Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:51:22 (1114344): wrapper (7.7.26015): starting
18:51:22 (1114344): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 18:51:22] Arguments: --nthreads 12
[2025-10-12 18:51:22] Threads: 12
[2025-10-12 18:51:22] Checking for CVMFS
[2025-10-12 18:51:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:51:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:51:23] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:51:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:51:23] 2.11.5.0 2595 32298 163976 151643 2 541 27676909 45568000 13649 130560 0 342689052 99.878 148730295 27752 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-12 18:51:23] CVMFS is ok
[2025-10-12 18:51:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 18:51:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 18:51:24] Further information can be found at the LHC@home message board.
[2025-10-12 18:51:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:51:24] Checking for apptainer binary...
[2025-10-12 18:51:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 18:51:24] Running /usr/bin/apptainer --version
[2025-10-12 18:51:24] apptainer version 1.4.1-1.el9
[2025-10-12 18:51:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:51:24] wns0066.triumf.lcg
[2025-10-12 18:51:24] apptainer works
[2025-10-12 18:51:24] Set ATHENA_PROC_NUMBER=12
[2025-10-12 18:51:24] Set ATHENA_CORE_NUMBER=12
[2025-10-12 18:51:24] Starting ATLAS job with PandaID=6840969493
[2025-10-12 18:51:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:56:17]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:56:17] 2025-10-13 01:55:43,516 | WARNING  | wrong length of table data, x=[1760320378.0], y=[1916.0] (must be same and length>=4)
[2025-10-12 18:56:17] 2025-10-13 01:55:43,516 | INFO     | could have reported an average CPU frequency of 2555 MHz (4 samples)
[2025-10-12 18:56:17] 2025-10-13 01:55:43,516 | INFO     | ..............................
[2025-10-12 18:56:17] 2025-10-13 01:55:43,516 | INFO     | . Timing measurements:
[2025-10-12 18:56:17] 2025-10-13 01:55:43,517 | INFO     | . get job = 0 s
[2025-10-12 18:56:17] 2025-10-13 01:55:43,517 | INFO     | . initial setup = 3 s
[2025-10-12 18:56:17] 2025-10-13 01:55:43,517 | INFO     | . payload setup = 17 s
[2025-10-12 18:56:17] 2025-10-13 01:55:43,517 | INFO     | . stage-in = 0 s
[2025-10-12 18:56:17] 2025-10-13 01:55:43,517 | INFO     | . payload execution = 43 s
[2025-10-12 18:56:17] 2025-10-13 01:55:43,517 | INFO     | . stage-out = 0 s
[2025-10-12 18:56:17] 2025-10-13 01:55:43,517 | INFO     | . log creation = 0 s
[2025-10-12 18:56:17] 2025-10-13 01:55:43,517 | INFO     | ..............................
[2025-10-12 18:56:17] 2025-10-13 01:55:43,517 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 18:56:17] 2025-10-13 01:55:43,517 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840969493/pilotlog.txt
[2025-10-12 18:56:17] 2025-10-13 01:55:43,540 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-12 18:56:17] - Log from pilotlog.txt -
[2025-10-12 18:56:17] 2025-10-13 01:55:43,511 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6840969493/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 18:56:17] 2025-10-13 01:55:43,515 | INFO     | extracted standard info from prmon json
[2025-10-12 18:56:17] 2025-10-13 01:55:43,515 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 18:56:17] 2025-10-13 01:55:43,515 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 18:56:17] 2025-10-13 01:55:43,515 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:56:17] 2025-10-13 01:55:43,516 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:56:17] 2025-10-13 01:55:43,516 | WARNING  | wrong length of table data, x=[1760320378.0], y=[1916.0] (must be same and length>=4)
[2025-10-12 18:56:17] 2025-10-13 01:55:43,516 | INFO     | could have reported an average CPU frequency of 2555 MHz (4 samples)
[2025-10-12 18:56:17] 2025-10-13 01:55:43,516 | INFO     | ..............................
[2025-10-12 18:56:17] 2025-10-13 01:55:43,516 | INFO     | . Timing measurements:
[2025-10-12 18:56:17] 2025-10-13 01:55:43,517 | INFO     | . get job = 0 s
[2025-10-12 18:56:17] 2025-10-13 01:55:43,517 | INFO     | . initial setup = 3 s
[2025-10-12 18:56:17] 2025-10-13 01:55:43,517 | INFO     | . payload setup = 17 s
[2025-10-12 18:56:17] 2025-10-13 01:55:43,517 | INFO     | . stage-in = 0 s
[2025-10-12 18:56:17] 2025-10-13 01:55:43,517 | INFO     | . payload execution = 43 s
[2025-10-12 18:56:17] 2025-10-13 01:55:43,517 | INFO     | . stage-out = 0 s
[2025-10-12 18:56:17] 2025-10-13 01:55:43,517 | INFO     | . log creation = 0 s
[2025-10-12 18:56:17] 2025-10-13 01:55:43,517 | INFO     | ..............................
[2025-10-12 18:56:17] 2025-10-13 01:55:43,517 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 18:56:17] 2025-10-13 01:55:43,517 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840969493/pilotlog.txt
[2025-10-12 18:56:17] 2025-10-13 01:55:43,541 | WARNING  | 
[2025-10-12 18:56:17] [begin log extracts]
[2025-10-12 18:56:17] - Log from pilotlog.txt -
[2025-10-12 18:56:17] 2025-10-13 01:55:43,511 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6840969493/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 18:56:17] 2025-10-13 01:55:43,515 | INFO     | extracted standard info from prmon json
[2025-10-12 18:56:17] 2025-10-13 01:55:43,515 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 18:56:17] 2025-10-13 01:55:43,515 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 18:56:17] 2025-10-13 01:55:43,515 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:56:17] 2025-10-13 01:55:43,516 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:56:17] 2025-10-13 01:55:43,516 | WARNING  | wrong length of table data, x=[1760320378.0], y=[1916.0] (must be same and length>=4)
[2025-10-12 18:56:17] 2025-10-13 01:55:43,516 | INFO     | could have reported an average CPU frequency of 2555 MHz (4 samples)
[2025-10-12 18:56:17] 2025-10-13 01:55:43,516 | INFO     | ..............................
[2025-10-12 18:56:17] 2025-10-13 01:55:43,516 | INFO     | . Timing measurements:
[2025-10-12 18:56:17] 2025-10-13 01:55:43,517 | INFO     | . get job = 0 s
[2025-10-12 18:56:17] 2025-10-13 01:55:43,517 | INFO     | . initial setup = 3 s
[2025-10-12 18:56:17] 2025-10-13 01:55:43,517 | INFO     | . payload setup = 17 s
[2025-10-12 18:56:17] 2025-10-13 01:55:43,517 | INFO     | . stage-in = 0 s
[2025-10-12 18:56:17] 2025-10-13 01:55:43,517 | INFO     | . payload execution = 43 s
[2025-10-12 18:56:17] 2025-10-13 01:55:43,517 | INFO     | . stage-out = 0 s
[2025-10-12 18:56:17] 2025-10-13 01:55:43,517 | INFO     | . log creation = 0 s
[2025-10-12 18:56:17] 2025-10-13 01:55:43,517 | INFO     | ..............................
[2025-10-12 18:56:17] 2025-10-13 01:55:43,517 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 18:56:17] 2025-10-13 01:55:43,517 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840969493/pilotlog.txt
[2025-10-12 18:56:17] [end log extracts]
[2025-10-12 18:56:17] 2025-10-13 01:55:43,541 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-12 18:56:17] 2025-10-13 01:55:43,542 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-12 18:56:17] 2025-10-13 01:55:43,643 | INFO     | time since job start (233s) is within the limit (172800.0s)
[2025-10-12 18:56:17] 2025-10-13 01:55:43,708 | INFO     | 
[2025-10-12 18:56:17] 2025-10-13 01:55:43,708 | INFO     | job summary report
[2025-10-12 18:56:17] 2025-10-13 01:55:43,708 | INFO     | --------------------------------------------------
[2025-10-12 18:56:17] 2025-10-13 01:55:43,708 | INFO     | PanDA job id: 6840969493
[2025-10-12 18:56:17] 2025-10-13 01:55:43,708 | INFO     | task id: 46676269
[2025-10-12 18:56:17] 2025-10-13 01:55:43,708 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-12 18:53:22,986 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-12 18:56:17] 2025-10-13 01:55:43,708 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:56:17] 2025-10-13 01:55:43,708 | INFO     | pilot state: failed 
[2025-10-12 18:56:17] 2025-10-13 01:55:43,708 | INFO     | transexitcode: 65
[2025-10-12 18:56:17] 2025-10-13 01:55:43,708 | INFO     | exeerrorcode: 65
[2025-10-12 18:56:17] 2025-10-13 01:55:43,709 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 18:56:17] 2025-10-13 01:55:43,709 | INFO     | exitcode: 65
[2025-10-12 18:56:17] 2025-10-13 01:55:43,709 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 18:56:17] 2025-10-13 01:55:43,709 | INFO     | cpuconsumptiontime: 19 s
[2025-10-12 18:56:17] 2025-10-13 01:55:43,709 | INFO     | nevents: 0
[2025-10-12 18:56:17] 2025-10-13 01:55:43,709 | INFO     | neventsw: 0
[2025-10-12 18:56:17] 2025-10-13 01:55:43,709 | INFO     | pid: 1124786
[2025-10-12 18:56:17] 2025-10-13 01:55:43,709 | INFO     | pgrp: 1124786
[2025-10-12 18:56:17] 2025-10-13 01:55:43,709 | INFO     | corecount: 12
[2025-10-12 18:56:17] 2025-10-13 01:55:43,717 | INFO     | event service: False
[2025-10-12 18:56:17] 2025-10-13 01:55:43,717 | INFO     | sizes: {0: 2348853, 11: 2348853, 14: 2349143, 22: 2349171, 64: 2372411, 66: 2376859, 197: 2376997}
[2025-10-12 18:56:17] 2025-10-13 01:55:43,718 | INFO     | --------------------------------------------------
[2025-10-12 18:56:17] 2025-10-13 01:55:43,718 | INFO     | 
[2025-10-12 18:56:17] 2025-10-13 01:55:43,718 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-12 18:56:17] 2025-10-13 01:55:43,764 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:56:17] 2025-10-13 01:55:43,765 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:56:17] 2025-10-13 01:55:43,765 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:56:17] 2025-10-13 01:55:43,765 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:56:17] 2025-10-13 01:55:43,765 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:56:17] 2025-10-13 01:55:43,765 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:56:17] 2025-10-13 01:55:43,765 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:56:17] 2025-10-13 01:55:43,765 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:56:17] 2025-10-13 01:55:43,765 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:56:17] 2025-10-13 01:55:43,765 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:56:17] 2025-10-13 01:55:43,765 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:56:17] 2025-10-13 01:55:43,765 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:56:17] 2025-10-13 01:55:43,765 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:56:17] 2025-10-13 01:55:43,765 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:56:17] 2025-10-13 01:55:43,765 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:56:17] 2025-10-13 01:55:43,765 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:56:17] 2025-10-13 01:55:43,765 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:56:17] 2025-10-13 01:55:43,766 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:56:17] 2025-10-13 01:55:43,766 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:56:17] 2025-10-13 01:55:43,766 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:56:17] 2025-10-13 01:55:43,766 | INFO     | job 6840969493 has completed (purged errors)
[2025-10-12 18:56:17] 2025-10-13 01:55:43,766 | INFO     | overall cleanup function is called
[2025-10-12 18:56:17] 2025-10-13 01:55:44,773 | INFO     | --- collectZombieJob: --- 10, [1124786]
[2025-10-12 18:56:17] 2025-10-13 01:55:44,773 | INFO     | zombie collector waiting for pid 1124786
[2025-10-12 18:56:17] 2025-10-13 01:55:44,773 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:56:17] 2025-10-13 01:55:44,773 | INFO     | collected zombie processes
[2025-10-12 18:56:17] 2025-10-13 01:55:44,773 | INFO     | will attempt to kill all subprocesses of pid=1124786
[2025-10-12 18:56:17] 2025-10-13 01:55:45,092 | INFO     | process IDs to be killed: [1124786] (in reverse order)
[2025-10-12 18:56:17] 2025-10-13 01:55:45,275 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:56:17] 2025-10-13 01:55:45,275 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:56:17] 2025-10-13 01:55:45,303 | INFO     | did not find any defunct processes belonging to 1124786
[2025-10-12 18:56:17] 2025-10-13 01:55:45,329 | INFO     | did not find any defunct processes belonging to 1124786
[2025-10-12 18:56:17] 2025-10-13 01:55:45,332 | INFO     | ready for new job
[2025-10-12 18:56:17] 2025-10-13 01:55:45,333 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:56:17] 2025-10-13 01:55:45,334 | INFO     | ***************************************
[2025-10-12 18:56:17] 2025-10-13 01:55:45,334 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:56:17] 2025-10-13 01:55:45,334 | INFO     | ***************************************
[2025-10-12 18:56:17] 2025-10-13 01:55:45,334 | INFO     | 
[2025-10-12 18:56:17] 2025-10-13 01:55:45,340 | INFO     | architecture information:
[2025-10-12 18:56:17] 2025-10-13 01:55:45,342 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:56:17] 2025-10-13 01:55:45,376 | INFO     | cat /etc/os-release:
[2025-10-12 18:56:17] NAME="CentOS Linux"
[2025-10-12 18:56:17] VERSION="7 (Core)"
[2025-10-12 18:56:17] ID="centos"
[2025-10-12 18:56:17] ID_LIKE="rhel fedora"
[2025-10-12 18:56:17] VERSION_ID="7"
[2025-10-12 18:56:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:56:17] ANSI_COLOR="0;31"
[2025-10-12 18:56:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:56:17] HOME_URL="https://www.centos.org/"
[2025-10-12 18:56:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:56:17] 
[2025-10-12 18:56:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:56:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:56:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:56:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:56:17] 
[2025-10-12 18:56:17] 2025-10-13 01:55:45,377 | INFO     | ***************************************
[2025-10-12 18:56:17] 2025-10-13 01:55:45,880 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-12 18:56:17] 2025-10-13 01:55:45,922 | INFO     | sufficient remaining disk space (2051861905408 B)
[2025-10-12 18:56:17] 2025-10-13 01:55:45,922 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:56:17] 2025-10-13 01:55:45,923 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:56:17] 2025-10-13 01:55:45,923 | INFO     | update_server=False
[2025-10-12 18:56:17] 2025-10-13 01:55:45,923 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:56:17] 2025-10-13 01:55:45,923 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:56:17] 2025-10-13 01:55:46,094 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:56:17] 2025-10-13 01:55:46,183 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 18:56:17] 2025-10-13 01:55:46,183 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 18:56:17] 2025-10-13 01:55:46,183 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:56:17] 2025-10-13 01:55:46,183 | INFO     | will abort loop
[2025-10-12 18:56:17] 2025-10-13 01:55:46,253 | INFO     | all data control threads have been joined
[2025-10-12 18:56:17] 2025-10-13 01:55:46,928 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:56:17] 2025-10-13 01:55:46,954 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:56:17] 2025-10-13 01:55:46,987 | INFO     | all payload control threads have been joined
[2025-10-12 18:56:17] 2025-10-13 01:55:47,038 | INFO     | [job] validate thread has finished
[2025-10-12 18:56:17] 2025-10-13 01:55:47,109 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:56:17] 2025-10-13 01:55:47,189 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:56:17] 2025-10-13 01:55:47,200 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:56:17] 2025-10-13 01:55:47,259 | INFO     | [data] control thread has finished
[2025-10-12 18:56:17] 2025-10-13 01:55:47,410 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:56:17] 2025-10-13 01:55:47,569 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:56:17] 2025-10-13 01:55:47,570 | INFO     | all job control threads have been joined
[2025-10-12 18:56:17] 2025-10-13 01:55:47,996 | INFO     | [payload] control thread has finished
[2025-10-12 18:56:17] 2025-10-13 01:55:48,104 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:56:17] 2025-10-13 01:55:48,319 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:56:17] 2025-10-13 01:55:48,393 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:56:17] 2025-10-13 01:55:48,576 | INFO     | [job] control thread has finished
[2025-10-12 18:56:17] 2025-10-13 01:55:48,721 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:56:17] 2025-10-13 01:55:49,727 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:56:17] 2025-10-13 01:55:49,931 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:56:17] 2025-10-13 01:55:50,530 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:56:17] 2025-10-13 01:55:51,066 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140096205961024)>', '<ExcThread(monitor, started 140094920980224)>']
[2025-10-12 18:56:17] 2025-10-13 01:55:56,092 | INFO     | all workflow threads have been joined
[2025-10-12 18:56:17] 2025-10-13 01:55:56,092 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:56:17] 2025-10-13 01:55:56,092 | INFO     | traces error code: 0
[2025-10-12 18:56:17] 2025-10-13 01:55:56,093 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:56:17] 2025-10-13 01:56:17,117 | INFO     | PID=1118058 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 18:56:17] 2025-10-13 01:56:17,118 | INFO     | .. there are 35 such processes running
[2025-10-12 18:56:17] 2025-10-13 01:56:17,118 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:56:17] 2025-10-13 01:56:17,118 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:56:17] 2025-10-13 01:56:17,118 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:56:17] 2025-10-13 01:56:17,118 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:56:17] 2025-10-13 01:56:17,119 | INFO     | [monitor] control thread has ended
[2025-10-12 18:56:17] 2025-10-13 01:56:17,233 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:56:17] 2025-10-13 01:56:17,235 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:56:17] 2025-10-13 01:56:17,239 [wrapper] pilotpid: 1118058
[2025-10-12 18:56:17] 2025-10-13 01:56:17,262 [wrapper] Pilot exit status: 0
[2025-10-12 18:56:17] 2025-10-13 01:56:17,312 [wrapper] pandaids: 6840969493
[2025-10-12 18:56:17] 2025-10-13 01:56:17,386 [wrapper] cleanup supervisor_pilot 1118064 1118059
[2025-10-12 18:56:17] 2025-10-13 01:56:17,389 [wrapper] Test setup, not cleaning
[2025-10-12 18:56:17] 2025-10-13 01:56:17,396 [wrapper] apfmon messages muted
[2025-10-12 18:56:17] 2025-10-13 01:56:17,399 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:56:17] 2025-10-13 01:56:17,407 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:56:17]  *** Error codes and diagnostics ***
[2025-10-12 18:56:17]     "exeErrorCode": 65,
[2025-10-12 18:56:17]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 18:56:17]     "pilotErrorCode": 1305,
[2025-10-12 18:56:17]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 18:56:17]  *** Listing of results directory ***
[2025-10-12 18:56:17] total 222356
[2025-10-12 18:56:17] -rw-r--r--. 1 boinc boinc    557409 Oct 12 16:11 pilot3.tar.gz
[2025-10-12 18:56:17] -rw-r--r--. 1 boinc boinc      5112 Oct 12 16:41 queuedata.json
[2025-10-12 18:56:17] -rwx------. 1 boinc boinc     36292 Oct 12 16:41 runpilot2-wrapper.sh
[2025-10-12 18:56:17] -rw-r--r--. 1 boinc boinc       100 Oct 12 18:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:56:17] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 18:51 run_atlas
[2025-10-12 18:56:17] -rw-r--r--. 1 boinc boinc       105 Oct 12 18:51 job.xml
[2025-10-12 18:56:17] -rw-r--r--. 1 boinc boinc      6594 Oct 12 18:51 init_data.xml
[2025-10-12 18:56:17] -rw-r--r--. 2 boinc boinc 223561730 Oct 12 18:51 EVNT.46676267._004662.pool.root.1
[2025-10-12 18:56:17] -rw-r--r--. 2 boinc boinc     15120 Oct 12 18:51 start_atlas.sh
[2025-10-12 18:56:17] drwxrwx--x. 2 boinc boinc      4096 Oct 12 18:51 shared
[2025-10-12 18:56:17] -rw-r--r--. 2 boinc boinc    569677 Oct 12 18:51 input.tar.gz
[2025-10-12 18:56:17] -rw-r--r--. 1 boinc boinc         0 Oct 12 18:51 boinc_lockfile
[2025-10-12 18:56:17] -rw-r--r--. 1 boinc boinc      2549 Oct 12 18:51 pandaJob.out
[2025-10-12 18:56:17] -rw-------. 1 boinc boinc    975595 Oct 12 18:51 agis_schedconf.cvmfs.json
[2025-10-12 18:56:17] -rw-------. 1 boinc boinc   1560580 Oct 12 18:51 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:56:17] drwx------. 5 boinc boinc      4096 Oct 12 18:51 pilot3
[2025-10-12 18:56:17] -rw-------. 1 boinc boinc       953 Oct 12 18:53 memory_monitor_summary.json
[2025-10-12 18:56:17] -rw-------. 1 boinc boinc     21922 Oct 12 18:53 log.46676269._092339.job.log.tgz.1
[2025-10-12 18:56:17] -rw-------. 1 boinc boinc      8419 Oct 12 18:55 heartbeat.json
[2025-10-12 18:56:17] -rw-r--r--. 1 boinc boinc       524 Oct 12 18:56 boinc_task_state.xml
[2025-10-12 18:56:17] -rw-r--r--. 1 boinc boinc        22 Oct 12 18:56 wrapper_checkpoint.txt
[2025-10-12 18:56:17] -rw-r--r--. 1 boinc boinc      8192 Oct 12 18:56 boinc_mmap_file
[2025-10-12 18:56:17] -rw-------. 1 boinc boinc       823 Oct 12 18:56 pilotlog.txt
[2025-10-12 18:56:17] -rw-------. 1 boinc boinc        95 Oct 12 18:56 pilot_heartbeat.json
[2025-10-12 18:56:17] -rw-------. 1 boinc boinc     90511 Oct 12 18:56 log.46676269._092339.job.log.1
[2025-10-12 18:56:17] -rw-------. 1 boinc boinc       188 Oct 12 18:56 output.list
[2025-10-12 18:56:17] -rw-r--r--. 1 boinc boinc       620 Oct 12 18:56 runtime_log
[2025-10-12 18:56:17] -rw-------. 1 boinc boinc    133120 Oct 12 18:56 result.tar.gz
[2025-10-12 18:56:17] -rw-------. 1 boinc boinc       644 Oct 12 18:56 ZE1NDm1rKS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmp4lNDmfQ5Ztn.diag
[2025-10-12 18:56:17] -rw-r--r--. 1 boinc boinc      8528 Oct 12 18:56 runtime_log.err
[2025-10-12 18:56:17] -rw-r--r--. 1 boinc boinc     21826 Oct 12 18:56 stderr.txt
[2025-10-12 18:56:17] No HITS result produced
[2025-10-12 18:56:17]  *** Contents of shared directory: ***
[2025-10-12 18:56:17] total 219036
[2025-10-12 18:56:17] -rw-r--r--. 2 boinc boinc 223561730 Oct 12 18:51 ATLAS.root_0
[2025-10-12 18:56:17] -rw-r--r--. 2 boinc boinc     15120 Oct 12 18:51 start_atlas.sh
[2025-10-12 18:56:17] -rw-r--r--. 2 boinc boinc    569677 Oct 12 18:51 input.tar.gz
[2025-10-12 18:56:17] -rw-------. 1 boinc boinc    133120 Oct 12 18:56 result.tar.gz
18:56:19 (1114344): run_atlas exited; CPU time 26.493087
18:56:19 (1114344): called boinc_finish(0)

</stderr_txt>
]]>

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