Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:58:13 (1736403): wrapper (7.7.26015): starting
22:58:13 (1736403): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 22:58:13] Arguments: --nthreads 8
[2025-10-12 22:58:13] Threads: 8
[2025-10-12 22:58:13] Checking for CVMFS
[2025-10-12 22:58:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 22:58:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 22:58:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 22:58:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 22:58:15] 2.11.5.0 2587925 130112 292064 151645 1 489 18373875 32935937 32665 16776704 0 334977657 99.647 303420191 20121 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 22:58:15] CVMFS is ok
[2025-10-12 22:58:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 22:58:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 22:58:15] Further information can be found at the LHC@home message board.
[2025-10-12 22:58:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 22:58:15] Checking for apptainer binary...
[2025-10-12 22:58:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 22:58:15] Running /usr/bin/apptainer --version
[2025-10-12 22:58:16] apptainer version 1.4.3-1.el9
[2025-10-12 22:58:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 22:58:16] c6-2-11-1.aglt2.org
[2025-10-12 22:58:16] apptainer works
[2025-10-12 22:58:16] Set ATHENA_PROC_NUMBER=8
[2025-10-12 22:58:16] Set ATHENA_CORE_NUMBER=8
[2025-10-12 22:58:17] Starting ATLAS job with PandaID=6840750455
[2025-10-12 22:58:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:41:19]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:41:19] 2025-10-13 07:40:43,087 | INFO     | time since job start (16860s) is within the limit (172800.0s)
[2025-10-13 03:41:19] 2025-10-13 07:40:43,315 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 03:41:19] 2025-10-13 07:40:43,328 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2567.5978854166665
[2025-10-13 03:41:19] 2025-10-13 07:40:43,362 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6840750455/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 03:41:19] 2025-10-13 07:40:43,363 | INFO     | extracted standard info from prmon json
[2025-10-13 03:41:19] 2025-10-13 07:40:43,364 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 03:41:19] 2025-10-13 07:40:43,364 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 03:41:19] 2025-10-13 07:40:43,364 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 03:41:19] 2025-10-13 07:40:43,364 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 03:41:19] 2025-10-13 07:40:43,371 | INFO     | fitting pss+swap vs Time
[2025-10-13 03:41:19] 2025-10-13 07:40:43,372 | INFO     | sum of square deviations: 6378819424.715297
[2025-10-13 03:41:19] 2025-10-13 07:40:43,375 | INFO     | sum of deviations: 41823149253.37961
[2025-10-13 03:41:19] 2025-10-13 07:40:43,376 | INFO     | mean x: 1760332869.109489
[2025-10-13 03:41:19] 2025-10-13 07:40:43,376 | INFO     | mean y: 2074627.3540145985
[2025-10-13 03:41:19] 2025-10-13 07:40:43,376 | INFO     | -- intersect: -11539663650.286926
[2025-10-13 03:41:19] 2025-10-13 07:40:43,376 | INFO     | intersect: -11539663650.286926
[2025-10-13 03:41:19] 2025-10-13 07:40:43,376 | INFO     | chi2: 3.092384940619474
[2025-10-13 03:41:19] 2025-10-13 07:40:43,377 | INFO     | sum of square deviations: 6035975173.79181
[2025-10-13 03:41:19] 2025-10-13 07:40:43,380 | INFO     | sum of deviations: 54087340544.40149
[2025-10-13 03:41:19] 2025-10-13 07:40:43,380 | INFO     | mean x: 1760332716.6133828
[2025-10-13 03:41:19] 2025-10-13 07:40:43,381 | INFO     | mean y: 2079983.8884758365
[2025-10-13 03:41:19] 2025-10-13 07:40:43,381 | INFO     | -- intersect: -15771960228.922287
[2025-10-13 03:41:19] 2025-10-13 07:40:43,381 | INFO     | intersect: -15771960228.922287
[2025-10-13 03:41:19] 2025-10-13 07:40:43,381 | INFO     | chi2: 2.440122338143877
[2025-10-13 03:41:19] 2025-10-13 07:40:43,381 | INFO     | current chi2=2.440122338143877 (change=21.092542325760196 %)
[2025-10-13 03:41:19] 2025-10-13 07:40:43,381 | INFO     | right removable region: 268
[2025-10-13 03:41:19] 2025-10-13 07:40:43,382 | INFO     | sum of square deviations: 6035906245.323458
[2025-10-13 03:41:19] 2025-10-13 07:40:43,385 | INFO     | sum of deviations: -8666964822.21933
[2025-10-13 03:41:19] 2025-10-13 07:40:43,385 | INFO     | mean x: 1760333021.620818
[2025-10-13 03:41:19] 2025-10-13 07:40:43,386 | INFO     | mean y: 2096985.3605947956
[2025-10-13 03:41:19] 2025-10-13 07:40:43,386 | INFO     | -- intersect: 2529761225.6061115
[2025-10-13 03:41:19] 2025-10-13 07:40:43,386 | INFO     | intersect: 2529761225.6061115
[2025-10-13 03:41:19] 2025-10-13 07:40:43,386 | INFO     | chi2: 1.0171839233237177
[2025-10-13 03:41:19] 2025-10-13 07:40:43,387 | INFO     | current chi2=1.0171839233237177 (change=67.10681422734024 %)
[2025-10-13 03:41:19] 2025-10-13 07:40:43,388 | INFO     | sum of square deviations: 5705504928.359828
[2025-10-13 03:41:19] 2025-10-13 07:40:43,390 | INFO     | sum of deviations: -12320888979.443172
[2025-10-13 03:41:19] 2025-10-13 07:40:43,390 | INFO     | mean x: 1760333174.1325758
[2025-10-13 03:41:19] 2025-10-13 07:40:43,391 | INFO     | mean y: 2098623.784090909
[2025-10-13 03:41:19] 2025-10-13 07:40:43,391 | INFO     | -- intersect: 3803492168.728975
[2025-10-13 03:41:19] 2025-10-13 07:40:43,391 | INFO     | intersect: 3803492168.728975
[2025-10-13 03:41:19] 2025-10-13 07:40:43,392 | INFO     | chi2: 0.9359928244260705
[2025-10-13 03:41:19] 2025-10-13 07:40:43,392 | INFO     | current chi2=0.9359928244260705 (change=7.981948695408963 %)
[2025-10-13 03:41:19] 2025-10-13 07:40:43,392 | INFO     | left removable region: 20
[2025-10-13 03:41:19] 2025-10-13 07:40:43,393 | INFO     | sum of square deviations: 4729684991.479849
[2025-10-13 03:41:19] 2025-10-13 07:40:43,396 | INFO     | sum of deviations: 10584228014.895163
[2025-10-13 03:41:19] 2025-10-13 07:40:43,398 | INFO     | mean x: 1760333296.1491935
[2025-10-13 03:41:19] 2025-10-13 07:40:43,399 | INFO     | mean y: 2099110.9758064514
[2025-10-13 03:41:19] 2025-10-13 07:40:43,399 | INFO     | -- intersect: -3937226451.3436055
[2025-10-13 03:41:19] 2025-10-13 07:40:43,399 | INFO     | intersect: -3937226451.3436055
[2025-10-13 03:41:19] 2025-10-13 07:40:43,399 | INFO     | chi2: 0.13045765711927987
[2025-10-13 03:41:19] 2025-10-13 07:40:43,400 | INFO     | -- intersect: -3937226451.3436055
[2025-10-13 03:41:19] 2025-10-13 07:40:43,400 | INFO     | current memory leak: 2.24 B/s (using 248 data points, chi2=0.13)
[2025-10-13 03:41:19] 2025-10-13 07:40:43,401 | INFO     | could have reported an average CPU frequency of 2550 MHz (13 samples)
[2025-10-13 03:41:19] 2025-10-13 07:40:43,401 | INFO     | ..............................
[2025-10-13 03:41:19] 2025-10-13 07:40:43,401 | INFO     | . Timing measurements:
[2025-10-13 03:41:19] 2025-10-13 07:40:43,401 | INFO     | . get job = 0 s
[2025-10-13 03:41:19] 2025-10-13 07:40:43,401 | INFO     | . initial setup = 8 s
[2025-10-13 03:41:19] 2025-10-13 07:40:43,401 | INFO     | . payload setup = 47 s
[2025-10-13 03:41:19] 2025-10-13 07:40:43,401 | INFO     | . stage-in = 0 s
[2025-10-13 03:41:19] 2025-10-13 07:40:43,401 | INFO     | . payload execution = 16705 s
[2025-10-13 03:41:19] 2025-10-13 07:40:43,402 | INFO     | . stage-out = 3 s
[2025-10-13 03:41:19] 2025-10-13 07:40:43,402 | INFO     | . log creation = 0 s
[2025-10-13 03:41:19] 2025-10-13 07:40:43,402 | INFO     | ..............................
[2025-10-13 03:41:19] 2025-10-13 07:40:43,653 | INFO     | 
[2025-10-13 03:41:19] 2025-10-13 07:40:43,653 | INFO     | job summary report
[2025-10-13 03:41:19] 2025-10-13 07:40:43,653 | INFO     | --------------------------------------------------
[2025-10-13 03:41:19] 2025-10-13 07:40:43,653 | INFO     | PanDA job id: 6840750455
[2025-10-13 03:41:19] 2025-10-13 07:40:43,653 | INFO     | task id: 46676269
[2025-10-13 03:41:19] 2025-10-13 07:40:43,654 | INFO     | errors: (none)
[2025-10-13 03:41:19] 2025-10-13 07:40:43,654 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 03:41:19] 2025-10-13 07:40:43,654 | INFO     | pilot state: finished 
[2025-10-13 03:41:19] 2025-10-13 07:40:43,654 | INFO     | transexitcode: 0
[2025-10-13 03:41:19] 2025-10-13 07:40:43,654 | INFO     | exeerrorcode: 0
[2025-10-13 03:41:19] 2025-10-13 07:40:43,654 | INFO     | exeerrordiag: 
[2025-10-13 03:41:19] 2025-10-13 07:40:43,654 | INFO     | exitcode: 0
[2025-10-13 03:41:19] 2025-10-13 07:40:43,654 | INFO     | exitmsg: OK
[2025-10-13 03:41:19] 2025-10-13 07:40:43,654 | INFO     | cpuconsumptiontime: 48603 s
[2025-10-13 03:41:19] 2025-10-13 07:40:43,654 | INFO     | nevents: 400
[2025-10-13 03:41:19] 2025-10-13 07:40:43,654 | INFO     | neventsw: 0
[2025-10-13 03:41:19] 2025-10-13 07:40:43,654 | INFO     | pid: 1753880
[2025-10-13 03:41:19] 2025-10-13 07:40:43,654 | INFO     | pgrp: 1753880
[2025-10-13 03:41:19] 2025-10-13 07:40:43,654 | INFO     | corecount: 8
[2025-10-13 03:41:19] 2025-10-13 07:40:43,655 | INFO     | event service: False
[2025-10-13 03:41:19] 2025-10-13 07:40:43,655 | INFO     | sizes: {0: 2348029, 1: 2348630, 2: 2348714, 3: 2348742, 4: 2348969, 5: 2348969, 16: 2349153, 27: 2349181, 35: 2349471, 38: 2349499, 16756: 2381043, 16757: 2381322,
[2025-10-13 03:41:19] 2025-10-13 07:40:43,655 | INFO     | --------------------------------------------------
[2025-10-13 03:41:19] 2025-10-13 07:40:43,655 | INFO     | 
[2025-10-13 03:41:19] 2025-10-13 07:40:43,655 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-13 03:41:19] 2025-10-13 07:40:43,693 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 03:41:19] 2025-10-13 07:40:43,693 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 03:41:19] 2025-10-13 07:40:43,694 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 03:41:19] 2025-10-13 07:40:43,694 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 03:41:19] 2025-10-13 07:40:43,694 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 03:41:19] 2025-10-13 07:40:43,694 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 03:41:19] 2025-10-13 07:40:43,694 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 03:41:19] 2025-10-13 07:40:43,694 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 03:41:19] 2025-10-13 07:40:43,694 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 03:41:19] 2025-10-13 07:40:43,694 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 03:41:19] 2025-10-13 07:40:43,694 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 03:41:19] 2025-10-13 07:40:43,694 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 03:41:19] 2025-10-13 07:40:43,694 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 03:41:19] 2025-10-13 07:40:43,694 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 03:41:19] 2025-10-13 07:40:43,695 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 03:41:19] 2025-10-13 07:40:43,695 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 03:41:19] 2025-10-13 07:40:43,695 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 03:41:19] 2025-10-13 07:40:43,695 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 03:41:19] 2025-10-13 07:40:43,695 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 03:41:19] 2025-10-13 07:40:43,695 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 03:41:19] 2025-10-13 07:40:43,695 | INFO     | job 6840750455 has completed (purged errors)
[2025-10-13 03:41:19] 2025-10-13 07:40:43,695 | INFO     | overall cleanup function is called
[2025-10-13 03:41:19] 2025-10-13 07:40:44,743 | INFO     | --- collectZombieJob: --- 10, [1753880]
[2025-10-13 03:41:19] 2025-10-13 07:40:44,743 | INFO     | zombie collector waiting for pid 1753880
[2025-10-13 03:41:19] 2025-10-13 07:40:44,743 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 03:41:19] 2025-10-13 07:40:44,743 | INFO     | collected zombie processes
[2025-10-13 03:41:19] 2025-10-13 07:40:44,743 | INFO     | will attempt to kill all subprocesses of pid=1753880
[2025-10-13 03:41:19] 2025-10-13 07:40:45,848 | INFO     | PID=1741209 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 03:41:19] 2025-10-13 07:40:45,850 | INFO     | .. there are 37 such processes running
[2025-10-13 03:41:19] 2025-10-13 07:40:46,064 | INFO     | process IDs to be killed: [1753880] (in reverse order)
[2025-10-13 03:41:19] 2025-10-13 07:40:46,219 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 03:41:19] 2025-10-13 07:40:46,219 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 03:41:19] 2025-10-13 07:40:46,240 | INFO     | did not find any defunct processes belonging to 1753880
[2025-10-13 03:41:19] 2025-10-13 07:40:46,259 | INFO     | did not find any defunct processes belonging to 1753880
[2025-10-13 03:41:19] 2025-10-13 07:40:46,259 | INFO     | ready for new job
[2025-10-13 03:41:19] 2025-10-13 07:40:46,260 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 03:41:19] 2025-10-13 07:40:46,262 | INFO     | ***************************************
[2025-10-13 03:41:19] 2025-10-13 07:40:46,262 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 03:41:19] 2025-10-13 07:40:46,262 | INFO     | ***************************************
[2025-10-13 03:41:19] 2025-10-13 07:40:46,262 | INFO     | 
[2025-10-13 03:41:19] 2025-10-13 07:40:46,268 | INFO     | architecture information:
[2025-10-13 03:41:19] 2025-10-13 07:40:46,269 | INFO     | executing command: cat /etc/os-release
[2025-10-13 03:41:19] 2025-10-13 07:40:46,290 | INFO     | cat /etc/os-release:
[2025-10-13 03:41:19] NAME="CentOS Linux"
[2025-10-13 03:41:19] VERSION="7 (Core)"
[2025-10-13 03:41:19] ID="centos"
[2025-10-13 03:41:19] ID_LIKE="rhel fedora"
[2025-10-13 03:41:19] VERSION_ID="7"
[2025-10-13 03:41:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 03:41:19] ANSI_COLOR="0;31"
[2025-10-13 03:41:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 03:41:19] HOME_URL="https://www.centos.org/"
[2025-10-13 03:41:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 03:41:19] 
[2025-10-13 03:41:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 03:41:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 03:41:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 03:41:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 03:41:19] 
[2025-10-13 03:41:19] 2025-10-13 07:40:46,291 | INFO     | ***************************************
[2025-10-13 03:41:19] 2025-10-13 07:40:46,795 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-13 03:41:19] 2025-10-13 07:40:46,909 | INFO     | sufficient remaining disk space (93357867008 B)
[2025-10-13 03:41:19] 2025-10-13 07:40:46,909 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 03:41:19] 2025-10-13 07:40:46,910 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 03:41:19] 2025-10-13 07:40:46,910 | INFO     | update_server=False
[2025-10-13 03:41:19] 2025-10-13 07:40:46,910 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 03:41:19] 2025-10-13 07:40:46,918 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:41:19] 2025-10-13 07:40:46,918 | INFO     | aborting loop
[2025-10-13 03:41:19] 2025-10-13 07:40:47,132 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 03:41:19] 2025-10-13 07:40:47,322 | INFO     | all payload control threads have been joined
[2025-10-13 03:41:19] 2025-10-13 07:40:47,625 | INFO     | all job control threads have been joined
[2025-10-13 03:41:19] 2025-10-13 07:40:47,803 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:41:19] 2025-10-13 07:40:47,916 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:41:19] 2025-10-13 07:40:47,924 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:41:19] 2025-10-13 07:40:47,959 | INFO     | all data control threads have been joined
[2025-10-13 03:41:19] 2025-10-13 07:40:48,270 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:41:19] 2025-10-13 07:40:48,276 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:41:19] 2025-10-13 07:40:48,329 | INFO     | [payload] control thread has finished
[2025-10-13 03:41:19] 2025-10-13 07:40:48,632 | INFO     | [job] control thread has finished
[2025-10-13 03:41:19] 2025-10-13 07:40:48,642 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:41:19] 2025-10-13 07:40:48,643 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:41:19] 2025-10-13 07:40:48,673 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:41:19] 2025-10-13 07:40:48,745 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:41:19] 2025-10-13 07:40:48,974 | INFO     | [data] control thread has finished
[2025-10-13 03:41:19] 2025-10-13 07:40:49,140 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:41:19] 2025-10-13 07:40:49,252 | INFO     | [job] validate thread has finished
[2025-10-13 03:41:19] 2025-10-13 07:40:49,257 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:41:19] 2025-10-13 07:40:49,338 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:41:19] 2025-10-13 07:40:49,682 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:41:19] 2025-10-13 07:40:51,819 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:41:19] 2025-10-13 07:41:13,134 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:41:19] 2025-10-13 07:41:13,899 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140421291501376)>', '<ExcThread(monitor, started 140420633835264)>']
[2025-10-13 03:41:19] 2025-10-13 07:41:18,754 | INFO     | PID=1741209 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 03:41:19] 2025-10-13 07:41:18,754 | INFO     | .. there are 37 such processes running
[2025-10-13 03:41:19] 2025-10-13 07:41:18,755 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:41:19] 2025-10-13 07:41:18,756 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:41:19] 2025-10-13 07:41:18,756 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:41:19] 2025-10-13 07:41:18,756 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:41:19] 2025-10-13 07:41:18,756 | INFO     | [monitor] control thread has ended
[2025-10-13 03:41:19] 2025-10-13 07:41:18,925 | INFO     | all workflow threads have been joined
[2025-10-13 03:41:19] 2025-10-13 07:41:18,926 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:41:19] 2025-10-13 07:41:18,926 | INFO     | traces error code: 0
[2025-10-13 03:41:19] 2025-10-13 07:41:18,926 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:41:19] 2025-10-13 07:41:19,267 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:41:19] 2025-10-13 07:41:19,329 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:41:19] 2025-10-13 07:41:19,335 [wrapper] pilotpid: 1741209
[2025-10-13 03:41:19] 2025-10-13 07:41:19,352 [wrapper] Pilot exit status: 0
[2025-10-13 03:41:19] 2025-10-13 07:41:19,385 [wrapper] pandaids: 6840750455
[2025-10-13 03:41:19] 2025-10-13 07:41:19,625 [wrapper] cleanup supervisor_pilot 2627067 1741210
[2025-10-13 03:41:19] 2025-10-13 07:41:19,631 [wrapper] Test setup, not cleaning
[2025-10-13 03:41:19] 2025-10-13 07:41:19,635 [wrapper] apfmon messages muted
[2025-10-13 03:41:19] 2025-10-13 07:41:19,640 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:41:19] 2025-10-13 07:41:19,647 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:41:19]  *** Error codes and diagnostics ***
[2025-10-13 03:41:20]     "exeErrorCode": 0,
[2025-10-13 03:41:20]     "exeErrorDiag": "",
[2025-10-13 03:41:20]     "pilotErrorCode": 0,
[2025-10-13 03:41:20]     "pilotErrorDiag": "",
[2025-10-13 03:41:20]  *** Listing of results directory ***
[2025-10-13 03:41:20] total 421528
[2025-10-13 03:41:20] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 17:12 pilot3.tar.gz
[2025-10-13 03:41:20] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 17:23 queuedata.json
[2025-10-13 03:41:20] -rwx------. 1 boincer umatlas     36292 Oct 12 17:24 runpilot2-wrapper.sh
[2025-10-13 03:41:20] -rw-r--r--. 1 boincer umatlas       100 Oct 12 22:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:41:20] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 22:58 run_atlas
[2025-10-13 03:41:20] -rw-r--r--. 1 boincer umatlas       105 Oct 12 22:58 job.xml
[2025-10-13 03:41:20] -rw-r--r--. 2 boincer umatlas 224181605 Oct 12 22:58 EVNT.46676267._004826.pool.root.1
[2025-10-13 03:41:20] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 22:58 input.tar.gz
[2025-10-13 03:41:20] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 22:58 start_atlas.sh
[2025-10-13 03:41:20] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 22:58 shared
[2025-10-13 03:41:20] -rw-r--r--. 1 boincer umatlas         0 Oct 12 22:58 boinc_lockfile
[2025-10-13 03:41:20] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 22:58 pandaJob.out
[2025-10-13 03:41:20] -rw-------. 1 boincer umatlas    974373 Oct 12 22:59 agis_schedconf.cvmfs.json
[2025-10-13 03:41:20] drwx------. 5 boincer umatlas      4096 Oct 12 22:59 pilot3
[2025-10-13 03:41:20] -rw-------. 1 boincer umatlas 198647984 Oct 13 03:39 HITS.46676269._089827.pool.root.1
[2025-10-13 03:41:20] -rw-r--r--. 1 boincer umatlas       530 Oct 13 03:39 boinc_task_state.xml
[2025-10-13 03:41:20] -rw-------. 1 boincer umatlas      1044 Oct 13 03:40 memory_monitor_summary.json
[2025-10-13 03:41:20] -rw-------. 1 boincer umatlas   1560580 Oct 13 03:40 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:41:20] -rw-------. 1 boincer umatlas    475967 Oct 13 03:40 log.46676269._089827.job.log.tgz.1
[2025-10-13 03:41:20] -rw-------. 1 boincer umatlas      7827 Oct 13 03:40 heartbeat.json
[2025-10-13 03:41:20] -rw-r--r--. 1 boincer umatlas      6857 Oct 13 03:40 init_data.xml
[2025-10-13 03:41:20] -rw-r--r--. 1 boincer umatlas        27 Oct 13 03:41 wrapper_checkpoint.txt
[2025-10-13 03:41:20] -rw-------. 1 boincer umatlas        95 Oct 13 03:41 pilot_heartbeat.json
[2025-10-13 03:41:20] -rw-------. 1 boincer umatlas      4824 Oct 13 03:41 pilotlog.txt
[2025-10-13 03:41:20] -rw-------. 1 boincer umatlas   1978432 Oct 13 03:41 log.46676269._089827.job.log.1
[2025-10-13 03:41:20] -rw-------. 1 boincer umatlas       357 Oct 13 03:41 output.list
[2025-10-13 03:41:20] -rw-r--r--. 1 boincer umatlas       620 Oct 13 03:41 runtime_log
[2025-10-13 03:41:20] -rw-------. 1 boincer umatlas   2478080 Oct 13 03:41 result.tar.gz
[2025-10-13 03:41:20] -rw-------. 1 boincer umatlas       656 Oct 13 03:41 TPXLDm1iIS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVelNDm28Jy2m.diag
[2025-10-13 03:41:20] -rw-r--r--. 1 boincer umatlas      8709 Oct 13 03:41 runtime_log.err
[2025-10-13 03:41:20] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 03:41 boinc_mmap_file
[2025-10-13 03:41:20] -rw-r--r--. 1 boincer umatlas     21322 Oct 13 03:41 stderr.txt
[2025-10-13 03:41:20] HITS file was successfully produced:
[2025-10-13 03:41:20] -rw-------. 1 boincer umatlas 198647984 Oct 13 03:39 shared/HITS.pool.root.1
[2025-10-13 03:41:20]  *** Contents of shared directory: ***
[2025-10-13 03:41:20] total 415924
[2025-10-13 03:41:20] -rw-r--r--. 2 boincer umatlas 224181605 Oct 12 22:58 ATLAS.root_0
[2025-10-13 03:41:20] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 22:58 input.tar.gz
[2025-10-13 03:41:20] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 22:58 start_atlas.sh
[2025-10-13 03:41:20] -rw-------. 1 boincer umatlas 198647984 Oct 13 03:39 HITS.pool.root.1
[2025-10-13 03:41:20] -rw-------. 1 boincer umatlas   2478080 Oct 13 03:41 result.tar.gz
03:41:42 (1736403): run_atlas exited; CPU time 49377.671238
03:41:42 (1736403): called boinc_finish(0)

</stderr_txt>
]]>

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