Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:31:43 (302294): wrapper (7.7.26015): starting
13:31:43 (302294): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 13:31:43] Arguments: --nthreads 3
[2025-10-13 13:31:43] Threads: 3
[2025-10-13 13:31:43] Checking for CVMFS
[2025-10-13 13:31:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 13:31:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 13:31:43] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 13:31:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 13:31:43] 2.9.2.0 3062 1006 72284 151660 0 57 27969334 36864001 0 130560 0 788079 99.990 36114 622 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 13:31:43] CVMFS is ok
[2025-10-13 13:31:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 13:31:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 13:31:43] Further information can be found at the LHC@home message board.
[2025-10-13 13:31:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 13:31:43] Checking for apptainer binary...
[2025-10-13 13:31:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 13:31:43] Running /usr/bin/apptainer --version
[2025-10-13 13:31:43] apptainer version 1.4.1-1.1
[2025-10-13 13:31:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 13:31:43] cosA125
[2025-10-13 13:31:43] apptainer works
[2025-10-13 13:31:43] Set ATHENA_PROC_NUMBER=3
[2025-10-13 13:31:43] Set ATHENA_CORE_NUMBER=3
[2025-10-13 13:31:43] Starting ATLAS job with PandaID=6840750282
[2025-10-13 13:31:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 14:58:01]  *** The last 200 lines of the pilot log: ***
[2025-10-13 14:58:01] 2025-10-13 12:57:20,662 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6840750282/log.46676269._089654.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0896
[2025-10-13 14:58:01] 2025-10-13 12:57:20,674 | INFO     | adding to output.list: log.46676269._089654.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e2/8b/log.46676269._089654.job.log.tg
[2025-10-13 14:58:01] 2025-10-13 12:57:20,674 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 14:58:01] 2025-10-13 12:57:20,674 | INFO     | summary of transferred files:
[2025-10-13 14:58:01] 2025-10-13 12:57:20,674 | INFO     |  -- lfn=log.46676269._089654.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 14:58:01] 2025-10-13 12:57:20,674 | INFO     | stage-out finished correctly
[2025-10-13 14:58:01] 2025-10-13 12:57:20,703 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 14:58:01] 2025-10-13 12:57:21,553 | INFO     | job 6840750282 has state=finished
[2025-10-13 14:58:01] 2025-10-13 12:57:21,554 | INFO     | preparing for final server update for job 6840750282 in state='finished'
[2025-10-13 14:58:01] 2025-10-13 12:57:21,554 | INFO     | this job has now completed (state=finished)
[2025-10-13 14:58:01] 2025-10-13 12:57:21,554 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 14:58:01] 2025-10-13 12:57:21,554 | INFO     | log transfer has been attempted: DONE
[2025-10-13 14:58:01] 2025-10-13 12:57:21,554 | INFO     | job 6840750282 has finished - writing final server update
[2025-10-13 14:58:01] 2025-10-13 12:57:21,555 | INFO     | total number of processed events: 400 (read)
[2025-10-13 14:58:01] 2025-10-13 12:57:21,555 | INFO     | executing command: lscpu
[2025-10-13 14:58:01] 2025-10-13 12:57:21,571 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 14:58:01] 2025-10-13 12:57:21,923 | INFO     | time since job start (5132s) is within the limit (172800.0s)
[2025-10-13 14:58:01] 2025-10-13 12:57:22,770 | WARNING  | process 312456 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 14:58:01] 2025-10-13 12:57:22,770 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6840750282/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 14:58:01] 2025-10-13 12:57:22,771 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6840750282/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 14:58:01] 2025-10-13 12:57:22,771 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-13 14:58:01] 2025-10-13 12:57:22,771 | WARNING  | maxPSS not found in memory monitor output
[2025-10-13 14:58:01] 2025-10-13 12:57:22,771 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2013607 B
[2025-10-13 14:58:01] 2025-10-13 12:57:22,771 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15554 B
[2025-10-13 14:58:01] 2025-10-13 12:57:22,771 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 14:58:01] 2025-10-13 12:57:23,929 | INFO     | time since job start (5134s) is within the limit (172800.0s)
[2025-10-13 14:58:01] 2025-10-13 12:57:25,934 | INFO     | time since job start (5136s) is within the limit (172800.0s)
[2025-10-13 14:58:01] 2025-10-13 12:57:26,686 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 14:58:01] 2025-10-13 12:57:26,690 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3977.1167499999997
[2025-10-13 14:58:01] 2025-10-13 12:57:26,692 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6840750282/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 14:58:01] 2025-10-13 12:57:26,693 | INFO     | extracted standard info from prmon json
[2025-10-13 14:58:01] 2025-10-13 12:57:26,693 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 14:58:01] 2025-10-13 12:57:26,693 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 14:58:01] 2025-10-13 12:57:26,693 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 14:58:01] 2025-10-13 12:57:26,693 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 14:58:01] 2025-10-13 12:57:26,694 | INFO     | fitting pss+swap vs Time
[2025-10-13 14:58:01] 2025-10-13 12:57:26,694 | INFO     | sum of square deviations: 141539398.0
[2025-10-13 14:58:01] 2025-10-13 12:57:26,694 | INFO     | sum of deviations: -12331133957.000002
[2025-10-13 14:58:01] 2025-10-13 12:57:26,694 | INFO     | mean x: 1760357751.0
[2025-10-13 14:58:01] 2025-10-13 12:57:26,694 | INFO     | mean y: 2488189.688311688
[2025-10-13 14:58:01] 2025-10-13 12:57:26,694 | INFO     | -- intersect: 153367611586.80954
[2025-10-13 14:58:01] 2025-10-13 12:57:26,694 | INFO     | intersect: 153367611586.80954
[2025-10-13 14:58:01] 2025-10-13 12:57:26,694 | INFO     | chi2: 0.06800227877334723
[2025-10-13 14:58:01] 2025-10-13 12:57:26,695 | INFO     | -- intersect: 153367611586.80954
[2025-10-13 14:58:01] 2025-10-13 12:57:26,695 | INFO     | current memory leak: -87.12 B/s (using 77 data points, chi2=0.07)
[2025-10-13 14:58:01] 2025-10-13 12:57:26,695 | INFO     | could have reported an average CPU frequency of 3885 MHz (6 samples)
[2025-10-13 14:58:01] 2025-10-13 12:57:26,696 | INFO     | ..............................
[2025-10-13 14:58:01] 2025-10-13 12:57:26,696 | INFO     | . Timing measurements:
[2025-10-13 14:58:01] 2025-10-13 12:57:26,696 | INFO     | . get job = 0 s
[2025-10-13 14:58:01] 2025-10-13 12:57:26,696 | INFO     | . initial setup = 1 s
[2025-10-13 14:58:01] 2025-10-13 12:57:26,696 | INFO     | . payload setup = 2 s
[2025-10-13 14:58:01] 2025-10-13 12:57:26,696 | INFO     | . stage-in = 0 s
[2025-10-13 14:58:01] 2025-10-13 12:57:26,696 | INFO     | . payload execution = 5111 s
[2025-10-13 14:58:01] 2025-10-13 12:57:26,696 | INFO     | . stage-out = 0 s
[2025-10-13 14:58:01] 2025-10-13 12:57:26,696 | INFO     | . log creation = 0 s
[2025-10-13 14:58:01] 2025-10-13 12:57:26,696 | INFO     | ..............................
[2025-10-13 14:58:01] 2025-10-13 12:57:26,711 | INFO     | sufficient remaining disk space (332323094528 B)
[2025-10-13 14:58:01] 2025-10-13 12:57:26,712 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-13 14:58:01] 2025-10-13 12:57:26,727 | INFO     | 
[2025-10-13 14:58:01] 2025-10-13 12:57:26,727 | INFO     | job summary report
[2025-10-13 14:58:01] 2025-10-13 12:57:26,727 | INFO     | --------------------------------------------------
[2025-10-13 14:58:01] 2025-10-13 12:57:26,727 | INFO     | PanDA job id: 6840750282
[2025-10-13 14:58:01] 2025-10-13 12:57:26,727 | INFO     | task id: 46676269
[2025-10-13 14:58:01] 2025-10-13 12:57:26,727 | INFO     | errors: (none)
[2025-10-13 14:58:01] 2025-10-13 12:57:26,727 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 14:58:01] 2025-10-13 12:57:26,727 | INFO     | pilot state: finished 
[2025-10-13 14:58:01] 2025-10-13 12:57:26,727 | INFO     | transexitcode: 0
[2025-10-13 14:58:01] 2025-10-13 12:57:26,728 | INFO     | exeerrorcode: 0
[2025-10-13 14:58:01] 2025-10-13 12:57:26,728 | INFO     | exeerrordiag: 
[2025-10-13 14:58:01] 2025-10-13 12:57:26,728 | INFO     | exitcode: 0
[2025-10-13 14:58:01] 2025-10-13 12:57:26,728 | INFO     | exitmsg: OK
[2025-10-13 14:58:01] 2025-10-13 12:57:26,728 | INFO     | cpuconsumptiontime: 14736 s
[2025-10-13 14:58:01] 2025-10-13 12:57:26,728 | INFO     | nevents: 400
[2025-10-13 14:58:01] 2025-10-13 12:57:26,728 | INFO     | neventsw: 0
[2025-10-13 14:58:01] 2025-10-13 12:57:26,728 | INFO     | pid: 312456
[2025-10-13 14:58:01] 2025-10-13 12:57:26,728 | INFO     | pgrp: 312456
[2025-10-13 14:58:01] 2025-10-13 12:57:26,728 | INFO     | corecount: 3
[2025-10-13 14:58:01] 2025-10-13 12:57:26,728 | INFO     | event service: False
[2025-10-13 14:58:01] 2025-10-13 12:57:26,728 | INFO     | sizes: {0: 2348860, 2: 2349122, 11: 2349150, 5118: 2384626, 5124: 2384764}
[2025-10-13 14:58:01] 2025-10-13 12:57:26,728 | INFO     | --------------------------------------------------
[2025-10-13 14:58:01] 2025-10-13 12:57:26,728 | INFO     | 
[2025-10-13 14:58:01] 2025-10-13 12:57:26,728 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-13 14:58:01] 2025-10-13 12:57:26,730 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6840750282: 2313746 B (within 2537553920 B limit)
[2025-10-13 14:58:01] 2025-10-13 12:57:26,731 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6840750282/HITS.46676269._089654.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-13 14:58:01] 2025-10-13 12:57:26,731 | INFO     | total size of present files: 0 B (workdir size: 2313746 B)
[2025-10-13 14:58:01] 2025-10-13 12:57:26,731 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6840750282/HITS.46676269._089654.pool.root.1 since it does not exist
[2025-10-13 14:58:01] 2025-10-13 12:57:26,740 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 14:58:01] 2025-10-13 12:57:26,740 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 14:58:01] 2025-10-13 12:57:26,740 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 14:58:01] 2025-10-13 12:57:26,740 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 14:58:01] 2025-10-13 12:57:26,740 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 14:58:01] 2025-10-13 12:57:26,740 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 14:58:01] 2025-10-13 12:57:26,740 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 14:58:01] 2025-10-13 12:57:26,740 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 14:58:01] 2025-10-13 12:57:26,740 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 14:58:01] 2025-10-13 12:57:26,740 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 14:58:01] 2025-10-13 12:57:26,740 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 14:58:01] 2025-10-13 12:57:26,740 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 14:58:01] 2025-10-13 12:57:26,740 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 14:58:01] 2025-10-13 12:57:26,740 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 14:58:01] 2025-10-13 12:57:26,740 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 14:58:01] 2025-10-13 12:57:26,740 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 14:58:01] 2025-10-13 12:57:26,740 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 14:58:01] 2025-10-13 12:57:26,740 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 14:58:01] 2025-10-13 12:57:26,740 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 14:58:01] 2025-10-13 12:57:26,740 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 14:58:01] 2025-10-13 12:57:26,740 | INFO     | job 6840750282 has completed (purged errors)
[2025-10-13 14:58:01] 2025-10-13 12:57:26,740 | INFO     | overall cleanup function is called
[2025-10-13 14:58:01] 2025-10-13 12:57:26,780 | INFO     | number of running child processes to parent process 312456: 1
[2025-10-13 14:58:01] 2025-10-13 12:57:26,780 | INFO     | maximum number of monitored processes: 6
[2025-10-13 14:58:01] 2025-10-13 12:57:26,780 | INFO     | aborting job monitoring since job object (job id=6840750282) has expired
[2025-10-13 14:58:01] 2025-10-13 12:57:27,747 | INFO     | --- collectZombieJob: --- 10, [312456]
[2025-10-13 14:58:01] 2025-10-13 12:57:27,747 | INFO     | zombie collector waiting for pid 312456
[2025-10-13 14:58:01] 2025-10-13 12:57:27,747 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 14:58:01] 2025-10-13 12:57:27,747 | INFO     | collected zombie processes
[2025-10-13 14:58:01] 2025-10-13 12:57:27,747 | INFO     | will attempt to kill all subprocesses of pid=312456
[2025-10-13 14:58:01] 2025-10-13 12:57:27,795 | INFO     | process IDs to be killed: [312456] (in reverse order)
[2025-10-13 14:58:01] 2025-10-13 12:57:27,820 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 14:58:01] 2025-10-13 12:57:27,820 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 14:58:01] 2025-10-13 12:57:27,822 | INFO     | did not find any defunct processes belonging to 312456
[2025-10-13 14:58:01] 2025-10-13 12:57:27,823 | INFO     | did not find any defunct processes belonging to 312456
[2025-10-13 14:58:01] 2025-10-13 12:57:27,823 | INFO     | ready for new job
[2025-10-13 14:58:01] 2025-10-13 12:57:27,823 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 14:58:01] 2025-10-13 12:57:27,824 | INFO     | ***************************************
[2025-10-13 14:58:01] 2025-10-13 12:57:27,824 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 14:58:01] 2025-10-13 12:57:27,824 | INFO     | ***************************************
[2025-10-13 14:58:01] 2025-10-13 12:57:27,824 | INFO     | 
[2025-10-13 14:58:01] 2025-10-13 12:57:27,824 | INFO     | architecture information:
[2025-10-13 14:58:01] 2025-10-13 12:57:27,824 | INFO     | executing command: cat /etc/os-release
[2025-10-13 14:58:01] 2025-10-13 12:57:27,833 | INFO     | cat /etc/os-release:
[2025-10-13 14:58:01] NAME="CentOS Linux"
[2025-10-13 14:58:01] VERSION="7 (Core)"
[2025-10-13 14:58:01] ID="centos"
[2025-10-13 14:58:01] ID_LIKE="rhel fedora"
[2025-10-13 14:58:01] VERSION_ID="7"
[2025-10-13 14:58:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 14:58:01] ANSI_COLOR="0;31"
[2025-10-13 14:58:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 14:58:01] HOME_URL="https://www.centos.org/"
[2025-10-13 14:58:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 14:58:01] 
[2025-10-13 14:58:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 14:58:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 14:58:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 14:58:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 14:58:01] 
[2025-10-13 14:58:01] 2025-10-13 12:57:27,833 | INFO     | ***************************************
[2025-10-13 14:58:01] 2025-10-13 12:57:28,336 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 14:58:01] 2025-10-13 12:57:28,349 | INFO     | sufficient remaining disk space (332326240256 B)
[2025-10-13 14:58:01] 2025-10-13 12:57:28,349 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 14:58:01] 2025-10-13 12:57:28,349 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 14:58:01] 2025-10-13 12:57:28,349 | INFO     | update_server=False
[2025-10-13 14:58:01] 2025-10-13 12:57:28,349 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 14:58:01] 2025-10-13 12:57:28,349 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 14:58:01] 2025-10-13 12:57:28,349 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 14:58:01] 2025-10-13 12:57:28,349 | INFO     | aborting loop
[2025-10-13 14:58:01] 2025-10-13 12:57:28,579 | INFO     | all job control threads have been joined
[2025-10-13 14:58:01] 2025-10-13 12:57:28,715 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 14:58:01] 2025-10-13 12:57:28,741 | INFO     | all data control threads have been joined
[2025-10-13 14:58:01] 2025-10-13 12:57:29,351 | INFO     | [job] queue monitor thread has finished
[2025-10-13 14:58:01] 2025-10-13 12:57:29,354 | INFO     | [job] job monitor thread has finished
[2025-10-13 14:58:01] 2025-10-13 12:57:29,354 | INFO     | [job] retrieve thread has finished
[2025-10-13 14:58:01] 2025-10-13 12:57:29,584 | INFO     | [job] control thread has finished
[2025-10-13 14:58:01] 2025-10-13 12:57:29,706 | INFO     | [data] copytool_in thread has finished
[2025-10-13 14:58:01] 2025-10-13 12:57:29,739 | INFO     | all payload control threads have been joined
[2025-10-13 14:58:01] 2025-10-13 12:57:29,747 | INFO     | [data] control thread has finished
[2025-10-13 14:58:01] 2025-10-13 12:57:30,129 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 14:58:01] 2025-10-13 12:57:30,189 | INFO     | [job] validate thread has finished
[2025-10-13 14:58:01] 2025-10-13 12:57:30,246 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 14:58:01] 2025-10-13 12:57:30,271 | INFO     | [payload] failed_post thread has finished
[2025-10-13 14:58:01] 2025-10-13 12:57:30,325 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 14:58:01] 2025-10-13 12:57:30,721 | INFO     | [data] copytool_out thread has finished
[2025-10-13 14:58:01] 2025-10-13 12:57:30,744 | INFO     | [payload] control thread has finished
[2025-10-13 14:58:01] 2025-10-13 12:57:30,809 | INFO     | [payload] validate_post thread has finished
[2025-10-13 14:58:01] 2025-10-13 12:57:31,239 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 14:58:01] 2025-10-13 12:57:35,246 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 14:58:01] 2025-10-13 12:57:38,516 | INFO     | job.realtimelogging is not enabled
[2025-10-13 14:58:01] 2025-10-13 12:57:39,521 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 14:58:01] 2025-10-13 12:57:54,173 | INFO     | [monitor] cgroup control has ended
[2025-10-13 14:58:01] 2025-10-13 12:57:56,169 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140107105236800)>', '<ExcThread(monitor, started 140106379810560)>']
[2025-10-13 14:58:01] 2025-10-13 12:57:59,044 | INFO     | PID=306017 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 14:58:01] 2025-10-13 12:57:59,044 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 14:58:01] 2025-10-13 12:57:59,044 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 14:58:01] 2025-10-13 12:57:59,044 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 14:58:01] 2025-10-13 12:57:59,044 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 14:58:01] 2025-10-13 12:57:59,044 | INFO     | [monitor] control thread has ended
[2025-10-13 14:58:01] 2025-10-13 12:58:01,178 | INFO     | all workflow threads have been joined
[2025-10-13 14:58:01] 2025-10-13 12:58:01,178 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 14:58:01] 2025-10-13 12:58:01,179 | INFO     | traces error code: 0
[2025-10-13 14:58:01] 2025-10-13 12:58:01,179 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 14:58:01] 2025-10-13 12:58:01,227 [wrapper] ==== pilot stdout END ====
[2025-10-13 14:58:01] 2025-10-13 12:58:01,230 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 14:58:01] 2025-10-13 12:58:01,232 [wrapper] pilotpid: 306017
