . stage-out = 1 s
[2025-10-13 01:05:49] 2025-10-13 05:05:14,753 | INFO     | . log creation = 0 s
[2025-10-13 01:05:49] 2025-10-13 05:05:14,753 | INFO     | ..............................
[2025-10-13 01:05:49] 2025-10-13 05:05:14,827 | INFO     | 
[2025-10-13 01:05:49] 2025-10-13 05:05:14,827 | INFO     | job summary report
[2025-10-13 01:05:49] 2025-10-13 05:05:14,827 | INFO     | --------------------------------------------------
[2025-10-13 01:05:49] 2025-10-13 05:05:14,828 | INFO     | PanDA job id: 6840715238
[2025-10-13 01:05:49] 2025-10-13 05:05:14,828 | INFO     | task id: 46676269
[2025-10-13 01:05:49] 2025-10-13 05:05:14,828 | INFO     | errors: (none)
[2025-10-13 01:05:49] 2025-10-13 05:05:14,828 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 01:05:49] 2025-10-13 05:05:14,828 | INFO     | pilot state: finished 
[2025-10-13 01:05:49] 2025-10-13 05:05:14,828 | INFO     | transexitcode: 0
[2025-10-13 01:05:49] 2025-10-13 05:05:14,828 | INFO     | exeerrorcode: 0
[2025-10-13 01:05:49] 2025-10-13 05:05:14,828 | INFO     | exeerrordiag: 
[2025-10-13 01:05:49] 2025-10-13 05:05:14,828 | INFO     | exitcode: 0
[2025-10-13 01:05:49] 2025-10-13 05:05:14,828 | INFO     | exitmsg: OK
[2025-10-13 01:05:49] 2025-10-13 05:05:14,829 | INFO     | cpuconsumptiontime: 79422 s
[2025-10-13 01:05:49] 2025-10-13 05:05:14,829 | INFO     | nevents: 400
[2025-10-13 01:05:49] 2025-10-13 05:05:14,829 | INFO     | neventsw: 0
[2025-10-13 01:05:49] 2025-10-13 05:05:14,829 | INFO     | pid: 24083
[2025-10-13 01:05:49] 2025-10-13 05:05:14,829 | INFO     | pgrp: 24083
[2025-10-13 01:05:49] 2025-10-13 05:05:14,829 | INFO     | corecount: 8
[2025-10-13 01:05:49] 2025-10-13 05:05:14,829 | INFO     | event service: False
[2025-10-13 01:05:49] 2025-10-13 05:05:14,829 | INFO     | sizes: {0: 2348686, 1: 2348885, 4: 2349147, 11: 2349175, 10526: 2378033, 10527: 2387031, 10529: 2387215, 10533: 2387473}
[2025-10-13 01:05:49] 2025-10-13 05:05:14,829 | INFO     | --------------------------------------------------
[2025-10-13 01:05:49] 2025-10-13 05:05:14,829 | INFO     | 
[2025-10-13 01:05:49] 2025-10-13 05:05:14,830 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 01:05:49] 2025-10-13 05:05:14,842 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 01:05:49] 2025-10-13 05:05:14,843 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 01:05:49] 2025-10-13 05:05:14,843 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 01:05:49] 2025-10-13 05:05:14,843 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 01:05:49] 2025-10-13 05:05:14,843 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 01:05:49] 2025-10-13 05:05:14,843 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 01:05:49] 2025-10-13 05:05:14,843 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 01:05:49] 2025-10-13 05:05:14,843 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 01:05:49] 2025-10-13 05:05:14,844 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 01:05:49] 2025-10-13 05:05:14,844 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 01:05:49] 2025-10-13 05:05:14,844 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 01:05:49] 2025-10-13 05:05:14,844 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 01:05:49] 2025-10-13 05:05:14,844 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 01:05:49] 2025-10-13 05:05:14,844 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 01:05:49] 2025-10-13 05:05:14,844 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 01:05:49] 2025-10-13 05:05:14,844 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 01:05:49] 2025-10-13 05:05:14,844 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 01:05:49] 2025-10-13 05:05:14,845 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 01:05:49] 2025-10-13 05:05:14,845 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 01:05:49] 2025-10-13 05:05:14,845 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 01:05:49] 2025-10-13 05:05:14,845 | INFO     | job 6840715238 has completed (purged errors)
[2025-10-13 01:05:49] 2025-10-13 05:05:14,845 | INFO     | overall cleanup function is called
[2025-10-13 01:05:49] 2025-10-13 05:05:15,850 | INFO     | --- collectZombieJob: --- 10, [24083]
[2025-10-13 01:05:49] 2025-10-13 05:05:15,850 | INFO     | zombie collector waiting for pid 24083
[2025-10-13 01:05:49] 2025-10-13 05:05:15,851 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 01:05:49] 2025-10-13 05:05:15,851 | INFO     | collected zombie processes
[2025-10-13 01:05:49] 2025-10-13 05:05:15,851 | INFO     | will attempt to kill all subprocesses of pid=24083
[2025-10-13 01:05:49] 2025-10-13 05:05:15,933 | INFO     | PID=16468 has CPU usage=11.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 01:05:49] 2025-10-13 05:05:15,933 | INFO     | .. there are 3 such processes running
[2025-10-13 01:05:49] 2025-10-13 05:05:16,033 | INFO     | process IDs to be killed: [24083] (in reverse order)
[2025-10-13 01:05:49] 2025-10-13 05:05:16,071 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 01:05:49] 2025-10-13 05:05:16,072 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 01:05:49] 2025-10-13 05:05:16,074 | INFO     | did not find any defunct processes belonging to 24083
[2025-10-13 01:05:49] 2025-10-13 05:05:16,077 | INFO     | did not find any defunct processes belonging to 24083
[2025-10-13 01:05:49] 2025-10-13 05:05:16,077 | INFO     | ready for new job
[2025-10-13 01:05:49] 2025-10-13 05:05:16,077 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 01:05:49] 2025-10-13 05:05:16,078 | INFO     | ***************************************
[2025-10-13 01:05:49] 2025-10-13 05:05:16,079 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 01:05:49] 2025-10-13 05:05:16,079 | INFO     | ***************************************
[2025-10-13 01:05:49] 2025-10-13 05:05:16,079 | INFO     | 
[2025-10-13 01:05:49] 2025-10-13 05:05:16,080 | INFO     | architecture information:
[2025-10-13 01:05:49] 2025-10-13 05:05:16,080 | INFO     | executing command: cat /etc/os-release
[2025-10-13 01:05:49] 2025-10-13 05:05:16,090 | INFO     | cat /etc/os-release:
[2025-10-13 01:05:49] NAME="CentOS Linux"
[2025-10-13 01:05:49] VERSION="7 (Core)"
[2025-10-13 01:05:49] ID="centos"
[2025-10-13 01:05:49] ID_LIKE="rhel fedora"
[2025-10-13 01:05:49] VERSION_ID="7"
[2025-10-13 01:05:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 01:05:49] ANSI_COLOR="0;31"
[2025-10-13 01:05:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 01:05:49] HOME_URL="https://www.centos.org/"
[2025-10-13 01:05:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 01:05:49] 
[2025-10-13 01:05:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 01:05:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 01:05:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 01:05:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 01:05:49] 
[2025-10-13 01:05:49] 2025-10-13 05:05:16,090 | INFO     | ***************************************
[2025-10-13 01:05:49] 2025-10-13 05:05:16,593 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 01:05:49] 2025-10-13 05:05:16,689 | INFO     | sufficient remaining disk space (28544335872 B)
[2025-10-13 01:05:49] 2025-10-13 05:05:16,689 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 01:05:49] 2025-10-13 05:05:16,689 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 01:05:49] 2025-10-13 05:05:16,689 | INFO     | update_server=False
[2025-10-13 01:05:49] 2025-10-13 05:05:16,690 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 01:05:49] 2025-10-13 05:05:16,690 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 01:05:49] 2025-10-13 05:05:16,690 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:05:49] 2025-10-13 05:05:16,690 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 01:05:49] 2025-10-13 05:05:16,691 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 01:05:49] 2025-10-13 05:05:16,691 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 01:05:49] 2025-10-13 05:05:16,691 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 01:05:49] 2025-10-13 05:05:16,690 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:05:49] 2025-10-13 05:05:16,692 | INFO     | aborting loop
[2025-10-13 01:05:49] 2025-10-13 05:05:17,350 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 01:05:49] 2025-10-13 05:05:17,437 | INFO     | all data control threads have been joined
[2025-10-13 01:05:49] 2025-10-13 05:05:17,695 | INFO     | [job] retrieve thread has finished
[2025-10-13 01:05:49] 2025-10-13 05:05:17,696 | INFO     | [job] queue monitor thread has finished
[2025-10-13 01:05:49] 2025-10-13 05:05:17,696 | INFO     | [job] job monitor thread has finished
[2025-10-13 01:05:49] 2025-10-13 05:05:17,723 | INFO     | [data] copytool_in thread has finished
[2025-10-13 01:05:49] 2025-10-13 05:05:17,918 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 01:05:49] 2025-10-13 05:05:18,063 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 01:05:49] 2025-10-13 05:05:18,119 | INFO     | all payload control threads have been joined
[2025-10-13 01:05:49] 2025-10-13 05:05:18,284 | INFO     | [job] validate thread has finished
[2025-10-13 01:05:49] 2025-10-13 05:05:18,310 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 01:05:49] 2025-10-13 05:05:18,356 | INFO     | all job control threads have been joined
[2025-10-13 01:05:49] 2025-10-13 05:05:18,402 | INFO     | [payload] failed_post thread has finished
[2025-10-13 01:05:49] 2025-10-13 05:05:18,439 | INFO     | [data] control thread has finished
[2025-10-13 01:05:49] 2025-10-13 05:05:18,800 | INFO     | [payload] validate_post thread has finished
[2025-10-13 01:05:49] 2025-10-13 05:05:19,125 | INFO     | [payload] control thread has finished
[2025-10-13 01:05:49] 2025-10-13 05:05:19,196 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 01:05:49] 2025-10-13 05:05:19,356 | INFO     | [data] copytool_out thread has finished
[2025-10-13 01:05:49] 2025-10-13 05:05:19,362 | INFO     | [job] control thread has finished
[2025-10-13 01:05:49] 2025-10-13 05:05:20,694 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 01:05:49] 2025-10-13 05:05:42,950 | INFO     | [monitor] cgroup control has ended
[2025-10-13 01:05:49] 2025-10-13 05:05:43,690 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140382808745792)>', '<ExcThread(monitor, started 140382138525440)>']
[2025-10-13 01:05:49] 2025-10-13 05:05:43,812 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 01:05:49] 2025-10-13 05:05:43,824 | INFO     | [monitor] control thread has ended
[2025-10-13 01:05:49] 2025-10-13 05:05:48,709 | INFO     | all workflow threads have been joined
[2025-10-13 01:05:49] 2025-10-13 05:05:48,709 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 01:05:49] 2025-10-13 05:05:48,710 | INFO     | traces error code: 0
[2025-10-13 01:05:49] 2025-10-13 05:05:48,710 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 01:05:49] 2025-10-13 05:05:48,824 [wrapper] ==== pilot stdout END ====
[2025-10-13 01:05:49] 2025-10-13 05:05:48,835 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 01:05:49] 2025-10-13 05:05:48,837 [wrapper] pilotpid: 16468
[2025-10-13 01:05:49] 2025-10-13 05:05:48,839 [wrapper] Pilot exit status: 0
[2025-10-13 01:05:49] 2025-10-13 05:05:48,849 [wrapper] pandaids: 6840715238
[2025-10-13 01:05:49] 2025-10-13 05:05:48,890 [wrapper] cleanup supervisor_pilot  1514 16469
[2025-10-13 01:05:49] 2025-10-13 05:05:48,893 [wrapper] Test setup, not cleaning
[2025-10-13 01:05:49] 2025-10-13 05:05:48,895 [wrapper] apfmon messages muted
[2025-10-13 01:05:49] 2025-10-13 05:05:48,898 [wrapper] ==== wrapper stdout END ====
[2025-10-13 01:05:49] 2025-10-13 05:05:48,900 [wrapper] ==== wrapper stderr END ====
[2025-10-13 01:05:49]  *** Error codes and diagnostics ***
[2025-10-13 01:05:49]     "exeErrorCode": 0,
[2025-10-13 01:05:49]     "exeErrorDiag": "",
[2025-10-13 01:05:49]     "pilotErrorCode": 0,
[2025-10-13 01:05:49]     "pilotErrorDiag": "",
[2025-10-13 01:05:49]  *** Listing of results directory ***
[2025-10-13 01:05:49] total 411016
[2025-10-13 01:05:49] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 15:50 pilot3.tar.gz
[2025-10-13 01:05:49] -rwx------ 1 boincer umatlas     36292 Oct 12 16:03 runpilot2-wrapper.sh
[2025-10-13 01:05:49] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 16:03 queuedata.json
[2025-10-13 01:05:49] -rw-r--r-- 1 boincer umatlas       100 Oct 12 22:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 01:05:49] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 22:09 run_atlas
[2025-10-13 01:05:49] -rw-r--r-- 1 boincer umatlas       105 Oct 12 22:09 job.xml
[2025-10-13 01:05:49] -rw-r--r-- 2 boincer umatlas 220836783 Oct 12 22:09 EVNT.46676267._004482.pool.root.1
[2025-10-13 01:05:49] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 22:09 start_atlas.sh
[2025-10-13 01:05:49] drwxrwx--x 2 boincer umatlas      4096 Oct 12 22:09 shared
[2025-10-13 01:05:49] -rw-r--r-- 2 boincer umatlas    569675 Oct 12 22:09 input.tar.gz
[2025-10-13 01:05:49] -rw-r--r-- 1 boincer umatlas         0 Oct 12 22:09 boinc_lockfile
[2025-10-13 01:05:49] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 22:09 pandaJob.out
[2025-10-13 01:05:49] -rw------- 1 boincer umatlas    975595 Oct 12 22:09 agis_schedconf.cvmfs.json
[2025-10-13 01:05:49] -rw------- 1 boincer umatlas   1560580 Oct 12 22:09 agis_ddmendpoints.agis.ALL.json
[2025-10-13 01:05:49] drwx------ 5 boincer umatlas      4096 Oct 12 22:09 pilot3
[2025-10-13 01:05:49] -rw-r--r-- 1 boincer umatlas      5952 Oct 13 01:01 init_data.xml
[2025-10-13 01:05:49] -rw------- 1 boincer umatlas 192341446 Oct 13 01:04 HITS.46676269._088190.pool.root.1
[2025-10-13 01:05:49] -rw------- 1 boincer umatlas        95 Oct 13 01:04 pilot_heartbeat.json
[2025-10-13 01:05:49] -rw-r--r-- 1 boincer umatlas       530 Oct 13 01:04 boinc_task_state.xml
[2025-10-13 01:05:49] -rw------- 1 boincer umatlas      1054 Oct 13 01:05 memory_monitor_summary.json
[2025-10-13 01:05:49] -rw------- 1 boincer umatlas    409671 Oct 13 01:05 log.46676269._088190.job.log.tgz.1
[2025-10-13 01:05:49] -rw------- 1 boincer umatlas      7855 Oct 13 01:05 heartbeat.json
[2025-10-13 01:05:49] -rw-r--r-- 1 boincer umatlas        28 Oct 13 01:05 wrapper_checkpoint.txt
[2025-10-13 01:05:49] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 01:05 boinc_mmap_file
[2025-10-13 01:05:49] -rw------- 1 boincer umatlas      4552 Oct 13 01:05 pilotlog.txt
[2025-10-13 01:05:49] -rw------- 1 boincer umatlas   1487787 Oct 13 01:05 log.46676269._088190.job.log.1
[2025-10-13 01:05:49] -rw------- 1 boincer umatlas       357 Oct 13 01:05 output.list
[2025-10-13 01:05:49] -rw-r--r-- 1 boincer umatlas       620 Oct 13 01:05 runtime_log
[2025-10-13 01:05:49] -rw------- 1 boincer umatlas   1914880 Oct 13 01:05 result.tar.gz
[2025-10-13 01:05:49] -rw-r--r-- 1 boincer umatlas      8704 Oct 13 01:05 runtime_log.err
[2025-10-13 01:05:49] -rw------- 1 boincer umatlas       662 Oct 13 01:05 iu2NDmxSHS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmTuUMDmcXgJGo.diag
[2025-10-13 01:05:49] -rw-r--r-- 1 boincer umatlas     20939 Oct 13 01:05 stderr.txt
[2025-10-13 01:05:49] HITS file was successfully produced:
[2025-10-13 01:05:49] -rw------- 1 boincer umatlas 192341446 Oct 13 01:04 shared/HITS.pool.root.1
[2025-10-13 01:05:49]  *** Contents of shared directory: ***
[2025-10-13 01:05:49] total 405952
[2025-10-13 01:05:49] -rw-r--r-- 2 boincer umatlas 220836783 Oct 12 22:09 ATLAS.root_0
[2025-10-13 01:05:49] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 22:09 start_atlas.sh
[2025-10-13 01:05:49] -rw-r--r-- 2 boincer umatlas    569675 Oct 12 22:09 input.tar.gz
[2025-10-13 01:05:49] -rw------- 1 boincer umatlas 192341446 Oct 13 01:04 HITS.pool.root.1
[2025-10-13 01:05:49] -rw------- 1 boincer umatlas   1914880 Oct 13 01:05 result.tar.gz
01:05:50 (12771): run_atlas exited; CPU time 79551.588181
01:05:50 (12771): called boinc_finish(0)

</stderr_txt>
]]>

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