Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:45 (3319955): wrapper (7.7.26015): starting
00:01:45 (3319955): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 00:01:46] Arguments: --nthreads 12
[2025-10-13 00:01:46] Threads: 12
[2025-10-13 00:01:46] Checking for CVMFS
[2025-10-13 00:01:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:01:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:01:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:01:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:01:50] 2.13.2.0 129353 118513 144632 151647 0 26 30101843 39288832 8841 16776704 0 69399536 99.777 42180021 37565 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 00:01:50] CVMFS is ok
[2025-10-13 00:01:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:01:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:01:50] Further information can be found at the LHC@home message board.
[2025-10-13 00:01:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:01:50] Checking for apptainer binary...
[2025-10-13 00:01:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:01:50] Running /usr/bin/apptainer --version
[2025-10-13 00:01:51] apptainer version 1.4.3-1.el9
[2025-10-13 00:01:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:01:52] c-210-13.aglt2.org
[2025-10-13 00:01:52] apptainer works
[2025-10-13 00:01:52] Set ATHENA_PROC_NUMBER=12
[2025-10-13 00:01:52] Set ATHENA_CORE_NUMBER=12
[2025-10-13 00:01:53] Starting ATLAS job with PandaID=6840750243
[2025-10-13 00:01:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 12:52:53]  *** The last 200 lines of the pilot log: ***
[2025-10-13 12:52:53] 2025-10-13 16:51:47,425 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 12:52:53] 2025-10-13 16:51:47,441 | INFO     | fitting pss+swap vs Time
[2025-10-13 12:52:53] 2025-10-13 16:51:47,442 | INFO     | sum of square deviations: 132385511573.12645
[2025-10-13 12:52:53] 2025-10-13 16:51:47,459 | INFO     | sum of deviations: 1165895030474.403
[2025-10-13 12:52:53] 2025-10-13 16:51:47,460 | INFO     | mean x: 1760351312.8977423
[2025-10-13 12:52:53] 2025-10-13 16:51:47,461 | INFO     | mean y: 2627927.3559096945
[2025-10-13 12:52:53] 2025-10-13 16:51:47,461 | INFO     | -- intersect: -15500464693.6435
[2025-10-13 12:52:53] 2025-10-13 16:51:47,462 | INFO     | intersect: -15500464693.6435
[2025-10-13 12:52:53] 2025-10-13 16:51:47,463 | INFO     | chi2: 7.298548736260918
[2025-10-13 12:52:53] 2025-10-13 16:51:47,465 | INFO     | sum of square deviations: 129766029918.63457
[2025-10-13 12:52:53] 2025-10-13 16:51:47,474 | INFO     | monitor loop #2552: job 0:6840750243 is in state 'finished'
[2025-10-13 12:52:53] 2025-10-13 16:51:47,475 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 12:52:53] 2025-10-13 16:51:47,542 | INFO     | sum of deviations: 1208689088309.0115
[2025-10-13 12:52:53] 2025-10-13 16:51:47,542 | INFO     | mean x: 1760351160.407754
[2025-10-13 12:52:53] 2025-10-13 16:51:47,542 | INFO     | mean y: 2630402.3770053475
[2025-10-13 12:52:53] 2025-10-13 16:51:47,542 | INFO     | -- intersect: -16393935328.35447
[2025-10-13 12:52:53] 2025-10-13 16:51:47,542 | INFO     | intersect: -16393935328.35447
[2025-10-13 12:52:53] 2025-10-13 16:51:47,544 | INFO     | chi2: 6.584700964221884
[2025-10-13 12:52:53] 2025-10-13 16:51:47,544 | INFO     | current chi2=6.584700964221884 (change=9.78068103447017 %)
[2025-10-13 12:52:53] 2025-10-13 16:51:47,544 | INFO     | right removable region: 747
[2025-10-13 12:52:53] 2025-10-13 16:51:47,571 | INFO     | sum of square deviations: 129765249844.9988
[2025-10-13 12:52:53] 2025-10-13 16:51:47,686 | INFO     | sum of deviations: 936018747657.1896
[2025-10-13 12:52:53] 2025-10-13 16:51:47,718 | INFO     | mean x: 1760351465.4104278
[2025-10-13 12:52:53] 2025-10-13 16:51:47,718 | INFO     | mean y: 2641299.1296791444
[2025-10-13 12:52:53] 2025-10-13 16:51:47,718 | INFO     | -- intersect: -12695072272.555561
[2025-10-13 12:52:53] 2025-10-13 16:51:47,718 | INFO     | intersect: -12695072272.555561
[2025-10-13 12:52:53] 2025-10-13 16:51:47,719 | INFO     | chi2: 4.287997048821919
[2025-10-13 12:52:53] 2025-10-13 16:51:47,720 | INFO     | current chi2=4.287997048821919 (change=41.24863443717059 %)
[2025-10-13 12:52:53] 2025-10-13 16:51:47,721 | INFO     | sum of square deviations: 127179870850.31436
[2025-10-13 12:52:53] 2025-10-13 16:51:47,845 | INFO     | sum of deviations: 780516141566.3562
[2025-10-13 12:52:53] 2025-10-13 16:51:47,846 | INFO     | mean x: 1760351617.9205923
[2025-10-13 12:52:53] 2025-10-13 16:51:47,846 | INFO     | mean y: 2650468.734858681
[2025-10-13 12:52:53] 2025-10-13 16:51:47,846 | INFO     | -- intersect: -10800811143.807556
[2025-10-13 12:52:53] 2025-10-13 16:51:47,846 | INFO     | intersect: -10800811143.807556
[2025-10-13 12:52:53] 2025-10-13 16:51:47,883 | INFO     | chi2: 3.0406526252371364
[2025-10-13 12:52:53] 2025-10-13 16:51:47,883 | INFO     | current chi2=3.0406526252371364 (change=29.089209003244925 %)
[2025-10-13 12:52:53] 2025-10-13 16:51:47,885 | INFO     | sum of square deviations: 124629050762.97592
[2025-10-13 12:52:53] 2025-10-13 16:51:47,986 | INFO     | sum of deviations: 675245341963.0406
[2025-10-13 12:52:53] 2025-10-13 16:51:48,038 | INFO     | mean x: 1760351770.4308944
[2025-10-13 12:52:53] 2025-10-13 16:51:48,039 | INFO     | mean y: 2656762.8929539295
[2025-10-13 12:52:53] 2025-10-13 16:51:48,039 | INFO     | -- intersect: -9535001800.041206
[2025-10-13 12:52:53] 2025-10-13 16:51:48,039 | INFO     | intersect: -9535001800.041206
[2025-10-13 12:52:53] 2025-10-13 16:51:48,040 | INFO     | chi2: 2.517609402649535
[2025-10-13 12:52:53] 2025-10-13 16:51:48,041 | INFO     | current chi2=2.517609402649535 (change=17.201676319300375 %)
[2025-10-13 12:52:53] 2025-10-13 16:51:48,041 | INFO     | left removable region: 30
[2025-10-13 12:52:53] 2025-10-13 16:51:48,060 | INFO     | sum of square deviations: 114288810937.05713
[2025-10-13 12:52:53] 2025-10-13 16:51:48,142 | INFO     | sum of deviations: 449824202515.5384
[2025-10-13 12:52:53] 2025-10-13 16:51:48,142 | INFO     | mean x: 1760352044.9637377
[2025-10-13 12:52:53] 2025-10-13 16:51:48,142 | INFO     | mean y: 2676210.0976290097
[2025-10-13 12:52:53] 2025-10-13 16:51:48,142 | INFO     | -- intersect: -6925814411.862815
[2025-10-13 12:52:53] 2025-10-13 16:51:48,142 | INFO     | intersect: -6925814411.862815
[2025-10-13 12:52:53] 2025-10-13 16:51:48,144 | INFO     | chi2: 0.6064597592044696
[2025-10-13 12:52:53] 2025-10-13 16:51:48,144 | INFO     | -- intersect: -6925814411.862815
[2025-10-13 12:52:53] 2025-10-13 16:51:48,144 | INFO     | current memory leak: 3.94 B/s (using 717 data points, chi2=0.61)
[2025-10-13 12:52:53] 2025-10-13 16:51:48,146 | INFO     | could have reported an average CPU frequency of 2579 MHz (28 samples)
[2025-10-13 12:52:53] 2025-10-13 16:51:48,146 | INFO     | ..............................
