Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:53:34 (3254538): wrapper (7.7.26015): starting
23:53:34 (3254538): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 23:53:34] Arguments: --nthreads 8
[2025-10-12 23:53:34] Threads: 8
[2025-10-12 23:53:34] Checking for CVMFS
[2025-10-12 23:53:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 23:53:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 23:53:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 23:53:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 23:53:36] 2.13.2.0 1908877 100041 313396 151647 2 219 30081589 32947201 27158 16776704 0 273926861 99.630 265318790 20688 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 23:53:36] CVMFS is ok
[2025-10-12 23:53:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 23:53:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 23:53:36] Further information can be found at the LHC@home message board.
[2025-10-12 23:53:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 23:53:36] Checking for apptainer binary...
[2025-10-12 23:53:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 23:53:36] Running /usr/bin/apptainer --version
[2025-10-12 23:53:36] apptainer version 1.4.3-1.el9
[2025-10-12 23:53:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 23:53:36] c6-6-8-1.aglt2.org
[2025-10-12 23:53:36] apptainer works
[2025-10-12 23:53:36] Set ATHENA_PROC_NUMBER=8
[2025-10-12 23:53:36] Set ATHENA_CORE_NUMBER=8
[2025-10-12 23:53:36] Starting ATLAS job with PandaID=6840750511
[2025-10-12 23:53:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:03:38]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:03:38] 2025-10-13 10:03:03,771 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 06:03:38] 2025-10-13 10:03:03,842 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2625.005010416668
[2025-10-13 06:03:38] 2025-10-13 10:03:03,888 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6840750511/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 06:03:38] 2025-10-13 10:03:03,893 | INFO     | extracted standard info from prmon json
[2025-10-13 06:03:38] 2025-10-13 10:03:03,893 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 06:03:38] 2025-10-13 10:03:03,893 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 06:03:38] 2025-10-13 10:03:03,894 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 06:03:38] 2025-10-13 10:03:03,894 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 06:03:38] 2025-10-13 10:03:03,903 | INFO     | fitting pss+swap vs Time
[2025-10-13 06:03:38] 2025-10-13 10:03:03,904 | INFO     | sum of square deviations: 14466338023.955542
[2025-10-13 06:03:38] 2025-10-13 10:03:03,911 | INFO     | sum of deviations: 168988615844.93317
[2025-10-13 06:03:38] 2025-10-13 10:03:03,912 | INFO     | mean x: 1760338777.211111
[2025-10-13 06:03:38] 2025-10-13 10:03:03,912 | INFO     | mean y: 2107146.066666667
[2025-10-13 06:03:38] 2025-10-13 10:03:03,912 | INFO     | -- intersect: -20561301014.75885
[2025-10-13 06:03:38] 2025-10-13 10:03:03,912 | INFO     | intersect: -20561301014.75885
[2025-10-13 06:03:38] 2025-10-13 10:03:03,912 | INFO     | chi2: 3.4060456794531784
[2025-10-13 06:03:38] 2025-10-13 10:03:03,917 | INFO     | sum of square deviations: 13871949141.391613
[2025-10-13 06:03:38] 2025-10-13 10:03:03,920 | INFO     | sum of deviations: 188177280950.5746
[2025-10-13 06:03:38] 2025-10-13 10:03:03,930 | INFO     | mean x: 1760338624.7211268
[2025-10-13 06:03:38] 2025-10-13 10:03:03,930 | INFO     | mean y: 2112009.7633802816
[2025-10-13 06:03:38] 2025-10-13 10:03:03,930 | INFO     | -- intersect: -23877425939.513187
[2025-10-13 06:03:38] 2025-10-13 10:03:03,930 | INFO     | intersect: -23877425939.513187
[2025-10-13 06:03:38] 2025-10-13 10:03:03,931 | INFO     | chi2: 2.6169661223531566
[2025-10-13 06:03:38] 2025-10-13 10:03:03,931 | INFO     | current chi2=2.6169661223531566 (change=23.167028024906116 %)
[2025-10-13 06:03:38] 2025-10-13 10:03:03,931 | INFO     | right removable region: 354
[2025-10-13 06:03:38] 2025-10-13 10:03:03,931 | INFO     | sum of square deviations: 13871792981.391619
[2025-10-13 06:03:38] 2025-10-13 10:03:03,934 | INFO     | sum of deviations: 96372620738.67334
[2025-10-13 06:03:38] 2025-10-13 10:03:03,934 | INFO     | mean x: 1760338929.7211268
[2025-10-13 06:03:38] 2025-10-13 10:03:03,934 | INFO     | mean y: 2125723.0169014083
[2025-10-13 06:03:38] 2025-10-13 10:03:03,934 | INFO     | -- intersect: -12227618209.372519
[2025-10-13 06:03:38] 2025-10-13 10:03:03,935 | INFO     | intersect: -12227618209.372519
[2025-10-13 06:03:38] 2025-10-13 10:03:03,935 | INFO     | chi2: 1.2239589638383621
[2025-10-13 06:03:38] 2025-10-13 10:03:03,935 | INFO     | current chi2=1.2239589638383621 (change=64.06510425794225 %)
[2025-10-13 06:03:38] 2025-10-13 10:03:03,936 | INFO     | sum of square deviations: 13293825208.617102
[2025-10-13 06:03:38] 2025-10-13 10:03:03,943 | INFO     | sum of deviations: 70669492266.3314
[2025-10-13 06:03:38] 2025-10-13 10:03:03,943 | INFO     | mean x: 1760339082.2228572
[2025-10-13 06:03:38] 2025-10-13 10:03:03,943 | INFO     | mean y: 2132511.5085714287
[2025-10-13 06:03:38] 2025-10-13 10:03:03,943 | INFO     | -- intersect: -9355766152.348629
[2025-10-13 06:03:38] 2025-10-13 10:03:03,943 | INFO     | intersect: -9355766152.348629
[2025-10-13 06:03:38] 2025-10-13 10:03:03,943 | INFO     | chi2: 1.021892068435197
[2025-10-13 06:03:38] 2025-10-13 10:03:03,944 | INFO     | current chi2=1.021892068435197 (change=16.509286779474927 %)
[2025-10-13 06:03:38] 2025-10-13 10:03:03,944 | INFO     | left removable region: 20
[2025-10-13 06:03:38] 2025-10-13 10:03:03,944 | INFO     | sum of square deviations: 11552684022.838316
[2025-10-13 06:03:38] 2025-10-13 10:03:03,951 | INFO     | sum of deviations: 68615906234.35927
[2025-10-13 06:03:38] 2025-10-13 10:03:03,951 | INFO     | mean x: 1760339204.239521
[2025-10-13 06:03:38] 2025-10-13 10:03:03,951 | INFO     | mean y: 2143692.745508982
[2025-10-13 06:03:38] 2025-10-13 10:03:03,951 | INFO     | -- intersect: -10453198939.32018
[2025-10-13 06:03:38] 2025-10-13 10:03:03,951 | INFO     | intersect: -10453198939.32018
[2025-10-13 06:03:38] 2025-10-13 10:03:03,952 | INFO     | chi2: 0.14317797776265434
[2025-10-13 06:03:38] 2025-10-13 10:03:03,952 | INFO     | -- intersect: -10453198939.32018
[2025-10-13 06:03:38] 2025-10-13 10:03:03,952 | INFO     | current memory leak: 5.94 B/s (using 334 data points, chi2=0.14)
[2025-10-13 06:03:38] 2025-10-13 10:03:03,952 | INFO     | could have reported an average CPU frequency of 2588 MHz (15 samples)
[2025-10-13 06:03:38] 2025-10-13 10:03:03,953 | INFO     | ..............................
[2025-10-13 06:03:38] 2025-10-13 10:03:03,957 | INFO     | . Timing measurements:
[2025-10-13 06:03:38] 2025-10-13 10:03:03,957 | INFO     | . get job = 0 s
[2025-10-13 06:03:38] 2025-10-13 10:03:03,957 | INFO     | . initial setup = 6 s
[2025-10-13 06:03:38] 2025-10-13 10:03:03,957 | INFO     | . payload setup = 42 s
[2025-10-13 06:03:38] 2025-10-13 10:03:03,957 | INFO     | . stage-in = 0 s
[2025-10-13 06:03:38] 2025-10-13 10:03:03,957 | INFO     | . payload execution = 21947 s
[2025-10-13 06:03:38] 2025-10-13 10:03:03,957 | INFO     | . stage-out = 4 s
[2025-10-13 06:03:38] 2025-10-13 10:03:03,957 | INFO     | . log creation = 1 s
[2025-10-13 06:03:38] 2025-10-13 10:03:03,958 | INFO     | ..............................
[2025-10-13 06:03:38] 2025-10-13 10:03:04,233 | INFO     | 
[2025-10-13 06:03:38] 2025-10-13 10:03:04,233 | INFO     | job summary report
[2025-10-13 06:03:38] 2025-10-13 10:03:04,233 | INFO     | --------------------------------------------------
[2025-10-13 06:03:38] 2025-10-13 10:03:04,233 | INFO     | PanDA job id: 6840750511
[2025-10-13 06:03:38] 2025-10-13 10:03:04,233 | INFO     | task id: 46676269
[2025-10-13 06:03:38] 2025-10-13 10:03:04,233 | INFO     | errors: (none)
[2025-10-13 06:03:38] 2025-10-13 10:03:04,233 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 06:03:38] 2025-10-13 10:03:04,233 | INFO     | pilot state: finished 
[2025-10-13 06:03:38] 2025-10-13 10:03:04,234 | INFO     | transexitcode: 0
[2025-10-13 06:03:38] 2025-10-13 10:03:04,234 | INFO     | exeerrorcode: 0
[2025-10-13 06:03:38] 2025-10-13 10:03:04,234 | INFO     | exeerrordiag: 
[2025-10-13 06:03:38] 2025-10-13 10:03:04,234 | INFO     | exitcode: 0
[2025-10-13 06:03:38] 2025-10-13 10:03:04,234 | INFO     | exitmsg: OK
[2025-10-13 06:03:38] 2025-10-13 10:03:04,234 | INFO     | cpuconsumptiontime: 45977 s
[2025-10-13 06:03:38] 2025-10-13 10:03:04,234 | INFO     | nevents: 400
[2025-10-13 06:03:38] 2025-10-13 10:03:04,234 | INFO     | neventsw: 0
[2025-10-13 06:03:38] 2025-10-13 10:03:04,234 | INFO     | pid: 3312194
[2025-10-13 06:03:38] 2025-10-13 10:03:04,234 | INFO     | pgrp: 3312194
[2025-10-13 06:03:38] 2025-10-13 10:03:04,234 | INFO     | corecount: 8
[2025-10-13 06:03:38] 2025-10-13 10:03:04,234 | INFO     | event service: False
[2025-10-13 06:03:38] 2025-10-13 10:03:04,234 | INFO     | sizes: {0: 2348630, 1: 2348885, 2: 2348885, 13: 2348913, 25: 2348969, 36: 2349415, 21994: 2383087, 21999: 2392085, 22002: 2392141, 22029: 2392335}
[2025-10-13 06:03:38] 2025-10-13 10:03:04,234 | INFO     | --------------------------------------------------
[2025-10-13 06:03:38] 2025-10-13 10:03:04,237 | INFO     | 
[2025-10-13 06:03:38] 2025-10-13 10:03:04,237 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 06:03:38] 2025-10-13 10:03:04,305 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 06:03:38] 2025-10-13 10:03:04,306 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 06:03:38] 2025-10-13 10:03:04,306 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 06:03:38] 2025-10-13 10:03:04,306 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 06:03:38] 2025-10-13 10:03:04,306 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 06:03:38] 2025-10-13 10:03:04,306 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 06:03:38] 2025-10-13 10:03:04,306 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 06:03:38] 2025-10-13 10:03:04,306 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 06:03:38] 2025-10-13 10:03:04,306 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 06:03:38] 2025-10-13 10:03:04,306 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 06:03:38] 2025-10-13 10:03:04,306 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 06:03:38] 2025-10-13 10:03:04,306 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 06:03:38] 2025-10-13 10:03:04,306 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 06:03:38] 2025-10-13 10:03:04,307 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 06:03:38] 2025-10-13 10:03:04,307 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 06:03:38] 2025-10-13 10:03:04,307 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 06:03:38] 2025-10-13 10:03:04,307 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 06:03:38] 2025-10-13 10:03:04,307 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 06:03:38] 2025-10-13 10:03:04,307 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 06:03:38] 2025-10-13 10:03:04,307 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 06:03:38] 2025-10-13 10:03:04,307 | INFO     | job 6840750511 has completed (purged errors)
[2025-10-13 06:03:38] 2025-10-13 10:03:04,307 | INFO     | overall cleanup function is called
[2025-10-13 06:03:38] 2025-10-13 10:03:04,742 | INFO     | PID=3277460 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 06:03:38] 2025-10-13 10:03:04,742 | INFO     | .. there are 34 such processes running
[2025-10-13 06:03:38] 2025-10-13 10:03:05,371 | INFO     | --- collectZombieJob: --- 10, [3312194]
[2025-10-13 06:03:38] 2025-10-13 10:03:05,371 | INFO     | zombie collector waiting for pid 3312194
[2025-10-13 06:03:38] 2025-10-13 10:03:05,371 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 06:03:38] 2025-10-13 10:03:05,371 | INFO     | collected zombie processes
[2025-10-13 06:03:38] 2025-10-13 10:03:05,371 | INFO     | will attempt to kill all subprocesses of pid=3312194
[2025-10-13 06:03:38] 2025-10-13 10:03:06,169 | INFO     | process IDs to be killed: [3312194] (in reverse order)
[2025-10-13 06:03:38] 2025-10-13 10:03:06,378 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 06:03:38] 2025-10-13 10:03:06,378 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:03:38] 2025-10-13 10:03:06,469 | INFO     | did not find any defunct processes belonging to 3312194
[2025-10-13 06:03:38] 2025-10-13 10:03:06,573 | INFO     | did not find any defunct processes belonging to 3312194
[2025-10-13 06:03:38] 2025-10-13 10:03:06,573 | INFO     | ready for new job
[2025-10-13 06:03:38] 2025-10-13 10:03:06,573 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:03:38] 2025-10-13 10:03:06,580 | INFO     | ***************************************
[2025-10-13 06:03:38] 2025-10-13 10:03:06,580 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:03:38] 2025-10-13 10:03:06,581 | INFO     | ***************************************
[2025-10-13 06:03:38] 2025-10-13 10:03:06,581 | INFO     | 
[2025-10-13 06:03:38] 2025-10-13 10:03:06,604 | INFO     | architecture information:
[2025-10-13 06:03:38] 2025-10-13 10:03:06,605 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:03:38] 2025-10-13 10:03:06,636 | INFO     | cat /etc/os-release:
[2025-10-13 06:03:38] NAME="CentOS Linux"
[2025-10-13 06:03:38] VERSION="7 (Core)"
[2025-10-13 06:03:38] ID="centos"
[2025-10-13 06:03:38] ID_LIKE="rhel fedora"
[2025-10-13 06:03:38] VERSION_ID="7"
[2025-10-13 06:03:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:03:38] ANSI_COLOR="0;31"
[2025-10-13 06:03:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:03:38] HOME_URL="https://www.centos.org/"
[2025-10-13 06:03:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:03:38] 
[2025-10-13 06:03:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:03:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:03:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:03:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:03:38] 
[2025-10-13 06:03:38] 2025-10-13 10:03:06,636 | INFO     | ***************************************
[2025-10-13 06:03:38] 2025-10-13 10:03:07,140 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 06:03:38] 2025-10-13 10:03:07,207 | INFO     | sufficient remaining disk space (74324115456 B)
[2025-10-13 06:03:38] 2025-10-13 10:03:07,207 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:03:38] 2025-10-13 10:03:07,207 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:03:38] 2025-10-13 10:03:07,208 | INFO     | update_server=False
[2025-10-13 06:03:38] 2025-10-13 10:03:07,208 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:03:38] 2025-10-13 10:03:07,208 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:03:38] 2025-10-13 10:03:07,208 | INFO     | aborting loop
[2025-10-13 06:03:38] 2025-10-13 10:03:07,208 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:03:38] 2025-10-13 10:03:07,404 | INFO     | all payload control threads have been joined
[2025-10-13 06:03:38] 2025-10-13 10:03:07,593 | INFO     | all data control threads have been joined
[2025-10-13 06:03:38] 2025-10-13 10:03:07,758 | INFO     | all job control threads have been joined
[2025-10-13 06:03:38] 2025-10-13 10:03:08,216 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:03:38] 2025-10-13 10:03:08,217 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:03:38] 2025-10-13 10:03:08,262 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:03:38] 2025-10-13 10:03:08,407 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:03:38] 2025-10-13 10:03:08,410 | INFO     | [payload] control thread has finished
[2025-10-13 06:03:38] 2025-10-13 10:03:08,599 | INFO     | [data] control thread has finished
[2025-10-13 06:03:38] 2025-10-13 10:03:08,743 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:03:38] 2025-10-13 10:03:08,764 | INFO     | [job] control thread has finished
[2025-10-13 06:03:38] 2025-10-13 10:03:08,956 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:03:38] 2025-10-13 10:03:09,201 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:03:38] 2025-10-13 10:03:09,231 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:03:38] 2025-10-13 10:03:09,317 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:03:38] 2025-10-13 10:03:09,463 | INFO     | [job] validate thread has finished
[2025-10-13 06:03:38] 2025-10-13 10:03:09,463 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:03:38] 2025-10-13 10:03:09,805 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:03:38] 2025-10-13 10:03:10,207 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:03:38] 2025-10-13 10:03:13,814 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:03:38] 2025-10-13 10:03:17,996 | INFO     | job.realtimelogging is not enabled
[2025-10-13 06:03:38] 2025-10-13 10:03:19,002 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:03:38] 2025-10-13 10:03:30,293 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:03:38] 2025-10-13 10:03:32,250 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140078918510400)>', '<ExcThread(monitor, started 140078185694976)>']
[2025-10-13 06:03:38] 2025-10-13 10:03:37,276 | INFO     | all workflow threads have been joined
[2025-10-13 06:03:38] 2025-10-13 10:03:37,276 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:03:38] 2025-10-13 10:03:37,276 | INFO     | traces error code: 0
[2025-10-13 06:03:38] 2025-10-13 10:03:37,276 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:03:38] 2025-10-13 10:03:37,442 | INFO     | PID=3277460 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 06:03:38] 2025-10-13 10:03:37,442 | INFO     | .. there are 34 such processes running
[2025-10-13 06:03:38] 2025-10-13 10:03:37,442 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:03:38] 2025-10-13 10:03:37,442 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:03:38] 2025-10-13 10:03:37,442 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:03:38] 2025-10-13 10:03:37,442 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:03:38] 2025-10-13 10:03:37,443 | INFO     | [monitor] control thread has ended
[2025-10-13 06:03:38] 2025-10-13 10:03:37,627 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:03:38] 2025-10-13 10:03:37,630 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:03:38] 2025-10-13 10:03:37,633 [wrapper] pilotpid: 3277460
[2025-10-13 06:03:38] 2025-10-13 10:03:37,635 [wrapper] Pilot exit status: 0
[2025-10-13 06:03:38] 2025-10-13 10:03:37,681 [wrapper] pandaids: 6840750511
[2025-10-13 06:03:38] 2025-10-13 10:03:38,081 [wrapper] cleanup supervisor_pilot  300652 3277461
[2025-10-13 06:03:38] 2025-10-13 10:03:38,094 [wrapper] Test setup, not cleaning
[2025-10-13 06:03:38] 2025-10-13 10:03:38,110 [wrapper] apfmon messages muted
[2025-10-13 06:03:38] 2025-10-13 10:03:38,189 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:03:38] 2025-10-13 10:03:38,200 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:03:38]  *** Error codes and diagnostics ***
[2025-10-13 06:03:38]     "exeErrorCode": 0,
[2025-10-13 06:03:38]     "exeErrorDiag": "",
[2025-10-13 06:03:38]     "pilotErrorCode": 0,
[2025-10-13 06:03:38]     "pilotErrorDiag": "",
[2025-10-13 06:03:38]  *** Listing of results directory ***
[2025-10-13 06:03:38] total 420468
[2025-10-13 06:03:38] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 17:12 pilot3.tar.gz
[2025-10-13 06:03:38] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 17:23 queuedata.json
[2025-10-13 06:03:38] -rwx------ 1 boincer umatlas     36292 Oct 12 17:24 runpilot2-wrapper.sh
[2025-10-13 06:03:38] -rw-r--r-- 1 boincer umatlas       100 Oct 12 23:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:03:38] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 23:53 run_atlas
[2025-10-13 06:03:38] -rw-r--r-- 1 boincer umatlas       105 Oct 12 23:53 job.xml
[2025-10-13 06:03:38] -rw-r--r-- 2 boincer umatlas 223978105 Oct 12 23:53 EVNT.46676267._004828.pool.root.1
[2025-10-13 06:03:38] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 23:53 start_atlas.sh
[2025-10-13 06:03:38] drwxrwx--x 2 boincer umatlas      4096 Oct 12 23:53 shared
[2025-10-13 06:03:38] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 23:53 input.tar.gz
[2025-10-13 06:03:38] -rw-r--r-- 1 boincer umatlas         0 Oct 12 23:53 boinc_lockfile
[2025-10-13 06:03:38] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 23:53 pandaJob.out
[2025-10-13 06:03:38] -rw------- 1 boincer umatlas    974373 Oct 12 23:54 agis_schedconf.cvmfs.json
[2025-10-13 06:03:38] drwx------ 5 boincer umatlas      4096 Oct 12 23:54 pilot3
[2025-10-13 06:03:38] -rw-r--r-- 1 boincer umatlas      6858 Oct 13 05:56 init_data.xml
[2025-10-13 06:03:38] -rw------- 1 boincer umatlas 196391024 Oct 13 06:01 HITS.46676269._089883.pool.root.1
[2025-10-13 06:03:38] -rw-r--r-- 1 boincer umatlas       531 Oct 13 06:01 boinc_task_state.xml
[2025-10-13 06:03:38] -rw------- 1 boincer umatlas      1043 Oct 13 06:02 memory_monitor_summary.json
[2025-10-13 06:03:38] -rw------- 1 boincer umatlas   1560580 Oct 13 06:02 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:03:38] -rw------- 1 boincer umatlas    546311 Oct 13 06:02 log.46676269._089883.job.log.tgz.1
[2025-10-13 06:03:38] -rw------- 1 boincer umatlas        95 Oct 13 06:02 pilot_heartbeat.json
[2025-10-13 06:03:38] -rw------- 1 boincer umatlas      7827 Oct 13 06:03 heartbeat.json
[2025-10-13 06:03:38] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 06:03 boinc_mmap_file
[2025-10-13 06:03:38] -rw-r--r-- 1 boincer umatlas        28 Oct 13 06:03 wrapper_checkpoint.txt
[2025-10-13 06:03:38] -rw------- 1 boincer umatlas       823 Oct 13 06:03 pilotlog.txt
[2025-10-13 06:03:38] -rw------- 1 boincer umatlas   2593402 Oct 13 06:03 log.46676269._089883.job.log.1
[2025-10-13 06:03:38] -rw------- 1 boincer umatlas       357 Oct 13 06:03 output.list
[2025-10-13 06:03:38] -rw-r--r-- 1 boincer umatlas       620 Oct 13 06:03 runtime_log
[2025-10-13 06:03:38] -rw------- 1 boincer umatlas   3164160 Oct 13 06:03 result.tar.gz
[2025-10-13 06:03:38] -rw------- 1 boincer umatlas       655 Oct 13 06:03 tGiNDmfjIS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0elNDm2EGRYo.diag
[2025-10-13 06:03:38] -rw-r--r-- 1 boincer umatlas      8704 Oct 13 06:03 runtime_log.err
[2025-10-13 06:03:38] -rw-r--r-- 1 boincer umatlas     21279 Oct 13 06:03 stderr.txt
[2025-10-13 06:03:38] HITS file was successfully produced:
[2025-10-13 06:03:38] -rw------- 1 boincer umatlas 196391024 Oct 13 06:01 shared/HITS.pool.root.1
[2025-10-13 06:03:38]  *** Contents of shared directory: ***
[2025-10-13 06:03:38] total 414200
[2025-10-13 06:03:38] -rw-r--r-- 2 boincer umatlas 223978105 Oct 12 23:53 ATLAS.root_0
[2025-10-13 06:03:38] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 23:53 start_atlas.sh
[2025-10-13 06:03:38] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 23:53 input.tar.gz
[2025-10-13 06:03:38] -rw------- 1 boincer umatlas 196391024 Oct 13 06:01 HITS.pool.root.1
[2025-10-13 06:03:38] -rw------- 1 boincer umatlas   3164160 Oct 13 06:03 result.tar.gz
06:03:40 (3254538): run_atlas exited; CPU time 47098.155943
06:03:40 (3254538): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN