Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:51:21 (6919): wrapper (7.7.26015): starting
21:51:21 (6919): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 21:51:21] Arguments: --nthreads 8
[2025-10-12 21:51:21] Threads: 8
[2025-10-12 21:51:21] Checking for CVMFS
[2025-10-12 21:51:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 21:51:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 21:51:22] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 21:51:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 21:51:22] 2.11.2.0 2885 206586 77220 151643 0 57 12972962 20275201 1 130560 1 74137569 99.978 10537287 9988 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 21:51:22] CVMFS is ok
[2025-10-12 21:51:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 21:51:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 21:51:22] Further information can be found at the LHC@home message board.
[2025-10-12 21:51:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:51:22] Checking for apptainer binary...
[2025-10-12 21:51:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 21:51:22] Running /usr/bin/apptainer --version
[2025-10-12 21:51:22] apptainer version 1.3.2-1.el7
[2025-10-12 21:51:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:51:23] c-204-6.aglt2.org
[2025-10-12 21:51:23] apptainer works
[2025-10-12 21:51:24] Set ATHENA_PROC_NUMBER=8
[2025-10-12 21:51:24] Set ATHENA_CORE_NUMBER=8
[2025-10-12 21:51:24] Starting ATLAS job with PandaID=6840749902
[2025-10-12 21:51:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:57:59]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:57:59] 2025-10-13 03:56:56,186 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 23:57:59] 2025-10-13 03:56:56,186 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 23:57:59] 2025-10-13 03:56:56,187 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 23:57:59] 2025-10-13 03:56:56,187 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:57:59] 2025-10-13 03:56:56,189 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:57:59] 2025-10-13 03:56:56,190 | INFO     | sum of square deviations: 576985702.0
[2025-10-12 23:57:59] 2025-10-13 03:56:56,190 | INFO     | sum of deviations: 5833878898.999997
[2025-10-12 23:57:59] 2025-10-13 03:56:56,190 | INFO     | mean x: 1760324055.0
[2025-10-12 23:57:59] 2025-10-13 03:56:56,190 | INFO     | mean y: 2459867.211382114
[2025-10-12 23:57:59] 2025-10-13 03:56:56,191 | INFO     | -- intersect: -17796104853.31719
[2025-10-12 23:57:59] 2025-10-13 03:56:56,191 | INFO     | intersect: -17796104853.31719
[2025-10-12 23:57:59] 2025-10-13 03:56:56,191 | INFO     | chi2: 2.245433401891444
[2025-10-12 23:57:59] 2025-10-13 03:56:56,191 | INFO     | sum of square deviations: 509440249.5
[2025-10-12 23:57:59] 2025-10-13 03:56:56,192 | INFO     | sum of deviations: 13836783049.0
[2025-10-12 23:57:59] 2025-10-13 03:56:56,192 | INFO     | mean x: 1760323902.5
[2025-10-12 23:57:59] 2025-10-13 03:56:56,192 | INFO     | mean y: 2477303.1016949154
[2025-10-12 23:57:59] 2025-10-13 03:56:56,192 | INFO     | -- intersect: -47809253235.989784
[2025-10-12 23:57:59] 2025-10-13 03:56:56,192 | INFO     | intersect: -47809253235.989784
[2025-10-12 23:57:59] 2025-10-13 03:56:56,193 | INFO     | chi2: 1.3996294236408202
[2025-10-12 23:57:59] 2025-10-13 03:56:56,193 | INFO     | current chi2=1.3996294236408202 (change=37.66773833230411 %)
