Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:37:23 (1030434): wrapper (7.7.26015): starting
21:37:23 (1030434): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 21:37:23] Arguments: --nthreads 8
[2025-10-12 21:37:23] Threads: 8
[2025-10-12 21:37:23] Checking for CVMFS
[2025-10-12 21:37:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 21:37:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 21:37:24] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 21:37:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 21:37:25] 2.13.2.0 342865 28051 116404 151643 3 385 33468036 40960000 31548 16776704 0 209560409 99.774 117781393 46531 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 21:37:25] CVMFS is ok
[2025-10-12 21:37:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 21:37:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 21:37:25] Further information can be found at the LHC@home message board.
[2025-10-12 21:37:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:37:25] Checking for apptainer binary...
[2025-10-12 21:37:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 21:37:25] Running /usr/bin/apptainer --version
[2025-10-12 21:37:25] apptainer version 1.4.3-1.el9
[2025-10-12 21:37:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:37:25] c-208-36.aglt2.org
[2025-10-12 21:37:25] apptainer works
[2025-10-12 21:37:25] Set ATHENA_PROC_NUMBER=8
[2025-10-12 21:37:25] Set ATHENA_CORE_NUMBER=8
[2025-10-12 21:37:25] Starting ATLAS job with PandaID=6840749485
[2025-10-12 21:37:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:22:56]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:22:56] 2025-10-13 03:21:24,728 | INFO     | monitor loop #389: job 0:6840749485 is in state 'finished'
[2025-10-12 23:22:56] 2025-10-13 03:21:24,729 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:22:56] 2025-10-13 03:21:25,705 | INFO     | time since job start (6186s) is within the limit (172800.0s)
[2025-10-12 23:22:56] 2025-10-13 03:21:27,232 | INFO     | monitor loop #390: job 0:6840749485 is in state 'finished'
[2025-10-12 23:22:56] 2025-10-13 03:21:27,233 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:22:56] 2025-10-13 03:21:27,712 | INFO     | time since job start (6188s) is within the limit (172800.0s)
[2025-10-12 23:22:56] 2025-10-13 03:21:29,719 | INFO     | time since job start (6190s) is within the limit (172800.0s)
[2025-10-12 23:22:56] 2025-10-13 03:21:29,750 | INFO     | monitor loop #391: job 0:6840749485 is in state 'finished'
[2025-10-12 23:22:56] 2025-10-13 03:21:29,751 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:22:56] 2025-10-13 03:21:31,726 | INFO     | time since job start (6192s) is within the limit (172800.0s)
[2025-10-12 23:22:56] 2025-10-13 03:21:32,255 | INFO     | monitor loop #392: job 0:6840749485 is in state 'finished'
[2025-10-12 23:22:56] 2025-10-13 03:21:32,256 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:22:56] 2025-10-13 03:21:33,694 | INFO     | PID=1041181 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 23:22:56] 2025-10-13 03:21:33,695 | INFO     | .. there are 32 such processes running
[2025-10-12 23:22:56] 2025-10-13 03:21:34,695 | INFO     | time since job start (6195s) is within the limit (172800.0s)
[2025-10-12 23:22:56] 2025-10-13 03:21:34,763 | INFO     | monitor loop #393: job 0:6840749485 is in state 'finished'
[2025-10-12 23:22:56] 2025-10-13 03:21:34,764 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:22:56] 2025-10-13 03:21:36,702 | INFO     | time since job start (6197s) is within the limit (172800.0s)
[2025-10-12 23:22:56] 2025-10-13 03:21:37,268 | INFO     | monitor loop #394: job 0:6840749485 is in state 'finished'
[2025-10-12 23:22:56] 2025-10-13 03:21:37,269 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:22:56] 2025-10-13 03:21:38,715 | INFO     | time since job start (6199s) is within the limit (172800.0s)
[2025-10-12 23:22:56] 2025-10-13 03:21:39,773 | INFO     | monitor loop #395: job 0:6840749485 is in state 'finished'
[2025-10-12 23:22:56] 2025-10-13 03:21:39,774 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:22:56] 2025-10-13 03:21:40,722 | INFO     | time since job start (6201s) is within the limit (172800.0s)
[2025-10-12 23:22:56] 2025-10-13 03:21:42,278 | INFO     | monitor loop #396: job 0:6840749485 is in state 'finished'
[2025-10-12 23:22:56] 2025-10-13 03:21:42,279 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:22:56] 2025-10-13 03:21:42,729 | INFO     | time since job start (6203s) is within the limit (172800.0s)
[2025-10-12 23:22:56] 2025-10-13 03:21:44,771 | INFO     | time since job start (6205s) is within the limit (172800.0s)
[2025-10-12 23:22:56] 2025-10-13 03:21:44,783 | INFO     | monitor loop #397: job 0:6840749485 is in state 'finished'
[2025-10-12 23:22:56] 2025-10-13 03:21:44,784 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:22:56] 2025-10-13 03:21:46,777 | INFO     | time since job start (6207s) is within the limit (172800.0s)
[2025-10-12 23:22:56] 2025-10-13 03:21:47,287 | INFO     | monitor loop #398: job 0:6840749485 is in state 'finished'
[2025-10-12 23:22:56] 2025-10-13 03:21:47,288 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:22:56] 2025-10-13 03:21:48,784 | INFO     | time since job start (6209s) is within the limit (172800.0s)
[2025-10-12 23:22:56] 2025-10-13 03:21:49,325 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 23:22:56] 2025-10-13 03:21:49,354 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3747.9350859374995
[2025-10-12 23:22:56] 2025-10-13 03:21:49,406 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6840749485/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 23:22:56] 2025-10-13 03:21:49,407 | INFO     | extracted standard info from prmon json
[2025-10-12 23:22:56] 2025-10-13 03:21:49,407 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 23:22:56] 2025-10-13 03:21:49,407 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 23:22:56] 2025-10-13 03:21:49,408 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 23:22:56] 2025-10-13 03:21:49,408 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:22:56] 2025-10-13 03:21:49,424 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:22:56] 2025-10-13 03:21:49,424 | INFO     | sum of square deviations: 241429038.60869613
[2025-10-12 23:22:56] 2025-10-13 03:21:49,425 | INFO     | sum of deviations: -818474144.9565222
[2025-10-12 23:22:56] 2025-10-13 03:21:49,425 | INFO     | mean x: 1760322735.5652175
[2025-10-12 23:22:56] 2025-10-13 03:21:49,425 | INFO     | mean y: 2509095.0760869565
[2025-10-12 23:22:56] 2025-10-13 03:21:49,425 | INFO     | -- intersect: 5970219748.865567
[2025-10-12 23:22:56] 2025-10-13 03:21:49,425 | INFO     | intersect: 5970219748.865567
[2025-10-12 23:22:56] 2025-10-13 03:21:49,425 | INFO     | chi2: 0.06735312919398091
[2025-10-12 23:22:56] 2025-10-13 03:21:49,425 | INFO     | -- intersect: 5970219748.865567
[2025-10-12 23:22:56] 2025-10-13 03:21:49,425 | INFO     | current memory leak: -3.39 B/s (using 92 data points, chi2=0.07)
[2025-10-12 23:22:56] 2025-10-13 03:21:49,426 | INFO     | could have reported an average CPU frequency of 3761 MHz (7 samples)
[2025-10-12 23:22:56] 2025-10-13 03:21:49,426 | INFO     | ..............................
[2025-10-12 23:22:56] 2025-10-13 03:21:49,426 | INFO     | . Timing measurements:
[2025-10-12 23:22:56] 2025-10-13 03:21:49,426 | INFO     | . get job = 0 s
[2025-10-12 23:22:56] 2025-10-13 03:21:49,426 | INFO     | . initial setup = 4 s
[2025-10-12 23:22:56] 2025-10-13 03:21:49,426 | INFO     | . payload setup = 46 s
[2025-10-12 23:22:56] 2025-10-13 03:21:49,426 | INFO     | . stage-in = 0 s
[2025-10-12 23:22:56] 2025-10-13 03:21:49,426 | INFO     | . payload execution = 6051 s
[2025-10-12 23:22:56] 2025-10-13 03:21:49,426 | INFO     | . stage-out = 3 s
[2025-10-12 23:22:56] 2025-10-13 03:21:49,426 | INFO     | . log creation = 0 s
[2025-10-12 23:22:56] 2025-10-13 03:21:49,426 | INFO     | ..............................
[2025-10-12 23:22:56] 2025-10-13 03:21:49,813 | INFO     | 
[2025-10-12 23:22:56] 2025-10-13 03:21:49,814 | INFO     | job summary report
[2025-10-12 23:22:56] 2025-10-13 03:21:49,814 | INFO     | --------------------------------------------------
[2025-10-12 23:22:56] 2025-10-13 03:21:49,814 | INFO     | PanDA job id: 6840749485
[2025-10-12 23:22:56] 2025-10-13 03:21:49,814 | INFO     | task id: 46676269
[2025-10-12 23:22:56] 2025-10-13 03:21:49,814 | INFO     | errors: (none)
[2025-10-12 23:22:56] 2025-10-13 03:21:49,814 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:22:56] 2025-10-13 03:21:49,814 | INFO     | pilot state: finished 
[2025-10-12 23:22:56] 2025-10-13 03:21:49,814 | INFO     | transexitcode: 0
[2025-10-12 23:22:56] 2025-10-13 03:21:49,814 | INFO     | exeerrorcode: 0
[2025-10-12 23:22:56] 2025-10-13 03:21:49,814 | INFO     | exeerrordiag: 
[2025-10-12 23:22:56] 2025-10-13 03:21:49,814 | INFO     | exitcode: 0
[2025-10-12 23:22:56] 2025-10-13 03:21:49,814 | INFO     | exitmsg: OK
[2025-10-12 23:22:56] 2025-10-13 03:21:49,814 | INFO     | cpuconsumptiontime: 25008 s
[2025-10-12 23:22:56] 2025-10-13 03:21:49,814 | INFO     | nevents: 400
[2025-10-12 23:22:56] 2025-10-13 03:21:49,814 | INFO     | neventsw: 0
[2025-10-12 23:22:56] 2025-10-13 03:21:49,814 | INFO     | pid: 1076288
[2025-10-12 23:22:56] 2025-10-13 03:21:49,814 | INFO     | pgrp: 1076288
[2025-10-12 23:22:56] 2025-10-13 03:21:49,814 | INFO     | corecount: 8
[2025-10-12 23:22:56] 2025-10-13 03:21:49,814 | INFO     | event service: False
[2025-10-12 23:22:56] 2025-10-13 03:21:49,814 | INFO     | sizes: {0: 2348579, 1: 2348663, 2: 2348862, 3: 2348862, 14: 2348890, 24: 2348918, 33: 2349336, 35: 2349392, 6098: 2376151, 6102: 2385149, 6104: 2385205, 6142: 2385
[2025-10-12 23:22:56] 2025-10-13 03:21:49,814 | INFO     | --------------------------------------------------
[2025-10-12 23:22:56] 2025-10-13 03:21:49,814 | INFO     | 
[2025-10-12 23:22:56] 2025-10-13 03:21:49,815 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 23:22:56] 2025-10-13 03:21:49,976 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:22:56] 2025-10-13 03:21:49,976 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:22:56] 2025-10-13 03:21:49,976 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:22:56] 2025-10-13 03:21:49,976 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:22:56] 2025-10-13 03:21:49,976 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:22:56] 2025-10-13 03:21:49,976 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:22:56] 2025-10-13 03:21:49,976 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:22:56] 2025-10-13 03:21:49,976 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:22:56] 2025-10-13 03:21:49,976 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:22:56] 2025-10-13 03:21:49,976 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:22:56] 2025-10-13 03:21:49,976 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:22:56] 2025-10-13 03:21:49,976 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:22:56] 2025-10-13 03:21:49,976 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:22:56] 2025-10-13 03:21:49,977 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:22:56] 2025-10-13 03:21:49,977 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:22:56] 2025-10-13 03:21:49,977 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:22:56] 2025-10-13 03:21:49,977 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:22:56] 2025-10-13 03:21:49,977 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:22:56] 2025-10-13 03:21:49,977 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:22:56] 2025-10-13 03:21:49,977 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:22:56] 2025-10-13 03:21:49,977 | INFO     | job 6840749485 has completed (purged errors)
[2025-10-12 23:22:56] 2025-10-13 03:21:49,977 | INFO     | overall cleanup function is called
[2025-10-12 23:22:56] 2025-10-13 03:21:50,986 | INFO     | --- collectZombieJob: --- 10, [1076288]
[2025-10-12 23:22:56] 2025-10-13 03:21:50,987 | INFO     | zombie collector waiting for pid 1076288
[2025-10-12 23:22:56] 2025-10-13 03:21:50,987 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:22:56] 2025-10-13 03:21:50,987 | INFO     | collected zombie processes
[2025-10-12 23:22:56] 2025-10-13 03:21:50,987 | INFO     | will attempt to kill all subprocesses of pid=1076288
[2025-10-12 23:22:56] 2025-10-13 03:21:53,167 | INFO     | process IDs to be killed: [1076288] (in reverse order)
[2025-10-12 23:22:56] 2025-10-13 03:21:53,333 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:22:56] 2025-10-13 03:21:53,334 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:22:56] 2025-10-13 03:21:53,442 | INFO     | did not find any defunct processes belonging to 1076288
[2025-10-12 23:22:56] 2025-10-13 03:21:53,571 | INFO     | did not find any defunct processes belonging to 1076288
[2025-10-12 23:22:56] 2025-10-13 03:21:53,572 | INFO     | ready for new job
[2025-10-12 23:22:56] 2025-10-13 03:21:53,572 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:22:56] 2025-10-13 03:21:53,573 | INFO     | ***************************************
[2025-10-12 23:22:56] 2025-10-13 03:21:53,573 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:22:56] 2025-10-13 03:21:53,574 | INFO     | ***************************************
[2025-10-12 23:22:56] 2025-10-13 03:21:53,574 | INFO     | 
[2025-10-12 23:22:56] 2025-10-13 03:21:53,611 | INFO     | architecture information:
[2025-10-12 23:22:56] 2025-10-13 03:21:53,615 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:22:56] 2025-10-13 03:21:53,710 | INFO     | cat /etc/os-release:
[2025-10-12 23:22:56] NAME="CentOS Linux"
[2025-10-12 23:22:56] VERSION="7 (Core)"
[2025-10-12 23:22:56] ID="centos"
[2025-10-12 23:22:56] ID_LIKE="rhel fedora"
[2025-10-12 23:22:56] VERSION_ID="7"
[2025-10-12 23:22:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:22:56] ANSI_COLOR="0;31"
[2025-10-12 23:22:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:22:56] HOME_URL="https://www.centos.org/"
[2025-10-12 23:22:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:22:56] 
[2025-10-12 23:22:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:22:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:22:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:22:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:22:56] 
[2025-10-12 23:22:56] 2025-10-13 03:21:53,711 | INFO     | ***************************************
[2025-10-12 23:22:56] 2025-10-13 03:21:54,243 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 23:22:56] 2025-10-13 03:21:54,333 | INFO     | sufficient remaining disk space (169775988736 B)
[2025-10-12 23:22:56] 2025-10-13 03:21:54,333 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:22:56] 2025-10-13 03:21:54,333 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:22:56] 2025-10-13 03:21:54,333 | INFO     | update_server=False
[2025-10-12 23:22:56] 2025-10-13 03:21:54,334 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:22:56] 2025-10-13 03:21:54,339 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:22:56] 2025-10-13 03:21:54,377 | INFO     | all data control threads have been joined
[2025-10-12 23:22:56] 2025-10-13 03:21:54,784 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:22:56] 2025-10-13 03:21:54,808 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 23:22:56] 2025-10-13 03:21:54,809 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 23:22:56] 2025-10-13 03:21:54,809 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:22:56] 2025-10-13 03:21:54,809 | INFO     | will abort loop
[2025-10-12 23:22:56] 2025-10-13 03:21:55,326 | INFO     | all job control threads have been joined
[2025-10-12 23:22:56] 2025-10-13 03:21:55,336 | INFO     | all payload control threads have been joined
[2025-10-12 23:22:56] 2025-10-13 03:21:55,340 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:22:56] 2025-10-13 03:21:55,383 | INFO     | [data] control thread has finished
[2025-10-12 23:22:56] 2025-10-13 03:21:55,432 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:22:56] 2025-10-13 03:21:55,516 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:22:56] 2025-10-13 03:21:55,790 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:22:56] 2025-10-13 03:21:55,792 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:22:56] 2025-10-13 03:21:55,806 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:22:56] 2025-10-13 03:21:55,814 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:22:56] 2025-10-13 03:21:55,995 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:22:56] 2025-10-13 03:21:56,332 | INFO     | [job] control thread has finished
[2025-10-12 23:22:56] 2025-10-13 03:21:56,342 | INFO     | [payload] control thread has finished
[2025-10-12 23:22:56] 2025-10-13 03:21:56,370 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:22:56] 2025-10-13 03:21:56,371 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:22:56] 2025-10-13 03:21:56,380 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:22:56] 2025-10-13 03:21:56,432 | INFO     | [job] validate thread has finished
[2025-10-12 23:22:56] 2025-10-13 03:21:57,808 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:22:56] 2025-10-13 03:21:58,348 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:22:56] 2025-10-13 03:22:22,840 | INFO     | PID=1041181 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 23:22:56] 2025-10-13 03:22:22,840 | INFO     | .. there are 30 such processes running
[2025-10-12 23:22:56] 2025-10-13 03:22:22,841 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:22:56] 2025-10-13 03:22:22,841 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:22:56] 2025-10-13 03:22:22,841 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:22:56] 2025-10-13 03:22:28,990 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:22:56] 2025-10-13 03:22:29,911 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139789831874368)>', '<ExcThread(monitor, started 139789458183936)>']
[2025-10-12 23:22:56] 2025-10-13 03:22:30,888 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:22:56] 2025-10-13 03:22:30,889 | INFO     | [monitor] control thread has ended
[2025-10-12 23:22:56] 2025-10-13 03:22:34,938 | INFO     | all workflow threads have been joined
[2025-10-12 23:22:56] 2025-10-13 03:22:34,939 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:22:56] 2025-10-13 03:22:34,939 | INFO     | traces error code: 0
[2025-10-12 23:22:56] 2025-10-13 03:22:34,939 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:22:56] 2025-10-13 03:22:35,089 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:22:56] 2025-10-13 03:22:35,111 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:22:56] 2025-10-13 03:22:35,133 [wrapper] pilotpid: 1041181
[2025-10-12 23:22:56] 2025-10-13 03:22:35,152 [wrapper] Pilot exit status: 0
[2025-10-12 23:22:56] 2025-10-13 03:22:35,281 [wrapper] pandaids: 6840749485
[2025-10-12 23:22:56] 2025-10-13 03:22:36,123 [wrapper] cleanup supervisor_pilot 1546407 1041182
[2025-10-12 23:22:56] 2025-10-13 03:22:36,141 [wrapper] Test setup, not cleaning
[2025-10-12 23:22:56] 2025-10-13 03:22:36,173 [wrapper] apfmon messages muted
[2025-10-12 23:22:56] 2025-10-13 03:22:36,205 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:22:56] 2025-10-13 03:22:36,330 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:22:56]  *** Error codes and diagnostics ***
[2025-10-12 23:22:56]     "exeErrorCode": 0,
[2025-10-12 23:22:56]     "exeErrorDiag": "",
[2025-10-12 23:22:56]     "pilotErrorCode": 0,
[2025-10-12 23:22:56]     "pilotErrorDiag": "",
[2025-10-12 23:22:56]  *** Listing of results directory ***
[2025-10-12 23:22:56] total 419420
[2025-10-12 23:22:56] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 16:23 pilot3.tar.gz
[2025-10-12 23:22:56] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 16:38 queuedata.json
[2025-10-12 23:22:56] -rwx------. 1 boincer umatlas     36292 Oct 12 16:38 runpilot2-wrapper.sh
[2025-10-12 23:22:56] -rw-r--r--. 1 boincer umatlas       100 Oct 12 21:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:22:56] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 21:37 run_atlas
[2025-10-12 23:22:56] -rw-r--r--. 1 boincer umatlas       105 Oct 12 21:37 job.xml
[2025-10-12 23:22:56] -rw-r--r--. 2 boincer umatlas 220405059 Oct 12 21:37 EVNT.46676267._004856.pool.root.1
[2025-10-12 23:22:56] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 21:37 start_atlas.sh
[2025-10-12 23:22:56] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 21:37 shared
[2025-10-12 23:22:56] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 21:37 input.tar.gz
[2025-10-12 23:22:56] -rw-r--r--. 1 boincer umatlas         0 Oct 12 21:37 boinc_lockfile
[2025-10-12 23:22:56] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 21:37 pandaJob.out
[2025-10-12 23:22:56] -rw-------. 1 boincer umatlas    975595 Oct 12 21:38 agis_schedconf.cvmfs.json
[2025-10-12 23:22:56] -rw-------. 1 boincer umatlas   1560580 Oct 12 21:38 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:22:56] drwx------. 5 boincer umatlas      4096 Oct 12 21:38 pilot3
[2025-10-12 23:22:56] -rw-r--r--. 1 boincer umatlas      7173 Oct 12 23:18 init_data.xml
[2025-10-12 23:22:56] -rw-------. 1 boincer umatlas 202896273 Oct 12 23:20 HITS.46676269._088917.pool.root.1
[2025-10-12 23:22:56] -rw-r--r--. 1 boincer umatlas       529 Oct 12 23:20 boinc_task_state.xml
[2025-10-12 23:22:56] -rw-------. 1 boincer umatlas      1049 Oct 12 23:21 memory_monitor_summary.json
[2025-10-12 23:22:56] -rw-------. 1 boincer umatlas    340751 Oct 12 23:21 log.46676269._088917.job.log.tgz.1
[2025-10-12 23:22:56] -rw-------. 1 boincer umatlas      7804 Oct 12 23:21 heartbeat.json
[2025-10-12 23:22:56] -rw-------. 1 boincer umatlas        95 Oct 12 23:22 pilot_heartbeat.json
[2025-10-12 23:22:56] -rw-------. 1 boincer umatlas      5011 Oct 12 23:22 pilotlog.txt
[2025-10-12 23:22:56] -rw-------. 1 boincer umatlas    794925 Oct 12 23:22 log.46676269._088917.job.log.1
[2025-10-12 23:22:56] -rw-------. 1 boincer umatlas       357 Oct 12 23:22 output.list
[2025-10-12 23:22:56] -rw-r--r--. 1 boincer umatlas       620 Oct 12 23:22 runtime_log
[2025-10-12 23:22:56] -rw-------. 1 boincer umatlas   1157120 Oct 12 23:22 result.tar.gz
[2025-10-12 23:22:56] -rw-------. 1 boincer umatlas       657 Oct 12 23:22 XDlNDmh0HS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm9yUMDm67HxUn.diag
[2025-10-12 23:22:56] -rw-r--r--. 1 boincer umatlas      8703 Oct 12 23:22 runtime_log.err
[2025-10-12 23:22:56] -rw-r--r--. 1 boincer umatlas        27 Oct 12 23:22 wrapper_checkpoint.txt
[2025-10-12 23:22:56] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 23:22 boinc_mmap_file
[2025-10-12 23:22:56] -rw-r--r--. 1 boincer umatlas     22358 Oct 12 23:22 stderr.txt
[2025-10-12 23:22:56] HITS file was successfully produced:
[2025-10-12 23:22:56] -rw-------. 1 boincer umatlas 202896273 Oct 12 23:20 shared/HITS.pool.root.1
[2025-10-12 23:22:56]  *** Contents of shared directory: ***
[2025-10-12 23:22:56] total 415100
[2025-10-12 23:22:56] -rw-r--r--. 2 boincer umatlas 220405059 Oct 12 21:37 ATLAS.root_0
[2025-10-12 23:22:56] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 21:37 start_atlas.sh
[2025-10-12 23:22:56] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 21:37 input.tar.gz
[2025-10-12 23:22:56] -rw-------. 1 boincer umatlas 202896273 Oct 12 23:20 HITS.pool.root.1
[2025-10-12 23:22:56] -rw-------. 1 boincer umatlas   1157120 Oct 12 23:22 result.tar.gz
23:22:57 (1030434): run_atlas exited; CPU time 25188.196782
23:22:57 (1030434): called boinc_finish(0)

</stderr_txt>
]]>

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