Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:30:09 (490734): wrapper (7.7.26015): starting
03:30:09 (490734): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 03:30:09] Arguments: --nthreads 3
[2025-10-13 03:30:09] Threads: 3
[2025-10-13 03:30:09] Checking for CVMFS
[2025-10-13 03:30:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 03:30:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 03:30:09] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 03:30:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 03:30:09] 2.9.2.0 2543460 5103 84688 151643 2 57 4237293 36864001 0 130560 0 3940973 99.991 174513 887 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 03:30:09] CVMFS is ok
[2025-10-13 03:30:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 03:30:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 03:30:09] Further information can be found at the LHC@home message board.
[2025-10-13 03:30:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 03:30:09] Checking for apptainer binary...
[2025-10-13 03:30:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 03:30:09] Running /usr/bin/apptainer --version
[2025-10-13 03:30:10] apptainer version 1.4.1-1.1
[2025-10-13 03:30:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 03:30:10] cosA125b
[2025-10-13 03:30:10] apptainer works
[2025-10-13 03:30:10] Set ATHENA_PROC_NUMBER=3
[2025-10-13 03:30:10] Set ATHENA_CORE_NUMBER=3
[2025-10-13 03:30:10] Starting ATLAS job with PandaID=6840969404
[2025-10-13 03:30:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:00:37]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:00:37] 2025-10-13 02:59:55,788 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 1973633 B
[2025-10-13 05:00:37] 2025-10-13 02:59:55,788 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15554 B
[2025-10-13 05:00:37] 2025-10-13 02:59:55,788 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 05:00:37] 2025-10-13 02:59:55,797 | INFO     | sufficient remaining disk space (357765742592 B)
[2025-10-13 05:00:37] 2025-10-13 02:59:55,797 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-13 05:00:37] 2025-10-13 02:59:55,797 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6840969404: 2274505 B (within 2537553920 B limit)
[2025-10-13 05:00:37] 2025-10-13 02:59:55,797 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6840969404/HITS.46676269._092250.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-13 05:00:37] 2025-10-13 02:59:55,797 | INFO     | total size of present files: 0 B (workdir size: 2274505 B)
[2025-10-13 05:00:37] 2025-10-13 02:59:55,797 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6840969404/HITS.46676269._092250.pool.root.1 since it does not exist
[2025-10-13 05:00:37] 2025-10-13 02:59:55,845 | INFO     | number of running child processes to parent process 500926: 1
[2025-10-13 05:00:37] 2025-10-13 02:59:55,845 | INFO     | maximum number of monitored processes: 6
[2025-10-13 05:00:37] 2025-10-13 02:59:56,523 | INFO     | time since job start (5381s) is within the limit (172800.0s)
[2025-10-13 05:00:37] 2025-10-13 02:59:58,347 | INFO     | monitor loop #412: job 0:6840969404 is in state 'finished'
[2025-10-13 05:00:37] 2025-10-13 02:59:58,347 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 05:00:37] 2025-10-13 02:59:58,529 | INFO     | time since job start (5383s) is within the limit (172800.0s)
[2025-10-13 05:00:37] 2025-10-13 02:59:58,578 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 05:00:37] 2025-10-13 03:00:00,533 | INFO     | time since job start (5385s) is within the limit (172800.0s)
[2025-10-13 05:00:37] 2025-10-13 03:00:00,613 | INFO     | job 6840969404 has state=finished
[2025-10-13 05:00:37] 2025-10-13 03:00:00,614 | INFO     | preparing for final server update for job 6840969404 in state='finished'
[2025-10-13 05:00:37] 2025-10-13 03:00:00,850 | INFO     | monitor loop #413: job 0:6840969404 is in state 'finished'
[2025-10-13 05:00:37] 2025-10-13 03:00:00,850 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 05:00:37] 2025-10-13 03:00:01,187 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-13 05:00:37] 2025-10-13 03:00:01,188 | INFO     | this job has now completed (state=finished)
[2025-10-13 05:00:37] 2025-10-13 03:00:01,188 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 05:00:37] 2025-10-13 03:00:01,188 | INFO     | log transfer has been attempted: DONE
[2025-10-13 05:00:37] 2025-10-13 03:00:01,188 | INFO     | job 6840969404 has finished - writing final server update
[2025-10-13 05:00:37] 2025-10-13 03:00:01,188 | INFO     | total number of processed events: 400 (read)
[2025-10-13 05:00:37] 2025-10-13 03:00:01,188 | INFO     | executing command: lscpu
[2025-10-13 05:00:37] 2025-10-13 03:00:01,201 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 05:00:37] 2025-10-13 03:00:02,538 | INFO     | time since job start (5387s) is within the limit (172800.0s)
[2025-10-13 05:00:37] 2025-10-13 03:00:03,353 | INFO     | monitor loop #414: job 0:6840969404 is in state 'finished'
[2025-10-13 05:00:37] 2025-10-13 03:00:03,354 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 05:00:37] 2025-10-13 03:00:04,543 | INFO     | time since job start (5389s) is within the limit (172800.0s)
[2025-10-13 05:00:37] 2025-10-13 03:00:05,857 | INFO     | monitor loop #415: job 0:6840969404 is in state 'finished'
[2025-10-13 05:00:37] 2025-10-13 03:00:05,857 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 05:00:37] 2025-10-13 03:00:05,943 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 05:00:37] 2025-10-13 03:00:05,944 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3748.99875
[2025-10-13 05:00:37] 2025-10-13 03:00:05,945 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6840969404/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 05:00:37] 2025-10-13 03:00:05,945 | INFO     | extracted standard info from prmon json
[2025-10-13 05:00:37] 2025-10-13 03:00:05,945 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 05:00:37] 2025-10-13 03:00:05,945 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 05:00:37] 2025-10-13 03:00:05,946 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 05:00:37] 2025-10-13 03:00:05,946 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:00:37] 2025-10-13 03:00:05,946 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:00:37] 2025-10-13 03:00:05,946 | INFO     | sum of square deviations: 164765880.0
[2025-10-13 05:00:37] 2025-10-13 03:00:05,947 | INFO     | sum of deviations: -14708937076.0
[2025-10-13 05:00:37] 2025-10-13 03:00:05,947 | INFO     | mean x: 1760321780.0
[2025-10-13 05:00:37] 2025-10-13 03:00:05,947 | INFO     | mean y: 2474925.049382716
[2025-10-13 05:00:37] 2025-10-13 03:00:05,947 | INFO     | -- intersect: 157149466131.7987
[2025-10-13 05:00:37] 2025-10-13 03:00:05,947 | INFO     | intersect: 157149466131.7987
[2025-10-13 05:00:37] 2025-10-13 03:00:05,947 | INFO     | chi2: 0.07442545822403647
[2025-10-13 05:00:37] 2025-10-13 03:00:05,947 | INFO     | -- intersect: 157149466131.7987
[2025-10-13 05:00:37] 2025-10-13 03:00:05,947 | INFO     | current memory leak: -89.27 B/s (using 81 data points, chi2=0.07)
[2025-10-13 05:00:37] 2025-10-13 03:00:05,947 | INFO     | could have reported an average CPU frequency of 3970 MHz (6 samples)
[2025-10-13 05:00:37] 2025-10-13 03:00:05,947 | INFO     | ..............................
[2025-10-13 05:00:37] 2025-10-13 03:00:05,947 | INFO     | . Timing measurements:
[2025-10-13 05:00:37] 2025-10-13 03:00:05,947 | INFO     | . get job = 0 s
[2025-10-13 05:00:37] 2025-10-13 03:00:05,947 | INFO     | . initial setup = 1 s
[2025-10-13 05:00:37] 2025-10-13 03:00:05,947 | INFO     | . payload setup = 2 s
[2025-10-13 05:00:37] 2025-10-13 03:00:05,947 | INFO     | . stage-in = 0 s
[2025-10-13 05:00:37] 2025-10-13 03:00:05,947 | INFO     | . payload execution = 5360 s
[2025-10-13 05:00:37] 2025-10-13 03:00:05,947 | INFO     | . stage-out = 0 s
[2025-10-13 05:00:37] 2025-10-13 03:00:05,947 | INFO     | . log creation = 0 s
[2025-10-13 05:00:37] 2025-10-13 03:00:05,947 | INFO     | ..............................
[2025-10-13 05:00:37] 2025-10-13 03:00:05,979 | INFO     | 
[2025-10-13 05:00:37] 2025-10-13 03:00:05,979 | INFO     | job summary report
[2025-10-13 05:00:37] 2025-10-13 03:00:05,979 | INFO     | --------------------------------------------------
[2025-10-13 05:00:37] 2025-10-13 03:00:05,979 | INFO     | PanDA job id: 6840969404
[2025-10-13 05:00:37] 2025-10-13 03:00:05,979 | INFO     | task id: 46676269
[2025-10-13 05:00:37] 2025-10-13 03:00:05,979 | INFO     | errors: (none)
[2025-10-13 05:00:37] 2025-10-13 03:00:05,979 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:00:37] 2025-10-13 03:00:05,979 | INFO     | pilot state: finished 
[2025-10-13 05:00:37] 2025-10-13 03:00:05,979 | INFO     | transexitcode: 0
[2025-10-13 05:00:37] 2025-10-13 03:00:05,979 | INFO     | exeerrorcode: 0
[2025-10-13 05:00:37] 2025-10-13 03:00:05,979 | INFO     | exeerrordiag: 
[2025-10-13 05:00:37] 2025-10-13 03:00:05,979 | INFO     | exitcode: 0
[2025-10-13 05:00:37] 2025-10-13 03:00:05,979 | INFO     | exitmsg: OK
[2025-10-13 05:00:37] 2025-10-13 03:00:05,979 | INFO     | cpuconsumptiontime: 15292 s
[2025-10-13 05:00:37] 2025-10-13 03:00:05,979 | INFO     | nevents: 400
[2025-10-13 05:00:37] 2025-10-13 03:00:05,979 | INFO     | neventsw: 0
[2025-10-13 05:00:37] 2025-10-13 03:00:05,979 | INFO     | pid: 500926
[2025-10-13 05:00:37] 2025-10-13 03:00:05,979 | INFO     | pgrp: 500926
[2025-10-13 05:00:37] 2025-10-13 03:00:05,979 | INFO     | corecount: 3
[2025-10-13 05:00:37] 2025-10-13 03:00:05,979 | INFO     | event service: False
[2025-10-13 05:00:37] 2025-10-13 03:00:05,979 | INFO     | sizes: {0: 2348860, 2: 2349122, 10: 2349150, 5366: 2384831, 5370: 2384859, 5377: 2385053}
[2025-10-13 05:00:37] 2025-10-13 03:00:05,979 | INFO     | --------------------------------------------------
[2025-10-13 05:00:37] 2025-10-13 03:00:05,979 | INFO     | 
[2025-10-13 05:00:37] 2025-10-13 03:00:05,979 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-13 05:00:37] 2025-10-13 03:00:05,991 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:00:37] 2025-10-13 03:00:05,991 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:00:37] 2025-10-13 03:00:05,991 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:00:37] 2025-10-13 03:00:05,991 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:00:37] 2025-10-13 03:00:05,991 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:00:37] 2025-10-13 03:00:05,991 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:00:37] 2025-10-13 03:00:05,991 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:00:37] 2025-10-13 03:00:05,991 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:00:37] 2025-10-13 03:00:05,991 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:00:37] 2025-10-13 03:00:05,991 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:00:37] 2025-10-13 03:00:05,991 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:00:37] 2025-10-13 03:00:05,991 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:00:37] 2025-10-13 03:00:05,991 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:00:37] 2025-10-13 03:00:05,991 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:00:37] 2025-10-13 03:00:05,991 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:00:37] 2025-10-13 03:00:05,991 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:00:37] 2025-10-13 03:00:05,991 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:00:37] 2025-10-13 03:00:05,991 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:00:37] 2025-10-13 03:00:05,991 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:00:37] 2025-10-13 03:00:05,991 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:00:37] 2025-10-13 03:00:05,991 | INFO     | job 6840969404 has completed (purged errors)
[2025-10-13 05:00:37] 2025-10-13 03:00:05,992 | INFO     | overall cleanup function is called
[2025-10-13 05:00:37] 2025-10-13 03:00:06,997 | INFO     | --- collectZombieJob: --- 10, [500926]
[2025-10-13 05:00:37] 2025-10-13 03:00:06,997 | INFO     | zombie collector waiting for pid 500926
[2025-10-13 05:00:37] 2025-10-13 03:00:06,997 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:00:37] 2025-10-13 03:00:06,997 | INFO     | collected zombie processes
[2025-10-13 05:00:37] 2025-10-13 03:00:06,997 | INFO     | will attempt to kill all subprocesses of pid=500926
[2025-10-13 05:00:37] 2025-10-13 03:00:07,046 | INFO     | process IDs to be killed: [500926] (in reverse order)
[2025-10-13 05:00:37] 2025-10-13 03:00:07,072 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:00:37] 2025-10-13 03:00:07,072 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:00:37] 2025-10-13 03:00:07,074 | INFO     | did not find any defunct processes belonging to 500926
[2025-10-13 05:00:37] 2025-10-13 03:00:07,076 | INFO     | did not find any defunct processes belonging to 500926
[2025-10-13 05:00:37] 2025-10-13 03:00:07,076 | INFO     | ready for new job
[2025-10-13 05:00:37] 2025-10-13 03:00:07,076 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:00:37] 2025-10-13 03:00:07,076 | INFO     | ***************************************
[2025-10-13 05:00:37] 2025-10-13 03:00:07,076 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:00:37] 2025-10-13 03:00:07,076 | INFO     | ***************************************
[2025-10-13 05:00:37] 2025-10-13 03:00:07,076 | INFO     | 
[2025-10-13 05:00:37] 2025-10-13 03:00:07,077 | INFO     | architecture information:
[2025-10-13 05:00:37] 2025-10-13 03:00:07,077 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:00:37] 2025-10-13 03:00:07,085 | INFO     | cat /etc/os-release:
[2025-10-13 05:00:37] NAME="CentOS Linux"
[2025-10-13 05:00:37] VERSION="7 (Core)"
[2025-10-13 05:00:37] ID="centos"
[2025-10-13 05:00:37] ID_LIKE="rhel fedora"
[2025-10-13 05:00:37] VERSION_ID="7"
[2025-10-13 05:00:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:00:37] ANSI_COLOR="0;31"
[2025-10-13 05:00:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:00:37] HOME_URL="https://www.centos.org/"
[2025-10-13 05:00:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:00:37] 
[2025-10-13 05:00:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:00:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:00:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:00:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:00:37] 
[2025-10-13 05:00:37] 2025-10-13 03:00:07,086 | INFO     | ***************************************
[2025-10-13 05:00:37] 2025-10-13 03:00:07,589 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 05:00:37] 2025-10-13 03:00:07,598 | INFO     | sufficient remaining disk space (357767839744 B)
[2025-10-13 05:00:37] 2025-10-13 03:00:07,598 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:00:37] 2025-10-13 03:00:07,598 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:00:37] 2025-10-13 03:00:07,598 | INFO     | update_server=False
[2025-10-13 05:00:37] 2025-10-13 03:00:07,598 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:00:37] 2025-10-13 03:00:07,598 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:00:37] 2025-10-13 03:00:07,598 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:00:37] 2025-10-13 03:00:07,599 | INFO     | aborting loop
[2025-10-13 05:00:37] 2025-10-13 03:00:08,053 | INFO     | all job control threads have been joined
[2025-10-13 05:00:37] 2025-10-13 03:00:08,204 | INFO     | all payload control threads have been joined
[2025-10-13 05:00:37] 2025-10-13 03:00:08,215 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:00:37] 2025-10-13 03:00:08,452 | INFO     | all data control threads have been joined
[2025-10-13 05:00:37] 2025-10-13 03:00:08,603 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:00:37] 2025-10-13 03:00:08,604 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:00:37] 2025-10-13 03:00:08,604 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:00:37] 2025-10-13 03:00:08,613 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:00:37] 2025-10-13 03:00:08,790 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:00:37] 2025-10-13 03:00:08,813 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:00:37] 2025-10-13 03:00:09,058 | INFO     | [job] control thread has finished
[2025-10-13 05:00:37] 2025-10-13 03:00:09,117 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:00:37] 2025-10-13 03:00:09,209 | INFO     | [payload] control thread has finished
[2025-10-13 05:00:37] 2025-10-13 03:00:09,284 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:00:37] 2025-10-13 03:00:09,307 | INFO     | [job] validate thread has finished
[2025-10-13 05:00:37] 2025-10-13 03:00:09,458 | INFO     | [data] control thread has finished
[2025-10-13 05:00:37] 2025-10-13 03:00:09,484 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:00:37] 2025-10-13 03:00:09,490 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:00:37] 2025-10-13 03:00:10,220 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:00:37] 2025-10-13 03:00:13,123 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:00:37] 2025-10-13 03:00:14,326 [wrapper] supervise_pilot (15 min periods counter: 7)
[2025-10-13 05:00:37] 2025-10-13 03:00:18,364 | INFO     | job.realtimelogging is not enabled
[2025-10-13 05:00:37] 2025-10-13 03:00:19,370 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:00:37] 2025-10-13 03:00:22,242 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:00:37] 2025-10-13 03:00:23,677 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140043150149440)>', '<ExcThread(monitor, started 140042290845440)>']
[2025-10-13 05:00:37] 2025-10-13 03:00:28,702 | INFO     | all workflow threads have been joined
[2025-10-13 05:00:37] 2025-10-13 03:00:28,702 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:00:37] 2025-10-13 03:00:28,702 | INFO     | traces error code: 0
[2025-10-13 05:00:37] 2025-10-13 03:00:28,702 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:00:37] 2025-10-13 03:00:37,696 | INFO     | PID=494458 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 05:00:37] 2025-10-13 03:00:37,697 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:00:37] 2025-10-13 03:00:37,697 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:00:37] 2025-10-13 03:00:37,697 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:00:37] 2025-10-13 03:00:37,697 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:00:37] 2025-10-13 03:00:37,697 | INFO     | [monitor] control thread has ended
[2025-10-13 05:00:37] 2025-10-13 03:00:37,743 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:00:37] 2025-10-13 03:00:37,746 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:00:37] 2025-10-13 03:00:37,748 [wrapper] pilotpid: 494458
[2025-10-13 05:00:37] 2025-10-13 03:00:37,750 [wrapper] Pilot exit status: 0
[2025-10-13 05:00:37] 2025-10-13 03:00:37,757 [wrapper] pandaids: 6840969404
[2025-10-13 05:00:37] 2025-10-13 03:00:37,775 [wrapper] cleanup supervisor_pilot  527244 494459
[2025-10-13 05:00:37] 2025-10-13 03:00:37,777 [wrapper] Test setup, not cleaning
[2025-10-13 05:00:37] 2025-10-13 03:00:37,780 [wrapper] apfmon messages muted
[2025-10-13 05:00:37] 2025-10-13 03:00:37,782 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:00:37] 2025-10-13 03:00:37,785 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:00:37]  *** Error codes and diagnostics ***
[2025-10-13 05:00:37]     "exeErrorCode": 0,
[2025-10-13 05:00:37]     "exeErrorDiag": "",
[2025-10-13 05:00:37]     "pilotErrorCode": 0,
[2025-10-13 05:00:37]     "pilotErrorDiag": "",
[2025-10-13 05:00:37]  *** Listing of results directory ***
[2025-10-13 05:00:37] total 416156
[2025-10-13 05:00:37] -rw-r--r-- 1 boinc boinc    557409 Oct 13 01:11 pilot3.tar.gz
[2025-10-13 05:00:37] -rw-r--r-- 1 boinc boinc      5112 Oct 13 01:29 queuedata.json
[2025-10-13 05:00:37] -rwx------ 1 boinc boinc     36292 Oct 13 01:29 runpilot2-wrapper.sh
[2025-10-13 05:00:37] -rw-r--r-- 1 boinc boinc       100 Oct 13 03:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:00:37] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 03:30 run_atlas
[2025-10-13 05:00:37] -rw-r--r-- 1 boinc boinc       105 Oct 13 03:30 job.xml
[2025-10-13 05:00:37] -rw-r--r-- 2 boinc boinc 220023227 Oct 13 03:30 EVNT.46676267._004659.pool.root.1
[2025-10-13 05:00:37] -rw-r--r-- 2 boinc boinc    569683 Oct 13 03:30 input.tar.gz
[2025-10-13 05:00:37] -rw-r--r-- 2 boinc boinc     15120 Oct 13 03:30 start_atlas.sh
[2025-10-13 05:00:37] drwxrwx--x 2 boinc boinc      4096 Oct 13 03:30 shared
[2025-10-13 05:00:37] -rw-r--r-- 1 boinc boinc         0 Oct 13 03:30 boinc_setup_complete
[2025-10-13 05:00:37] -rw-r--r-- 1 boinc boinc      6441 Oct 13 03:30 init_data.xml
[2025-10-13 05:00:37] -rw-r--r-- 1 boinc boinc         0 Oct 13 03:30 boinc_lockfile
[2025-10-13 05:00:37] -rw-r--r-- 1 boinc boinc      2550 Oct 13 03:30 pandaJob.out
[2025-10-13 05:00:37] -rw------- 1 boinc boinc    975595 Oct 13 03:30 agis_schedconf.cvmfs.json
[2025-10-13 05:00:37] -rw------- 1 boinc boinc   1560580 Oct 13 03:30 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:00:37] drwx------ 5 boinc boinc      4096 Oct 13 03:30 pilot3
[2025-10-13 05:00:37] -rw------- 1 boinc boinc 200145743 Oct 13 04:59 HITS.46676269._092250.pool.root.1
[2025-10-13 05:00:37] -rw-r--r-- 1 boinc boinc       529 Oct 13 04:59 boinc_task_state.xml
[2025-10-13 05:00:37] -rw------- 1 boinc boinc        95 Oct 13 04:59 pilot_heartbeat.json
[2025-10-13 05:00:37] -rw------- 1 boinc boinc      1020 Oct 13 04:59 memory_monitor_summary.json
[2025-10-13 05:00:37] -rw------- 1 boinc boinc    253540 Oct 13 04:59 log.46676269._092250.job.log.tgz.1
[2025-10-13 05:00:37] -rw------- 1 boinc boinc      7768 Oct 13 05:00 heartbeat.json
[2025-10-13 05:00:37] -rw-r--r-- 1 boinc boinc      8192 Oct 13 05:00 boinc_mmap_file
[2025-10-13 05:00:37] -rw-r--r-- 1 boinc boinc        27 Oct 13 05:00 wrapper_checkpoint.txt
[2025-10-13 05:00:37] -rw------- 1 boinc boinc       746 Oct 13 05:00 pilotlog.txt
[2025-10-13 05:00:37] -rw------- 1 boinc boinc    786049 Oct 13 05:00 log.46676269._092250.job.log.1
[2025-10-13 05:00:37] -rw------- 1 boinc boinc       357 Oct 13 05:00 output.list
[2025-10-13 05:00:37] -rw-r--r-- 1 boinc boinc       620 Oct 13 05:00 runtime_log
[2025-10-13 05:00:37] -rw------- 1 boinc boinc   1054720 Oct 13 05:00 result.tar.gz
[2025-10-13 05:00:37] -rw------- 1 boinc boinc       660 Oct 13 05:00 sKWLDmtgKS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmIHVMDmNDEIym.diag
[2025-10-13 05:00:37] -rw-r--r-- 1 boinc boinc      8787 Oct 13 05:00 runtime_log.err
[2025-10-13 05:00:37] -rw-r--r-- 1 boinc boinc     22291 Oct 13 05:00 stderr.txt
[2025-10-13 05:00:37] HITS file was successfully produced:
[2025-10-13 05:00:37] -rw------- 1 boinc boinc 200145743 Oct 13 04:59 shared/HITS.pool.root.1
[2025-10-13 05:00:37]  *** Contents of shared directory: ***
[2025-10-13 05:00:37] total 411940
[2025-10-13 05:00:37] -rw-r--r-- 2 boinc boinc 220023227 Oct 13 03:30 ATLAS.root_0
[2025-10-13 05:00:37] -rw-r--r-- 2 boinc boinc    569683 Oct 13 03:30 input.tar.gz
[2025-10-13 05:00:37] -rw-r--r-- 2 boinc boinc     15120 Oct 13 03:30 start_atlas.sh
[2025-10-13 05:00:37] -rw------- 1 boinc boinc 200145743 Oct 13 04:59 HITS.pool.root.1
[2025-10-13 05:00:37] -rw------- 1 boinc boinc   1054720 Oct 13 05:00 result.tar.gz
05:00:39 (490734): run_atlas exited; CPU time 15319.371438
05:00:39 (490734): called boinc_finish(0)

</stderr_txt>
]]>

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