[2025-10-12 23:57:59] 2025-10-13 03:56:56,193 | INFO     | sum of square deviations: 447383272.0
[2025-10-12 23:57:59] 2025-10-13 03:56:56,194 | INFO     | sum of deviations: 13164650706.0
[2025-10-12 23:57:59] 2025-10-13 03:56:56,194 | INFO     | mean x: 1760323750.0
[2025-10-12 23:57:59] 2025-10-13 03:56:56,194 | INFO     | mean y: 2475650.407079646
[2025-10-12 23:57:59] 2025-10-13 03:56:56,194 | INFO     | -- intersect: -51796616422.54389
[2025-10-12 23:57:59] 2025-10-13 03:56:56,194 | INFO     | intersect: -51796616422.54389
[2025-10-12 23:57:59] 2025-10-13 03:56:56,194 | INFO     | chi2: 1.4021671072279978
[2025-10-12 23:57:59] 2025-10-13 03:56:56,194 | INFO     | current chi2=1.4021671072279978 (change=-0.18131110594805375 %)
[2025-10-12 23:57:59] 2025-10-13 03:56:56,195 | INFO     | right removable region: 112
[2025-10-12 23:57:59] 2025-10-13 03:56:56,195 | INFO     | sum of square deviations: 509440249.5
[2025-10-12 23:57:59] 2025-10-13 03:56:56,195 | INFO     | sum of deviations: -10855294162.0
[2025-10-12 23:57:59] 2025-10-13 03:56:56,196 | INFO     | mean x: 1760324207.5
[2025-10-12 23:57:59] 2025-10-13 03:56:56,196 | INFO     | mean y: 2496775.7288135593
[2025-10-12 23:57:59] 2025-10-13 03:56:56,196 | INFO     | -- intersect: 37511973327.01577
[2025-10-12 23:57:59] 2025-10-13 03:56:56,196 | INFO     | intersect: 37511973327.01577
[2025-10-12 23:57:59] 2025-10-13 03:56:56,196 | INFO     | chi2: 0.9346242194414471
[2025-10-12 23:57:59] 2025-10-13 03:56:56,196 | INFO     | current chi2=0.9346242194414471 (change=58.37666712118181 %)
[2025-10-12 23:57:59] 2025-10-13 03:56:56,197 | INFO     | sum of square deviations: 447383272.0
[2025-10-12 23:57:59] 2025-10-13 03:56:56,197 | INFO     | sum of deviations: -7116293916.0
[2025-10-12 23:57:59] 2025-10-13 03:56:56,197 | INFO     | mean x: 1760324360.0
[2025-10-12 23:57:59] 2025-10-13 03:56:56,197 | INFO     | mean y: 2487533.3628318585
[2025-10-12 23:57:59] 2025-10-13 03:56:56,197 | INFO     | -- intersect: 28003055094.26751
[2025-10-12 23:57:59] 2025-10-13 03:56:56,198 | INFO     | intersect: 28003055094.26751
[2025-10-12 23:57:59] 2025-10-13 03:56:56,198 | INFO     | chi2: 0.9076774696584743
[2025-10-12 23:57:59] 2025-10-13 03:56:56,198 | INFO     | current chi2=0.9076774696584743 (change=2.8831640805410372 %)
[2025-10-12 23:57:59] 2025-10-13 03:56:56,198 | INFO     | left removable region: 20
[2025-10-12 23:57:59] 2025-10-13 03:56:56,198 | INFO     | sum of square deviations: 241429643.0
[2025-10-12 23:57:59] 2025-10-13 03:56:56,199 | INFO     | sum of deviations: 1499345870.5
[2025-10-12 23:57:59] 2025-10-13 03:56:56,199 | INFO     | mean x: 1760324329.5
[2025-10-12 23:57:59] 2025-10-13 03:56:56,199 | INFO     | mean y: 2504761.836956522
[2025-10-12 23:57:59] 2025-10-13 03:56:56,199 | INFO     | -- intersect: -10929603579.873621
[2025-10-12 23:57:59] 2025-10-13 03:56:56,199 | INFO     | intersect: -10929603579.873621
[2025-10-12 23:57:59] 2025-10-13 03:56:56,199 | INFO     | chi2: 0.0003061021733279814
[2025-10-12 23:57:59] 2025-10-13 03:56:56,200 | INFO     | -- intersect: -10929603579.873621
[2025-10-12 23:57:59] 2025-10-13 03:56:56,200 | INFO     | current memory leak: 6.21 B/s (using 92 data points, chi2=0.00)
[2025-10-12 23:57:59] 2025-10-13 03:56:56,200 | INFO     | could have reported an average CPU frequency of 1951 MHz (8 samples)
[2025-10-12 23:57:59] 2025-10-13 03:56:56,200 | INFO     | ..............................
[2025-10-12 23:57:59] 2025-10-13 03:56:56,200 | INFO     | . Timing measurements:
[2025-10-12 23:57:59] 2025-10-13 03:56:56,200 | INFO     | . get job = 0 s
[2025-10-12 23:57:59] 2025-10-13 03:56:56,201 | INFO     | . initial setup = 2 s
[2025-10-12 23:57:59] 2025-10-13 03:56:56,201 | INFO     | . payload setup = 8 s
[2025-10-12 23:57:59] 2025-10-13 03:56:56,201 | INFO     | . stage-in = 0 s
[2025-10-12 23:57:59] 2025-10-13 03:56:56,201 | INFO     | . payload execution = 7474 s
[2025-10-12 23:57:59] 2025-10-13 03:56:56,201 | INFO     | . stage-out = 0 s
[2025-10-12 23:57:59] 2025-10-13 03:56:56,201 | INFO     | . log creation = 0 s
[2025-10-12 23:57:59] 2025-10-13 03:56:56,201 | INFO     | ..............................
[2025-10-12 23:57:59] 2025-10-13 03:56:56,780 | INFO     | 
[2025-10-12 23:57:59] 2025-10-13 03:56:56,780 | INFO     | job summary report
[2025-10-12 23:57:59] 2025-10-13 03:56:56,781 | INFO     | --------------------------------------------------
[2025-10-12 23:57:59] 2025-10-13 03:56:56,781 | INFO     | PanDA job id: 6840749902
[2025-10-12 23:57:59] 2025-10-13 03:56:56,781 | INFO     | task id: 46676269
[2025-10-12 23:57:59] 2025-10-13 03:56:56,781 | INFO     | errors: (none)
[2025-10-12 23:57:59] 2025-10-13 03:56:56,781 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:57:59] 2025-10-13 03:56:56,781 | INFO     | pilot state: finished 
[2025-10-12 23:57:59] 2025-10-13 03:56:56,782 | INFO     | transexitcode: 0
[2025-10-12 23:57:59] 2025-10-13 03:56:56,782 | INFO     | exeerrorcode: 0
[2025-10-12 23:57:59] 2025-10-13 03:56:56,782 | INFO     | exeerrordiag: 
[2025-10-12 23:57:59] 2025-10-13 03:56:56,782 | INFO     | exitcode: 0
[2025-10-12 23:57:59] 2025-10-13 03:56:56,782 | INFO     | exitmsg: OK
[2025-10-12 23:57:59] 2025-10-13 03:56:56,782 | INFO     | cpuconsumptiontime: 55843 s
[2025-10-12 23:57:59] 2025-10-13 03:56:56,782 | INFO     | nevents: 400
[2025-10-12 23:57:59] 2025-10-13 03:56:56,783 | INFO     | neventsw: 0
[2025-10-12 23:57:59] 2025-10-13 03:56:56,783 | INFO     | pid: 17122
[2025-10-12 23:57:59] 2025-10-13 03:56:56,783 | INFO     | pgrp: 17122
[2025-10-12 23:57:59] 2025-10-13 03:56:56,783 | INFO     | corecount: 8
[2025-10-12 23:57:59] 2025-10-13 03:56:56,783 | INFO     | event service: False
[2025-10-12 23:57:59] 2025-10-13 03:56:56,783 | INFO     | sizes: {0: 2348686, 1: 2348885, 7: 2349147, 11: 2349175, 7486: 2376564, 7488: 2385562, 7490: 2385746, 7496: 2385940}
[2025-10-12 23:57:59] 2025-10-13 03:56:56,783 | INFO     | --------------------------------------------------
[2025-10-12 23:57:59] 2025-10-13 03:56:56,783 | INFO     | 
[2025-10-12 23:57:59] 2025-10-13 03:56:56,784 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 23:57:59] 2025-10-13 03:56:56,814 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:57:59] 2025-10-13 03:56:56,814 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:57:59] 2025-10-13 03:56:56,815 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:57:59] 2025-10-13 03:56:56,815 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:57:59] 2025-10-13 03:56:56,815 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:57:59] 2025-10-13 03:56:56,815 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:57:59] 2025-10-13 03:56:56,815 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:57:59] 2025-10-13 03:56:56,815 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:57:59] 2025-10-13 03:56:56,816 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:57:59] 2025-10-13 03:56:56,816 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:57:59] 2025-10-13 03:56:56,816 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:57:59] 2025-10-13 03:56:56,816 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:57:59] 2025-10-13 03:56:56,816 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:57:59] 2025-10-13 03:56:56,816 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:57:59] 2025-10-13 03:56:56,817 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:57:59] 2025-10-13 03:56:56,817 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:57:59] 2025-10-13 03:56:56,817 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:57:59] 2025-10-13 03:56:56,817 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:57:59] 2025-10-13 03:56:56,817 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:57:59] 2025-10-13 03:56:56,817 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:57:59] 2025-10-13 03:56:56,818 | INFO     | job 6840749902 has completed (purged errors)
[2025-10-12 23:57:59] 2025-10-13 03:56:56,818 | INFO     | overall cleanup function is called
[2025-10-12 23:57:59] 2025-10-13 03:56:57,826 | INFO     | --- collectZombieJob: --- 10, [17122]
[2025-10-12 23:57:59] 2025-10-13 03:56:57,826 | INFO     | zombie collector waiting for pid 17122
[2025-10-12 23:57:59] 2025-10-13 03:56:57,827 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:57:59] 2025-10-13 03:56:57,827 | INFO     | collected zombie processes
[2025-10-12 23:57:59] 2025-10-13 03:56:57,827 | INFO     | will attempt to kill all subprocesses of pid=17122
[2025-10-12 23:57:59] 2025-10-13 03:56:57,917 | INFO     | process IDs to be killed: [17122] (in reverse order)
[2025-10-12 23:57:59] 2025-10-13 03:56:57,974 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:57:59] 2025-10-13 03:56:57,975 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:57:59] 2025-10-13 03:56:57,979 | INFO     | did not find any defunct processes belonging to 17122
[2025-10-12 23:57:59] 2025-10-13 03:56:57,983 | INFO     | did not find any defunct processes belonging to 17122
[2025-10-12 23:57:59] 2025-10-13 03:56:57,983 | INFO     | ready for new job
[2025-10-12 23:57:59] 2025-10-13 03:56:57,984 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:57:59] 2025-10-13 03:56:57,985 | INFO     | ***************************************
[2025-10-12 23:57:59] 2025-10-13 03:56:57,985 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:57:59] 2025-10-13 03:56:57,986 | INFO     | ***************************************
[2025-10-12 23:57:59] 2025-10-13 03:56:57,986 | INFO     | 
[2025-10-12 23:57:59] 2025-10-13 03:56:57,986 | INFO     | architecture information:
[2025-10-12 23:57:59] 2025-10-13 03:56:57,987 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:57:59] 2025-10-13 03:56:58,006 | INFO     | cat /etc/os-release:
[2025-10-12 23:57:59] NAME="CentOS Linux"
[2025-10-12 23:57:59] VERSION="7 (Core)"
[2025-10-12 23:57:59] ID="centos"
[2025-10-12 23:57:59] ID_LIKE="rhel fedora"
[2025-10-12 23:57:59] VERSION_ID="7"
[2025-10-12 23:57:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:57:59] ANSI_COLOR="0;31"
[2025-10-12 23:57:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:57:59] HOME_URL="https://www.centos.org/"
[2025-10-12 23:57:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:57:59] 
[2025-10-12 23:57:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:57:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:57:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:57:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:57:59] 
[2025-10-12 23:57:59] 2025-10-13 03:56:58,007 | INFO     | ***************************************
[2025-10-12 23:57:59] 2025-10-13 03:56:58,510 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 23:57:59] 2025-10-13 03:56:58,532 | INFO     | sufficient remaining disk space (18590203904 B)
[2025-10-12 23:57:59] 2025-10-13 03:56:58,533 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:57:59] 2025-10-13 03:56:58,533 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:57:59] 2025-10-13 03:56:58,533 | INFO     | update_server=False
[2025-10-12 23:57:59] 2025-10-13 03:56:58,533 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:57:59] 2025-10-13 03:56:58,534 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:57:59] 2025-10-13 03:56:58,535 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:57:59] 2025-10-13 03:56:58,535 | INFO     | aborting loop
[2025-10-12 23:57:59] 2025-10-13 03:56:58,619 | INFO     | all job control threads have been joined
[2025-10-12 23:57:59] 2025-10-13 03:56:59,031 | INFO     | all payload control threads have been joined
[2025-10-12 23:57:59] 2025-10-13 03:56:59,105 | INFO     | all data control threads have been joined
[2025-10-12 23:57:59] 2025-10-13 03:56:59,539 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:57:59] 2025-10-13 03:56:59,540 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:57:59] 2025-10-13 03:56:59,592 | INFO     | [job] validate thread has finished
[2025-10-12 23:57:59] 2025-10-13 03:56:59,625 | INFO     | [job] control thread has finished
[2025-10-12 23:57:59] 2025-10-13 03:56:59,664 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:57:59] 2025-10-13 03:56:59,752 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:57:59] 2025-10-13 03:57:00,033 | INFO     | [payload] control thread has finished
[2025-10-12 23:57:59] 2025-10-13 03:57:00,100 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:57:59] 2025-10-13 03:57:00,102 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:57:59] 2025-10-13 03:57:00,107 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:57:59] 2025-10-13 03:57:00,111 | INFO     | [data] control thread has finished
[2025-10-12 23:57:59] 2025-10-13 03:57:00,270 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:57:59] 2025-10-13 03:57:00,540 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:57:59] 2025-10-13 03:57:00,887 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:57:59] 2025-10-13 03:57:00,946 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:57:59] 2025-10-13 03:57:01,304 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:57:59] 2025-10-13 03:57:02,309 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:57:59] 2025-10-13 03:57:04,894 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:57:59] 2025-10-13 03:57:29,148 | INFO     | PID=10700 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 23:57:59] 2025-10-13 03:57:29,148 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:57:59] 2025-10-13 03:57:29,148 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:57:59] 2025-10-13 03:57:29,148 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:57:59] 2025-10-13 03:57:53,530 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:57:59] 2025-10-13 03:57:54,044 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140213847095104)>', '<ExcThread(monitor, started 140213393270528)>']
[2025-10-12 23:57:59] 2025-10-13 03:57:54,270 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:57:59] 2025-10-13 03:57:54,270 | INFO     | [monitor] control thread has ended
[2025-10-12 23:57:59] 2025-10-13 03:57:59,070 | INFO     | all workflow threads have been joined
[2025-10-12 23:57:59] 2025-10-13 03:57:59,070 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:57:59] 2025-10-13 03:57:59,070 | INFO     | traces error code: 0
[2025-10-12 23:57:59] 2025-10-13 03:57:59,071 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:57:59] 2025-10-13 03:57:59,188 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:57:59] 2025-10-13 03:57:59,193 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:57:59] 2025-10-13 03:57:59,199 [wrapper] pilotpid: 10700
[2025-10-12 23:57:59] 2025-10-13 03:57:59,204 [wrapper] Pilot exit status: 0
[2025-10-12 23:57:59] 2025-10-13 03:57:59,224 [wrapper] pandaids: 6840749902
[2025-10-12 23:57:59] 2025-10-13 03:57:59,281 [wrapper] cleanup supervisor_pilot  5761 10701
[2025-10-12 23:57:59] 2025-10-13 03:57:59,286 [wrapper] Test setup, not cleaning
[2025-10-12 23:57:59] 2025-10-13 03:57:59,290 [wrapper] apfmon messages muted
[2025-10-12 23:57:59] 2025-10-13 03:57:59,295 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:57:59] 2025-10-13 03:57:59,300 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:57:59]  *** Error codes and diagnostics ***
[2025-10-12 23:57:59]     "exeErrorCode": 0,
[2025-10-12 23:57:59]     "exeErrorDiag": "",
[2025-10-12 23:57:59]     "pilotErrorCode": 0,
[2025-10-12 23:57:59]     "pilotErrorDiag": "",
[2025-10-12 23:57:59]  *** Listing of results directory ***
[2025-10-12 23:57:59] total 411740
[2025-10-12 23:57:59] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 16:55 pilot3.tar.gz
[2025-10-12 23:57:59] -rwx------ 1 boincer umatlas     36292 Oct 12 17:03 runpilot2-wrapper.sh
[2025-10-12 23:57:59] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 17:03 queuedata.json
[2025-10-12 23:57:59] -rw-r--r-- 1 boincer umatlas       100 Oct 12 21:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:57:59] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 21:51 run_atlas
[2025-10-12 23:57:59] -rw-r--r-- 1 boincer umatlas       105 Oct 12 21:51 job.xml
[2025-10-12 23:57:59] -rw-r--r-- 2 boincer umatlas 219381157 Oct 12 21:51 EVNT.46676267._004763.pool.root.1
[2025-10-12 23:57:59] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 21:51 start_atlas.sh
[2025-10-12 23:57:59] drwxrwx--x 2 boincer umatlas      4096 Oct 12 21:51 shared
[2025-10-12 23:57:59] -rw-r--r-- 2 boincer umatlas    569672 Oct 12 21:51 input.tar.gz
[2025-10-12 23:57:59] -rw-r--r-- 1 boincer umatlas         0 Oct 12 21:51 boinc_lockfile
[2025-10-12 23:57:59] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 21:51 pandaJob.out
[2025-10-12 23:57:59] -rw------- 1 boincer umatlas    975595 Oct 12 21:51 agis_schedconf.cvmfs.json
[2025-10-12 23:57:59] -rw------- 1 boincer umatlas   1560580 Oct 12 21:51 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:57:59] drwx------ 5 boincer umatlas      4096 Oct 12 21:51 pilot3
[2025-10-12 23:57:59] -rw------- 1 boincer umatlas 195493063 Oct 12 23:56 HITS.46676269._089330.pool.root.1
[2025-10-12 23:57:59] -rw------- 1 boincer umatlas        95 Oct 12 23:56 pilot_heartbeat.json
[2025-10-12 23:57:59] -rw-r--r-- 1 boincer umatlas       529 Oct 12 23:56 boinc_task_state.xml
[2025-10-12 23:57:59] -rw------- 1 boincer umatlas      1050 Oct 12 23:56 memory_monitor_summary.json
[2025-10-12 23:57:59] -rw------- 1 boincer umatlas    362893 Oct 12 23:56 log.46676269._089330.job.log.tgz.1
[2025-10-12 23:57:59] -rw------- 1 boincer umatlas      7842 Oct 12 23:56 heartbeat.json
[2025-10-12 23:57:59] -rw-r--r-- 1 boincer umatlas      5909 Oct 12 23:57 init_data.xml
[2025-10-12 23:57:59] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 23:57 boinc_mmap_file
[2025-10-12 23:57:59] -rw-r--r-- 1 boincer umatlas        27 Oct 12 23:57 wrapper_checkpoint.txt
[2025-10-12 23:57:59] -rw------- 1 boincer umatlas      4746 Oct 12 23:57 pilotlog.txt
[2025-10-12 23:57:59] -rw------- 1 boincer umatlas   1058850 Oct 12 23:57 log.46676269._089330.job.log.1
[2025-10-12 23:57:59] -rw------- 1 boincer umatlas       357 Oct 12 23:57 output.list
[2025-10-12 23:57:59] -rw-r--r-- 1 boincer umatlas       620 Oct 12 23:57 runtime_log
[2025-10-12 23:57:59] -rw------- 1 boincer umatlas   1443840 Oct 12 23:57 result.tar.gz
[2025-10-12 23:57:59] -rw-r--r-- 1 boincer umatlas      8698 Oct 12 23:57 runtime_log.err
[2025-10-12 23:57:59] -rw------- 1 boincer umatlas       658 Oct 12 23:57 aDuLDmwOIS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0XlNDmonl0Rn.diag
[2025-10-12 23:57:59] -rw-r--r-- 1 boincer umatlas     20857 Oct 12 23:57 stderr.txt
[2025-10-12 23:57:59] HITS file was successfully produced:
[2025-10-12 23:57:59] -rw------- 1 boincer umatlas 195493063 Oct 12 23:56 shared/HITS.pool.root.1
[2025-10-12 23:57:59]  *** Contents of shared directory: ***
[2025-10-12 23:57:59] total 407144
[2025-10-12 23:57:59] -rw-r--r-- 2 boincer umatlas 219381157 Oct 12 21:51 ATLAS.root_0
[2025-10-12 23:57:59] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 21:51 start_atlas.sh
[2025-10-12 23:57:59] -rw-r--r-- 2 boincer umatlas    569672 Oct 12 21:51 input.tar.gz
[2025-10-12 23:57:59] -rw------- 1 boincer umatlas 195493063 Oct 12 23:56 HITS.pool.root.1
[2025-10-12 23:57:59] -rw------- 1 boincer umatlas   1443840 Oct 12 23:57 result.tar.gz
23:58:00 (6919): run_atlas exited; CPU time 55802.490483
23:58:00 (6919): called boinc_finish(0)

</stderr_txt>
]]>

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