Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:58:50 (1632077): wrapper (7.7.26015): starting
22:58:50 (1632077): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 22:58:50] Arguments: --nthreads 8
[2025-10-12 22:58:50] Threads: 8
[2025-10-12 22:58:50] Checking for CVMFS
[2025-10-12 22:58:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 22:58:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 22:58:51] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 22:58:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 22:58:52] 2.13.2.0 4499 51139 142444 151645 3 26 25581618 40960001 9017 16776704 0 43895148 99.783 25353113 37868 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 22:58:52] CVMFS is ok
[2025-10-12 22:58:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 22:58:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 22:58:52] Further information can be found at the LHC@home message board.
[2025-10-12 22:58:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 22:58:52] Checking for apptainer binary...
[2025-10-12 22:58:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 22:58:52] Running /usr/bin/apptainer --version
[2025-10-12 22:58:52] apptainer version 1.4.3-1.el9
[2025-10-12 22:58:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 22:58:52] c-211-8.aglt2.org
[2025-10-12 22:58:52] apptainer works
[2025-10-12 22:58:52] Set ATHENA_PROC_NUMBER=8
[2025-10-12 22:58:52] Set ATHENA_CORE_NUMBER=8
[2025-10-12 22:58:52] Starting ATLAS job with PandaID=6840834580
[2025-10-12 22:58:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:46:26]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:46:26] 2025-10-13 09:45:29,544 | INFO     | PID=1638524 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 05:46:26] 2025-10-13 09:45:29,544 | INFO     | .. there are 9 such processes running
[2025-10-13 05:46:26] 2025-10-13 09:45:29,964 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 05:46:26] 2025-10-13 09:45:29,979 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2483.5716874999994
[2025-10-13 05:46:26] 2025-10-13 09:45:29,994 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6840834580/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 05:46:26] 2025-10-13 09:45:29,995 | INFO     | extracted standard info from prmon json
[2025-10-13 05:46:26] 2025-10-13 09:45:29,995 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 05:46:26] 2025-10-13 09:45:29,995 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 05:46:26] 2025-10-13 09:45:30,009 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 05:46:26] 2025-10-13 09:45:30,009 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:46:26] 2025-10-13 09:45:30,022 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:46:26] 2025-10-13 09:45:30,023 | INFO     | sum of square deviations: 19403859790.574287
[2025-10-13 05:46:26] 2025-10-13 09:45:30,048 | INFO     | sum of deviations: 86807218904.93195
[2025-10-13 05:46:26] 2025-10-13 09:45:30,049 | INFO     | mean x: 1760336606.0327456
[2025-10-13 05:46:26] 2025-10-13 09:45:30,049 | INFO     | mean y: 2490067.8513853904
[2025-10-13 05:46:26] 2025-10-13 09:45:30,049 | INFO     | -- intersect: -7872743352.484871
[2025-10-13 05:46:26] 2025-10-13 09:45:30,049 | INFO     | intersect: -7872743352.484871
[2025-10-13 05:46:26] 2025-10-13 09:45:30,050 | INFO     | chi2: 2.7767645359281645
[2025-10-13 05:46:26] 2025-10-13 09:45:30,051 | INFO     | sum of square deviations: 18680101495.17348
[2025-10-13 05:46:26] 2025-10-13 09:45:30,055 | INFO     | sum of deviations: 109838801466.62743
[2025-10-13 05:46:26] 2025-10-13 09:45:30,056 | INFO     | mean x: 1760336453.5459185
[2025-10-13 05:46:26] 2025-10-13 09:45:30,057 | INFO     | mean y: 2494867.548469388
[2025-10-13 05:46:26] 2025-10-13 09:45:30,057 | INFO     | -- intersect: -10348265072.67216
[2025-10-13 05:46:26] 2025-10-13 09:45:30,057 | INFO     | intersect: -10348265072.67216
[2025-10-13 05:46:26] 2025-10-13 09:45:30,058 | INFO     | chi2: 2.0928635320614166
[2025-10-13 05:46:26] 2025-10-13 09:45:30,058 | INFO     | current chi2=2.0928635320614166 (change=24.629420140521436 %)
[2025-10-13 05:46:26] 2025-10-13 09:45:30,058 | INFO     | right removable region: 391
[2025-10-13 05:46:26] 2025-10-13 09:45:30,059 | INFO     | sum of square deviations: 18679875491.262745
[2025-10-13 05:46:26] 2025-10-13 09:45:30,063 | INFO     | sum of deviations: 1528908294.3698997
[2025-10-13 05:46:26] 2025-10-13 09:45:30,064 | INFO     | mean x: 1760336758.5433674
[2025-10-13 05:46:26] 2025-10-13 09:45:30,064 | INFO     | mean y: 2507966.0076530613
[2025-10-13 05:46:26] 2025-10-13 09:45:30,064 | INFO     | -- intersect: -141571873.9398905
[2025-10-13 05:46:26] 2025-10-13 09:45:30,064 | INFO     | intersect: -141571873.9398905
[2025-10-13 05:46:26] 2025-10-13 09:45:30,065 | INFO     | chi2: 0.7246285808352214
[2025-10-13 05:46:26] 2025-10-13 09:45:30,065 | INFO     | current chi2=0.7246285808352214 (change=73.90385207462302 %)
[2025-10-13 05:46:26] 2025-10-13 09:45:30,066 | INFO     | sum of square deviations: 17974148126.96632
[2025-10-13 05:46:26] 2025-10-13 09:45:30,078 | INFO     | sum of deviations: -3663001316.555565
[2025-10-13 05:46:26] 2025-10-13 09:45:30,078 | INFO     | mean x: 1760336911.0516796
[2025-10-13 05:46:26] 2025-10-13 09:45:30,079 | INFO     | mean y: 2509076.777777778
[2025-10-13 05:46:26] 2025-10-13 09:45:30,079 | INFO     | -- intersect: 361253000.3960357
[2025-10-13 05:46:26] 2025-10-13 09:45:30,079 | INFO     | intersect: 361253000.3960357
[2025-10-13 05:46:26] 2025-10-13 09:45:30,080 | INFO     | chi2: 0.7075190044828242
[2025-10-13 05:46:26] 2025-10-13 09:45:30,080 | INFO     | current chi2=0.7075190044828242 (change=2.361151189023809 %)
[2025-10-13 05:46:26] 2025-10-13 09:45:30,080 | INFO     | left removable region: 20
[2025-10-13 05:46:26] 2025-10-13 09:45:30,081 | INFO     | sum of square deviations: 15835783592.506737
[2025-10-13 05:46:26] 2025-10-13 09:45:30,129 | INFO     | sum of deviations: 14371211345.584911
[2025-10-13 05:46:26] 2025-10-13 09:45:30,171 | INFO     | mean x: 1760337033.097035
[2025-10-13 05:46:26] 2025-10-13 09:45:30,171 | INFO     | mean y: 2515513.6226415094
[2025-10-13 05:46:26] 2025-10-13 09:45:30,171 | INFO     | -- intersect: -1595016771.0486467
[2025-10-13 05:46:26] 2025-10-13 09:45:30,172 | INFO     | intersect: -1595016771.0486467
[2025-10-13 05:46:26] 2025-10-13 09:45:30,172 | INFO     | chi2: 0.0042049631832221206
[2025-10-13 05:46:26] 2025-10-13 09:45:30,173 | INFO     | -- intersect: -1595016771.0486467
[2025-10-13 05:46:26] 2025-10-13 09:45:30,173 | INFO     | current memory leak: 0.91 B/s (using 371 data points, chi2=0.00)
[2025-10-13 05:46:26] 2025-10-13 09:45:30,174 | INFO     | could have reported an average CPU frequency of 2445 MHz (17 samples)
[2025-10-13 05:46:26] 2025-10-13 09:45:30,174 | INFO     | ..............................
[2025-10-13 05:46:26] 2025-10-13 09:45:30,174 | INFO     | . Timing measurements:
[2025-10-13 05:46:26] 2025-10-13 09:45:30,174 | INFO     | . get job = 0 s
[2025-10-13 05:46:26] 2025-10-13 09:45:30,174 | INFO     | . initial setup = 4 s
[2025-10-13 05:46:26] 2025-10-13 09:45:30,174 | INFO     | . payload setup = 42 s
[2025-10-13 05:46:26] 2025-10-13 09:45:30,216 | INFO     | . stage-in = 0 s
[2025-10-13 05:46:26] 2025-10-13 09:45:30,216 | INFO     | . payload execution = 24194 s
[2025-10-13 05:46:26] 2025-10-13 09:45:30,216 | INFO     | . stage-out = 3 s
[2025-10-13 05:46:26] 2025-10-13 09:45:30,216 | INFO     | . log creation = 0 s
[2025-10-13 05:46:26] 2025-10-13 09:45:30,216 | INFO     | ..............................
[2025-10-13 05:46:26] 2025-10-13 09:45:30,562 | INFO     | time since job start (24336s) is within the limit (172800.0s)
[2025-10-13 05:46:26] 2025-10-13 09:45:30,677 | INFO     | 
[2025-10-13 05:46:26] 2025-10-13 09:45:30,677 | INFO     | job summary report
[2025-10-13 05:46:26] 2025-10-13 09:45:30,677 | INFO     | --------------------------------------------------
[2025-10-13 05:46:26] 2025-10-13 09:45:30,677 | INFO     | PanDA job id: 6840834580
[2025-10-13 05:46:26] 2025-10-13 09:45:30,677 | INFO     | task id: 46676269
[2025-10-13 05:46:26] 2025-10-13 09:45:30,678 | INFO     | errors: (none)
[2025-10-13 05:46:26] 2025-10-13 09:45:30,678 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:46:26] 2025-10-13 09:45:30,678 | INFO     | pilot state: finished 
[2025-10-13 05:46:26] 2025-10-13 09:45:30,678 | INFO     | transexitcode: 0
[2025-10-13 05:46:26] 2025-10-13 09:45:30,678 | INFO     | exeerrorcode: 0
[2025-10-13 05:46:26] 2025-10-13 09:45:30,678 | INFO     | exeerrordiag: 
[2025-10-13 05:46:26] 2025-10-13 09:45:30,678 | INFO     | exitcode: 0
[2025-10-13 05:46:26] 2025-10-13 09:45:30,679 | INFO     | exitmsg: OK
[2025-10-13 05:46:26] 2025-10-13 09:45:30,679 | INFO     | cpuconsumptiontime: 61037 s
[2025-10-13 05:46:26] 2025-10-13 09:45:30,679 | INFO     | nevents: 400
[2025-10-13 05:46:26] 2025-10-13 09:45:30,679 | INFO     | neventsw: 0
[2025-10-13 05:46:26] 2025-10-13 09:45:30,679 | INFO     | pid: 1647777
[2025-10-13 05:46:26] 2025-10-13 09:45:30,679 | INFO     | pgrp: 1647777
[2025-10-13 05:46:26] 2025-10-13 09:45:30,679 | INFO     | corecount: 8
[2025-10-13 05:46:26] 2025-10-13 09:45:30,680 | INFO     | event service: False
[2025-10-13 05:46:26] 2025-10-13 09:45:30,680 | INFO     | sizes: {0: 2348634, 1: 2348833, 12: 2348833, 23: 2348861, 29: 2349151, 34: 2349179, 24241: 2384409, 24246: 2393463, 24273: 2393665}
[2025-10-13 05:46:26] 2025-10-13 09:45:30,680 | INFO     | --------------------------------------------------
[2025-10-13 05:46:26] 2025-10-13 09:45:30,680 | INFO     | 
[2025-10-13 05:46:26] 2025-10-13 09:45:30,680 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 05:46:26] 2025-10-13 09:45:30,731 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:46:26] 2025-10-13 09:45:30,731 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:46:26] 2025-10-13 09:45:30,732 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:46:26] 2025-10-13 09:45:30,732 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:46:26] 2025-10-13 09:45:30,732 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:46:26] 2025-10-13 09:45:30,732 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:46:26] 2025-10-13 09:45:30,732 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:46:26] 2025-10-13 09:45:30,732 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:46:26] 2025-10-13 09:45:30,732 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:46:26] 2025-10-13 09:45:30,733 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:46:26] 2025-10-13 09:45:30,733 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:46:26] 2025-10-13 09:45:30,733 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:46:26] 2025-10-13 09:45:30,733 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:46:26] 2025-10-13 09:45:30,733 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:46:26] 2025-10-13 09:45:30,733 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:46:26] 2025-10-13 09:45:30,733 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:46:26] 2025-10-13 09:45:30,733 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:46:26] 2025-10-13 09:45:30,734 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:46:26] 2025-10-13 09:45:30,734 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:46:26] 2025-10-13 09:45:30,734 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:46:26] 2025-10-13 09:45:30,734 | INFO     | job 6840834580 has completed (purged errors)
[2025-10-13 05:46:26] 2025-10-13 09:45:30,734 | INFO     | overall cleanup function is called
[2025-10-13 05:46:26] 2025-10-13 09:45:31,746 | INFO     | --- collectZombieJob: --- 10, [1647777]
[2025-10-13 05:46:26] 2025-10-13 09:45:31,746 | INFO     | zombie collector waiting for pid 1647777
[2025-10-13 05:46:26] 2025-10-13 09:45:31,746 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:46:26] 2025-10-13 09:45:31,746 | INFO     | collected zombie processes
[2025-10-13 05:46:26] 2025-10-13 09:45:31,746 | INFO     | will attempt to kill all subprocesses of pid=1647777
[2025-10-13 05:46:26] 2025-10-13 09:45:32,381 | INFO     | process IDs to be killed: [1647777] (in reverse order)
[2025-10-13 05:46:26] 2025-10-13 09:45:32,588 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:46:26] 2025-10-13 09:45:32,588 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:46:26] 2025-10-13 09:45:32,599 | INFO     | did not find any defunct processes belonging to 1647777
[2025-10-13 05:46:26] 2025-10-13 09:45:32,609 | INFO     | did not find any defunct processes belonging to 1647777
[2025-10-13 05:46:26] 2025-10-13 09:45:32,609 | INFO     | ready for new job
[2025-10-13 05:46:26] 2025-10-13 09:45:32,610 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:46:26] 2025-10-13 09:45:32,613 | INFO     | ***************************************
[2025-10-13 05:46:26] 2025-10-13 09:45:32,613 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:46:26] 2025-10-13 09:45:32,613 | INFO     | ***************************************
[2025-10-13 05:46:26] 2025-10-13 09:45:32,613 | INFO     | 
[2025-10-13 05:46:26] 2025-10-13 09:45:32,616 | INFO     | architecture information:
[2025-10-13 05:46:26] 2025-10-13 09:45:32,617 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:46:26] 2025-10-13 09:45:32,639 | INFO     | cat /etc/os-release:
[2025-10-13 05:46:26] NAME="CentOS Linux"
[2025-10-13 05:46:26] VERSION="7 (Core)"
[2025-10-13 05:46:26] ID="centos"
[2025-10-13 05:46:26] ID_LIKE="rhel fedora"
[2025-10-13 05:46:26] VERSION_ID="7"
[2025-10-13 05:46:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:46:26] ANSI_COLOR="0;31"
[2025-10-13 05:46:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:46:26] HOME_URL="https://www.centos.org/"
[2025-10-13 05:46:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:46:26] 
[2025-10-13 05:46:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:46:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:46:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:46:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:46:26] 
[2025-10-13 05:46:26] 2025-10-13 09:45:32,639 | INFO     | ***************************************
[2025-10-13 05:46:26] 2025-10-13 09:45:33,143 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 05:46:26] 2025-10-13 09:45:33,199 | INFO     | sufficient remaining disk space (62390272000 B)
[2025-10-13 05:46:26] 2025-10-13 09:45:33,200 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:46:26] 2025-10-13 09:45:33,200 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:46:26] 2025-10-13 09:45:33,200 | INFO     | update_server=False
[2025-10-13 05:46:26] 2025-10-13 09:45:33,200 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:46:26] 2025-10-13 09:45:33,210 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:46:26] 2025-10-13 09:45:33,430 | INFO     | all payload control threads have been joined
[2025-10-13 05:46:26] 2025-10-13 09:45:33,884 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:46:26] 2025-10-13 09:45:33,994 | INFO     | all data control threads have been joined
[2025-10-13 05:46:26] 2025-10-13 09:45:34,074 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:46:26] 2025-10-13 09:45:34,074 | INFO     | aborting loop
[2025-10-13 05:46:26] 2025-10-13 09:45:34,206 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:46:26] 2025-10-13 09:45:34,358 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:46:26] 2025-10-13 09:45:34,391 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:46:26] 2025-10-13 09:45:34,436 | INFO     | [payload] control thread has finished
[2025-10-13 05:46:26] 2025-10-13 09:45:34,699 | INFO     | all job control threads have been joined
[2025-10-13 05:46:26] 2025-10-13 09:45:34,766 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:46:26] 2025-10-13 09:45:34,798 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:46:26] 2025-10-13 09:45:35,000 | INFO     | [data] control thread has finished
[2025-10-13 05:46:26] 2025-10-13 09:45:35,055 | INFO     | [job] validate thread has finished
[2025-10-13 05:46:26] 2025-10-13 09:45:35,072 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:46:26] 2025-10-13 09:45:35,078 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:46:26] 2025-10-13 09:45:35,107 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:46:26] 2025-10-13 09:45:35,587 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:46:26] 2025-10-13 09:45:35,693 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:46:26] 2025-10-13 09:45:35,704 | INFO     | [job] control thread has finished
[2025-10-13 05:46:26] 2025-10-13 09:45:35,891 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:46:26] 2025-10-13 09:45:36,699 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:46:26] 2025-10-13 09:45:37,219 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:46:26] 2025-10-13 09:45:38,368 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:46:26] 2025-10-13 09:45:39,489 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140208539662144)>', '<ExcThread(monitor, started 140208041346816)>']
[2025-10-13 05:46:26] 2025-10-13 09:45:44,515 | INFO     | all workflow threads have been joined
[2025-10-13 05:46:26] 2025-10-13 09:45:44,515 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:46:26] 2025-10-13 09:45:44,515 | INFO     | traces error code: 0
[2025-10-13 05:46:26] 2025-10-13 09:45:44,516 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:46:26] 2025-10-13 09:46:05,301 | INFO     | PID=1638524 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 05:46:26] 2025-10-13 09:46:05,301 | INFO     | .. there are 9 such processes running
[2025-10-13 05:46:26] 2025-10-13 09:46:05,302 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:46:26] 2025-10-13 09:46:05,302 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:46:26] 2025-10-13 09:46:05,302 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:46:26] 2025-10-13 09:46:05,302 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:46:26] 2025-10-13 09:46:05,302 | INFO     | [monitor] control thread has ended
[2025-10-13 05:46:26] 2025-10-13 09:46:05,843 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:46:26] 2025-10-13 09:46:05,894 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:46:26] 2025-10-13 09:46:05,939 [wrapper] pilotpid: 1638524
[2025-10-13 05:46:26] 2025-10-13 09:46:05,981 [wrapper] Pilot exit status: 0
[2025-10-13 05:46:26] 2025-10-13 09:46:06,252 [wrapper] pandaids: 6840834580
[2025-10-13 05:46:26] 2025-10-13 09:46:06,505 [wrapper] cleanup supervisor_pilot 2233411 1638525
[2025-10-13 05:46:26] 2025-10-13 09:46:06,522 [wrapper] Test setup, not cleaning
[2025-10-13 05:46:26] 2025-10-13 09:46:06,537 [wrapper] apfmon messages muted
[2025-10-13 05:46:26] 2025-10-13 09:46:06,542 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:46:26] 2025-10-13 09:46:06,547 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:46:26]  *** Error codes and diagnostics ***
[2025-10-13 05:46:26]     "exeErrorCode": 0,
[2025-10-13 05:46:26]     "exeErrorDiag": "",
[2025-10-13 05:46:26]     "pilotErrorCode": 0,
[2025-10-13 05:46:26]     "pilotErrorDiag": "",
[2025-10-13 05:46:26]  *** Listing of results directory ***
[2025-10-13 05:46:26] total 407176
[2025-10-13 05:46:26] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 17:31 pilot3.tar.gz
[2025-10-13 05:46:26] -rwx------. 1 boincer umatlas     36292 Oct 12 17:36 runpilot2-wrapper.sh
[2025-10-13 05:46:26] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 17:36 queuedata.json
[2025-10-13 05:46:26] -rw-r--r--. 1 boincer umatlas       100 Oct 12 22:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:46:26] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 22:58 run_atlas
[2025-10-13 05:46:26] -rw-r--r--. 1 boincer umatlas       105 Oct 12 22:58 job.xml
[2025-10-13 05:46:26] -rw-r--r--. 2 boincer umatlas 221374834 Oct 12 22:58 EVNT.46676267._000618.pool.root.1
[2025-10-13 05:46:26] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 22:58 start_atlas.sh
[2025-10-13 05:46:26] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 22:58 shared
[2025-10-13 05:46:26] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 22:58 input.tar.gz
[2025-10-13 05:46:26] -rw-r--r--. 1 boincer umatlas         0 Oct 12 22:58 boinc_lockfile
[2025-10-13 05:46:26] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 22:58 pandaJob.out
[2025-10-13 05:46:26] -rw-------. 1 boincer umatlas    974373 Oct 12 22:59 agis_schedconf.cvmfs.json
[2025-10-13 05:46:26] drwx------. 5 boincer umatlas      4096 Oct 12 22:59 pilot3
[2025-10-13 05:46:26] -rw-r--r--. 1 boincer umatlas      6612 Oct 13 05:39 init_data.xml
[2025-10-13 05:46:26] -rw-------. 1 boincer umatlas 184399877 Oct 13 05:43 HITS.46676269._090173.pool.root.1
[2025-10-13 05:46:26] -rw-r--r--. 1 boincer umatlas       531 Oct 13 05:43 boinc_task_state.xml
[2025-10-13 05:46:26] -rw-------. 1 boincer umatlas      1052 Oct 13 05:44 memory_monitor_summary.json
[2025-10-13 05:46:26] -rw-------. 1 boincer umatlas   1560580 Oct 13 05:45 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:46:26] -rw-------. 1 boincer umatlas    590622 Oct 13 05:45 log.46676269._090173.job.log.tgz.1
[2025-10-13 05:46:26] -rw-------. 1 boincer umatlas        95 Oct 13 05:45 pilot_heartbeat.json
[2025-10-13 05:46:26] -rw-------. 1 boincer umatlas      7845 Oct 13 05:45 heartbeat.json
[2025-10-13 05:46:26] -rw-------. 1 boincer umatlas       822 Oct 13 05:46 pilotlog.txt
[2025-10-13 05:46:26] -rw-------. 1 boincer umatlas   3049802 Oct 13 05:46 log.46676269._090173.job.log.1
[2025-10-13 05:46:26] -rw-------. 1 boincer umatlas       357 Oct 13 05:46 output.list
[2025-10-13 05:46:26] -rw-r--r--. 1 boincer umatlas       620 Oct 13 05:46 runtime_log
[2025-10-13 05:46:26] -rw-------. 1 boincer umatlas   3655680 Oct 13 05:46 result.tar.gz
[2025-10-13 05:46:26] -rw-------. 1 boincer umatlas       660 Oct 13 05:46 VBdKDmWvIS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFilNDmUpmJDn.diag
[2025-10-13 05:46:26] -rw-r--r--. 1 boincer umatlas      8699 Oct 13 05:46 runtime_log.err
[2025-10-13 05:46:26] -rw-r--r--. 1 boincer umatlas        28 Oct 13 05:46 wrapper_checkpoint.txt
[2025-10-13 05:46:26] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 05:46 boinc_mmap_file
[2025-10-13 05:46:26] -rw-r--r--. 1 boincer umatlas     21284 Oct 13 05:46 stderr.txt
[2025-10-13 05:46:26] HITS file was successfully produced:
[2025-10-13 05:46:26] -rw-------. 1 boincer umatlas 184399877 Oct 13 05:43 shared/HITS.pool.root.1
[2025-10-13 05:46:26]  *** Contents of shared directory: ***
[2025-10-13 05:46:26] total 400420
[2025-10-13 05:46:26] -rw-r--r--. 2 boincer umatlas 221374834 Oct 12 22:58 ATLAS.root_0
[2025-10-13 05:46:26] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 22:58 start_atlas.sh
[2025-10-13 05:46:26] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 22:58 input.tar.gz
[2025-10-13 05:46:26] -rw-------. 1 boincer umatlas 184399877 Oct 13 05:43 HITS.pool.root.1
[2025-10-13 05:46:26] -rw-------. 1 boincer umatlas   3655680 Oct 13 05:46 result.tar.gz
05:46:28 (1632077): run_atlas exited; CPU time 61727.506903
05:46:28 (1632077): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN