Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:35:06 (12952): wrapper (7.7.26015): starting
21:35:06 (12952): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 21:35:06] Arguments: --nthreads 12
[2025-10-12 21:35:06] Threads: 12
[2025-10-12 21:35:06] Checking for CVMFS
[2025-10-12 21:35:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 21:35:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 21:35:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 21:35:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 21:35:07] 2.11.2.0 3103 13644 85992 151643 0 57 11390601 20275200 1 130560 0 14229748 99.993 455329 46306 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 21:35:07] CVMFS is ok
[2025-10-12 21:35:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 21:35:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 21:35:07] Further information can be found at the LHC@home message board.
[2025-10-12 21:35:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:35:07] Checking for apptainer binary...
[2025-10-12 21:35:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 21:35:07] Running /usr/bin/apptainer --version
[2025-10-12 21:35:07] apptainer version 1.3.2-1.el7
[2025-10-12 21:35:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:35:08] c-115-41.aglt2.org
[2025-10-12 21:35:08] apptainer works
[2025-10-12 21:35:08] Set ATHENA_PROC_NUMBER=12
[2025-10-12 21:35:08] Set ATHENA_CORE_NUMBER=12
[2025-10-12 21:35:08] Starting ATLAS job with PandaID=6840750288
[2025-10-12 21:35:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:41:52]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:41:52]  replicas=None
[2025-10-12 22:41:52]  scope=mc23_13p6TeV
[2025-10-12 22:41:52]  status=None
[2025-10-12 22:41:52]  status_code=0
[2025-10-12 22:41:52]  storage_token=
[2025-10-12 22:41:52]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840750288/log.46676269._089660.job.log.tgz.1
[2025-10-12 22:41:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a4/46/log.46676269._089660.job.log.tgz.1
[2025-10-12 22:41:52]  workdir=None
[2025-10-12 22:41:52] ]
[2025-10-12 22:41:52] 2025-10-13 02:41:12,636 | INFO     | transferring file log.46676269._089660.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840750288/log.46676269._089660.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 22:41:52] 2025-10-13 02:41:12,637 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840750288/log.46676269._089660.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._089660.job
[2025-10-12 22:41:52] 2025-10-13 02:41:12,663 | INFO     | adding to output.list: log.46676269._089660.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a4/46/log.46676269._089660.job.log.tg
[2025-10-12 22:41:52] 2025-10-13 02:41:12,664 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 22:41:52] 2025-10-13 02:41:12,665 | INFO     | summary of transferred files:
[2025-10-12 22:41:52] 2025-10-13 02:41:12,665 | INFO     |  -- lfn=log.46676269._089660.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 22:41:52] 2025-10-13 02:41:12,665 | INFO     | stage-out finished correctly
[2025-10-12 22:41:52] 2025-10-13 02:41:13,044 | INFO     | time since job start (3951s) is within the limit (172800.0s)
[2025-10-12 22:41:52] 2025-10-13 02:41:15,050 | INFO     | time since job start (3953s) is within the limit (172800.0s)
[2025-10-12 22:41:52] 2025-10-13 02:41:15,440 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 22:41:52] 2025-10-13 02:41:15,748 | INFO     | job 6840750288 has state=finished
[2025-10-12 22:41:52] 2025-10-13 02:41:15,749 | INFO     | preparing for final server update for job 6840750288 in state='finished'
[2025-10-12 22:41:52] 2025-10-13 02:41:15,749 | INFO     | this job has now completed (state=finished)
[2025-10-12 22:41:52] 2025-10-13 02:41:15,749 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 22:41:52] 2025-10-13 02:41:15,750 | INFO     | log transfer has been attempted: DONE
[2025-10-12 22:41:52] 2025-10-13 02:41:15,750 | INFO     | job 6840750288 has finished - writing final server update
[2025-10-12 22:41:52] 2025-10-13 02:41:15,750 | INFO     | total number of processed events: 400 (read)
[2025-10-12 22:41:52] 2025-10-13 02:41:15,751 | INFO     | executing command: lscpu
[2025-10-12 22:41:52] 2025-10-13 02:41:15,779 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 22:41:52] 2025-10-13 02:41:16,260 | WARNING  | process 23440 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 22:41:52] 2025-10-13 02:41:16,260 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840750288/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 22:41:52] 2025-10-13 02:41:16,347 | INFO     | number of running child processes to parent process 23440: 1
[2025-10-12 22:41:52] 2025-10-13 02:41:16,347 | INFO     | maximum number of monitored processes: 6
[2025-10-12 22:41:52] 2025-10-13 02:41:17,055 | INFO     | time since job start (3955s) is within the limit (172800.0s)
[2025-10-12 22:41:52] 2025-10-13 02:41:18,849 | INFO     | monitor loop #295: job 0:6840750288 is in state 'finished'
[2025-10-12 22:41:52] 2025-10-13 02:41:18,849 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:41:52] 2025-10-13 02:41:19,060 | INFO     | time since job start (3957s) is within the limit (172800.0s)
[2025-10-12 22:41:52] 2025-10-13 02:41:20,344 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 22:41:52] 2025-10-13 02:41:20,347 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1729.0833333333333
[2025-10-12 22:41:52] 2025-10-13 02:41:20,350 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840750288/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 22:41:52] 2025-10-13 02:41:20,350 | INFO     | extracted standard info from prmon json
[2025-10-12 22:41:52] 2025-10-13 02:41:20,350 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 22:41:52] 2025-10-13 02:41:20,350 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 22:41:52] 2025-10-13 02:41:20,350 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 22:41:52] 2025-10-13 02:41:20,351 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:41:52] 2025-10-13 02:41:20,352 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:41:52] 2025-10-13 02:41:20,352 | INFO     | sum of square deviations: 60482994.5
[2025-10-12 22:41:52] 2025-10-13 02:41:20,352 | INFO     | sum of deviations: -6190083214.0
[2025-10-12 22:41:52] 2025-10-13 02:41:20,352 | INFO     | mean x: 1760321394.5
[2025-10-12 22:41:52] 2025-10-13 02:41:20,353 | INFO     | mean y: 2806163.9655172415
[2025-10-12 22:41:52] 2025-10-13 02:41:20,353 | INFO     | -- intersect: 180161477298.2051
[2025-10-12 22:41:52] 2025-10-13 02:41:20,353 | INFO     | intersect: 180161477298.2051
[2025-10-12 22:41:52] 2025-10-13 02:41:20,353 | INFO     | chi2: 0.04636322824299134
[2025-10-12 22:41:52] 2025-10-13 02:41:20,353 | INFO     | -- intersect: 180161477298.2051
[2025-10-12 22:41:52] 2025-10-13 02:41:20,353 | INFO     | current memory leak: -102.34 B/s (using 58 data points, chi2=0.05)
[2025-10-12 22:41:52] 2025-10-13 02:41:20,353 | INFO     | could have reported an average CPU frequency of 2159 MHz (6 samples)
[2025-10-12 22:41:52] 2025-10-13 02:41:20,354 | INFO     | ..............................
[2025-10-12 22:41:52] 2025-10-13 02:41:20,354 | INFO     | . Timing measurements:
[2025-10-12 22:41:52] 2025-10-13 02:41:20,354 | INFO     | . get job = 0 s
[2025-10-12 22:41:52] 2025-10-13 02:41:20,354 | INFO     | . initial setup = 2 s
[2025-10-12 22:41:52] 2025-10-13 02:41:20,354 | INFO     | . payload setup = 6 s
[2025-10-12 22:41:52] 2025-10-13 02:41:20,354 | INFO     | . stage-in = 0 s
[2025-10-12 22:41:52] 2025-10-13 02:41:20,354 | INFO     | . payload execution = 3922 s
[2025-10-12 22:41:52] 2025-10-13 02:41:20,354 | INFO     | . stage-out = 0 s
[2025-10-12 22:41:52] 2025-10-13 02:41:20,354 | INFO     | . log creation = 0 s
[2025-10-12 22:41:52] 2025-10-13 02:41:20,354 | INFO     | ..............................
[2025-10-12 22:41:52] 2025-10-13 02:41:20,429 | INFO     | 
[2025-10-12 22:41:52] 2025-10-13 02:41:20,429 | INFO     | job summary report
[2025-10-12 22:41:52] 2025-10-13 02:41:20,430 | INFO     | --------------------------------------------------
[2025-10-12 22:41:52] 2025-10-13 02:41:20,430 | INFO     | PanDA job id: 6840750288
[2025-10-12 22:41:52] 2025-10-13 02:41:20,430 | INFO     | task id: 46676269
[2025-10-12 22:41:52] 2025-10-13 02:41:20,430 | INFO     | errors: (none)
[2025-10-12 22:41:52] 2025-10-13 02:41:20,430 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:41:52] 2025-10-13 02:41:20,430 | INFO     | pilot state: finished 
[2025-10-12 22:41:52] 2025-10-13 02:41:20,431 | INFO     | transexitcode: 0
[2025-10-12 22:41:52] 2025-10-13 02:41:20,431 | INFO     | exeerrorcode: 0
[2025-10-12 22:41:52] 2025-10-13 02:41:20,431 | INFO     | exeerrordiag: 
[2025-10-12 22:41:52] 2025-10-13 02:41:20,431 | INFO     | exitcode: 0
[2025-10-12 22:41:52] 2025-10-13 02:41:20,431 | INFO     | exitmsg: OK
[2025-10-12 22:41:52] 2025-10-13 02:41:20,431 | INFO     | cpuconsumptiontime: 41816 s
[2025-10-12 22:41:52] 2025-10-13 02:41:20,431 | INFO     | nevents: 400
[2025-10-12 22:41:52] 2025-10-13 02:41:20,432 | INFO     | neventsw: 0
[2025-10-12 22:41:52] 2025-10-13 02:41:20,432 | INFO     | pid: 23440
[2025-10-12 22:41:52] 2025-10-13 02:41:20,432 | INFO     | pgrp: 23440
[2025-10-12 22:41:52] 2025-10-13 02:41:20,432 | INFO     | corecount: 12
[2025-10-12 22:41:52] 2025-10-13 02:41:20,432 | INFO     | event service: False
[2025-10-12 22:41:52] 2025-10-13 02:41:20,432 | INFO     | sizes: {0: 2348629, 1: 2348884, 6: 2349146, 12: 2349174, 3933: 2374987, 3934: 2383985, 3937: 2384169, 3942: 2384363}
[2025-10-12 22:41:52] 2025-10-13 02:41:20,433 | INFO     | --------------------------------------------------
[2025-10-12 22:41:52] 2025-10-13 02:41:20,433 | INFO     | 
[2025-10-12 22:41:52] 2025-10-13 02:41:20,433 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 22:41:52] 2025-10-13 02:41:20,459 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:41:52] 2025-10-13 02:41:20,460 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:41:52] 2025-10-13 02:41:20,460 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:41:52] 2025-10-13 02:41:20,460 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:41:52] 2025-10-13 02:41:20,460 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:41:52] 2025-10-13 02:41:20,460 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:41:52] 2025-10-13 02:41:20,460 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:41:52] 2025-10-13 02:41:20,461 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:41:52] 2025-10-13 02:41:20,461 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:41:52] 2025-10-13 02:41:20,461 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:41:52] 2025-10-13 02:41:20,461 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:41:52] 2025-10-13 02:41:20,461 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:41:52] 2025-10-13 02:41:20,461 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:41:52] 2025-10-13 02:41:20,461 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:41:52] 2025-10-13 02:41:20,462 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:41:52] 2025-10-13 02:41:20,462 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:41:52] 2025-10-13 02:41:20,462 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:41:52] 2025-10-13 02:41:20,462 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:41:52] 2025-10-13 02:41:20,462 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:41:52] 2025-10-13 02:41:20,462 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:41:52] 2025-10-13 02:41:20,463 | INFO     | job 6840750288 has completed (purged errors)
[2025-10-12 22:41:52] 2025-10-13 02:41:20,463 | INFO     | overall cleanup function is called
[2025-10-12 22:41:52] 2025-10-13 02:41:21,466 | INFO     | --- collectZombieJob: --- 10, [23440]
[2025-10-12 22:41:52] 2025-10-13 02:41:21,466 | INFO     | zombie collector waiting for pid 23440
[2025-10-12 22:41:52] 2025-10-13 02:41:21,466 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:41:52] 2025-10-13 02:41:21,467 | INFO     | collected zombie processes
[2025-10-12 22:41:52] 2025-10-13 02:41:21,467 | INFO     | will attempt to kill all subprocesses of pid=23440
[2025-10-12 22:41:52] 2025-10-13 02:41:21,554 | INFO     | process IDs to be killed: [23440] (in reverse order)
[2025-10-12 22:41:52] 2025-10-13 02:41:21,609 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:41:52] 2025-10-13 02:41:21,610 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:41:52] 2025-10-13 02:41:21,613 | INFO     | did not find any defunct processes belonging to 23440
[2025-10-12 22:41:52] 2025-10-13 02:41:21,617 | INFO     | did not find any defunct processes belonging to 23440
[2025-10-12 22:41:52] 2025-10-13 02:41:21,617 | INFO     | ready for new job
[2025-10-12 22:41:52] 2025-10-13 02:41:21,617 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:41:52] 2025-10-13 02:41:21,619 | INFO     | ***************************************
[2025-10-12 22:41:52] 2025-10-13 02:41:21,619 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:41:52] 2025-10-13 02:41:21,619 | INFO     | ***************************************
[2025-10-12 22:41:52] 2025-10-13 02:41:21,619 | INFO     | 
[2025-10-12 22:41:52] 2025-10-13 02:41:21,620 | INFO     | architecture information:
[2025-10-12 22:41:52] 2025-10-13 02:41:21,620 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:41:52] 2025-10-13 02:41:21,637 | INFO     | cat /etc/os-release:
[2025-10-12 22:41:52] NAME="CentOS Linux"
[2025-10-12 22:41:52] VERSION="7 (Core)"
[2025-10-12 22:41:52] ID="centos"
[2025-10-12 22:41:52] ID_LIKE="rhel fedora"
[2025-10-12 22:41:52] VERSION_ID="7"
[2025-10-12 22:41:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:41:52] ANSI_COLOR="0;31"
[2025-10-12 22:41:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:41:52] HOME_URL="https://www.centos.org/"
[2025-10-12 22:41:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:41:52] 
[2025-10-12 22:41:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:41:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:41:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:41:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:41:52] 
[2025-10-12 22:41:52] 2025-10-13 02:41:21,637 | INFO     | ***************************************
[2025-10-12 22:41:52] 2025-10-13 02:41:22,140 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 22:41:52] 2025-10-13 02:41:22,157 | INFO     | sufficient remaining disk space (18577620992 B)
[2025-10-12 22:41:52] 2025-10-13 02:41:22,158 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:41:52] 2025-10-13 02:41:22,158 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:41:52] 2025-10-13 02:41:22,158 | INFO     | update_server=False
[2025-10-12 22:41:52] 2025-10-13 02:41:22,158 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:41:52] 2025-10-13 02:41:22,158 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:41:52] 2025-10-13 02:41:22,159 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:41:52] 2025-10-13 02:41:22,326 | INFO     | all data control threads have been joined
[2025-10-12 22:41:52] 2025-10-13 02:41:22,356 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:41:52] 2025-10-13 02:41:22,356 | INFO     | aborting loop
[2025-10-12 22:41:52] 2025-10-13 02:41:22,763 | INFO     | all payload control threads have been joined
[2025-10-12 22:41:52] 2025-10-13 02:41:23,164 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:41:52] 2025-10-13 02:41:23,164 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:41:52] 2025-10-13 02:41:23,257 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:41:52] 2025-10-13 02:41:23,332 | INFO     | [data] control thread has finished
[2025-10-12 22:41:52] 2025-10-13 02:41:23,361 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:41:52] 2025-10-13 02:41:23,551 | INFO     | all job control threads have been joined
[2025-10-12 22:41:52] 2025-10-13 02:41:23,764 | INFO     | [job] validate thread has finished
[2025-10-12 22:41:52] 2025-10-13 02:41:23,768 | INFO     | [payload] control thread has finished
[2025-10-12 22:41:52] 2025-10-13 02:41:23,858 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:41:52] 2025-10-13 02:41:23,901 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:41:52] 2025-10-13 02:41:24,011 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:41:52] 2025-10-13 02:41:24,215 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:41:52] 2025-10-13 02:41:24,388 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:41:52] 2025-10-13 02:41:24,556 | INFO     | [job] control thread has finished
[2025-10-12 22:41:52] 2025-10-13 02:41:24,619 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:41:52] 2025-10-13 02:41:25,260 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:41:52] 2025-10-13 02:41:26,164 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:41:52] 2025-10-13 02:41:28,709 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:41:52] 2025-10-13 02:41:32,227 | INFO     | job.realtimelogging is not enabled
[2025-10-12 22:41:52] 2025-10-13 02:41:33,232 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:41:52] 2025-10-13 02:41:33,383 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139829244196672)>', '<ExcThread(monitor, started 139828322608896)>']
[2025-10-12 22:41:52] 2025-10-13 02:41:38,410 | INFO     | all workflow threads have been joined
[2025-10-12 22:41:52] 2025-10-13 02:41:38,411 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:41:52] 2025-10-13 02:41:38,411 | INFO     | traces error code: 0
[2025-10-12 22:41:52] 2025-10-13 02:41:38,412 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:41:52] 2025-10-13 02:41:52,262 | INFO     | PID=17074 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 22:41:52] 2025-10-13 02:41:52,262 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:41:52] 2025-10-13 02:41:52,262 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:41:52] 2025-10-13 02:41:52,262 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:41:52] 2025-10-13 02:41:52,262 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:41:52] 2025-10-13 02:41:52,262 | INFO     | [monitor] control thread has ended
[2025-10-12 22:41:52] 2025-10-13 02:41:52,359 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:41:52] 2025-10-13 02:41:52,363 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:41:52] 2025-10-13 02:41:52,367 [wrapper] pilotpid: 17074
[2025-10-12 22:41:52] 2025-10-13 02:41:52,371 [wrapper] Pilot exit status: 0
[2025-10-12 22:41:52] 2025-10-13 02:41:52,387 [wrapper] pandaids: 6840750288
[2025-10-12 22:41:52] 2025-10-13 02:41:52,426 [wrapper] cleanup supervisor_pilot 23055 17075
[2025-10-12 22:41:52] 2025-10-13 02:41:52,430 [wrapper] Test setup, not cleaning
[2025-10-12 22:41:52] 2025-10-13 02:41:52,435 [wrapper] apfmon messages muted
[2025-10-12 22:41:52] 2025-10-13 02:41:52,438 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:41:52] 2025-10-13 02:41:52,442 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:41:52]  *** Error codes and diagnostics ***
[2025-10-12 22:41:52]     "exeErrorCode": 0,
[2025-10-12 22:41:52]     "exeErrorDiag": "",
[2025-10-12 22:41:52]     "pilotErrorCode": 0,
[2025-10-12 22:41:52]     "pilotErrorDiag": "",
[2025-10-12 22:41:52]  *** Listing of results directory ***
[2025-10-12 22:41:52] total 417256
[2025-10-12 22:41:52] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 17:12 pilot3.tar.gz
[2025-10-12 22:41:52] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 17:17 queuedata.json
[2025-10-12 22:41:52] -rwx------ 1 boincer umatlas     36292 Oct 12 17:18 runpilot2-wrapper.sh
[2025-10-12 22:41:52] -rw-r--r-- 1 boincer umatlas       100 Oct 12 21:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:41:52] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 21:35 run_atlas
[2025-10-12 22:41:52] -rw-r--r-- 1 boincer umatlas       105 Oct 12 21:35 job.xml
[2025-10-12 22:41:52] -rw-r--r-- 2 boincer umatlas 223621129 Oct 12 21:35 EVNT.46676267._004776.pool.root.1
[2025-10-12 22:41:52] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 21:35 start_atlas.sh
[2025-10-12 22:41:52] drwxrwx--x 2 boincer umatlas      4096 Oct 12 21:35 shared
[2025-10-12 22:41:52] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 21:35 input.tar.gz
[2025-10-12 22:41:52] -rw-r--r-- 1 boincer umatlas         0 Oct 12 21:35 boinc_lockfile
[2025-10-12 22:41:52] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 21:35 pandaJob.out
[2025-10-12 22:41:52] -rw------- 1 boincer umatlas    975595 Oct 12 21:35 agis_schedconf.cvmfs.json
[2025-10-12 22:41:52] -rw------- 1 boincer umatlas   1560580 Oct 12 21:35 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:41:52] drwx------ 5 boincer umatlas      4096 Oct 12 21:35 pilot3
[2025-10-12 22:41:52] -rw-r--r-- 1 boincer umatlas      5954 Oct 12 22:39 init_data.xml
[2025-10-12 22:41:52] -rw-r--r-- 1 boincer umatlas       529 Oct 12 22:40 boinc_task_state.xml
[2025-10-12 22:41:52] -rw------- 1 boincer umatlas 197821334 Oct 12 22:40 HITS.46676269._089660.pool.root.1
[2025-10-12 22:41:52] -rw------- 1 boincer umatlas      1050 Oct 12 22:41 memory_monitor_summary.json
[2025-10-12 22:41:52] -rw------- 1 boincer umatlas        95 Oct 12 22:41 pilot_heartbeat.json
[2025-10-12 22:41:52] -rw------- 1 boincer umatlas    379670 Oct 12 22:41 log.46676269._089660.job.log.tgz.1
[2025-10-12 22:41:52] -rw------- 1 boincer umatlas      7857 Oct 12 22:41 heartbeat.json
[2025-10-12 22:41:52] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 22:41 boinc_mmap_file
[2025-10-12 22:41:52] -rw-r--r-- 1 boincer umatlas        27 Oct 12 22:41 wrapper_checkpoint.txt
[2025-10-12 22:41:52] -rw------- 1 boincer umatlas       745 Oct 12 22:41 pilotlog.txt
[2025-10-12 22:41:52] -rw------- 1 boincer umatlas    581889 Oct 12 22:41 log.46676269._089660.job.log.1
[2025-10-12 22:41:52] -rw------- 1 boincer umatlas       357 Oct 12 22:41 output.list
[2025-10-12 22:41:52] -rw-r--r-- 1 boincer umatlas       620 Oct 12 22:41 runtime_log
[2025-10-12 22:41:52] -rw------- 1 boincer umatlas    983040 Oct 12 22:41 result.tar.gz
[2025-10-12 22:41:52] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 22:41 runtime_log.err
[2025-10-12 22:41:52] -rw------- 1 boincer umatlas       659 Oct 12 22:41 fhuLDmidIS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHclNDmW4nP2m.diag
[2025-10-12 22:41:52] -rw-r--r-- 1 boincer umatlas     21825 Oct 12 22:41 stderr.txt
[2025-10-12 22:41:52] HITS file was successfully produced:
[2025-10-12 22:41:52] -rw------- 1 boincer umatlas 197821334 Oct 12 22:40 shared/HITS.pool.root.1
[2025-10-12 22:41:52]  *** Contents of shared directory: ***
[2025-10-12 22:41:52] total 413112
[2025-10-12 22:41:52] -rw-r--r-- 2 boincer umatlas 223621129 Oct 12 21:35 ATLAS.root_0
[2025-10-12 22:41:52] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 21:35 start_atlas.sh
[2025-10-12 22:41:52] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 21:35 input.tar.gz
[2025-10-12 22:41:52] -rw------- 1 boincer umatlas 197821334 Oct 12 22:40 HITS.pool.root.1
[2025-10-12 22:41:52] -rw------- 1 boincer umatlas    983040 Oct 12 22:41 result.tar.gz
22:41:54 (12952): run_atlas exited; CPU time 41819.090942
22:41:54 (12952): called boinc_finish(0)

</stderr_txt>
]]>

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