Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:19:01 (1919842): wrapper (7.7.26015): starting
22:19:01 (1919842): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 22:19:01] Arguments: --nthreads 8
[2025-10-12 22:19:01] Threads: 8
[2025-10-12 22:19:01] Checking for CVMFS
[2025-10-12 22:19:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 22:19:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 22:19:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 22:19:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 22:19:04] 2.13.2.0 6309 6510 142900 151645 0 64 27439408 40960000 26853 16776704 0 17351053 99.734 10534851 29318 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 22:19:04] CVMFS is ok
[2025-10-12 22:19:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 22:19:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 22:19:04] Further information can be found at the LHC@home message board.
[2025-10-12 22:19:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 22:19:04] Checking for apptainer binary...
[2025-10-12 22:19:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 22:19:04] Running /usr/bin/apptainer --version
[2025-10-12 22:19:04] apptainer version 1.4.3-1.el9
[2025-10-12 22:19:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 22:19:06] c-211-35-3.aglt2.org
[2025-10-12 22:19:06] apptainer works
[2025-10-12 22:19:06] Set ATHENA_PROC_NUMBER=8
[2025-10-12 22:19:06] Set ATHENA_CORE_NUMBER=8
[2025-10-12 22:19:06] Starting ATLAS job with PandaID=6840749502
[2025-10-12 22:19:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:35:08]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:35:08] 2025-10-13 09:34:19,438 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:35:08] 2025-10-13 09:34:19,439 | INFO     | sum of square deviations: 23636086348.318195
[2025-10-13 05:35:08] 2025-10-13 09:34:19,443 | INFO     | sum of deviations: -8196704293.5070915
[2025-10-13 05:35:08] 2025-10-13 09:34:19,443 | INFO     | mean x: 1760335078.2099056
[2025-10-13 05:35:08] 2025-10-13 09:34:19,443 | INFO     | mean y: 2501305.0731132077
[2025-10-13 05:35:08] 2025-10-13 09:34:19,443 | INFO     | -- intersect: 612963878.3155296
[2025-10-13 05:35:08] 2025-10-13 09:34:19,444 | INFO     | intersect: 612963878.3155296
[2025-10-13 05:35:08] 2025-10-13 09:34:19,444 | INFO     | chi2: 3.6574070453603733
[2025-10-13 05:35:08] 2025-10-13 09:34:19,445 | INFO     | sum of square deviations: 22809741246.05736
[2025-10-13 05:35:08] 2025-10-13 09:34:19,449 | INFO     | sum of deviations: 47516841323.61346
[2025-10-13 05:35:08] 2025-10-13 09:34:19,449 | INFO     | mean x: 1760334925.7112172
[2025-10-13 05:35:08] 2025-10-13 09:34:19,449 | INFO     | mean y: 2511514.6992840096
[2025-10-13 05:35:08] 2025-10-13 09:34:19,450 | INFO     | -- intersect: -3664586434.335663
[2025-10-13 05:35:08] 2025-10-13 09:34:19,450 | INFO     | intersect: -3664586434.335663
[2025-10-13 05:35:08] 2025-10-13 09:34:19,450 | INFO     | chi2: 2.1509563895709136
[2025-10-13 05:35:08] 2025-10-13 09:34:19,450 | INFO     | current chi2=2.1509563895709136 (change=41.18903466597948 %)
[2025-10-13 05:35:08] 2025-10-13 09:34:19,451 | INFO     | sum of square deviations: 22002859442.71739
[2025-10-13 05:35:08] 2025-10-13 09:34:19,455 | INFO     | sum of deviations: 46696827497.84776
[2025-10-13 05:35:08] 2025-10-13 09:34:19,456 | INFO     | mean x: 1760334773.210145
[2025-10-13 05:35:08] 2025-10-13 09:34:19,456 | INFO     | mean y: 2511359.702898551
[2025-10-13 05:35:08] 2025-10-13 09:34:19,456 | INFO     | -- intersect: -3733459842.452135
[2025-10-13 05:35:08] 2025-10-13 09:34:19,456 | INFO     | intersect: -3733459842.452135
[2025-10-13 05:35:08] 2025-10-13 09:34:19,456 | INFO     | chi2: 2.151354275501644
[2025-10-13 05:35:08] 2025-10-13 09:34:19,457 | INFO     | current chi2=2.151354275501644 (change=-0.01849809380886182 %)
[2025-10-13 05:35:08] 2025-10-13 09:34:19,457 | INFO     | right removable region: 413
[2025-10-13 05:35:08] 2025-10-13 09:34:19,457 | INFO     | sum of square deviations: 22809712088.05734
[2025-10-13 05:35:08] 2025-10-13 09:34:19,461 | INFO     | sum of deviations: -97888678887.7637
[2025-10-13 05:35:08] 2025-10-13 09:34:19,462 | INFO     | mean x: 1760335230.7112172
[2025-10-13 05:35:08] 2025-10-13 09:34:19,462 | INFO     | mean y: 2517801.183770883
[2025-10-13 05:35:08] 2025-10-13 09:34:19,462 | INFO     | -- intersect: 7557058142.099739
[2025-10-13 05:35:08] 2025-10-13 09:34:19,462 | INFO     | intersect: 7557058142.099739
[2025-10-13 05:35:08] 2025-10-13 09:34:19,463 | INFO     | chi2: 1.676872800986137
[2025-10-13 05:35:08] 2025-10-13 09:34:19,463 | INFO     | current chi2=1.676872800986137 (change=54.15132140915667 %)
[2025-10-13 05:35:08] 2025-10-13 09:34:19,463 | INFO     | sum of square deviations: 22002826809.294693
[2025-10-13 05:35:08] 2025-10-13 09:34:19,468 | INFO     | sum of deviations: -110036904840.49272
[2025-10-13 05:35:08] 2025-10-13 09:34:19,468 | INFO     | mean x: 1760335383.2125604
[2025-10-13 05:35:08] 2025-10-13 09:34:19,468 | INFO     | mean y: 2520089.7101449277
[2025-10-13 05:35:08] 2025-10-13 09:34:19,468 | INFO     | -- intersect: 8806018782.345718
[2025-10-13 05:35:08] 2025-10-13 09:34:19,468 | INFO     | intersect: 8806018782.345718
[2025-10-13 05:35:08] 2025-10-13 09:34:19,469 | INFO     | chi2: 1.6281070396271609
[2025-10-13 05:35:08] 2025-10-13 09:34:19,469 | INFO     | current chi2=1.6281070396271609 (change=2.9081371783416023 %)
[2025-10-13 05:35:08] 2025-10-13 09:34:19,469 | INFO     | left removable region: 20
[2025-10-13 05:35:08] 2025-10-13 09:34:19,470 | INFO     | sum of square deviations: 18821630531.348568
[2025-10-13 05:35:08] 2025-10-13 09:34:19,473 | INFO     | sum of deviations: -40838837588.572525
[2025-10-13 05:35:08] 2025-10-13 09:34:19,474 | INFO     | mean x: 1760335352.707379
[2025-10-13 05:35:08] 2025-10-13 09:34:19,474 | INFO     | mean y: 2528135.473282443
[2025-10-13 05:35:08] 2025-10-13 09:34:19,474 | INFO     | -- intersect: 3822072326.976879
[2025-10-13 05:35:08] 2025-10-13 09:34:19,474 | INFO     | intersect: 3822072326.976879
[2025-10-13 05:35:08] 2025-10-13 09:34:19,474 | INFO     | chi2: 0.07058571518389964
[2025-10-13 05:35:08] 2025-10-13 09:34:19,475 | INFO     | -- intersect: 3822072326.976879
[2025-10-13 05:35:08] 2025-10-13 09:34:19,475 | INFO     | current memory leak: -2.17 B/s (using 393 data points, chi2=0.07)
[2025-10-13 05:35:08] 2025-10-13 09:34:19,475 | INFO     | could have reported an average CPU frequency of 2533 MHz (18 samples)
[2025-10-13 05:35:08] 2025-10-13 09:34:19,476 | INFO     | ..............................
[2025-10-13 05:35:08] 2025-10-13 09:34:19,476 | INFO     | . Timing measurements:
[2025-10-13 05:35:08] 2025-10-13 09:34:19,476 | INFO     | . get job = 0 s
[2025-10-13 05:35:08] 2025-10-13 09:34:19,476 | INFO     | . initial setup = 5 s
[2025-10-13 05:35:08] 2025-10-13 09:34:19,476 | INFO     | . payload setup = 45 s
[2025-10-13 05:35:08] 2025-10-13 09:34:19,476 | INFO     | . stage-in = 0 s
[2025-10-13 05:35:08] 2025-10-13 09:34:19,476 | INFO     | . payload execution = 25866 s
[2025-10-13 05:35:08] 2025-10-13 09:34:19,476 | INFO     | . stage-out = 7 s
[2025-10-13 05:35:08] 2025-10-13 09:34:19,476 | INFO     | . log creation = 1 s
[2025-10-13 05:35:08] 2025-10-13 09:34:19,476 | INFO     | ..............................
[2025-10-13 05:35:08] 2025-10-13 09:34:20,187 | INFO     | 
[2025-10-13 05:35:08] 2025-10-13 09:34:20,188 | INFO     | job summary report
[2025-10-13 05:35:08] 2025-10-13 09:34:20,188 | INFO     | --------------------------------------------------
[2025-10-13 05:35:08] 2025-10-13 09:34:20,188 | INFO     | PanDA job id: 6840749502
[2025-10-13 05:35:08] 2025-10-13 09:34:20,188 | INFO     | task id: 46676269
[2025-10-13 05:35:08] 2025-10-13 09:34:20,188 | INFO     | errors: (none)
[2025-10-13 05:35:08] 2025-10-13 09:34:20,188 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:35:08] 2025-10-13 09:34:20,188 | INFO     | pilot state: finished 
[2025-10-13 05:35:08] 2025-10-13 09:34:20,188 | INFO     | transexitcode: 0
[2025-10-13 05:35:08] 2025-10-13 09:34:20,188 | INFO     | exeerrorcode: 0
[2025-10-13 05:35:08] 2025-10-13 09:34:20,188 | INFO     | exeerrordiag: 
[2025-10-13 05:35:08] 2025-10-13 09:34:20,188 | INFO     | exitcode: 0
[2025-10-13 05:35:08] 2025-10-13 09:34:20,189 | INFO     | exitmsg: OK
[2025-10-13 05:35:08] 2025-10-13 09:34:20,189 | INFO     | cpuconsumptiontime: 49115 s
[2025-10-13 05:35:08] 2025-10-13 09:34:20,189 | INFO     | nevents: 400
[2025-10-13 05:35:08] 2025-10-13 09:34:20,189 | INFO     | neventsw: 0
[2025-10-13 05:35:08] 2025-10-13 09:34:20,189 | INFO     | pid: 1935667
[2025-10-13 05:35:08] 2025-10-13 09:34:20,189 | INFO     | pgrp: 1935667
[2025-10-13 05:35:08] 2025-10-13 09:34:20,189 | INFO     | corecount: 8
[2025-10-13 05:35:08] 2025-10-13 09:34:20,189 | INFO     | event service: False
[2025-10-13 05:35:08] 2025-10-13 09:34:20,189 | INFO     | sizes: {0: 2348680, 1: 2348879, 2: 2348879, 13: 2348907, 24: 2348963, 35: 2348991, 38: 2349409, 47: 2349437, 25916: 2384908, 25924: 2393934, 25926: 2393990, 25968:
[2025-10-13 05:35:08] 2025-10-13 09:34:20,189 | INFO     | --------------------------------------------------
[2025-10-13 05:35:08] 2025-10-13 09:34:20,189 | INFO     | 
[2025-10-13 05:35:08] 2025-10-13 09:34:20,190 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 05:35:08] 2025-10-13 09:34:20,276 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:35:08] 2025-10-13 09:34:20,276 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:35:08] 2025-10-13 09:34:20,276 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:35:08] 2025-10-13 09:34:20,276 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:35:08] 2025-10-13 09:34:20,276 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:35:08] 2025-10-13 09:34:20,276 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:35:08] 2025-10-13 09:34:20,276 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:35:08] 2025-10-13 09:34:20,276 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:35:08] 2025-10-13 09:34:20,276 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:35:08] 2025-10-13 09:34:20,277 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:35:08] 2025-10-13 09:34:20,277 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:35:08] 2025-10-13 09:34:20,277 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:35:08] 2025-10-13 09:34:20,277 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:35:08] 2025-10-13 09:34:20,277 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:35:08] 2025-10-13 09:34:20,277 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:35:08] 2025-10-13 09:34:20,277 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:35:08] 2025-10-13 09:34:20,277 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:35:08] 2025-10-13 09:34:20,277 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:35:08] 2025-10-13 09:34:20,277 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:35:08] 2025-10-13 09:34:20,277 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:35:08] 2025-10-13 09:34:20,278 | INFO     | job 6840749502 has completed (purged errors)
[2025-10-13 05:35:08] 2025-10-13 09:34:20,278 | INFO     | overall cleanup function is called
[2025-10-13 05:35:08] 2025-10-13 09:34:21,291 | INFO     | --- collectZombieJob: --- 10, [1935667]
[2025-10-13 05:35:08] 2025-10-13 09:34:21,291 | INFO     | zombie collector waiting for pid 1935667
[2025-10-13 05:35:08] 2025-10-13 09:34:21,292 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:35:08] 2025-10-13 09:34:21,292 | INFO     | collected zombie processes
[2025-10-13 05:35:08] 2025-10-13 09:34:21,292 | INFO     | will attempt to kill all subprocesses of pid=1935667
[2025-10-13 05:35:08] 2025-10-13 09:34:22,456 | INFO     | process IDs to be killed: [1935667] (in reverse order)
[2025-10-13 05:35:08] 2025-10-13 09:34:23,289 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:35:08] 2025-10-13 09:34:23,289 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:35:08] 2025-10-13 09:34:23,498 | INFO     | did not find any defunct processes belonging to 1935667
[2025-10-13 05:35:08] 2025-10-13 09:34:23,688 | INFO     | did not find any defunct processes belonging to 1935667
[2025-10-13 05:35:08] 2025-10-13 09:34:23,689 | INFO     | ready for new job
[2025-10-13 05:35:08] 2025-10-13 09:34:23,692 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:35:08] 2025-10-13 09:34:23,695 | INFO     | ***************************************
[2025-10-13 05:35:08] 2025-10-13 09:34:23,695 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:35:08] 2025-10-13 09:34:23,695 | INFO     | ***************************************
[2025-10-13 05:35:08] 2025-10-13 09:34:23,696 | INFO     | 
[2025-10-13 05:35:08] 2025-10-13 09:34:23,711 | INFO     | architecture information:
[2025-10-13 05:35:08] 2025-10-13 09:34:23,712 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:35:08] 2025-10-13 09:34:23,766 | INFO     | cat /etc/os-release:
[2025-10-13 05:35:08] NAME="CentOS Linux"
[2025-10-13 05:35:08] VERSION="7 (Core)"
[2025-10-13 05:35:08] ID="centos"
[2025-10-13 05:35:08] ID_LIKE="rhel fedora"
[2025-10-13 05:35:08] VERSION_ID="7"
[2025-10-13 05:35:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:35:08] ANSI_COLOR="0;31"
[2025-10-13 05:35:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:35:08] HOME_URL="https://www.centos.org/"
[2025-10-13 05:35:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:35:08] 
[2025-10-13 05:35:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:35:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:35:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:35:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:35:08] 
[2025-10-13 05:35:08] 2025-10-13 09:34:23,773 | INFO     | ***************************************
[2025-10-13 05:35:08] 2025-10-13 09:34:24,276 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 05:35:08] 2025-10-13 09:34:24,359 | INFO     | sufficient remaining disk space (126082875392 B)
[2025-10-13 05:35:08] 2025-10-13 09:34:24,360 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:35:08] 2025-10-13 09:34:24,360 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:35:08] 2025-10-13 09:34:24,360 | INFO     | update_server=False
[2025-10-13 05:35:08] 2025-10-13 09:34:24,360 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:35:08] 2025-10-13 09:34:24,360 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:35:08] 2025-10-13 09:34:24,799 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 05:35:08] 2025-10-13 09:34:24,799 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 05:35:08] 2025-10-13 09:34:24,800 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:35:08] 2025-10-13 09:34:24,800 | INFO     | will abort loop
[2025-10-13 05:35:08] 2025-10-13 09:34:24,905 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:35:08] 2025-10-13 09:34:25,011 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:35:08] 2025-10-13 09:34:25,307 | INFO     | all data control threads have been joined
[2025-10-13 05:35:08] 2025-10-13 09:34:25,360 | INFO     | all payload control threads have been joined
[2025-10-13 05:35:08] 2025-10-13 09:34:25,366 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:35:08] 2025-10-13 09:34:25,717 | INFO     | all job control threads have been joined
[2025-10-13 05:35:08] 2025-10-13 09:34:25,738 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:35:08] 2025-10-13 09:34:25,805 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:35:08] 2025-10-13 09:34:25,925 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:35:08] 2025-10-13 09:34:26,205 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:35:08] 2025-10-13 09:34:26,206 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:35:08] 2025-10-13 09:34:26,313 | INFO     | [data] control thread has finished
[2025-10-13 05:35:08] 2025-10-13 09:34:26,366 | INFO     | [payload] control thread has finished
[2025-10-13 05:35:08] 2025-10-13 09:34:26,368 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:35:08] 2025-10-13 09:34:26,513 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:35:08] 2025-10-13 09:34:26,711 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:35:08] 2025-10-13 09:34:26,712 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:35:08] 2025-10-13 09:34:26,718 | INFO     | [job] validate thread has finished
[2025-10-13 05:35:08] 2025-10-13 09:34:26,719 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:35:08] 2025-10-13 09:34:26,723 | INFO     | [job] control thread has finished
[2025-10-13 05:35:08] 2025-10-13 09:34:29,026 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:35:08] 2025-10-13 09:34:52,889 | INFO     | PID=1924007 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 05:35:08] 2025-10-13 09:34:52,889 | INFO     | .. there are 26 such processes running
[2025-10-13 05:35:08] 2025-10-13 09:34:52,889 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:35:08] 2025-10-13 09:34:52,889 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:35:08] 2025-10-13 09:34:52,889 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:35:08] 2025-10-13 09:34:59,254 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:35:08] 2025-10-13 09:35:00,073 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140054607193920)>', '<ExcThread(monitor, started 140053967787776)>']
[2025-10-13 05:35:08] 2025-10-13 09:35:00,950 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:35:08] 2025-10-13 09:35:00,950 | INFO     | [monitor] control thread has ended
[2025-10-13 05:35:08] 2025-10-13 09:35:05,100 | INFO     | all workflow threads have been joined
[2025-10-13 05:35:08] 2025-10-13 09:35:05,100 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:35:08] 2025-10-13 09:35:05,101 | INFO     | traces error code: 0
[2025-10-13 05:35:08] 2025-10-13 09:35:05,101 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:35:08] 2025-10-13 09:35:06,503 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:35:08] 2025-10-13 09:35:06,523 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:35:08] 2025-10-13 09:35:06,538 [wrapper] pilotpid: 1924007
[2025-10-13 05:35:08] 2025-10-13 09:35:06,553 [wrapper] Pilot exit status: 0
[2025-10-13 05:35:08] 2025-10-13 09:35:06,672 [wrapper] pandaids: 6840749502
[2025-10-13 05:35:08] 2025-10-13 09:35:07,260 [wrapper] supervise_pilot (15 min periods counter: 30)
[2025-10-13 05:35:08] 2025-10-13 09:35:07,434 [wrapper] No supervise_pilot CHILD process found
[2025-10-13 05:35:08] 2025-10-13 09:35:07,449 [wrapper] Test setup, not cleaning
[2025-10-13 05:35:08] 2025-10-13 09:35:07,476 [wrapper] apfmon messages muted
[2025-10-13 05:35:08] 2025-10-13 09:35:07,491 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:35:08] 2025-10-13 09:35:07,511 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:35:08]  *** Error codes and diagnostics ***
[2025-10-13 05:35:08]     "exeErrorCode": 0,
[2025-10-13 05:35:08]     "exeErrorDiag": "",
[2025-10-13 05:35:08]     "pilotErrorCode": 0,
[2025-10-13 05:35:08]     "pilotErrorDiag": "",
[2025-10-13 05:35:08]  *** Listing of results directory ***
[2025-10-13 05:35:08] total 412280
[2025-10-13 05:35:08] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 16:23 pilot3.tar.gz
[2025-10-13 05:35:08] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 16:38 queuedata.json
[2025-10-13 05:35:08] -rwx------. 1 boincer umatlas     36292 Oct 12 16:39 runpilot2-wrapper.sh
[2025-10-13 05:35:08] -rw-r--r--. 1 boincer umatlas       100 Oct 12 22:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:35:08] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 22:19 run_atlas
[2025-10-13 05:35:08] -rw-r--r--. 1 boincer umatlas       105 Oct 12 22:19 job.xml
[2025-10-13 05:35:08] -rw-r--r--. 2 boincer umatlas 217717795 Oct 12 22:19 EVNT.46676267._004857.pool.root.1
[2025-10-13 05:35:08] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 22:19 start_atlas.sh
[2025-10-13 05:35:08] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 22:19 shared
[2025-10-13 05:35:08] -rw-r--r--. 2 boincer umatlas    569684 Oct 12 22:19 input.tar.gz
[2025-10-13 05:35:08] -rw-r--r--. 1 boincer umatlas         0 Oct 12 22:19 boinc_lockfile
[2025-10-13 05:35:08] -rw-r--r--. 1 boincer umatlas      2547 Oct 12 22:19 pandaJob.out
[2025-10-13 05:35:08] -rw-------. 1 boincer umatlas    974373 Oct 12 22:20 agis_schedconf.cvmfs.json
[2025-10-13 05:35:08] drwx------. 5 boincer umatlas      4096 Oct 12 22:20 pilot3
[2025-10-13 05:35:08] -rw-r--r--. 1 boincer umatlas      6858 Oct 13 05:27 init_data.xml
[2025-10-13 05:35:08] -rw-------. 1 boincer umatlas 193244498 Oct 13 05:31 HITS.46676269._088934.pool.root.1
[2025-10-13 05:35:08] -rw-r--r--. 1 boincer umatlas       531 Oct 13 05:31 boinc_task_state.xml
[2025-10-13 05:35:08] -rw-------. 1 boincer umatlas      1045 Oct 13 05:33 memory_monitor_summary.json
[2025-10-13 05:35:08] -rw-------. 1 boincer umatlas   1560580 Oct 13 05:33 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:35:08] -rw-------. 1 boincer umatlas    579354 Oct 13 05:33 log.46676269._088934.job.log.tgz.1
[2025-10-13 05:35:08] -rw-------. 1 boincer umatlas        95 Oct 13 05:34 pilot_heartbeat.json
[2025-10-13 05:35:08] -rw-------. 1 boincer umatlas      7829 Oct 13 05:34 heartbeat.json
[2025-10-13 05:35:08] -rw-------. 1 boincer umatlas      5011 Oct 13 05:35 pilotlog.txt
[2025-10-13 05:35:08] -rw-------. 1 boincer umatlas   3073065 Oct 13 05:35 log.46676269._088934.job.log.1
[2025-10-13 05:35:08] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 05:35 boinc_mmap_file
[2025-10-13 05:35:08] -rw-r--r--. 1 boincer umatlas        28 Oct 13 05:35 wrapper_checkpoint.txt
[2025-10-13 05:35:08] -rw-------. 1 boincer umatlas       357 Oct 13 05:35 output.list
[2025-10-13 05:35:08] -rw-r--r--. 1 boincer umatlas       620 Oct 13 05:35 runtime_log
[2025-10-13 05:35:08] -rw-------. 1 boincer umatlas   3676160 Oct 13 05:35 result.tar.gz
[2025-10-13 05:35:08] -rw-------. 1 boincer umatlas       659 Oct 13 05:35 URNLDmv1HS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPUlNDmOe8Q3m.diag
[2025-10-13 05:35:08] -rw-r--r--. 1 boincer umatlas      8714 Oct 13 05:35 runtime_log.err
[2025-10-13 05:35:08] -rw-r--r--. 1 boincer umatlas     20989 Oct 13 05:35 stderr.txt
[2025-10-13 05:35:08] HITS file was successfully produced:
[2025-10-13 05:35:08] -rw-------. 1 boincer umatlas 193244498 Oct 13 05:31 shared/HITS.pool.root.1
[2025-10-13 05:35:08]  *** Contents of shared directory: ***
[2025-10-13 05:35:08] total 405508
[2025-10-13 05:35:08] -rw-r--r--. 2 boincer umatlas 217717795 Oct 12 22:19 ATLAS.root_0
[2025-10-13 05:35:08] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 22:19 start_atlas.sh
[2025-10-13 05:35:08] -rw-r--r--. 2 boincer umatlas    569684 Oct 12 22:19 input.tar.gz
[2025-10-13 05:35:08] -rw-------. 1 boincer umatlas 193244498 Oct 13 05:31 HITS.pool.root.1
[2025-10-13 05:35:08] -rw-------. 1 boincer umatlas   3676160 Oct 13 05:35 result.tar.gz
05:35:10 (1919842): run_atlas exited; CPU time 50225.842467
05:35:10 (1919842): called boinc_finish(0)

</stderr_txt>
]]>

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