Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:54:34 (29845): wrapper (7.7.26015): starting
21:54:34 (29845): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 21:54:34] Arguments: --nthreads 8
[2025-10-12 21:54:34] Threads: 8
[2025-10-12 21:54:34] Checking for CVMFS
[2025-10-12 21:54:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 21:54:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 21:54:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 21:54:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 21:54:35] 2.11.2.0 2913 9307 73732 151643 0 57 16298576 20275200 1 130560 0 6094294 99.990 310881 39933 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 21:54:35] CVMFS is ok
[2025-10-12 21:54:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 21:54:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 21:54:35] Further information can be found at the LHC@home message board.
[2025-10-12 21:54:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:54:35] Checking for apptainer binary...
[2025-10-12 21:54:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 21:54:35] Running /usr/bin/apptainer --version
[2025-10-12 21:54:35] apptainer version 1.3.2-1.el7
[2025-10-12 21:54:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:54:36] c-115-15.aglt2.org
[2025-10-12 21:54:36] apptainer works
[2025-10-12 21:54:36] Set ATHENA_PROC_NUMBER=8
[2025-10-12 21:54:36] Set ATHENA_CORE_NUMBER=8
[2025-10-12 21:54:36] Starting ATLAS job with PandaID=6840750804
[2025-10-12 21:54:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:47:10]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:47:10] 2025-10-13 03:46:29,508 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 23:47:10] 2025-10-13 03:46:29,509 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 23:47:10] 2025-10-13 03:46:29,509 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:47:10] 2025-10-13 03:46:29,511 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:47:10] 2025-10-13 03:46:29,511 | INFO     | sum of square deviations: 412686807.5
[2025-10-12 23:47:10] 2025-10-13 03:46:29,511 | INFO     | sum of deviations: 6323138732.000004
[2025-10-12 23:47:10] 2025-10-13 03:46:29,512 | INFO     | mean x: 1760323848.5
[2025-10-12 23:47:10] 2025-10-13 03:46:29,512 | INFO     | mean y: 2483399.1454545455
[2025-10-12 23:47:10] 2025-10-13 03:46:29,512 | INFO     | -- intersect: -26968991591.156136
[2025-10-12 23:47:10] 2025-10-13 03:46:29,512 | INFO     | intersect: -26968991591.156136
[2025-10-12 23:47:10] 2025-10-13 03:46:29,512 | INFO     | chi2: 2.136877698852187
[2025-10-12 23:47:10] 2025-10-13 03:46:29,512 | INFO     | sum of square deviations: 358927660.0
[2025-10-12 23:47:10] 2025-10-13 03:46:29,513 | INFO     | sum of deviations: 13076957960.0
[2025-10-12 23:47:10] 2025-10-13 03:46:29,513 | INFO     | mean x: 1760323696.0
[2025-10-12 23:47:10] 2025-10-13 03:46:29,513 | INFO     | mean y: 2501794.0476190476
[2025-10-12 23:47:10] 2025-10-13 03:46:29,513 | INFO     | -- intersect: -64132090030.34345
[2025-10-12 23:47:10] 2025-10-13 03:46:29,513 | INFO     | intersect: -64132090030.34345
[2025-10-12 23:47:10] 2025-10-13 03:46:29,514 | INFO     | chi2: 1.3735911691837455
[2025-10-12 23:47:10] 2025-10-13 03:46:29,514 | INFO     | current chi2=1.3735911691837455 (change=35.71971058888569 %)
[2025-10-12 23:47:10] 2025-10-13 03:46:29,514 | INFO     | sum of square deviations: 310052325.0
[2025-10-12 23:47:10] 2025-10-13 03:46:29,514 | INFO     | sum of deviations: 12379098562.0
[2025-10-12 23:47:10] 2025-10-13 03:46:29,514 | INFO     | mean x: 1760323543.5
[2025-10-12 23:47:10] 2025-10-13 03:46:29,515 | INFO     | mean y: 2499614.96
[2025-10-12 23:47:10] 2025-10-13 03:46:29,515 | INFO     | -- intersect: -70279891094.4004
[2025-10-12 23:47:10] 2025-10-13 03:46:29,515 | INFO     | intersect: -70279891094.4004
[2025-10-12 23:47:10] 2025-10-13 03:46:29,515 | INFO     | chi2: 1.3763996975030128
[2025-10-12 23:47:10] 2025-10-13 03:46:29,515 | INFO     | current chi2=1.3763996975030128 (change=-0.2044661018704955 %)
[2025-10-12 23:47:10] 2025-10-13 03:46:29,515 | INFO     | right removable region: 99
[2025-10-12 23:47:10] 2025-10-13 03:46:29,515 | INFO     | sum of square deviations: 358927660.0
[2025-10-12 23:47:10] 2025-10-13 03:46:29,516 | INFO     | sum of deviations: -8407946956.0
[2025-10-12 23:47:10] 2025-10-13 03:46:29,516 | INFO     | mean x: 1760324001.0
[2025-10-12 23:47:10] 2025-10-13 03:46:29,516 | INFO     | mean y: 2524211.876190476
[2025-10-12 23:47:10] 2025-10-13 03:46:29,516 | INFO     | -- intersect: 41238440178.2904
[2025-10-12 23:47:10] 2025-10-13 03:46:29,516 | INFO     | intersect: 41238440178.2904
[2025-10-12 23:47:10] 2025-10-13 03:46:29,517 | INFO     | chi2: 0.8422486866482264
[2025-10-12 23:47:10] 2025-10-13 03:46:29,517 | INFO     | current chi2=0.8422486866482264 (change=60.585077606423795 %)
[2025-10-12 23:47:10] 2025-10-13 03:46:29,517 | INFO     | sum of square deviations: 310052325.0
[2025-10-12 23:47:10] 2025-10-13 03:46:29,517 | INFO     | sum of deviations: -6745543968.0
[2025-10-12 23:47:10] 2025-10-13 03:46:29,517 | INFO     | mean x: 1760324153.5
[2025-10-12 23:47:10] 2025-10-13 03:46:29,518 | INFO     | mean y: 2518833.32
[2025-10-12 23:47:10] 2025-10-13 03:46:29,518 | INFO     | -- intersect: 38300389927.71232
[2025-10-12 23:47:10] 2025-10-13 03:46:29,518 | INFO     | intersect: 38300389927.71232
[2025-10-12 23:47:10] 2025-10-13 03:46:29,518 | INFO     | chi2: 0.8210447638136257
[2025-10-12 23:47:10] 2025-10-13 03:46:29,518 | INFO     | current chi2=0.8210447638136257 (change=2.5175370612903953 %)
[2025-10-12 23:47:10] 2025-10-13 03:46:29,518 | INFO     | left removable region: 20
[2025-10-12 23:47:10] 2025-10-13 03:46:29,518 | INFO     | sum of square deviations: 152858680.0
[2025-10-12 23:47:10] 2025-10-13 03:46:29,519 | INFO     | sum of deviations: 667210435.9999998
[2025-10-12 23:47:10] 2025-10-13 03:46:29,519 | INFO     | mean x: 1760324123.0
[2025-10-12 23:47:10] 2025-10-13 03:46:29,519 | INFO     | mean y: 2537683.2025316455
[2025-10-12 23:47:10] 2025-10-13 03:46:29,519 | INFO     | -- intersect: -7681073254.7445135
[2025-10-12 23:47:10] 2025-10-13 03:46:29,519 | INFO     | intersect: -7681073254.7445135
[2025-10-12 23:47:10] 2025-10-13 03:46:29,520 | INFO     | chi2: 0.00012317594189673574
[2025-10-12 23:47:10] 2025-10-13 03:46:29,520 | INFO     | -- intersect: -7681073254.7445135
[2025-10-12 23:47:10] 2025-10-13 03:46:29,520 | INFO     | current memory leak: 4.36 B/s (using 79 data points, chi2=0.00)
[2025-10-12 23:47:10] 2025-10-13 03:46:29,520 | INFO     | could have reported an average CPU frequency of 2102 MHz (7 samples)
[2025-10-12 23:47:10] 2025-10-13 03:46:29,520 | INFO     | ..............................
[2025-10-12 23:47:10] 2025-10-13 03:46:29,520 | INFO     | . Timing measurements:
[2025-10-12 23:47:10] 2025-10-13 03:46:29,520 | INFO     | . get job = 0 s
[2025-10-12 23:47:10] 2025-10-13 03:46:29,521 | INFO     | . initial setup = 2 s
[2025-10-12 23:47:10] 2025-10-13 03:46:29,521 | INFO     | . payload setup = 8 s
[2025-10-12 23:47:10] 2025-10-13 03:46:29,521 | INFO     | . stage-in = 0 s
[2025-10-12 23:47:10] 2025-10-13 03:46:29,521 | INFO     | . payload execution = 6657 s
[2025-10-12 23:47:10] 2025-10-13 03:46:29,521 | INFO     | . stage-out = 1 s
[2025-10-12 23:47:10] 2025-10-13 03:46:29,521 | INFO     | . log creation = 0 s
[2025-10-12 23:47:10] 2025-10-13 03:46:29,521 | INFO     | ..............................
[2025-10-12 23:47:10] 2025-10-13 03:46:29,604 | INFO     | 
[2025-10-12 23:47:10] 2025-10-13 03:46:29,604 | INFO     | job summary report
[2025-10-12 23:47:10] 2025-10-13 03:46:29,605 | INFO     | --------------------------------------------------
[2025-10-12 23:47:10] 2025-10-13 03:46:29,605 | INFO     | PanDA job id: 6840750804
[2025-10-12 23:47:10] 2025-10-13 03:46:29,605 | INFO     | task id: 46676269
[2025-10-12 23:47:10] 2025-10-13 03:46:29,605 | INFO     | errors: (none)
[2025-10-12 23:47:10] 2025-10-13 03:46:29,605 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:47:10] 2025-10-13 03:46:29,605 | INFO     | pilot state: finished 
[2025-10-12 23:47:10] 2025-10-13 03:46:29,606 | INFO     | transexitcode: 0
[2025-10-12 23:47:10] 2025-10-13 03:46:29,606 | INFO     | exeerrorcode: 0
[2025-10-12 23:47:10] 2025-10-13 03:46:29,606 | INFO     | exeerrordiag: 
[2025-10-12 23:47:10] 2025-10-13 03:46:29,606 | INFO     | exitcode: 0
[2025-10-12 23:47:10] 2025-10-13 03:46:29,606 | INFO     | exitmsg: OK
[2025-10-12 23:47:10] 2025-10-13 03:46:29,606 | INFO     | cpuconsumptiontime: 49198 s
[2025-10-12 23:47:10] 2025-10-13 03:46:29,607 | INFO     | nevents: 400
[2025-10-12 23:47:10] 2025-10-13 03:46:29,607 | INFO     | neventsw: 0
[2025-10-12 23:47:10] 2025-10-13 03:46:29,607 | INFO     | pid: 7732
[2025-10-12 23:47:10] 2025-10-13 03:46:29,607 | INFO     | pgrp: 7732
[2025-10-12 23:47:10] 2025-10-13 03:46:29,607 | INFO     | corecount: 8
[2025-10-12 23:47:10] 2025-10-13 03:46:29,607 | INFO     | event service: False
[2025-10-12 23:47:10] 2025-10-13 03:46:29,608 | INFO     | sizes: {0: 2348683, 1: 2348882, 6: 2349144, 11: 2349172, 6668: 2376252, 6669: 2385462, 6679: 2385600}
[2025-10-12 23:47:10] 2025-10-13 03:46:29,608 | INFO     | --------------------------------------------------
[2025-10-12 23:47:10] 2025-10-13 03:46:29,608 | INFO     | 
[2025-10-12 23:47:10] 2025-10-13 03:46:29,608 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 23:47:10] 2025-10-13 03:46:29,637 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:47:10] 2025-10-13 03:46:29,638 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:47:10] 2025-10-13 03:46:29,638 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:47:10] 2025-10-13 03:46:29,638 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:47:10] 2025-10-13 03:46:29,638 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:47:10] 2025-10-13 03:46:29,638 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:47:10] 2025-10-13 03:46:29,639 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:47:10] 2025-10-13 03:46:29,639 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:47:10] 2025-10-13 03:46:29,639 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:47:10] 2025-10-13 03:46:29,639 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:47:10] 2025-10-13 03:46:29,639 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:47:10] 2025-10-13 03:46:29,640 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:47:10] 2025-10-13 03:46:29,640 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:47:10] 2025-10-13 03:46:29,640 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:47:10] 2025-10-13 03:46:29,640 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:47:10] 2025-10-13 03:46:29,640 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:47:10] 2025-10-13 03:46:29,640 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:47:10] 2025-10-13 03:46:29,641 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:47:10] 2025-10-13 03:46:29,641 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:47:10] 2025-10-13 03:46:29,641 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:47:10] 2025-10-13 03:46:29,641 | INFO     | job 6840750804 has completed (purged errors)
[2025-10-12 23:47:10] 2025-10-13 03:46:29,642 | INFO     | overall cleanup function is called
[2025-10-12 23:47:10] 2025-10-13 03:46:30,650 | INFO     | --- collectZombieJob: --- 10, [7732]
[2025-10-12 23:47:10] 2025-10-13 03:46:30,650 | INFO     | zombie collector waiting for pid 7732
[2025-10-12 23:47:10] 2025-10-13 03:46:30,650 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:47:10] 2025-10-13 03:46:30,650 | INFO     | collected zombie processes
[2025-10-12 23:47:10] 2025-10-13 03:46:30,651 | INFO     | will attempt to kill all subprocesses of pid=7732
[2025-10-12 23:47:10] 2025-10-13 03:46:30,738 | INFO     | process IDs to be killed: [7732] (in reverse order)
[2025-10-12 23:47:10] 2025-10-13 03:46:30,793 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:47:10] 2025-10-13 03:46:30,793 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:47:10] 2025-10-13 03:46:30,798 | INFO     | did not find any defunct processes belonging to 7732
[2025-10-12 23:47:10] 2025-10-13 03:46:30,801 | INFO     | did not find any defunct processes belonging to 7732
[2025-10-12 23:47:10] 2025-10-13 03:46:30,801 | INFO     | ready for new job
[2025-10-12 23:47:10] 2025-10-13 03:46:30,801 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:47:10] 2025-10-13 03:46:30,803 | INFO     | ***************************************
[2025-10-12 23:47:10] 2025-10-13 03:46:30,803 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:47:10] 2025-10-13 03:46:30,803 | INFO     | ***************************************
[2025-10-12 23:47:10] 2025-10-13 03:46:30,803 | INFO     | 
[2025-10-12 23:47:10] 2025-10-13 03:46:30,804 | INFO     | architecture information:
[2025-10-12 23:47:10] 2025-10-13 03:46:30,805 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:47:10] 2025-10-13 03:46:30,824 | INFO     | cat /etc/os-release:
[2025-10-12 23:47:10] NAME="CentOS Linux"
[2025-10-12 23:47:10] VERSION="7 (Core)"
[2025-10-12 23:47:10] ID="centos"
[2025-10-12 23:47:10] ID_LIKE="rhel fedora"
[2025-10-12 23:47:10] VERSION_ID="7"
[2025-10-12 23:47:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:47:10] ANSI_COLOR="0;31"
[2025-10-12 23:47:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:47:10] HOME_URL="https://www.centos.org/"
[2025-10-12 23:47:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:47:10] 
[2025-10-12 23:47:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:47:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:47:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:47:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:47:10] 
[2025-10-12 23:47:10] 2025-10-13 03:46:30,825 | INFO     | ***************************************
[2025-10-12 23:47:10] 2025-10-13 03:46:31,328 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 23:47:10] 2025-10-13 03:46:31,349 | INFO     | sufficient remaining disk space (18588106752 B)
[2025-10-12 23:47:10] 2025-10-13 03:46:31,350 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:47:10] 2025-10-13 03:46:31,350 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:47:10] 2025-10-13 03:46:31,350 | INFO     | update_server=False
[2025-10-12 23:47:10] 2025-10-13 03:46:31,350 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:47:10] 2025-10-13 03:46:31,351 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:47:10] 2025-10-13 03:46:31,351 | INFO     | aborting loop
[2025-10-12 23:47:10] 2025-10-13 03:46:31,351 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:47:10] 2025-10-13 03:46:31,352 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:47:10] 2025-10-13 03:46:31,352 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:47:10] 2025-10-13 03:46:32,356 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:47:10] 2025-10-13 03:46:32,356 | INFO     | all payload control threads have been joined
[2025-10-12 23:47:10] 2025-10-13 03:46:32,357 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:47:10] 2025-10-13 03:46:32,358 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:47:10] 2025-10-13 03:46:32,437 | INFO     | all data control threads have been joined
[2025-10-12 23:47:10] 2025-10-13 03:46:32,678 | INFO     | all job control threads have been joined
[2025-10-12 23:47:10] 2025-10-13 03:46:32,942 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:47:10] 2025-10-13 03:46:33,212 | INFO     | [job] validate thread has finished
[2025-10-12 23:47:10] 2025-10-13 03:46:33,250 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:47:10] 2025-10-13 03:46:33,260 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:47:10] 2025-10-13 03:46:33,358 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:47:10] 2025-10-13 03:46:33,362 | INFO     | [payload] control thread has finished
[2025-10-12 23:47:10] 2025-10-13 03:46:33,443 | INFO     | [data] control thread has finished
[2025-10-12 23:47:10] 2025-10-13 03:46:33,479 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:47:10] 2025-10-13 03:46:33,553 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:47:10] 2025-10-13 03:46:33,679 | INFO     | [job] control thread has finished
[2025-10-12 23:47:10] 2025-10-13 03:46:33,844 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:47:10] 2025-10-13 03:46:35,359 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:47:10] 2025-10-13 03:46:42,061 | INFO     | job.realtimelogging is not enabled
[2025-10-12 23:47:10] 2025-10-13 03:46:43,067 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:47:10] 2025-10-13 03:47:00,978 | INFO     | PID=1055 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 23:47:10] 2025-10-13 03:47:00,978 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:47:10] 2025-10-13 03:47:00,978 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:47:10] 2025-10-13 03:47:00,978 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:47:10] 2025-10-13 03:47:04,240 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:47:10] 2025-10-13 03:47:05,411 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140674527827776)>', '<ExcThread(monitor, started 140673617467136)>']
[2025-10-12 23:47:10] 2025-10-13 03:47:05,996 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:47:10] 2025-10-13 03:47:05,996 | INFO     | [monitor] control thread has ended
[2025-10-12 23:47:10] 2025-10-13 03:47:10,437 | INFO     | all workflow threads have been joined
[2025-10-12 23:47:10] 2025-10-13 03:47:10,437 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:47:10] 2025-10-13 03:47:10,437 | INFO     | traces error code: 0
[2025-10-12 23:47:10] 2025-10-13 03:47:10,438 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:47:10] 2025-10-13 03:47:10,550 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:47:10] 2025-10-13 03:47:10,555 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:47:10] 2025-10-13 03:47:10,559 [wrapper] pilotpid: 1055
[2025-10-12 23:47:10] 2025-10-13 03:47:10,564 [wrapper] Pilot exit status: 0
[2025-10-12 23:47:10] 2025-10-13 03:47:10,583 [wrapper] pandaids: 6840750804
[2025-10-12 23:47:10] 2025-10-13 03:47:10,628 [wrapper] cleanup supervisor_pilot 19342 1056
[2025-10-12 23:47:10] 2025-10-13 03:47:10,633 [wrapper] Test setup, not cleaning
[2025-10-12 23:47:10] 2025-10-13 03:47:10,638 [wrapper] apfmon messages muted
[2025-10-12 23:47:10] 2025-10-13 03:47:10,642 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:47:10] 2025-10-13 03:47:10,647 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:47:10]  *** Error codes and diagnostics ***
[2025-10-12 23:47:10]     "exeErrorCode": 0,
[2025-10-12 23:47:10]     "exeErrorDiag": "",
[2025-10-12 23:47:10]     "pilotErrorCode": 0,
[2025-10-12 23:47:10]     "pilotErrorDiag": "",
[2025-10-12 23:47:10]  *** Listing of results directory ***
[2025-10-12 23:47:10] total 411036
[2025-10-12 23:47:10] -rwx------ 1 boincer umatlas     36292 Oct 12 17:31 runpilot2-wrapper.sh
[2025-10-12 23:47:10] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 17:31 queuedata.json
[2025-10-12 23:47:10] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 17:31 pilot3.tar.gz
[2025-10-12 23:47:10] -rw-r--r-- 1 boincer umatlas       100 Oct 12 21:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:47:10] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 21:54 run_atlas
[2025-10-12 23:47:10] -rw-r--r-- 1 boincer umatlas       105 Oct 12 21:54 job.xml
[2025-10-12 23:47:10] -rw-r--r-- 2 boincer umatlas 221200897 Oct 12 21:54 EVNT.46676267._004834.pool.root.1
[2025-10-12 23:47:10] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 21:54 start_atlas.sh
[2025-10-12 23:47:10] drwxrwx--x 2 boincer umatlas      4096 Oct 12 21:54 shared
[2025-10-12 23:47:10] -rw-r--r-- 2 boincer umatlas    569673 Oct 12 21:54 input.tar.gz
[2025-10-12 23:47:10] -rw-r--r-- 1 boincer umatlas         0 Oct 12 21:54 boinc_lockfile
[2025-10-12 23:47:10] -rw-r--r-- 1 boincer umatlas      2548 Oct 12 21:54 pandaJob.out
[2025-10-12 23:47:10] -rw------- 1 boincer umatlas    975595 Oct 12 21:54 agis_schedconf.cvmfs.json
[2025-10-12 23:47:10] -rw------- 1 boincer umatlas   1560580 Oct 12 21:54 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:47:10] drwx------ 5 boincer umatlas      4096 Oct 12 21:54 pilot3
[2025-10-12 23:47:10] -rw-r--r-- 1 boincer umatlas      5910 Oct 12 23:38 init_data.xml
[2025-10-12 23:47:10] -rw------- 1 boincer umatlas 193214624 Oct 12 23:45 HITS.46676269._090023.pool.root.1
[2025-10-12 23:47:10] -rw------- 1 boincer umatlas      1051 Oct 12 23:46 memory_monitor_summary.json
[2025-10-12 23:47:10] -rw-r--r-- 1 boincer umatlas       529 Oct 12 23:46 boinc_task_state.xml
[2025-10-12 23:47:10] -rw------- 1 boincer umatlas    343134 Oct 12 23:46 log.46676269._090023.job.log.tgz.1
[2025-10-12 23:47:10] -rw------- 1 boincer umatlas        95 Oct 12 23:46 pilot_heartbeat.json
[2025-10-12 23:47:10] -rw------- 1 boincer umatlas      7841 Oct 12 23:46 heartbeat.json
[2025-10-12 23:47:10] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 23:46 boinc_mmap_file
[2025-10-12 23:47:10] -rw-r--r-- 1 boincer umatlas        27 Oct 12 23:46 wrapper_checkpoint.txt
[2025-10-12 23:47:10] -rw------- 1 boincer umatlas      4817 Oct 12 23:47 pilotlog.txt
[2025-10-12 23:47:10] -rw------- 1 boincer umatlas    948395 Oct 12 23:47 log.46676269._090023.job.log.1
[2025-10-12 23:47:10] -rw------- 1 boincer umatlas       357 Oct 12 23:47 output.list
[2025-10-12 23:47:10] -rw-r--r-- 1 boincer umatlas       620 Oct 12 23:47 runtime_log
[2025-10-12 23:47:10] -rw------- 1 boincer umatlas   1310720 Oct 12 23:47 result.tar.gz
[2025-10-12 23:47:10] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 23:47 runtime_log.err
[2025-10-12 23:47:10] -rw------- 1 boincer umatlas       659 Oct 12 23:47 fAxNDmbqIS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmu4UMDmoHjNln.diag
[2025-10-12 23:47:10] -rw-r--r-- 1 boincer umatlas     20803 Oct 12 23:47 stderr.txt
[2025-10-12 23:47:10] HITS file was successfully produced:
[2025-10-12 23:47:10] -rw------- 1 boincer umatlas 193214624 Oct 12 23:45 shared/HITS.pool.root.1
[2025-10-12 23:47:10]  *** Contents of shared directory: ***
[2025-10-12 23:47:10] total 406568
[2025-10-12 23:47:10] -rw-r--r-- 2 boincer umatlas 221200897 Oct 12 21:54 ATLAS.root_0
[2025-10-12 23:47:10] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 21:54 start_atlas.sh
[2025-10-12 23:47:10] -rw-r--r-- 2 boincer umatlas    569673 Oct 12 21:54 input.tar.gz
[2025-10-12 23:47:10] -rw------- 1 boincer umatlas 193214624 Oct 12 23:45 HITS.pool.root.1
[2025-10-12 23:47:10] -rw------- 1 boincer umatlas   1310720 Oct 12 23:47 result.tar.gz
23:47:12 (29845): run_atlas exited; CPU time 49213.617032
23:47:12 (29845): called boinc_finish(0)

</stderr_txt>
]]>

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