Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:14 (2999936): wrapper (7.7.26015): starting
00:03:14 (2999936): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 00:03:14] Arguments: --nthreads 12
[2025-10-13 00:03:14] Threads: 12
[2025-10-13 00:03:14] Checking for CVMFS
[2025-10-13 00:03:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:03:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:03:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:03:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:03:16] 2.13.2.0 4001654 130180 479216 151647 2 268 31282251 32935937 19658 16776704 25 244311779 99.587 259865465 22389 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:03:16] CVMFS is ok
[2025-10-13 00:03:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:03:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:03:16] Further information can be found at the LHC@home message board.
[2025-10-13 00:03:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:03:16] Checking for apptainer binary...
[2025-10-13 00:03:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:03:16] Running /usr/bin/apptainer --version
[2025-10-13 00:03:17] apptainer version 1.4.3-1.el9
[2025-10-13 00:03:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:03:18] c7-11-13.aglt2.org
[2025-10-13 00:03:18] apptainer works
[2025-10-13 00:03:18] Set ATHENA_PROC_NUMBER=12
[2025-10-13 00:03:18] Set ATHENA_CORE_NUMBER=12
[2025-10-13 00:03:19] Starting ATLAS job with PandaID=6840750905
[2025-10-13 00:03:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:54:09]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:54:09] 2025-10-13 09:52:56,513 | INFO     | -- intersect: -35074757156.02262
[2025-10-13 05:54:09] 2025-10-13 09:52:56,513 | INFO     | intersect: -35074757156.02262
[2025-10-13 05:54:09] 2025-10-13 09:52:56,514 | INFO     | chi2: 5.065497075014543
[2025-10-13 05:54:09] 2025-10-13 09:52:56,514 | INFO     | current chi2=5.065497075014543 (change=45.53632123427293 %)
[2025-10-13 05:54:09] 2025-10-13 09:52:56,514 | INFO     | sum of square deviations: 10840065321.584091
[2025-10-13 05:54:09] 2025-10-13 09:52:56,565 | INFO     | sum of deviations: 148779083728.27536
[2025-10-13 05:54:09] 2025-10-13 09:52:56,565 | INFO     | mean x: 1760339127.8837922
[2025-10-13 05:54:09] 2025-10-13 09:52:56,565 | INFO     | mean y: 2322322.1651376146
[2025-10-13 05:54:09] 2025-10-13 09:52:56,565 | INFO     | -- intersect: -24158200214.179638
[2025-10-13 05:54:09] 2025-10-13 09:52:56,565 | INFO     | intersect: -24158200214.179638
[2025-10-13 05:54:09] 2025-10-13 09:52:56,566 | INFO     | chi2: 2.870728807166515
[2025-10-13 05:54:09] 2025-10-13 09:52:56,566 | INFO     | current chi2=2.870728807166515 (change=43.32779656854755 %)
[2025-10-13 05:54:09] 2025-10-13 09:52:56,566 | INFO     | sum of square deviations: 10350211070.909967
[2025-10-13 05:54:09] 2025-10-13 09:52:56,591 | INFO     | sum of deviations: 95743672808.83531
[2025-10-13 05:54:09] 2025-10-13 09:52:56,591 | INFO     | mean x: 1760339280.39441
[2025-10-13 05:54:09] 2025-10-13 09:52:56,591 | INFO     | mean y: 2338812.686335404
[2025-10-13 05:54:09] 2025-10-13 09:52:56,591 | INFO     | -- intersect: -16281517327.05181
[2025-10-13 05:54:09] 2025-10-13 09:52:56,591 | INFO     | intersect: -16281517327.05181
[2025-10-13 05:54:09] 2025-10-13 09:52:56,591 | INFO     | chi2: 1.862999878347338
[2025-10-13 05:54:09] 2025-10-13 09:52:56,591 | INFO     | current chi2=1.862999878347338 (change=35.10359203222097 %)
[2025-10-13 05:54:09] 2025-10-13 09:52:56,592 | INFO     | sum of square deviations: 9875353609.968449
[2025-10-13 05:54:09] 2025-10-13 09:52:56,613 | INFO     | sum of deviations: 55213468384.59302
[2025-10-13 05:54:09] 2025-10-13 09:52:56,613 | INFO     | mean x: 1760339432.902208
[2025-10-13 05:54:09] 2025-10-13 09:52:56,613 | INFO     | mean y: 2351822.4384858045
[2025-10-13 05:54:09] 2025-10-13 09:52:56,613 | INFO     | -- intersect: -9839771251.168495
[2025-10-13 05:54:09] 2025-10-13 09:52:56,613 | INFO     | intersect: -9839771251.168495
[2025-10-13 05:54:09] 2025-10-13 09:52:56,614 | INFO     | chi2: 1.2940557381380131
[2025-10-13 05:54:09] 2025-10-13 09:52:56,614 | INFO     | current chi2=1.2940557381380131 (change=30.5391399549652 %)
[2025-10-13 05:54:09] 2025-10-13 09:52:56,614 | INFO     | sum of square deviations: 9415260193.304472
[2025-10-13 05:54:09] 2025-10-13 09:52:56,638 | INFO     | sum of deviations: 24580280540.89745
[2025-10-13 05:54:09] 2025-10-13 09:52:56,639 | INFO     | mean x: 1760339585.4070513
[2025-10-13 05:54:09] 2025-10-13 09:52:56,639 | INFO     | mean y: 2361963.4102564105
[2025-10-13 05:54:09] 2025-10-13 09:52:56,639 | INFO     | -- intersect: -4593330557.899246
[2025-10-13 05:54:09] 2025-10-13 09:52:56,639 | INFO     | intersect: -4593330557.899246
[2025-10-13 05:54:09] 2025-10-13 09:52:56,639 | INFO     | chi2: 0.9569470305431221
[2025-10-13 05:54:09] 2025-10-13 09:52:56,639 | INFO     | current chi2=0.9569470305431221 (change=26.050555448248996 %)
[2025-10-13 05:54:09] 2025-10-13 09:52:56,640 | INFO     | sum of square deviations: 8969829817.009808
[2025-10-13 05:54:09] 2025-10-13 09:52:56,646 | INFO     | sum of deviations: 10445437761.022797
[2025-10-13 05:54:09] 2025-10-13 09:52:56,646 | INFO     | mean x: 1760339737.8859935
[2025-10-13 05:54:09] 2025-10-13 09:52:56,646 | INFO     | mean y: 2366779.4006514656
[2025-10-13 05:54:09] 2025-10-13 09:52:56,646 | INFO     | -- intersect: -2047562767.253001
[2025-10-13 05:54:09] 2025-10-13 09:52:56,646 | INFO     | intersect: -2047562767.253001
[2025-10-13 05:54:09] 2025-10-13 09:52:56,647 | INFO     | chi2: 0.8652850205465621
[2025-10-13 05:54:09] 2025-10-13 09:52:56,647 | INFO     | current chi2=0.8652850205465621 (change=9.578587640795186 %)
[2025-10-13 05:54:09] 2025-10-13 09:52:56,647 | INFO     | left removable region: 60
[2025-10-13 05:54:09] 2025-10-13 09:52:56,647 | INFO     | sum of square deviations: 6169500679.948362
[2025-10-13 05:54:09] 2025-10-13 09:52:56,649 | INFO     | sum of deviations: 27325848111.82289
[2025-10-13 05:54:09] 2025-10-13 09:52:56,649 | INFO     | mean x: 1760340469.8634686
[2025-10-13 05:54:09] 2025-10-13 09:52:56,649 | INFO     | mean y: 2377471.103321033
[2025-10-13 05:54:09] 2025-10-13 09:52:56,649 | INFO     | -- intersect: -7794492778.206175
[2025-10-13 05:54:09] 2025-10-13 09:52:56,649 | INFO     | intersect: -7794492778.206175
[2025-10-13 05:54:09] 2025-10-13 09:52:56,654 | INFO     | chi2: 0.10752520872786622
[2025-10-13 05:54:09] 2025-10-13 09:52:56,654 | INFO     | -- intersect: -7794492778.206175
[2025-10-13 05:54:09] 2025-10-13 09:52:56,654 | INFO     | current memory leak: 4.43 B/s (using 271 data points, chi2=0.11)
[2025-10-13 05:54:09] 2025-10-13 09:52:56,654 | INFO     | could have reported an average CPU frequency of 3278 MHz (15 samples)
[2025-10-13 05:54:09] 2025-10-13 09:52:56,655 | INFO     | ..............................
[2025-10-13 05:54:09] 2025-10-13 09:52:56,655 | INFO     | . Timing measurements:
[2025-10-13 05:54:09] 2025-10-13 09:52:56,655 | INFO     | . get job = 1 s
[2025-10-13 05:54:09] 2025-10-13 09:52:56,655 | INFO     | . initial setup = 10 s
[2025-10-13 05:54:09] 2025-10-13 09:52:56,655 | INFO     | . payload setup = 64 s
[2025-10-13 05:54:09] 2025-10-13 09:52:56,655 | INFO     | . stage-in = 0 s
[2025-10-13 05:54:09] 2025-10-13 09:52:56,655 | INFO     | . payload execution = 20617 s
[2025-10-13 05:54:09] 2025-10-13 09:52:56,655 | INFO     | . stage-out = 5 s
[2025-10-13 05:54:09] 2025-10-13 09:52:56,655 | INFO     | . log creation = 0 s
[2025-10-13 05:54:09] 2025-10-13 09:52:56,655 | INFO     | ..............................
[2025-10-13 05:54:09] 2025-10-13 09:52:57,031 | INFO     | 
[2025-10-13 05:54:09] 2025-10-13 09:52:57,032 | INFO     | job summary report
[2025-10-13 05:54:09] 2025-10-13 09:52:57,032 | INFO     | --------------------------------------------------
[2025-10-13 05:54:09] 2025-10-13 09:52:57,032 | INFO     | PanDA job id: 6840750905
[2025-10-13 05:54:09] 2025-10-13 09:52:57,032 | INFO     | task id: 46676269
[2025-10-13 05:54:09] 2025-10-13 09:52:57,032 | INFO     | errors: (none)
[2025-10-13 05:54:09] 2025-10-13 09:52:57,032 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:54:09] 2025-10-13 09:52:57,032 | INFO     | pilot state: finished 
[2025-10-13 05:54:09] 2025-10-13 09:52:57,032 | INFO     | transexitcode: 0
[2025-10-13 05:54:09] 2025-10-13 09:52:57,032 | INFO     | exeerrorcode: 0
[2025-10-13 05:54:09] 2025-10-13 09:52:57,032 | INFO     | exeerrordiag: 
[2025-10-13 05:54:09] 2025-10-13 09:52:57,032 | INFO     | exitcode: 0
[2025-10-13 05:54:09] 2025-10-13 09:52:57,033 | INFO     | exitmsg: OK
[2025-10-13 05:54:09] 2025-10-13 09:52:57,033 | INFO     | cpuconsumptiontime: 33612 s
[2025-10-13 05:54:09] 2025-10-13 09:52:57,033 | INFO     | nevents: 400
[2025-10-13 05:54:09] 2025-10-13 09:52:57,033 | INFO     | neventsw: 0
[2025-10-13 05:54:09] 2025-10-13 09:52:57,033 | INFO     | pid: 3025106
[2025-10-13 05:54:09] 2025-10-13 09:52:57,033 | INFO     | pgrp: 3025106
[2025-10-13 05:54:09] 2025-10-13 09:52:57,033 | INFO     | corecount: 12
[2025-10-13 05:54:09] 2025-10-13 09:52:57,033 | INFO     | event service: False
[2025-10-13 05:54:09] 2025-10-13 09:52:57,033 | INFO     | sizes: {0: 2348686, 1: 2348686, 2: 2348714, 3: 2348941, 14: 2348941, 26: 2348969, 36: 2349125, 48: 2349153, 52: 2349443, 59: 2349471, 20686: 2382897, 20687: 238317
[2025-10-13 05:54:09] 2025-10-13 09:52:57,033 | INFO     | --------------------------------------------------
[2025-10-13 05:54:09] 2025-10-13 09:52:57,033 | INFO     | 
[2025-10-13 05:54:09] 2025-10-13 09:52:57,060 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-13 05:54:09] 2025-10-13 09:52:57,204 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:54:09] 2025-10-13 09:52:57,204 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:54:09] 2025-10-13 09:52:57,204 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:54:09] 2025-10-13 09:52:57,204 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:54:09] 2025-10-13 09:52:57,204 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:54:09] 2025-10-13 09:52:57,204 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:54:09] 2025-10-13 09:52:57,204 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:54:09] 2025-10-13 09:52:57,204 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:54:09] 2025-10-13 09:52:57,204 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:54:09] 2025-10-13 09:52:57,204 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:54:09] 2025-10-13 09:52:57,205 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:54:09] 2025-10-13 09:52:57,205 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:54:09] 2025-10-13 09:52:57,205 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:54:09] 2025-10-13 09:52:57,205 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:54:09] 2025-10-13 09:52:57,205 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:54:09] 2025-10-13 09:52:57,205 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:54:09] 2025-10-13 09:52:57,205 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:54:09] 2025-10-13 09:52:57,205 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:54:09] 2025-10-13 09:52:57,205 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:54:09] 2025-10-13 09:52:57,205 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:54:09] 2025-10-13 09:52:57,205 | INFO     | job 6840750905 has completed (purged errors)
[2025-10-13 05:54:09] 2025-10-13 09:52:57,205 | INFO     | overall cleanup function is called
[2025-10-13 05:54:09] 2025-10-13 09:52:58,226 | INFO     | --- collectZombieJob: --- 10, [3025106]
[2025-10-13 05:54:09] 2025-10-13 09:52:58,226 | INFO     | zombie collector waiting for pid 3025106
[2025-10-13 05:54:09] 2025-10-13 09:52:58,226 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:54:09] 2025-10-13 09:52:58,226 | INFO     | collected zombie processes
[2025-10-13 05:54:09] 2025-10-13 09:52:58,226 | INFO     | will attempt to kill all subprocesses of pid=3025106
[2025-10-13 05:54:09] 2025-10-13 09:52:59,968 | INFO     | process IDs to be killed: [3025106] (in reverse order)
[2025-10-13 05:54:09] 2025-10-13 09:53:00,684 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:54:09] 2025-10-13 09:53:00,684 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:54:09] 2025-10-13 09:53:00,949 | INFO     | did not find any defunct processes belonging to 3025106
[2025-10-13 05:54:09] 2025-10-13 09:53:00,980 | INFO     | did not find any defunct processes belonging to 3025106
[2025-10-13 05:54:09] 2025-10-13 09:53:00,981 | INFO     | ready for new job
[2025-10-13 05:54:09] 2025-10-13 09:53:00,981 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:54:09] 2025-10-13 09:53:00,988 | INFO     | ***************************************
[2025-10-13 05:54:09] 2025-10-13 09:53:00,988 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:54:09] 2025-10-13 09:53:00,988 | INFO     | ***************************************
[2025-10-13 05:54:09] 2025-10-13 09:53:00,988 | INFO     | 
[2025-10-13 05:54:09] 2025-10-13 09:53:01,010 | INFO     | architecture information:
[2025-10-13 05:54:09] 2025-10-13 09:53:01,022 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:54:09] 2025-10-13 09:53:01,232 | INFO     | cat /etc/os-release:
[2025-10-13 05:54:09] NAME="CentOS Linux"
[2025-10-13 05:54:09] VERSION="7 (Core)"
[2025-10-13 05:54:09] ID="centos"
[2025-10-13 05:54:09] ID_LIKE="rhel fedora"
[2025-10-13 05:54:09] VERSION_ID="7"
[2025-10-13 05:54:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:54:09] ANSI_COLOR="0;31"
[2025-10-13 05:54:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:54:09] HOME_URL="https://www.centos.org/"
[2025-10-13 05:54:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:54:09] 
[2025-10-13 05:54:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:54:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:54:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:54:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:54:09] 
[2025-10-13 05:54:09] 2025-10-13 09:53:01,232 | INFO     | ***************************************
[2025-10-13 05:54:09] 2025-10-13 09:53:01,741 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-13 05:54:09] 2025-10-13 09:53:01,952 | INFO     | sufficient remaining disk space (95012519936 B)
[2025-10-13 05:54:09] 2025-10-13 09:53:01,952 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:54:09] 2025-10-13 09:53:01,952 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:54:09] 2025-10-13 09:53:01,953 | INFO     | update_server=False
[2025-10-13 05:54:09] 2025-10-13 09:53:01,953 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:54:09] 2025-10-13 09:53:01,954 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:54:09] 2025-10-13 09:53:02,067 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:54:09] 2025-10-13 09:53:02,222 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:54:09] 2025-10-13 09:53:02,222 | INFO     | aborting loop
[2025-10-13 05:54:09] 2025-10-13 09:53:02,551 | INFO     | all job control threads have been joined
[2025-10-13 05:54:09] 2025-10-13 09:53:02,587 | INFO     | all data control threads have been joined
[2025-10-13 05:54:09] 2025-10-13 09:53:02,962 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:54:09] 2025-10-13 09:53:03,073 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:54:09] 2025-10-13 09:53:03,086 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:54:09] 2025-10-13 09:53:03,247 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:54:09] 2025-10-13 09:53:03,404 | INFO     | all payload control threads have been joined
[2025-10-13 05:54:09] 2025-10-13 09:53:03,561 | INFO     | [job] control thread has finished
[2025-10-13 05:54:09] 2025-10-13 09:53:03,593 | INFO     | [data] control thread has finished
[2025-10-13 05:54:09] 2025-10-13 09:53:03,644 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:54:09] 2025-10-13 09:53:03,694 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:54:09] 2025-10-13 09:53:03,701 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:54:09] 2025-10-13 09:53:03,965 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:54:09] 2025-10-13 09:53:04,106 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:54:09] 2025-10-13 09:53:04,159 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:54:09] 2025-10-13 09:53:04,255 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:54:09] 2025-10-13 09:53:04,339 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:54:09] 2025-10-13 09:53:04,387 | INFO     | [job] validate thread has finished
[2025-10-13 05:54:09] 2025-10-13 09:53:04,411 | INFO     | [payload] control thread has finished
[2025-10-13 05:54:09] 2025-10-13 09:53:08,223 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:54:09] 2025-10-13 09:53:29,669 | INFO     | PID=3006720 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 05:54:09] 2025-10-13 09:53:29,669 | INFO     | .. there are 21 such processes running
[2025-10-13 05:54:09] 2025-10-13 09:53:29,670 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:54:09] 2025-10-13 09:53:29,670 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:54:09] 2025-10-13 09:53:29,670 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:54:09] 2025-10-13 09:54:00,648 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:54:09] 2025-10-13 09:54:01,164 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140058757580608)>', '<ExcThread(monitor, started 140058271147776)>']
[2025-10-13 05:54:09] 2025-10-13 09:54:01,939 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:54:09] 2025-10-13 09:54:01,939 | INFO     | [monitor] control thread has ended
[2025-10-13 05:54:09] 2025-10-13 09:54:06,201 | INFO     | all workflow threads have been joined
[2025-10-13 05:54:09] 2025-10-13 09:54:06,201 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:54:09] 2025-10-13 09:54:06,201 | INFO     | traces error code: 0
[2025-10-13 05:54:09] 2025-10-13 09:54:06,201 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:54:09] 2025-10-13 09:54:07,576 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:54:09] 2025-10-13 09:54:07,609 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:54:09] 2025-10-13 09:54:07,631 [wrapper] pilotpid: 3006720
[2025-10-13 05:54:09] 2025-10-13 09:54:07,672 [wrapper] Pilot exit status: 0
[2025-10-13 05:54:09] 2025-10-13 09:54:07,809 [wrapper] pandaids: 6840750905
[2025-10-13 05:54:09] 2025-10-13 09:54:08,142 [wrapper] cleanup supervisor_pilot 3965949 3006721
[2025-10-13 05:54:09] 2025-10-13 09:54:08,188 [wrapper] Test setup, not cleaning
[2025-10-13 05:54:09] 2025-10-13 09:54:08,252 [wrapper] apfmon messages muted
[2025-10-13 05:54:09] 2025-10-13 09:54:08,319 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:54:09] 2025-10-13 09:54:08,368 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:54:09]  *** Error codes and diagnostics ***
[2025-10-13 05:54:09]     "exeErrorCode": 0,
[2025-10-13 05:54:09]     "exeErrorDiag": "",
[2025-10-13 05:54:09]     "pilotErrorCode": 0,
[2025-10-13 05:54:09]     "pilotErrorDiag": "",
[2025-10-13 05:54:09]  *** Listing of results directory ***
[2025-10-13 05:54:09] total 419492
[2025-10-13 05:54:09] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 17:31 pilot3.tar.gz
[2025-10-13 05:54:09] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 17:36 queuedata.json
[2025-10-13 05:54:09] -rwx------. 1 boincer umatlas     36292 Oct 12 17:37 runpilot2-wrapper.sh
[2025-10-13 05:54:09] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:54:09] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:03 run_atlas
[2025-10-13 05:54:09] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:03 job.xml
[2025-10-13 05:54:09] -rw-r--r--. 2 boincer umatlas 221912436 Oct 13 00:03 EVNT.46676267._004838.pool.root.1
[2025-10-13 05:54:09] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 00:03 input.tar.gz
[2025-10-13 05:54:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:03 start_atlas.sh
[2025-10-13 05:54:09] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:03 shared
[2025-10-13 05:54:09] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:03 boinc_lockfile
[2025-10-13 05:54:09] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:03 pandaJob.out
[2025-10-13 05:54:09] -rw-------. 1 boincer umatlas    974373 Oct 13 00:05 agis_schedconf.cvmfs.json
[2025-10-13 05:54:09] drwx------. 5 boincer umatlas      4096 Oct 13 00:05 pilot3
[2025-10-13 05:54:09] -rw-r--r--. 1 boincer umatlas      6899 Oct 13 05:46 init_data.xml
[2025-10-13 05:54:09] -rw-------. 1 boincer umatlas 197585223 Oct 13 05:50 HITS.46676269._090124.pool.root.1
[2025-10-13 05:54:09] -rw-r--r--. 1 boincer umatlas       531 Oct 13 05:50 boinc_task_state.xml
[2025-10-13 05:54:09] -rw-------. 1 boincer umatlas      1061 Oct 13 05:52 memory_monitor_summary.json
[2025-10-13 05:54:09] -rw-------. 1 boincer umatlas   1560580 Oct 13 05:52 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:54:09] -rw-------. 1 boincer umatlas    585994 Oct 13 05:52 log.46676269._090124.job.log.tgz.1
[2025-10-13 05:54:09] -rw-------. 1 boincer umatlas      7804 Oct 13 05:52 heartbeat.json
[2025-10-13 05:54:09] -rw-------. 1 boincer umatlas        95 Oct 13 05:53 pilot_heartbeat.json
[2025-10-13 05:54:09] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 05:54 boinc_mmap_file
[2025-10-13 05:54:09] -rw-r--r--. 1 boincer umatlas        28 Oct 13 05:54 wrapper_checkpoint.txt
[2025-10-13 05:54:09] -rw-------. 1 boincer umatlas      4824 Oct 13 05:54 pilotlog.txt
[2025-10-13 05:54:09] -rw-------. 1 boincer umatlas   2493826 Oct 13 05:54 log.46676269._090124.job.log.1
[2025-10-13 05:54:09] -rw-------. 1 boincer umatlas       357 Oct 13 05:54 output.list
[2025-10-13 05:54:09] -rw-r--r--. 1 boincer umatlas       620 Oct 13 05:54 runtime_log
[2025-10-13 05:54:09] -rw-------. 1 boincer umatlas   3102720 Oct 13 05:54 result.tar.gz
[2025-10-13 05:54:09] -rw-r--r--. 1 boincer umatlas      8706 Oct 13 05:54 runtime_log.err
[2025-10-13 05:54:09] -rw-------. 1 boincer umatlas       660 Oct 13 05:54 LrjMDmbvIS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmpilNDmKZWI6m.diag
[2025-10-13 05:54:09] -rw-r--r--. 1 boincer umatlas     21066 Oct 13 05:54 stderr.txt
[2025-10-13 05:54:09] HITS file was successfully produced:
[2025-10-13 05:54:09] -rw-------. 1 boincer umatlas 197585223 Oct 13 05:50 shared/HITS.pool.root.1
[2025-10-13 05:54:09]  *** Contents of shared directory: ***
[2025-10-13 05:54:09] total 413280
[2025-10-13 05:54:09] -rw-r--r--. 2 boincer umatlas 221912436 Oct 13 00:03 ATLAS.root_0
[2025-10-13 05:54:09] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 00:03 input.tar.gz
[2025-10-13 05:54:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:03 start_atlas.sh
[2025-10-13 05:54:09] -rw-------. 1 boincer umatlas 197585223 Oct 13 05:50 HITS.pool.root.1
[2025-10-13 05:54:09] -rw-------. 1 boincer umatlas   3102720 Oct 13 05:54 result.tar.gz
05:54:10 (2999936): run_atlas exited; CPU time 33982.053534
05:54:10 (2999936): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN