Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:53:31 (3233495): wrapper (7.7.26015): starting
13:53:31 (3233495): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 13:53:31] Arguments: --nthreads 3
[2025-10-13 13:53:31] Threads: 3
[2025-10-13 13:53:31] Checking for CVMFS
[2025-10-13 13:53:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 13:53:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 13:53:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 13:53:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 13:53:31] 2.9.2.0 1532479 5542 85320 151660 1 57 30081970 36864001 0 130560 0 4463485 99.991 193400 753 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 13:53:31] CVMFS is ok
[2025-10-13 13:53:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 13:53:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 13:53:31] Further information can be found at the LHC@home message board.
[2025-10-13 13:53:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 13:53:31] Checking for apptainer binary...
[2025-10-13 13:53:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 13:53:31] Running /usr/bin/apptainer --version
[2025-10-13 13:53:31] apptainer version 1.4.1-1.1
[2025-10-13 13:53:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 13:53:31] magicA161
[2025-10-13 13:53:31] apptainer works
[2025-10-13 13:53:31] Set ATHENA_PROC_NUMBER=3
[2025-10-13 13:53:31] Set ATHENA_CORE_NUMBER=3
[2025-10-13 13:53:31] Starting ATLAS job with PandaID=6840749904
[2025-10-13 13:53:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 15:12:10]  *** The last 200 lines of the pilot log: ***
[2025-10-13 15:12:10] 2025-10-13 13:11:40,346 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 15:12:10] 2025-10-13 13:11:40,346 | INFO     | update_server=False
[2025-10-13 15:12:10] 2025-10-13 13:11:40,346 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 15:12:10] 2025-10-13 13:11:40,346 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 15:12:10] 2025-10-13 13:11:40,346 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 15:12:10] 2025-10-13 13:11:40,347 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 15:12:10] 2025-10-13 13:11:41,037 | INFO     | all job control threads have been joined
[2025-10-13 15:12:10] 2025-10-13 13:11:41,076 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 15:12:10] 2025-10-13 13:11:41,077 | INFO     | aborting loop
[2025-10-13 15:12:10] 2025-10-13 13:11:41,238 | INFO     | all data control threads have been joined
[2025-10-13 15:12:10] 2025-10-13 13:11:41,352 | INFO     | [job] retrieve thread has finished
[2025-10-13 15:12:10] 2025-10-13 13:11:41,352 | INFO     | [job] queue monitor thread has finished
[2025-10-13 15:12:10] 2025-10-13 13:11:41,579 | INFO     | [payload] validate_post thread has finished
[2025-10-13 15:12:10] 2025-10-13 13:11:41,829 | INFO     | all payload control threads have been joined
[2025-10-13 15:12:10] 2025-10-13 13:11:41,850 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 15:12:10] 2025-10-13 13:11:42,043 | INFO     | [job] control thread has finished
[2025-10-13 15:12:10] 2025-10-13 13:11:42,082 | INFO     | [job] job monitor thread has finished
[2025-10-13 15:12:10] 2025-10-13 13:11:42,133 | INFO     | [data] copytool_in thread has finished
[2025-10-13 15:12:10] 2025-10-13 13:11:42,244 | INFO     | [data] control thread has finished
[2025-10-13 15:12:10] 2025-10-13 13:11:42,353 | INFO     | [data] copytool_out thread has finished
[2025-10-13 15:12:10] 2025-10-13 13:11:42,500 | INFO     | [job] validate thread has finished
[2025-10-13 15:12:10] 2025-10-13 13:11:42,529 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 15:12:10] 2025-10-13 13:11:42,581 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 15:12:10] 2025-10-13 13:11:42,624 | INFO     | [payload] failed_post thread has finished
[2025-10-13 15:12:10] 2025-10-13 13:11:42,835 | INFO     | [payload] control thread has finished
[2025-10-13 15:12:10] 2025-10-13 13:11:43,305 | INFO     | [monitor] cgroup control has ended
[2025-10-13 15:12:10] 2025-10-13 13:11:44,353 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 15:12:10] 2025-10-13 13:11:50,372 | INFO     | job.realtimelogging is not enabled
[2025-10-13 15:12:10] 2025-10-13 13:11:51,378 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 15:12:10] 2025-10-13 13:11:51,510 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140067031754560)>', '<ExcThread(monitor, started 140066399713024)>']
[2025-10-13 15:12:10] 2025-10-13 13:11:56,536 | INFO     | all workflow threads have been joined
[2025-10-13 15:12:10] 2025-10-13 13:11:56,536 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 15:12:10] 2025-10-13 13:11:56,536 | INFO     | traces error code: 0
[2025-10-13 15:12:10] 2025-10-13 13:11:56,537 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 15:12:10] 2025-10-13 13:12:10,605 | INFO     | PID=3237222 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 15:12:10] 2025-10-13 13:12:10,606 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 15:12:10] 2025-10-13 13:12:10,606 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 15:12:10] 2025-10-13 13:12:10,606 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 15:12:10] 2025-10-13 13:12:10,606 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 15:12:10] 2025-10-13 13:12:10,606 | INFO     | [monitor] control thread has ended
[2025-10-13 15:12:10] 2025-10-13 13:12:10,653 [wrapper] ==== pilot stdout END ====
[2025-10-13 15:12:10] 2025-10-13 13:12:10,655 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 15:12:10] 2025-10-13 13:12:10,658 [wrapper] pilotpid: 3237222
[2025-10-13 15:12:10] 2025-10-13 13:12:10,660 [wrapper] Pilot exit status: 0
[2025-10-13 15:12:10] 2025-10-13 13:12:10,668 [wrapper] pandaids: 6840749904
[2025-10-13 15:12:10] 2025-10-13 13:12:10,685 [wrapper] cleanup supervisor_pilot 3255586 3237223
[2025-10-13 15:12:10] 2025-10-13 13:12:10,687 [wrapper] Test setup, not cleaning
[2025-10-13 15:12:10] 2025-10-13 13:12:10,690 [wrapper] apfmon messages muted
[2025-10-13 15:12:10] 2025-10-13 13:12:10,692 [wrapper] ==== wrapper stdout END ====
[2025-10-13 15:12:10] 2025-10-13 13:12:10,695 [wrapper] ==== wrapper stderr END ====
[2025-10-13 15:12:10]  *** Error codes and diagnostics ***
[2025-10-13 15:12:10]     "exeErrorCode": 0,
[2025-10-13 15:12:10]     "exeErrorDiag": "",
[2025-10-13 15:12:10]     "pilotErrorCode": 0,
[2025-10-13 15:12:10]     "pilotErrorDiag": "",
[2025-10-13 15:12:10]  *** Listing of results directory ***
[2025-10-13 15:12:10] total 406724
[2025-10-13 15:12:10] -rw-r--r-- 1 boinc boinc    557409 Oct 12 22:55 pilot3.tar.gz
[2025-10-13 15:12:10] -rwx------ 1 boinc boinc     36292 Oct 12 23:00 runpilot2-wrapper.sh
[2025-10-13 15:12:10] -rw-r--r-- 1 boinc boinc      5112 Oct 12 23:00 queuedata.json
[2025-10-13 15:12:10] -rw-r--r-- 1 boinc boinc       100 Oct 13 13:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 15:12:10] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 13:53 run_atlas
[2025-10-13 15:12:10] -rw-r--r-- 1 boinc boinc       105 Oct 13 13:53 job.xml
[2025-10-13 15:12:10] -rw-r--r-- 2 boinc boinc 219381157 Oct 13 13:53 EVNT.46676267._004763.pool.root.1
[2025-10-13 15:12:10] -rw-r--r-- 2 boinc boinc    569682 Oct 13 13:53 input.tar.gz
[2025-10-13 15:12:10] -rw-r--r-- 2 boinc boinc     15120 Oct 13 13:53 start_atlas.sh
[2025-10-13 15:12:10] drwxrwx--x 2 boinc boinc      4096 Oct 13 13:53 shared
[2025-10-13 15:12:10] -rw-r--r-- 1 boinc boinc         0 Oct 13 13:53 boinc_setup_complete
[2025-10-13 15:12:10] -rw-r--r-- 1 boinc boinc      6449 Oct 13 13:53 init_data.xml
[2025-10-13 15:12:10] -rw-r--r-- 1 boinc boinc         0 Oct 13 13:53 boinc_lockfile
[2025-10-13 15:12:10] -rw-r--r-- 1 boinc boinc      2550 Oct 13 13:53 pandaJob.out
[2025-10-13 15:12:10] -rw------- 1 boinc boinc    972497 Oct 13 13:53 agis_schedconf.cvmfs.json
[2025-10-13 15:12:10] -rw------- 1 boinc boinc   1560580 Oct 13 13:53 agis_ddmendpoints.agis.ALL.json
[2025-10-13 15:12:10] drwx------ 5 boinc boinc      4096 Oct 13 13:53 pilot3
[2025-10-13 15:12:10] -rw-r--r-- 1 boinc boinc       529 Oct 13 15:11 boinc_task_state.xml
[2025-10-13 15:12:10] -rw------- 1 boinc boinc 191354167 Oct 13 15:11 HITS.46676269._089332.pool.root.1
[2025-10-13 15:12:10] -rw------- 1 boinc boinc      1027 Oct 13 15:11 memory_monitor_summary.json
[2025-10-13 15:12:10] -rw------- 1 boinc boinc    245257 Oct 13 15:11 log.46676269._089332.job.log.tgz.1
[2025-10-13 15:12:10] -rw------- 1 boinc boinc      7754 Oct 13 15:11 heartbeat.json
[2025-10-13 15:12:10] -rw------- 1 boinc boinc       747 Oct 13 15:12 pilotlog.txt
[2025-10-13 15:12:10] -rw------- 1 boinc boinc        95 Oct 13 15:12 pilot_heartbeat.json
[2025-10-13 15:12:10] -rw------- 1 boinc boinc    691253 Oct 13 15:12 log.46676269._089332.job.log.1
[2025-10-13 15:12:10] -rw-r--r-- 1 boinc boinc      8192 Oct 13 15:12 boinc_mmap_file
[2025-10-13 15:12:10] -rw-r--r-- 1 boinc boinc        27 Oct 13 15:12 wrapper_checkpoint.txt
[2025-10-13 15:12:10] -rw------- 1 boinc boinc       357 Oct 13 15:12 output.list
[2025-10-13 15:12:10] -rw-r--r-- 1 boinc boinc       620 Oct 13 15:12 runtime_log
[2025-10-13 15:12:10] -rw------- 1 boinc boinc    952320 Oct 13 15:12 result.tar.gz
[2025-10-13 15:12:10] -rw-r--r-- 1 boinc boinc      8792 Oct 13 15:12 runtime_log.err
[2025-10-13 15:12:10] -rw------- 1 boinc boinc       661 Oct 13 15:12 EnFLDmqLIS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmk2UMDmvPscom.diag
[2025-10-13 15:12:10] -rw-r--r-- 1 boinc boinc      7614 Oct 13 15:12 stderr.txt
[2025-10-13 15:12:10] HITS file was successfully produced:
[2025-10-13 15:12:10] -rw------- 1 boinc boinc 191354167 Oct 13 15:11 shared/HITS.pool.root.1
[2025-10-13 15:12:10]  *** Contents of shared directory: ***
[2025-10-13 15:12:10] total 402628
[2025-10-13 15:12:10] -rw-r--r-- 2 boinc boinc 219381157 Oct 13 13:53 ATLAS.root_0
[2025-10-13 15:12:10] -rw-r--r-- 2 boinc boinc    569682 Oct 13 13:53 input.tar.gz
[2025-10-13 15:12:10] -rw-r--r-- 2 boinc boinc     15120 Oct 13 13:53 start_atlas.sh
[2025-10-13 15:12:10] -rw------- 1 boinc boinc 191354167 Oct 13 15:11 HITS.pool.root.1
[2025-10-13 15:12:10] -rw------- 1 boinc boinc    952320 Oct 13 15:12 result.tar.gz
15:12:12 (3233495): run_atlas exited; CPU time 13382.150483
15:12:12 (3233495): called boinc_finish(0)

</stderr_txt>
]]>

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