[2025-10-13 12:52:53] 2025-10-13 16:51:48,146 | INFO     | . Timing measurements:
[2025-10-13 12:52:53] 2025-10-13 16:51:48,146 | INFO     | . get job = 1 s
[2025-10-13 12:52:53] 2025-10-13 16:51:48,146 | INFO     | . initial setup = 8 s
[2025-10-13 12:52:53] 2025-10-13 16:51:48,147 | INFO     | . payload setup = 43 s
[2025-10-13 12:52:53] 2025-10-13 16:51:48,147 | INFO     | . stage-in = 0 s
[2025-10-13 12:52:53] 2025-10-13 16:51:48,147 | INFO     | . payload execution = 45939 s
[2025-10-13 12:52:53] 2025-10-13 16:51:48,147 | INFO     | . stage-out = 4 s
[2025-10-13 12:52:53] 2025-10-13 16:51:48,147 | INFO     | . log creation = 1 s
[2025-10-13 12:52:53] 2025-10-13 16:51:48,147 | INFO     | ..............................
[2025-10-13 12:52:53] 2025-10-13 16:51:48,282 | INFO     | 
[2025-10-13 12:52:53] 2025-10-13 16:51:48,282 | INFO     | job summary report
[2025-10-13 12:52:53] 2025-10-13 16:51:48,282 | INFO     | --------------------------------------------------
[2025-10-13 12:52:53] 2025-10-13 16:51:48,282 | INFO     | PanDA job id: 6840750243
[2025-10-13 12:52:53] 2025-10-13 16:51:48,283 | INFO     | task id: 46676269
[2025-10-13 12:52:53] 2025-10-13 16:51:48,283 | INFO     | errors: (none)
[2025-10-13 12:52:53] 2025-10-13 16:51:48,283 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 12:52:53] 2025-10-13 16:51:48,283 | INFO     | pilot state: finished 
[2025-10-13 12:52:53] 2025-10-13 16:51:48,283 | INFO     | transexitcode: 0
[2025-10-13 12:52:53] 2025-10-13 16:51:48,283 | INFO     | exeerrorcode: 0
[2025-10-13 12:52:53] 2025-10-13 16:51:48,283 | INFO     | exeerrordiag: 
[2025-10-13 12:52:53] 2025-10-13 16:51:48,283 | INFO     | exitcode: 0
[2025-10-13 12:52:53] 2025-10-13 16:51:48,283 | INFO     | exitmsg: OK
[2025-10-13 12:52:53] 2025-10-13 16:51:48,283 | INFO     | cpuconsumptiontime: 57675 s
[2025-10-13 12:52:53] 2025-10-13 16:51:48,284 | INFO     | nevents: 400
[2025-10-13 12:52:53] 2025-10-13 16:51:48,284 | INFO     | neventsw: 0
[2025-10-13 12:52:53] 2025-10-13 16:51:48,284 | INFO     | pid: 3342406
[2025-10-13 12:52:53] 2025-10-13 16:51:48,284 | INFO     | pgrp: 3342406
[2025-10-13 12:52:53] 2025-10-13 16:51:48,284 | INFO     | corecount: 12
[2025-10-13 12:52:53] 2025-10-13 16:51:48,284 | INFO     | event service: False
[2025-10-13 12:52:53] 2025-10-13 16:51:48,284 | INFO     | sizes: {0: 2347976, 2: 2348577, 3: 2348661, 6: 2348888, 8: 2348888, 18: 2348916, 30: 2349072, 42: 2349100, 53: 2349418, 65: 2349446, 45988: 2394160, 45989: 2394439
[2025-10-13 12:52:53] 2025-10-13 16:51:48,284 | INFO     | --------------------------------------------------
[2025-10-13 12:52:53] 2025-10-13 16:51:48,284 | INFO     | 
[2025-10-13 12:52:53] 2025-10-13 16:51:48,285 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-13 12:52:53] 2025-10-13 16:51:48,310 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 12:52:53] 2025-10-13 16:51:48,311 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 12:52:53] 2025-10-13 16:51:48,311 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 12:52:53] 2025-10-13 16:51:48,311 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 12:52:53] 2025-10-13 16:51:48,311 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 12:52:53] 2025-10-13 16:51:48,311 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 12:52:53] 2025-10-13 16:51:48,312 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 12:52:53] 2025-10-13 16:51:48,312 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 12:52:53] 2025-10-13 16:51:48,312 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 12:52:53] 2025-10-13 16:51:48,312 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 12:52:53] 2025-10-13 16:51:48,312 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 12:52:53] 2025-10-13 16:51:48,312 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 12:52:53] 2025-10-13 16:51:48,312 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 12:52:53] 2025-10-13 16:51:48,312 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 12:52:53] 2025-10-13 16:51:48,312 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 12:52:53] 2025-10-13 16:51:48,313 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 12:52:53] 2025-10-13 16:51:48,313 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 12:52:53] 2025-10-13 16:51:48,313 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 12:52:53] 2025-10-13 16:51:48,313 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 12:52:53] 2025-10-13 16:51:48,313 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 12:52:53] 2025-10-13 16:51:48,313 | INFO     | job 6840750243 has completed (purged errors)
[2025-10-13 12:52:53] 2025-10-13 16:51:48,313 | INFO     | overall cleanup function is called
[2025-10-13 12:52:53] 2025-10-13 16:51:49,323 | INFO     | --- collectZombieJob: --- 10, [3342406]
[2025-10-13 12:52:53] 2025-10-13 16:51:49,323 | INFO     | zombie collector waiting for pid 3342406
[2025-10-13 12:52:53] 2025-10-13 16:51:49,324 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 12:52:53] 2025-10-13 16:51:49,324 | INFO     | collected zombie processes
[2025-10-13 12:52:53] 2025-10-13 16:51:49,324 | INFO     | will attempt to kill all subprocesses of pid=3342406
[2025-10-13 12:52:53] 2025-10-13 16:51:49,714 | INFO     | process IDs to be killed: [3342406] (in reverse order)
[2025-10-13 12:52:53] 2025-10-13 16:51:49,798 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 12:52:53] 2025-10-13 16:51:49,799 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 12:52:53] 2025-10-13 16:51:49,891 | INFO     | did not find any defunct processes belonging to 3342406
[2025-10-13 12:52:53] 2025-10-13 16:51:49,982 | INFO     | did not find any defunct processes belonging to 3342406
[2025-10-13 12:52:53] 2025-10-13 16:51:49,982 | INFO     | ready for new job
[2025-10-13 12:52:53] 2025-10-13 16:51:49,983 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 12:52:53] 2025-10-13 16:51:50,018 | INFO     | ***************************************
[2025-10-13 12:52:53] 2025-10-13 16:51:50,018 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 12:52:53] 2025-10-13 16:51:50,018 | INFO     | ***************************************
[2025-10-13 12:52:53] 2025-10-13 16:51:50,018 | INFO     | 
[2025-10-13 12:52:53] 2025-10-13 16:51:50,021 | INFO     | architecture information:
[2025-10-13 12:52:53] 2025-10-13 16:51:50,023 | INFO     | executing command: cat /etc/os-release
[2025-10-13 12:52:53] 2025-10-13 16:51:50,193 | INFO     | cat /etc/os-release:
[2025-10-13 12:52:53] NAME="CentOS Linux"
[2025-10-13 12:52:53] VERSION="7 (Core)"
[2025-10-13 12:52:53] ID="centos"
[2025-10-13 12:52:53] ID_LIKE="rhel fedora"
[2025-10-13 12:52:53] VERSION_ID="7"
[2025-10-13 12:52:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 12:52:53] ANSI_COLOR="0;31"
[2025-10-13 12:52:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 12:52:53] HOME_URL="https://www.centos.org/"
[2025-10-13 12:52:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 12:52:53] 
[2025-10-13 12:52:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 12:52:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 12:52:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 12:52:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 12:52:53] 
[2025-10-13 12:52:53] 2025-10-13 16:51:50,193 | INFO     | ***************************************
[2025-10-13 12:52:53] 2025-10-13 16:51:50,696 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-13 12:52:53] 2025-10-13 16:51:50,724 | INFO     | sufficient remaining disk space (53350498304 B)
[2025-10-13 12:52:53] 2025-10-13 16:51:50,725 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 12:52:53] 2025-10-13 16:51:50,725 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 12:52:53] 2025-10-13 16:51:50,725 | INFO     | update_server=False
[2025-10-13 12:52:53] 2025-10-13 16:51:50,725 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 12:52:53] 2025-10-13 16:51:50,726 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 12:52:53] 2025-10-13 16:51:50,789 | INFO     | all job control threads have been joined
[2025-10-13 12:52:53] 2025-10-13 16:51:51,028 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:52:53] 2025-10-13 16:51:51,029 | INFO     | aborting loop
[2025-10-13 12:52:53] 2025-10-13 16:51:51,472 | INFO     | all data control threads have been joined
[2025-10-13 12:52:53] 2025-10-13 16:51:51,483 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 12:52:53] 2025-10-13 16:51:51,733 | INFO     | [job] retrieve thread has finished
[2025-10-13 12:52:53] 2025-10-13 16:51:51,795 | INFO     | [job] control thread has finished
[2025-10-13 12:52:53] 2025-10-13 16:51:51,950 | INFO     | [payload] validate_post thread has finished
[2025-10-13 12:52:53] 2025-10-13 16:51:51,995 | INFO     | all payload control threads have been joined
[2025-10-13 12:52:53] 2025-10-13 16:51:52,034 | INFO     | [job] job monitor thread has finished
[2025-10-13 12:52:53] 2025-10-13 16:51:52,236 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 12:52:53] 2025-10-13 16:51:52,352 | INFO     | [job] validate thread has finished
[2025-10-13 12:52:53] 2025-10-13 16:51:52,358 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 12:52:53] 2025-10-13 16:51:52,478 | INFO     | [data] control thread has finished
[2025-10-13 12:52:53] 2025-10-13 16:51:52,734 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 12:52:53] 2025-10-13 16:51:52,738 | INFO     | [data] copytool_in thread has finished
[2025-10-13 12:52:53] 2025-10-13 16:51:53,001 | INFO     | [payload] control thread has finished
[2025-10-13 12:52:53] 2025-10-13 16:51:53,010 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 12:52:53] 2025-10-13 16:51:53,285 | INFO     | [payload] failed_post thread has finished
[2025-10-13 12:52:53] 2025-10-13 16:51:53,301 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:52:53] 2025-10-13 16:51:53,490 | INFO     | [data] copytool_out thread has finished
[2025-10-13 12:52:53] 2025-10-13 16:51:54,307 | INFO     | [job] queue monitor thread has finished
[2025-10-13 12:52:53] 2025-10-13 16:51:54,735 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 12:52:53] 2025-10-13 16:52:20,171 | INFO     | PID=3326794 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 12:52:53] 2025-10-13 16:52:20,172 | INFO     | .. there are 7 such processes running
[2025-10-13 12:52:53] 2025-10-13 16:52:20,173 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 12:52:53] 2025-10-13 16:52:20,173 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 12:52:53] 2025-10-13 16:52:20,173 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 12:52:53] 2025-10-13 16:52:44,808 | INFO     | [monitor] cgroup control has ended
[2025-10-13 12:52:53] 2025-10-13 16:52:45,342 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140574996887360)>', '<ExcThread(monitor, started 140573541398272)>']
[2025-10-13 12:52:53] 2025-10-13 16:52:46,339 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 12:52:53] 2025-10-13 16:52:46,339 | INFO     | [monitor] control thread has ended
[2025-10-13 12:52:53] 2025-10-13 16:52:50,368 | INFO     | all workflow threads have been joined
[2025-10-13 12:52:53] 2025-10-13 16:52:50,368 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 12:52:53] 2025-10-13 16:52:50,369 | INFO     | traces error code: 0
[2025-10-13 12:52:53] 2025-10-13 16:52:50,369 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 12:52:53] 2025-10-13 16:52:51,169 [wrapper] ==== pilot stdout END ====
[2025-10-13 12:52:53] 2025-10-13 16:52:51,215 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 12:52:53] 2025-10-13 16:52:51,253 [wrapper] pilotpid: 3326794
[2025-10-13 12:52:53] 2025-10-13 16:52:51,296 [wrapper] Pilot exit status: 0
[2025-10-13 12:52:53] 2025-10-13 16:52:51,474 [wrapper] pandaids: 6840750243
[2025-10-13 12:52:53] 2025-10-13 16:52:51,985 [wrapper] cleanup supervisor_pilot  216825 3326795
[2025-10-13 12:52:53] 2025-10-13 16:52:52,055 [wrapper] Test setup, not cleaning
[2025-10-13 12:52:53] 2025-10-13 16:52:52,109 [wrapper] apfmon messages muted
[2025-10-13 12:52:53] 2025-10-13 16:52:52,243 [wrapper] ==== wrapper stdout END ====
[2025-10-13 12:52:53] 2025-10-13 16:52:52,353 [wrapper] ==== wrapper stderr END ====
[2025-10-13 12:52:53]  *** Error codes and diagnostics ***
[2025-10-13 12:52:53]     "exeErrorCode": 0,
[2025-10-13 12:52:53]     "exeErrorDiag": "",
[2025-10-13 12:52:53]     "pilotErrorCode": 0,
[2025-10-13 12:52:53]     "pilotErrorDiag": "",
[2025-10-13 12:52:53]  *** Listing of results directory ***
[2025-10-13 12:52:53] total 429756
[2025-10-13 12:52:53] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 17:12 queuedata.json
[2025-10-13 12:52:53] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 17:12 pilot3.tar.gz
[2025-10-13 12:52:53] -rwx------. 1 boincer umatlas     36292 Oct 12 17:13 runpilot2-wrapper.sh
[2025-10-13 12:52:53] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 12:52:53] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:01 run_atlas
[2025-10-13 12:52:53] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:01 job.xml
[2025-10-13 12:52:53] -rw-r--r--. 2 boincer umatlas 223097007 Oct 13 00:01 EVNT.46676267._004775.pool.root.1
[2025-10-13 12:52:53] -rw-r--r--. 2 boincer umatlas    569675 Oct 13 00:01 input.tar.gz
[2025-10-13 12:52:53] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:01 start_atlas.sh
[2025-10-13 12:52:53] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:01 shared
[2025-10-13 12:52:53] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:01 boinc_lockfile
[2025-10-13 12:52:53] -rw-r--r--. 1 boincer umatlas      2548 Oct 13 00:01 pandaJob.out
[2025-10-13 12:52:53] -rw-------. 1 boincer umatlas    974373 Oct 13 00:03 agis_schedconf.cvmfs.json
[2025-10-13 12:52:53] drwx------. 5 boincer umatlas      4096 Oct 13 00:03 pilot3
[2025-10-13 12:52:53] -rw-r--r--. 1 boincer umatlas      6661 Oct 13 12:48 init_data.xml
[2025-10-13 12:52:53] -rw-------. 1 boincer umatlas 200437419 Oct 13 12:50 HITS.46676269._089622.pool.root.1
[2025-10-13 12:52:53] -rw-r--r--. 1 boincer umatlas       531 Oct 13 12:50 boinc_task_state.xml
[2025-10-13 12:52:53] -rw-------. 1 boincer umatlas      1065 Oct 13 12:51 memory_monitor_summary.json
[2025-10-13 12:52:53] -rw-------. 1 boincer umatlas   1560580 Oct 13 12:51 agis_ddmendpoints.agis.ALL.json
[2025-10-13 12:52:53] -rw-------. 1 boincer umatlas    883340 Oct 13 12:51 log.46676269._089622.job.log.tgz.1
[2025-10-13 12:52:53] -rw-------. 1 boincer umatlas      7847 Oct 13 12:51 heartbeat.json
[2025-10-13 12:52:53] -rw-------. 1 boincer umatlas        95 Oct 13 12:52 pilot_heartbeat.json
[2025-10-13 12:52:53] -rw-------. 1 boincer umatlas      4823 Oct 13 12:52 pilotlog.txt
[2025-10-13 12:52:53] -rw-------. 1 boincer umatlas   5430962 Oct 13 12:52 log.46676269._089622.job.log.1
[2025-10-13 12:52:53] -rw-------. 1 boincer umatlas       357 Oct 13 12:52 output.list
[2025-10-13 12:52:53] -rw-r--r--. 1 boincer umatlas        28 Oct 13 12:52 wrapper_checkpoint.txt
[2025-10-13 12:52:53] -rw-r--r--. 1 boincer umatlas       620 Oct 13 12:52 runtime_log
[2025-10-13 12:52:53] -rw-------. 1 boincer umatlas   6338560 Oct 13 12:52 result.tar.gz
[2025-10-13 12:52:53] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 12:52 boinc_mmap_file
[2025-10-13 12:52:53] -rw-------. 1 boincer umatlas       661 Oct 13 12:52 vq6MDmjYIS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7alNDm5Q7KDn.diag
[2025-10-13 12:52:53] -rw-r--r--. 1 boincer umatlas      8706 Oct 13 12:52 runtime_log.err
[2025-10-13 12:52:53] -rw-r--r--. 1 boincer umatlas     21087 Oct 13 12:52 stderr.txt
[2025-10-13 12:52:53] HITS file was successfully produced:
[2025-10-13 12:52:53] -rw-------. 1 boincer umatlas 200437419 Oct 13 12:50 shared/HITS.pool.root.1
[2025-10-13 12:52:53]  *** Contents of shared directory: ***
[2025-10-13 12:52:53] total 420388
[2025-10-13 12:52:53] -rw-r--r--. 2 boincer umatlas 223097007 Oct 13 00:01 ATLAS.root_0
[2025-10-13 12:52:53] -rw-r--r--. 2 boincer umatlas    569675 Oct 13 00:01 input.tar.gz
[2025-10-13 12:52:53] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:01 start_atlas.sh
[2025-10-13 12:52:53] -rw-------. 1 boincer umatlas 200437419 Oct 13 12:50 HITS.pool.root.1
[2025-10-13 12:52:53] -rw-------. 1 boincer umatlas   6338560 Oct 13 12:52 result.tar.gz
12:52:54 (3319955): run_atlas exited; CPU time 58760.867662
12:52:54 (3319955): called boinc_finish(0)

</stderr_txt>
]]>

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