Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:30:56 (30788): wrapper (7.7.26015): starting
21:30:56 (30788): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 21:30:56] Arguments: --nthreads 12
[2025-10-12 21:30:56] Threads: 12
[2025-10-12 21:30:56] Checking for CVMFS
[2025-10-12 21:30:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 21:30:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 21:30:56] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 21:30:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 21:30:56] 2.11.2.0 2991 223618 102732 151643 0 57 15151553 20275200 1 130560 1 110125905 99.983 13481077 12489 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 21:30:56] CVMFS is ok
[2025-10-12 21:30:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 21:30:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 21:30:56] Further information can be found at the LHC@home message board.
[2025-10-12 21:30:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:30:56] Checking for apptainer binary...
[2025-10-12 21:30:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 21:30:56] Running /usr/bin/apptainer --version
[2025-10-12 21:30:56] apptainer version 1.3.2-1.el7
[2025-10-12 21:30:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:30:57] c-205-32.aglt2.org
[2025-10-12 21:30:57] apptainer works
[2025-10-12 21:30:57] Set ATHENA_PROC_NUMBER=12
[2025-10-12 21:30:57] Set ATHENA_CORE_NUMBER=12
[2025-10-12 21:30:58] Starting ATLAS job with PandaID=6840531856
[2025-10-12 21:30:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:45:25]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:45:25]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840531856/log.46676269._085877.job.log.tgz.1
[2025-10-12 22:45:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/59/df/log.46676269._085877.job.log.tgz.1
[2025-10-12 22:45:25]  workdir=None
[2025-10-12 22:45:25] ]
[2025-10-12 22:45:25] 2025-10-13 02:44:34,471 | INFO     | transferring file log.46676269._085877.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840531856/log.46676269._085877.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 22:45:25] 2025-10-13 02:44:34,472 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840531856/log.46676269._085877.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._085877.job
[2025-10-12 22:45:25] 2025-10-13 02:44:34,492 | INFO     | adding to output.list: log.46676269._085877.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/59/df/log.46676269._085877.job.log.tg
[2025-10-12 22:45:25] 2025-10-13 02:44:34,493 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 22:45:25] 2025-10-13 02:44:34,493 | INFO     | summary of transferred files:
[2025-10-12 22:45:25] 2025-10-13 02:44:34,493 | INFO     |  -- lfn=log.46676269._085877.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 22:45:25] 2025-10-13 02:44:34,494 | INFO     | stage-out finished correctly
[2025-10-12 22:45:25] 2025-10-13 02:44:35,376 | INFO     | time since job start (4403s) is within the limit (172800.0s)
[2025-10-12 22:45:25] 2025-10-13 02:44:36,257 | WARNING  | process 8582 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 22:45:25] 2025-10-13 02:44:36,257 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840531856/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 22:45:25] 2025-10-13 02:44:36,352 | INFO     | number of running child processes to parent process 8582: 1
[2025-10-12 22:45:25] 2025-10-13 02:44:36,353 | INFO     | maximum number of monitored processes: 6
[2025-10-12 22:45:25] 2025-10-13 02:44:36,409 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 22:45:25] 2025-10-13 02:44:37,382 | INFO     | time since job start (4405s) is within the limit (172800.0s)
[2025-10-12 22:45:25] 2025-10-13 02:44:38,856 | INFO     | monitor loop #328: job 0:6840531856 is in state 'finished'
[2025-10-12 22:45:25] 2025-10-13 02:44:38,856 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:45:25] 2025-10-13 02:44:39,159 | INFO     | job 6840531856 has state=finished
[2025-10-12 22:45:25] 2025-10-13 02:44:39,159 | INFO     | preparing for final server update for job 6840531856 in state='finished'
[2025-10-12 22:45:25] 2025-10-13 02:44:39,160 | INFO     | this job has now completed (state=finished)
[2025-10-12 22:45:25] 2025-10-13 02:44:39,160 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 22:45:25] 2025-10-13 02:44:39,160 | INFO     | log transfer has been attempted: DONE
[2025-10-12 22:45:25] 2025-10-13 02:44:39,160 | INFO     | job 6840531856 has finished - writing final server update
[2025-10-12 22:45:25] 2025-10-13 02:44:39,161 | INFO     | total number of processed events: 400 (read)
[2025-10-12 22:45:25] 2025-10-13 02:44:39,162 | INFO     | executing command: lscpu
[2025-10-12 22:45:25] 2025-10-13 02:44:39,193 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 22:45:25] 2025-10-13 02:44:39,387 | INFO     | time since job start (4407s) is within the limit (172800.0s)
[2025-10-12 22:45:25] 2025-10-13 02:44:41,359 | INFO     | monitor loop #329: job 0:6840531856 is in state 'finished'
[2025-10-12 22:45:25] 2025-10-13 02:44:41,360 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:45:25] 2025-10-13 02:44:41,393 | INFO     | time since job start (4409s) is within the limit (172800.0s)
[2025-10-12 22:45:25] 2025-10-13 02:44:43,394 | INFO     | time since job start (4411s) is within the limit (172800.0s)
[2025-10-12 22:45:25] 2025-10-13 02:44:43,703 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 22:45:25] 2025-10-13 02:44:43,707 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-10-12 22:45:25] 2025-10-13 02:44:43,709 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840531856/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 22:45:25] 2025-10-13 02:44:43,709 | INFO     | extracted standard info from prmon json
[2025-10-12 22:45:25] 2025-10-13 02:44:43,710 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 22:45:25] 2025-10-13 02:44:43,710 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 22:45:25] 2025-10-13 02:44:43,710 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 22:45:25] 2025-10-13 02:44:43,710 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:45:25] 2025-10-13 02:44:43,712 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:45:25] 2025-10-13 02:44:43,712 | INFO     | sum of square deviations: 85136480.0
[2025-10-12 22:45:25] 2025-10-13 02:44:43,712 | INFO     | sum of deviations: -8152488716.0
[2025-10-12 22:45:25] 2025-10-13 02:44:43,712 | INFO     | mean x: 1760321357.0
[2025-10-12 22:45:25] 2025-10-13 02:44:43,712 | INFO     | mean y: 2809092.0
[2025-10-12 22:45:25] 2025-10-13 02:44:43,713 | INFO     | -- intersect: 168567447886.98315
[2025-10-12 22:45:25] 2025-10-13 02:44:43,713 | INFO     | intersect: 168567447886.98315
[2025-10-12 22:45:25] 2025-10-13 02:44:43,713 | INFO     | chi2: 0.04875797267329541
[2025-10-12 22:45:25] 2025-10-13 02:44:43,713 | INFO     | -- intersect: 168567447886.98315
[2025-10-12 22:45:25] 2025-10-13 02:44:43,713 | INFO     | current memory leak: -95.76 B/s (using 65 data points, chi2=0.05)
[2025-10-12 22:45:25] 2025-10-13 02:44:43,713 | INFO     | could have reported an average CPU frequency of 2037 MHz (6 samples)
[2025-10-12 22:45:25] 2025-10-13 02:44:43,714 | INFO     | ..............................
[2025-10-12 22:45:25] 2025-10-13 02:44:43,714 | INFO     | . Timing measurements:
[2025-10-12 22:45:25] 2025-10-13 02:44:43,714 | INFO     | . get job = 0 s
[2025-10-12 22:45:25] 2025-10-13 02:44:43,714 | INFO     | . initial setup = 2 s
[2025-10-12 22:45:25] 2025-10-13 02:44:43,714 | INFO     | . payload setup = 6 s
[2025-10-12 22:45:25] 2025-10-13 02:44:43,714 | INFO     | . stage-in = 0 s
[2025-10-12 22:45:25] 2025-10-13 02:44:43,714 | INFO     | . payload execution = 4375 s
[2025-10-12 22:45:25] 2025-10-13 02:44:43,714 | INFO     | . stage-out = 0 s
[2025-10-12 22:45:25] 2025-10-13 02:44:43,714 | INFO     | . log creation = 0 s
[2025-10-12 22:45:25] 2025-10-13 02:44:43,714 | INFO     | ..............................
[2025-10-12 22:45:25] 2025-10-13 02:44:44,257 | INFO     | 
[2025-10-12 22:45:25] 2025-10-13 02:44:44,257 | INFO     | job summary report
[2025-10-12 22:45:25] 2025-10-13 02:44:44,263 | INFO     | --------------------------------------------------
[2025-10-12 22:45:25] 2025-10-13 02:44:44,263 | INFO     | PanDA job id: 6840531856
[2025-10-12 22:45:25] 2025-10-13 02:44:44,263 | INFO     | task id: 46676269
[2025-10-12 22:45:25] 2025-10-13 02:44:44,263 | INFO     | errors: (none)
[2025-10-12 22:45:25] 2025-10-13 02:44:44,263 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:45:25] 2025-10-13 02:44:44,264 | INFO     | pilot state: finished 
[2025-10-12 22:45:25] 2025-10-13 02:44:44,264 | INFO     | transexitcode: 0
[2025-10-12 22:45:25] 2025-10-13 02:44:44,264 | INFO     | exeerrorcode: 0
[2025-10-12 22:45:25] 2025-10-13 02:44:44,264 | INFO     | exeerrordiag: 
[2025-10-12 22:45:25] 2025-10-13 02:44:44,264 | INFO     | exitcode: 0
[2025-10-12 22:45:25] 2025-10-13 02:44:44,264 | INFO     | exitmsg: OK
[2025-10-12 22:45:25] 2025-10-13 02:44:44,264 | INFO     | cpuconsumptiontime: 48189 s
[2025-10-12 22:45:25] 2025-10-13 02:44:44,264 | INFO     | nevents: 400
[2025-10-12 22:45:25] 2025-10-13 02:44:44,265 | INFO     | neventsw: 0
[2025-10-12 22:45:25] 2025-10-13 02:44:44,265 | INFO     | pid: 8582
[2025-10-12 22:45:25] 2025-10-13 02:44:44,265 | INFO     | pgrp: 8582
[2025-10-12 22:45:25] 2025-10-13 02:44:44,265 | INFO     | corecount: 12
[2025-10-12 22:45:25] 2025-10-13 02:44:44,265 | INFO     | event service: False
[2025-10-12 22:45:25] 2025-10-13 02:44:44,265 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 4385: 2375223, 4386: 2384221, 4388: 2384277, 4395: 2384599}
[2025-10-12 22:45:25] 2025-10-13 02:44:44,265 | INFO     | --------------------------------------------------
[2025-10-12 22:45:25] 2025-10-13 02:44:44,265 | INFO     | 
[2025-10-12 22:45:25] 2025-10-13 02:44:44,265 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 22:45:25] 2025-10-13 02:44:44,374 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:45:25] 2025-10-13 02:44:44,374 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:45:25] 2025-10-13 02:44:44,374 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:45:25] 2025-10-13 02:44:44,375 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:45:25] 2025-10-13 02:44:44,375 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:45:25] 2025-10-13 02:44:44,375 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:45:25] 2025-10-13 02:44:44,375 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:45:25] 2025-10-13 02:44:44,375 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:45:25] 2025-10-13 02:44:44,376 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:45:25] 2025-10-13 02:44:44,376 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:45:25] 2025-10-13 02:44:44,376 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:45:25] 2025-10-13 02:44:44,376 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:45:25] 2025-10-13 02:44:44,376 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:45:25] 2025-10-13 02:44:44,376 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:45:25] 2025-10-13 02:44:44,377 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:45:25] 2025-10-13 02:44:44,377 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:45:25] 2025-10-13 02:44:44,377 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:45:25] 2025-10-13 02:44:44,377 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:45:25] 2025-10-13 02:44:44,377 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:45:25] 2025-10-13 02:44:44,377 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:45:25] 2025-10-13 02:44:44,378 | INFO     | job 6840531856 has completed (purged errors)
[2025-10-12 22:45:25] 2025-10-13 02:44:44,378 | INFO     | overall cleanup function is called
[2025-10-12 22:45:25] 2025-10-13 02:44:45,385 | INFO     | --- collectZombieJob: --- 10, [8582]
[2025-10-12 22:45:25] 2025-10-13 02:44:45,385 | INFO     | zombie collector waiting for pid 8582
[2025-10-12 22:45:25] 2025-10-13 02:44:45,385 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:45:25] 2025-10-13 02:44:45,386 | INFO     | collected zombie processes
[2025-10-12 22:45:25] 2025-10-13 02:44:45,386 | INFO     | will attempt to kill all subprocesses of pid=8582
[2025-10-12 22:45:25] 2025-10-13 02:44:45,476 | INFO     | process IDs to be killed: [8582] (in reverse order)
[2025-10-12 22:45:25] 2025-10-13 02:44:45,525 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:45:25] 2025-10-13 02:44:45,525 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:45:25] 2025-10-13 02:44:45,529 | INFO     | did not find any defunct processes belonging to 8582
[2025-10-12 22:45:25] 2025-10-13 02:44:45,531 | INFO     | did not find any defunct processes belonging to 8582
[2025-10-12 22:45:25] 2025-10-13 02:44:45,531 | INFO     | ready for new job
[2025-10-12 22:45:25] 2025-10-13 02:44:45,531 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:45:25] 2025-10-13 02:44:45,532 | INFO     | ***************************************
[2025-10-12 22:45:25] 2025-10-13 02:44:45,532 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:45:25] 2025-10-13 02:44:45,533 | INFO     | ***************************************
[2025-10-12 22:45:25] 2025-10-13 02:44:45,533 | INFO     | 
[2025-10-12 22:45:25] 2025-10-13 02:44:45,533 | INFO     | architecture information:
[2025-10-12 22:45:25] 2025-10-13 02:44:45,534 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:45:25] 2025-10-13 02:44:45,548 | INFO     | cat /etc/os-release:
[2025-10-12 22:45:25] NAME="CentOS Linux"
[2025-10-12 22:45:25] VERSION="7 (Core)"
[2025-10-12 22:45:25] ID="centos"
[2025-10-12 22:45:25] ID_LIKE="rhel fedora"
[2025-10-12 22:45:25] VERSION_ID="7"
[2025-10-12 22:45:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:45:25] ANSI_COLOR="0;31"
[2025-10-12 22:45:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:45:25] HOME_URL="https://www.centos.org/"
[2025-10-12 22:45:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:45:25] 
[2025-10-12 22:45:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:45:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:45:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:45:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:45:25] 
[2025-10-12 22:45:25] 2025-10-13 02:44:45,549 | INFO     | ***************************************
[2025-10-12 22:45:25] 2025-10-13 02:44:46,052 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 22:45:25] 2025-10-13 02:44:46,068 | INFO     | sufficient remaining disk space (29352787968 B)
[2025-10-12 22:45:25] 2025-10-13 02:44:46,068 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:45:25] 2025-10-13 02:44:46,068 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:45:25] 2025-10-13 02:44:46,068 | INFO     | update_server=False
[2025-10-12 22:45:25] 2025-10-13 02:44:46,069 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:45:25] 2025-10-13 02:44:46,069 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:45:25] 2025-10-13 02:44:46,186 | INFO     | all payload control threads have been joined
[2025-10-12 22:45:25] 2025-10-13 02:44:46,366 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 22:45:25] 2025-10-13 02:44:46,366 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 22:45:25] 2025-10-13 02:44:46,366 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:45:25] 2025-10-13 02:44:46,366 | INFO     | will abort loop
[2025-10-12 22:45:25] 2025-10-13 02:44:46,902 | INFO     | all data control threads have been joined
[2025-10-12 22:45:25] 2025-10-13 02:44:47,004 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:45:25] 2025-10-13 02:44:47,074 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:45:25] 2025-10-13 02:44:47,083 | INFO     | [job] validate thread has finished
[2025-10-12 22:45:25] 2025-10-13 02:44:47,192 | INFO     | [payload] control thread has finished
[2025-10-12 22:45:25] 2025-10-13 02:44:47,274 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:45:25] 2025-10-13 02:44:47,372 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:45:25] 2025-10-13 02:44:47,499 | INFO     | all job control threads have been joined
[2025-10-12 22:45:25] 2025-10-13 02:44:47,551 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:45:25] 2025-10-13 02:44:47,579 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:45:25] 2025-10-13 02:44:47,585 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:45:25] 2025-10-13 02:44:47,907 | INFO     | [data] control thread has finished
[2025-10-12 22:45:25] 2025-10-13 02:44:48,075 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:45:25] 2025-10-13 02:44:48,154 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:45:25] 2025-10-13 02:44:48,433 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:45:25] 2025-10-13 02:44:48,505 | INFO     | [job] control thread has finished
[2025-10-12 22:45:25] 2025-10-13 02:44:48,809 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:45:25] 2025-10-13 02:44:49,815 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:45:25] 2025-10-13 02:44:51,010 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:45:25] 2025-10-13 02:44:56,302 | INFO     | job.realtimelogging is not enabled
[2025-10-12 22:45:25] 2025-10-13 02:44:57,307 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:45:25] 2025-10-13 02:45:16,592 | INFO     | PID=2177 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 22:45:25] 2025-10-13 02:45:16,593 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:45:25] 2025-10-13 02:45:16,593 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:45:25] 2025-10-13 02:45:16,593 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:45:25] 2025-10-13 02:45:19,122 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:45:25] 2025-10-13 02:45:19,691 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140689212749632)>', '<ExcThread(monitor, started 140688524027648)>']
[2025-10-12 22:45:25] 2025-10-13 02:45:20,614 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:45:25] 2025-10-13 02:45:20,614 | INFO     | [monitor] control thread has ended
[2025-10-12 22:45:25] 2025-10-13 02:45:24,701 | INFO     | all workflow threads have been joined
[2025-10-12 22:45:25] 2025-10-13 02:45:24,701 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:45:25] 2025-10-13 02:45:24,702 | INFO     | traces error code: 0
[2025-10-12 22:45:25] 2025-10-13 02:45:24,702 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:45:25] 2025-10-13 02:45:24,808 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:45:25] 2025-10-13 02:45:24,811 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:45:25] 2025-10-13 02:45:24,815 [wrapper] pilotpid: 2177
[2025-10-12 22:45:25] 2025-10-13 02:45:24,818 [wrapper] Pilot exit status: 0
[2025-10-12 22:45:25] 2025-10-13 02:45:24,833 [wrapper] pandaids: 6840531856
[2025-10-12 22:45:25] 2025-10-13 02:45:24,871 [wrapper] cleanup supervisor_pilot  9859 2178
[2025-10-12 22:45:25] 2025-10-13 02:45:24,875 [wrapper] Test setup, not cleaning
[2025-10-12 22:45:25] 2025-10-13 02:45:24,879 [wrapper] apfmon messages muted
[2025-10-12 22:45:25] 2025-10-13 02:45:24,882 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:45:25] 2025-10-13 02:45:24,886 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:45:25]  *** Error codes and diagnostics ***
[2025-10-12 22:45:25]     "exeErrorCode": 0,
[2025-10-12 22:45:25]     "exeErrorDiag": "",
[2025-10-12 22:45:25]     "pilotErrorCode": 0,
[2025-10-12 22:45:25]     "pilotErrorDiag": "",
[2025-10-12 22:45:25]  *** Listing of results directory ***
[2025-10-12 22:45:25] total 420556
[2025-10-12 22:45:25] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 13:57 pilot3.tar.gz
[2025-10-12 22:45:25] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 14:16 queuedata.json
[2025-10-12 22:45:25] -rwx------ 1 boincer umatlas     36292 Oct 12 14:16 runpilot2-wrapper.sh
[2025-10-12 22:45:25] -rw-r--r-- 1 boincer umatlas       100 Oct 12 21:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:45:25] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 21:30 run_atlas
[2025-10-12 22:45:25] -rw-r--r-- 1 boincer umatlas       105 Oct 12 21:30 job.xml
[2025-10-12 22:45:25] -rw-r--r-- 2 boincer umatlas 224044927 Oct 12 21:30 EVNT.46676267._004395.pool.root.1
[2025-10-12 22:45:25] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 21:30 start_atlas.sh
[2025-10-12 22:45:25] drwxrwx--x 2 boincer umatlas      4096 Oct 12 21:30 shared
[2025-10-12 22:45:25] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 21:30 input.tar.gz
[2025-10-12 22:45:25] -rw-r--r-- 1 boincer umatlas         0 Oct 12 21:30 boinc_lockfile
[2025-10-12 22:45:25] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 21:30 pandaJob.out
[2025-10-12 22:45:25] -rw------- 1 boincer umatlas    975595 Oct 12 21:31 agis_schedconf.cvmfs.json
[2025-10-12 22:45:25] -rw------- 1 boincer umatlas   1560580 Oct 12 21:31 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:45:25] drwx------ 5 boincer umatlas      4096 Oct 12 21:31 pilot3
[2025-10-12 22:45:25] -rw-r--r-- 1 boincer umatlas      5953 Oct 12 22:39 init_data.xml
[2025-10-12 22:45:25] -rw------- 1 boincer umatlas 200665090 Oct 12 22:44 HITS.46676269._085877.pool.root.1
[2025-10-12 22:45:25] -rw-r--r-- 1 boincer umatlas       529 Oct 12 22:44 boinc_task_state.xml
[2025-10-12 22:45:25] -rw------- 1 boincer umatlas      1049 Oct 12 22:44 memory_monitor_summary.json
[2025-10-12 22:45:25] -rw------- 1 boincer umatlas    377005 Oct 12 22:44 log.46676269._085877.job.log.tgz.1
[2025-10-12 22:45:25] -rw------- 1 boincer umatlas      7857 Oct 12 22:44 heartbeat.json
[2025-10-12 22:45:25] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 22:44 boinc_mmap_file
[2025-10-12 22:45:25] -rw-r--r-- 1 boincer umatlas        27 Oct 12 22:44 wrapper_checkpoint.txt
[2025-10-12 22:45:25] -rw------- 1 boincer umatlas        95 Oct 12 22:45 pilot_heartbeat.json
[2025-10-12 22:45:25] -rw------- 1 boincer umatlas      5003 Oct 12 22:45 pilotlog.txt
[2025-10-12 22:45:25] -rw------- 1 boincer umatlas    640040 Oct 12 22:45 log.46676269._085877.job.log.1
[2025-10-12 22:45:25] -rw------- 1 boincer umatlas       357 Oct 12 22:45 output.list
[2025-10-12 22:45:25] -rw-r--r-- 1 boincer umatlas       620 Oct 12 22:45 runtime_log
[2025-10-12 22:45:25] -rw------- 1 boincer umatlas   1034240 Oct 12 22:45 result.tar.gz
[2025-10-12 22:45:25] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 22:45 runtime_log.err
[2025-10-12 22:45:25] -rw------- 1 boincer umatlas       659 Oct 12 22:45 pENODmCnFS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmh0kNDmiuKvGn.diag
[2025-10-12 22:45:25] -rw-r--r-- 1 boincer umatlas     22217 Oct 12 22:45 stderr.txt
[2025-10-12 22:45:25] HITS file was successfully produced:
[2025-10-12 22:45:25] -rw------- 1 boincer umatlas 200665090 Oct 12 22:44 shared/HITS.pool.root.1
[2025-10-12 22:45:25]  *** Contents of shared directory: ***
[2025-10-12 22:45:25] total 416352
[2025-10-12 22:45:25] -rw-r--r-- 2 boincer umatlas 224044927 Oct 12 21:30 ATLAS.root_0
[2025-10-12 22:45:25] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 21:30 start_atlas.sh
[2025-10-12 22:45:25] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 21:30 input.tar.gz
[2025-10-12 22:45:25] -rw------- 1 boincer umatlas 200665090 Oct 12 22:44 HITS.pool.root.1
[2025-10-12 22:45:25] -rw------- 1 boincer umatlas   1034240 Oct 12 22:45 result.tar.gz
22:45:26 (30788): run_atlas exited; CPU time 48166.525076
22:45:26 (30788): called boinc_finish(0)

</stderr_txt>
]]>

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