Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:05:56 (1338279): wrapper (7.7.26015): starting
13:05:56 (1338279): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 13:05:56] Arguments: --nthreads 12
[2025-10-13 13:05:56] Threads: 12
[2025-10-13 13:05:56] Checking for CVMFS
[2025-10-13 13:05:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 13:05:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 13:05:57] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 13:05:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 13:05:57] 2.13.2.0 8216 26253 234612 151658 2 245 30066027 46080000 50384 130560 0 177586529 99.897 49045254 22757 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-10-13 13:05:57] CVMFS is ok
[2025-10-13 13:05:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 13:05:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 13:05:57] Further information can be found at the LHC@home message board.
[2025-10-13 13:05:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 13:05:57] Checking for apptainer binary...
[2025-10-13 13:05:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 13:05:57] Running /usr/bin/apptainer --version
[2025-10-13 13:05:57] apptainer version 1.4.2-1.el9
[2025-10-13 13:05:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 13:05:58] mff2103.farm.particle.cz
[2025-10-13 13:05:58] apptainer works
[2025-10-13 13:05:58] Set ATHENA_PROC_NUMBER=12
[2025-10-13 13:05:58] Set ATHENA_CORE_NUMBER=12
[2025-10-13 13:05:58] Starting ATLAS job with PandaID=6840713371
[2025-10-13 13:05:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 14:39:41]  *** The last 200 lines of the pilot log: ***
[2025-10-13 14:39:41] 2025-10-13 12:11:45,916 | INFO     | monitor loop #274: job 0:6840713371 is in state 'finished'
[2025-10-13 14:39:41] 2025-10-13 12:11:45,916 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 14:39:41] 2025-10-13 12:11:45,970 | INFO     | time since job start (3916s) is within the limit (172800.0s)
[2025-10-13 14:39:41] 2025-10-13 12:11:47,976 | INFO     | time since job start (3918s) is within the limit (172800.0s)
[2025-10-13 14:39:41] 2025-10-13 12:11:48,421 | INFO     | monitor loop #275: job 0:6840713371 is in state 'finished'
[2025-10-13 14:39:41] 2025-10-13 12:11:48,421 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 14:39:41] 2025-10-13 12:11:49,983 | INFO     | time since job start (3920s) is within the limit (172800.0s)
[2025-10-13 14:39:41] 2025-10-13 12:11:50,930 | INFO     | monitor loop #276: job 0:6840713371 is in state 'finished'
[2025-10-13 14:39:41] 2025-10-13 12:11:50,930 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 14:39:41] 2025-10-13 12:11:51,989 | INFO     | time since job start (3922s) is within the limit (172800.0s)
[2025-10-13 14:39:41] 2025-10-13 12:11:53,435 | INFO     | monitor loop #277: job 0:6840713371 is in state 'finished'
[2025-10-13 14:39:41] 2025-10-13 12:11:53,435 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 14:39:41] 2025-10-13 12:11:53,997 | INFO     | time since job start (3924s) is within the limit (172800.0s)
[2025-10-13 14:39:41] 2025-10-13 12:11:55,938 | INFO     | monitor loop #278: job 0:6840713371 is in state 'finished'
[2025-10-13 14:39:41] 2025-10-13 12:11:55,938 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 14:39:41] 2025-10-13 12:11:56,006 | INFO     | time since job start (3927s) is within the limit (172800.0s)
[2025-10-13 14:39:41] 2025-10-13 12:11:58,013 | INFO     | time since job start (3929s) is within the limit (172800.0s)
[2025-10-13 14:39:41] 2025-10-13 12:11:58,443 | INFO     | monitor loop #279: job 0:6840713371 is in state 'finished'
[2025-10-13 14:39:41] 2025-10-13 12:11:58,444 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 14:39:41] 2025-10-13 12:12:00,030 | INFO     | time since job start (3931s) is within the limit (172800.0s)
[2025-10-13 14:39:41] 2025-10-13 12:12:00,949 | INFO     | monitor loop #280: job 0:6840713371 is in state 'finished'
[2025-10-13 14:39:41] 2025-10-13 12:12:00,949 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 14:39:41] 2025-10-13 12:12:02,037 | INFO     | time since job start (3933s) is within the limit (172800.0s)
[2025-10-13 14:39:41] 2025-10-13 12:12:03,456 | INFO     | monitor loop #281: job 0:6840713371 is in state 'finished'
[2025-10-13 14:39:41] 2025-10-13 12:12:03,456 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 14:39:41] 2025-10-13 12:12:04,043 | INFO     | time since job start (3935s) is within the limit (172800.0s)
[2025-10-13 14:39:41] 2025-10-13 12:12:05,976 | INFO     | monitor loop #282: job 0:6840713371 is in state 'finished'
[2025-10-13 14:39:41] 2025-10-13 12:12:05,976 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 14:39:41] 2025-10-13 12:12:06,090 | INFO     | PID=1350307 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 14:39:41] 2025-10-13 12:12:06,091 | INFO     | .. there are 84 such processes running
[2025-10-13 14:39:41] 2025-10-13 12:12:07,093 | INFO     | time since job start (3938s) is within the limit (172800.0s)
[2025-10-13 14:39:41] 2025-10-13 12:12:08,485 | INFO     | monitor loop #283: job 0:6840713371 is in state 'finished'
[2025-10-13 14:39:41] 2025-10-13 12:12:08,486 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 14:39:41] 2025-10-13 12:12:09,102 | INFO     | time since job start (3940s) is within the limit (172800.0s)
[2025-10-13 14:39:41] 2025-10-13 12:12:09,102 | INFO     | 3941s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-13 14:39:41] 2025-10-13 12:12:10,805 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 14:39:41] 2025-10-13 12:12:10,827 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2859.91709375
[2025-10-13 14:39:41] 2025-10-13 12:12:10,845 | INFO     | using path: /scratch/.boinc/slots/0/PanDA_Pilot-6840713371/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 14:39:41] 2025-10-13 12:12:10,846 | INFO     | extracted standard info from prmon json
[2025-10-13 14:39:41] 2025-10-13 12:12:10,846 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 14:39:41] 2025-10-13 12:12:10,846 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 14:39:41] 2025-10-13 12:12:10,846 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 14:39:41] 2025-10-13 12:12:10,846 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 14:39:41] 2025-10-13 12:12:10,848 | INFO     | fitting pss+swap vs Time
[2025-10-13 14:39:41] 2025-10-13 12:12:10,848 | INFO     | sum of square deviations: 54441953.839285694
[2025-10-13 14:39:41] 2025-10-13 12:12:10,849 | INFO     | sum of deviations: 3449031951.589286
[2025-10-13 14:39:41] 2025-10-13 12:12:10,849 | INFO     | mean x: 1760355642.5535715
[2025-10-13 14:39:41] 2025-10-13 12:12:10,849 | INFO     | mean y: 2649171.3035714286
[2025-10-13 14:39:41] 2025-10-13 12:12:10,849 | INFO     | -- intersect: -111520219299.7854
[2025-10-13 14:39:41] 2025-10-13 12:12:10,849 | INFO     | intersect: -111520219299.7854
[2025-10-13 14:39:41] 2025-10-13 12:12:10,849 | INFO     | chi2: 0.11197641421456514
[2025-10-13 14:39:41] 2025-10-13 12:12:10,849 | INFO     | -- intersect: -111520219299.7854
[2025-10-13 14:39:41] 2025-10-13 12:12:10,849 | INFO     | current memory leak: 63.35 B/s (using 56 data points, chi2=0.11)
[2025-10-13 14:39:41] 2025-10-13 12:12:10,850 | INFO     | could have reported an average CPU frequency of 2889 MHz (6 samples)
[2025-10-13 14:39:41] 2025-10-13 12:12:10,850 | INFO     | ..............................
[2025-10-13 14:39:41] 2025-10-13 12:12:10,850 | INFO     | . Timing measurements:
[2025-10-13 14:39:41] 2025-10-13 12:12:10,850 | INFO     | . get job = 0 s
[2025-10-13 14:39:41] 2025-10-13 12:12:10,850 | INFO     | . initial setup = 1 s
[2025-10-13 14:39:41] 2025-10-13 12:12:10,850 | INFO     | . payload setup = 17 s
[2025-10-13 14:39:41] 2025-10-13 12:12:10,850 | INFO     | . stage-in = 0 s
[2025-10-13 14:39:41] 2025-10-13 12:12:10,850 | INFO     | . payload execution = 3839 s
[2025-10-13 14:39:41] 2025-10-13 12:12:10,850 | INFO     | . stage-out = 1 s
[2025-10-13 14:39:41] 2025-10-13 12:12:10,850 | INFO     | . log creation = 0 s
[2025-10-13 14:39:41] 2025-10-13 12:12:10,850 | INFO     | ..............................
[2025-10-13 14:39:41] 2025-10-13 12:12:11,014 | INFO     | 
[2025-10-13 14:39:41] 2025-10-13 12:12:11,015 | INFO     | job summary report
[2025-10-13 14:39:41] 2025-10-13 12:12:11,015 | INFO     | --------------------------------------------------
[2025-10-13 14:39:41] 2025-10-13 12:12:11,015 | INFO     | PanDA job id: 6840713371
[2025-10-13 14:39:41] 2025-10-13 12:12:11,015 | INFO     | task id: 46676269
[2025-10-13 14:39:41] 2025-10-13 12:12:11,015 | INFO     | errors: (none)
[2025-10-13 14:39:41] 2025-10-13 12:12:11,015 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 14:39:41] 2025-10-13 12:12:11,015 | INFO     | pilot state: finished 
[2025-10-13 14:39:41] 2025-10-13 12:12:11,015 | INFO     | transexitcode: 0
[2025-10-13 14:39:41] 2025-10-13 12:12:11,015 | INFO     | exeerrorcode: 0
[2025-10-13 14:39:41] 2025-10-13 12:12:11,015 | INFO     | exeerrordiag: 
[2025-10-13 14:39:41] 2025-10-13 12:12:11,016 | INFO     | exitcode: 0
[2025-10-13 14:39:41] 2025-10-13 12:12:11,016 | INFO     | exitmsg: OK
[2025-10-13 14:39:41] 2025-10-13 12:12:11,016 | INFO     | cpuconsumptiontime: 34886 s
[2025-10-13 14:39:41] 2025-10-13 12:12:11,016 | INFO     | nevents: 400
[2025-10-13 14:39:41] 2025-10-13 12:12:11,016 | INFO     | neventsw: 0
[2025-10-13 14:39:41] 2025-10-13 12:12:11,016 | INFO     | pid: 1372730
[2025-10-13 14:39:41] 2025-10-13 12:12:11,016 | INFO     | pgrp: 1372730
[2025-10-13 14:39:41] 2025-10-13 12:12:11,016 | INFO     | corecount: 12
[2025-10-13 14:39:41] 2025-10-13 12:12:11,016 | INFO     | event service: False
[2025-10-13 14:39:41] 2025-10-13 12:12:11,016 | INFO     | sizes: {0: 2348687, 1: 2348886, 12: 2348886, 15: 2349176, 22: 2349204, 3860: 2375208, 3862: 2384208, 3863: 2384264, 3904: 2384458}
[2025-10-13 14:39:41] 2025-10-13 12:12:11,016 | INFO     | --------------------------------------------------
[2025-10-13 14:39:41] 2025-10-13 12:12:11,016 | INFO     | 
[2025-10-13 14:39:41] 2025-10-13 12:12:11,016 | INFO     | executing command: ls -lF /scratch/.boinc/slots/0
[2025-10-13 14:39:41] 2025-10-13 12:12:11,109 | INFO     | time since job start (3942s) is within the limit (172800.0s)
[2025-10-13 14:39:41] 2025-10-13 12:12:11,218 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 14:39:41] 2025-10-13 12:12:11,218 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 14:39:41] 2025-10-13 12:12:11,218 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 14:39:41] 2025-10-13 12:12:11,218 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 14:39:41] 2025-10-13 12:12:11,218 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 14:39:41] 2025-10-13 12:12:11,218 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 14:39:41] 2025-10-13 12:12:11,219 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 14:39:41] 2025-10-13 12:12:11,219 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 14:39:41] 2025-10-13 12:12:11,219 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 14:39:41] 2025-10-13 12:12:11,219 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 14:39:41] 2025-10-13 12:12:11,219 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 14:39:41] 2025-10-13 12:12:11,219 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 14:39:41] 2025-10-13 12:12:11,219 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 14:39:41] 2025-10-13 12:12:11,219 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 14:39:41] 2025-10-13 12:12:11,219 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 14:39:41] 2025-10-13 12:12:11,219 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 14:39:41] 2025-10-13 12:12:11,219 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 14:39:41] 2025-10-13 12:12:11,219 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 14:39:41] 2025-10-13 12:12:11,219 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 14:39:41] 2025-10-13 12:12:11,219 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 14:39:41] 2025-10-13 12:12:11,220 | INFO     | job 6840713371 has completed (purged errors)
[2025-10-13 14:39:41] 2025-10-13 12:12:11,220 | INFO     | overall cleanup function is called
[2025-10-13 14:39:41] 2025-10-13 12:12:12,235 | INFO     | --- collectZombieJob: --- 10, [1372730]
[2025-10-13 14:39:41] 2025-10-13 12:12:12,235 | INFO     | zombie collector waiting for pid 1372730
[2025-10-13 14:39:41] 2025-10-13 12:12:12,235 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 14:39:41] 2025-10-13 12:12:12,235 | INFO     | collected zombie processes
[2025-10-13 14:39:41] 2025-10-13 12:12:12,235 | INFO     | will attempt to kill all subprocesses of pid=1372730
[2025-10-13 14:39:41] 2025-10-13 12:12:13,232 | INFO     | process IDs to be killed: [1372730] (in reverse order)
[2025-10-13 14:39:41] 2025-10-13 12:12:13,470 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 14:39:41] 2025-10-13 12:12:13,470 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 14:39:41] 2025-10-13 12:12:13,498 | INFO     | did not find any defunct processes belonging to 1372730
[2025-10-13 14:39:41] 2025-10-13 12:12:13,525 | INFO     | did not find any defunct processes belonging to 1372730
[2025-10-13 14:39:41] 2025-10-13 12:12:13,525 | INFO     | ready for new job
[2025-10-13 14:39:41] 2025-10-13 12:12:13,525 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 14:39:41] 2025-10-13 12:12:13,527 | INFO     | ***************************************
[2025-10-13 14:39:41] 2025-10-13 12:12:13,527 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 14:39:41] 2025-10-13 12:12:13,527 | INFO     | ***************************************
[2025-10-13 14:39:41] 2025-10-13 12:12:13,527 | INFO     | 
[2025-10-13 14:39:41] 2025-10-13 12:12:13,533 | INFO     | architecture information:
[2025-10-13 14:39:41] 2025-10-13 12:12:13,534 | INFO     | executing command: cat /etc/os-release
[2025-10-13 14:39:41] 2025-10-13 12:12:13,647 | INFO     | cat /etc/os-release:
[2025-10-13 14:39:41] NAME="CentOS Linux"
[2025-10-13 14:39:41] VERSION="7 (Core)"
[2025-10-13 14:39:41] ID="centos"
[2025-10-13 14:39:41] ID_LIKE="rhel fedora"
[2025-10-13 14:39:41] VERSION_ID="7"
[2025-10-13 14:39:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 14:39:41] ANSI_COLOR="0;31"
[2025-10-13 14:39:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 14:39:41] HOME_URL="https://www.centos.org/"
[2025-10-13 14:39:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 14:39:41] 
[2025-10-13 14:39:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 14:39:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 14:39:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 14:39:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 14:39:41] 
[2025-10-13 14:39:41] 2025-10-13 12:12:13,647 | INFO     | ***************************************
[2025-10-13 14:39:41] 2025-10-13 12:12:14,155 | INFO     | executing command: df -mP /scratch/.boinc/slots/0
[2025-10-13 14:39:41] 2025-10-13 12:12:14,285 | INFO     | sufficient remaining disk space (1657143296000 B)
[2025-10-13 14:39:41] 2025-10-13 12:12:14,285 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 14:39:41] 2025-10-13 12:12:14,286 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 14:39:41] 2025-10-13 12:12:14,286 | INFO     | update_server=False
[2025-10-13 14:39:41] 2025-10-13 12:12:14,286 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 14:39:41] 2025-10-13 12:12:14,522 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 14:39:41] 2025-10-13 12:12:14,522 | INFO     | aborting loop
[2025-10-13 14:39:41] 2025-10-13 12:12:14,699 | INFO     | all data control threads have been joined
[2025-10-13 14:39:41] 2025-10-13 12:12:14,754 | INFO     | all payload control threads have been joined
[2025-10-13 14:39:41] 2025-10-13 12:12:14,873 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 14:39:41] 2025-10-13 12:12:15,292 | INFO     | [job] retrieve thread has finished
[2025-10-13 14:39:41] 2025-10-13 12:12:15,370 | INFO     | [data] copytool_in thread has finished
[2025-10-13 14:39:41] 2025-10-13 12:12:15,528 | INFO     | [job] job monitor thread has finished
[2025-10-13 14:39:41] 2025-10-13 12:12:15,707 | INFO     | [data] control thread has finished
[2025-10-13 14:39:41] 2025-10-13 12:12:15,755 | INFO     | all job control threads have been joined
[2025-10-13 14:39:41] 2025-10-13 12:12:15,761 | INFO     | [payload] control thread has finished
[2025-10-13 14:39:41] 2025-10-13 12:12:15,802 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 14:39:41] 2025-10-13 12:12:15,841 | INFO     | [payload] failed_post thread has finished
[2025-10-13 14:39:41] 2025-10-13 12:12:16,033 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 14:39:41] 2025-10-13 12:12:16,058 | INFO     | [job] validate thread has finished
[2025-10-13 14:39:41] 2025-10-13 12:12:16,215 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 14:39:41] 2025-10-13 12:12:16,298 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 14:39:41] 2025-10-13 12:12:16,539 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 14:39:41] 2025-10-13 12:12:16,565 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 14:39:41] 2025-10-13 12:12:16,762 | INFO     | [job] control thread has finished
[2025-10-13 14:39:41] 2025-10-13 12:12:16,779 | INFO     | [payload] validate_post thread has finished
[2025-10-13 14:39:41] 2025-10-13 12:12:16,881 | INFO     | [data] copytool_out thread has finished
[2025-10-13 14:39:41] 2025-10-13 12:12:17,042 | INFO     | [job] queue monitor thread has finished
[2025-10-13 14:39:41] 2025-10-13 12:12:20,315 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 14:39:41] 2025-10-13 12:12:35,289 | INFO     | [monitor] cgroup control has ended
[2025-10-13 14:39:41] 2025-10-13 12:12:36,414 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139921607903040)>', '<ExcThread(monitor, started 139920505042688)>']
[2025-10-13 14:39:41] 2025-10-13 12:12:41,439 | INFO     | all workflow threads have been joined
[2025-10-13 14:39:41] 2025-10-13 12:12:41,440 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 14:39:41] 2025-10-13 12:12:41,440 | INFO     | traces error code: 0
[2025-10-13 14:39:41] 2025-10-13 12:12:41,440 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 14:39:41] 2025-10-13 12:12:45,290 | INFO     | PID=1350307 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 14:39:41] 2025-10-13 12:12:45,291 | INFO     | .. there are 84 such processes running
[2025-10-13 14:39:41] 2025-10-13 12:12:45,291 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 14:39:41] 2025-10-13 12:12:45,292 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 14:39:41] 2025-10-13 12:12:45,292 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 14:39:41] 2025-10-13 12:12:45,292 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 14:39:41] 2025-10-13 12:12:45,292 | INFO     | [monitor] control thread has ended
[2025-10-13 14:39:41] 2025-10-13 12:12:45,521 [wrapper] ==== pilot stdout END ====
[2025-10-13 14:39:41] 2025-10-13 12:12:45,556 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 14:39:41] 2025-10-13 12:12:45,580 [wrapper] pilotpid: 1350307
[2025-10-13 14:39:41] 2025-10-13 12:12:45,586 [wrapper] Pilot exit status: 0
[2025-10-13 14:39:41] 2025-10-13 12:12:45,636 [wrapper] pandaids: 6840713371
[2025-10-13 14:39:41] 2025-10-13 12:12:45,823 [wrapper] cleanup supervisor_pilot 1618934 1350308
[2025-10-13 14:39:41] 2025-10-13 12:12:45,830 [wrapper] Test setup, not cleaning
[2025-10-13 14:39:41] 2025-10-13 12:12:45,833 [wrapper] apfmon messages muted
[2025-10-13 14:39:41] 2025-10-13 12:12:45,842 [wrapper] ==== wrapper stdout END ====
[2025-10-13 14:39:41] 2025-10-13 12:12:45,862 [wrapper] ==== wrapper stderr END ====
[2025-10-13 14:39:41]  *** Error codes and diagnostics ***
[2025-10-13 14:39:41]     "exeErrorCode": 0,
[2025-10-13 14:39:41]     "exeErrorDiag": "",
[2025-10-13 14:39:41]     "pilotErrorCode": 0,
[2025-10-13 14:39:41]     "pilotErrorDiag": "",
[2025-10-13 14:39:41]  *** Listing of results directory ***
[2025-10-13 14:39:41] total 409932
[2025-10-13 14:39:41] -rw-r--r-- 1 boinc boinc    557409 Oct 12 21:28 pilot3.tar.gz
[2025-10-13 14:39:41] -rw-r--r-- 1 boinc boinc      5112 Oct 12 21:39 queuedata.json
[2025-10-13 14:39:41] -rwx------ 1 boinc boinc     36292 Oct 12 21:40 runpilot2-wrapper.sh
[2025-10-13 14:39:41] -rw-r--r-- 1 boinc boinc       100 Oct 13 13:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 14:39:41] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 13:05 run_atlas
[2025-10-13 14:39:41] -rw-r--r-- 1 boinc boinc       105 Oct 13 13:05 job.xml
[2025-10-13 14:39:41] -rw-r--r-- 1 boinc boinc      6665 Oct 13 13:05 init_data.xml
[2025-10-13 14:39:41] -rw-r--r-- 2 boinc boinc 220093146 Oct 13 13:05 EVNT.46676267._004462.pool.root.1
[2025-10-13 14:39:41] -rw-r--r-- 2 boinc boinc     15120 Oct 13 13:05 start_atlas.sh
[2025-10-13 14:39:41] drwxrwx--x 2 boinc boinc      4096 Oct 13 13:05 shared
[2025-10-13 14:39:41] -rw-r--r-- 2 boinc boinc    569680 Oct 13 13:05 input.tar.gz
[2025-10-13 14:39:41] -rw-r--r-- 1 boinc boinc         0 Oct 13 13:05 boinc_lockfile
[2025-10-13 14:39:41] -rw-r--r-- 1 boinc boinc      2550 Oct 13 13:05 pandaJob.out
[2025-10-13 14:39:41] -rw------- 1 boinc boinc    972497 Oct 13 13:06 agis_schedconf.cvmfs.json
[2025-10-13 14:39:41] -rw------- 1 boinc boinc   1560580 Oct 13 13:06 agis_ddmendpoints.agis.ALL.json
[2025-10-13 14:39:41] drwx------ 5 boinc boinc      4096 Oct 13 13:06 pilot3
[2025-10-13 14:39:41] -rw------- 1 boinc boinc 193889796 Oct 13 14:10 HITS.46676269._087693.pool.root.1
[2025-10-13 14:39:41] -rw-r--r-- 1 boinc boinc       527 Oct 13 14:10 boinc_task_state.xml
[2025-10-13 14:39:41] -rw------- 1 boinc boinc      1019 Oct 13 14:11 memory_monitor_summary.json
[2025-10-13 14:39:41] -rw------- 1 boinc boinc    375771 Oct 13 14:11 log.46676269._087693.job.log.tgz.1
[2025-10-13 14:39:41] -rw------- 1 boinc boinc      7775 Oct 13 14:12 heartbeat.json
[2025-10-13 14:39:41] -rw------- 1 boinc boinc        95 Oct 13 14:12 pilot_heartbeat.json
[2025-10-13 14:39:41] -rw------- 1 boinc boinc       823 Oct 13 14:12 pilotlog.txt
[2025-10-13 14:39:41] -rw------- 1 boinc boinc    569938 Oct 13 14:12 log.46676269._087693.job.log.1
[2025-10-13 14:39:41] -rw------- 1 boinc boinc       357 Oct 13 14:12 output.list
[2025-10-13 14:39:41] -rw-r--r-- 1 boinc boinc       620 Oct 13 14:12 runtime_log
[2025-10-13 14:39:41] -rw------- 1 boinc boinc    962560 Oct 13 14:12 result.tar.gz
[2025-10-13 14:39:41] -rw-r--r-- 1 boinc boinc      8764 Oct 13 14:12 runtime_log.err
[2025-10-13 14:39:41] -rw------- 1 boinc boinc       663 Oct 13 14:12 A3jNDms6GS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvIlNDmBVQKUn.diag
[2025-10-13 14:39:41] -rw-r--r-- 1 boinc boinc        25 Oct 13 14:39 wrapper_checkpoint.txt
[2025-10-13 14:39:41] -rw-r--r-- 1 boinc boinc      8192 Oct 13 14:39 boinc_mmap_file
[2025-10-13 14:39:41] -rw-r--r-- 1 boinc boinc     22367 Oct 13 14:39 stderr.txt
[2025-10-13 14:39:41] HITS file was successfully produced:
[2025-10-13 14:39:41] -rw------- 1 boinc boinc 193889796 Oct 13 14:10 shared/HITS.pool.root.1
[2025-10-13 14:39:41]  *** Contents of shared directory: ***
[2025-10-13 14:39:41] total 405808
[2025-10-13 14:39:41] -rw-r--r-- 2 boinc boinc 220093146 Oct 13 13:05 ATLAS.root_0
[2025-10-13 14:39:41] -rw-r--r-- 2 boinc boinc     15120 Oct 13 13:05 start_atlas.sh
[2025-10-13 14:39:41] -rw-r--r-- 2 boinc boinc    569680 Oct 13 13:05 input.tar.gz
[2025-10-13 14:39:41] -rw------- 1 boinc boinc 193889796 Oct 13 14:10 HITS.pool.root.1
[2025-10-13 14:39:41] -rw------- 1 boinc boinc    962560 Oct 13 14:12 result.tar.gz
14:39:43 (1338279): run_atlas exited; CPU time 35064.601216
14:39:43 (1338279): called boinc_finish(0)

</stderr_txt>
]]>

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