[2025-10-13 14:58:01] 2025-10-13 12:58:01,235 [wrapper] Pilot exit status: 0
[2025-10-13 14:58:01] 2025-10-13 12:58:01,241 [wrapper] pandaids: 6840750282
[2025-10-13 14:58:01] 2025-10-13 12:58:01,259 [wrapper] cleanup supervisor_pilot  324776 306018
[2025-10-13 14:58:01] 2025-10-13 12:58:01,261 [wrapper] Test setup, not cleaning
[2025-10-13 14:58:01] 2025-10-13 12:58:01,264 [wrapper] apfmon messages muted
[2025-10-13 14:58:01] 2025-10-13 12:58:01,266 [wrapper] ==== wrapper stdout END ====
[2025-10-13 14:58:01] 2025-10-13 12:58:01,268 [wrapper] ==== wrapper stderr END ====
[2025-10-13 14:58:01]  *** Error codes and diagnostics ***
[2025-10-13 14:58:01]     "exeErrorCode": 0,
[2025-10-13 14:58:01]     "exeErrorDiag": "",
[2025-10-13 14:58:01]     "pilotErrorCode": 0,
[2025-10-13 14:58:01]     "pilotErrorDiag": "",
[2025-10-13 14:58:01]  *** Listing of results directory ***
[2025-10-13 14:58:01] total 415648
[2025-10-13 14:58:01] -rw-r--r-- 1 boinc boinc    557409 Oct 12 23:12 pilot3.tar.gz
[2025-10-13 14:58:01] -rw-r--r-- 1 boinc boinc      5112 Oct 12 23:17 queuedata.json
[2025-10-13 14:58:01] -rwx------ 1 boinc boinc     36292 Oct 12 23:17 runpilot2-wrapper.sh
[2025-10-13 14:58:01] -rw-r--r-- 1 boinc boinc       100 Oct 13 13:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 14:58:01] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 13:31 run_atlas
[2025-10-13 14:58:01] -rw-r--r-- 1 boinc boinc       105 Oct 13 13:31 job.xml
[2025-10-13 14:58:01] -rw-r--r-- 2 boinc boinc 223621129 Oct 13 13:31 EVNT.46676267._004776.pool.root.1
[2025-10-13 14:58:01] -rw-r--r-- 2 boinc boinc    569677 Oct 13 13:31 input.tar.gz
[2025-10-13 14:58:01] -rw-r--r-- 2 boinc boinc     15120 Oct 13 13:31 start_atlas.sh
[2025-10-13 14:58:01] drwxrwx--x 2 boinc boinc      4096 Oct 13 13:31 shared
[2025-10-13 14:58:01] -rw-r--r-- 1 boinc boinc         0 Oct 13 13:31 boinc_setup_complete
[2025-10-13 14:58:01] -rw-r--r-- 1 boinc boinc      6438 Oct 13 13:31 init_data.xml
[2025-10-13 14:58:01] -rw-r--r-- 1 boinc boinc         0 Oct 13 13:31 boinc_lockfile
[2025-10-13 14:58:01] -rw-r--r-- 1 boinc boinc      2550 Oct 13 13:31 pandaJob.out
[2025-10-13 14:58:01] -rw------- 1 boinc boinc    972497 Oct 13 13:31 agis_schedconf.cvmfs.json
[2025-10-13 14:58:01] -rw------- 1 boinc boinc   1560580 Oct 13 13:31 agis_ddmendpoints.agis.ALL.json
[2025-10-13 14:58:01] drwx------ 5 boinc boinc      4096 Oct 13 13:31 pilot3
[2025-10-13 14:58:01] -rw------- 1 boinc boinc 196087969 Oct 13 14:57 HITS.46676269._089654.pool.root.1
[2025-10-13 14:58:01] -rw-r--r-- 1 boinc boinc       529 Oct 13 14:57 boinc_task_state.xml
[2025-10-13 14:58:01] -rw------- 1 boinc boinc        95 Oct 13 14:57 pilot_heartbeat.json
[2025-10-13 14:58:01] -rw------- 1 boinc boinc      1039 Oct 13 14:57 memory_monitor_summary.json
[2025-10-13 14:58:01] -rw------- 1 boinc boinc    250318 Oct 13 14:57 log.46676269._089654.job.log.tgz.1
[2025-10-13 14:58:01] -rw------- 1 boinc boinc      7772 Oct 13 14:57 heartbeat.json
[2025-10-13 14:58:01] -rw-r--r-- 1 boinc boinc        27 Oct 13 14:57 wrapper_checkpoint.txt
[2025-10-13 14:58:01] -rw-r--r-- 1 boinc boinc      8192 Oct 13 14:57 boinc_mmap_file
[2025-10-13 14:58:01] -rw------- 1 boinc boinc      4823 Oct 13 14:58 pilotlog.txt
[2025-10-13 14:58:01] -rw------- 1 boinc boinc    752703 Oct 13 14:58 log.46676269._089654.job.log.1
[2025-10-13 14:58:01] -rw------- 1 boinc boinc       357 Oct 13 14:58 output.list
[2025-10-13 14:58:01] -rw-r--r-- 1 boinc boinc       620 Oct 13 14:58 runtime_log
[2025-10-13 14:58:01] -rw------- 1 boinc boinc   1024000 Oct 13 14:58 result.tar.gz
[2025-10-13 14:58:01] -rw-r--r-- 1 boinc boinc      8782 Oct 13 14:58 runtime_log.err
[2025-10-13 14:58:01] -rw------- 1 boinc boinc       659 Oct 13 14:58 geSMDmocIS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBclNDmYaNRmn.diag
[2025-10-13 14:58:01] -rw-r--r-- 1 boinc boinc     22586 Oct 13 14:58 stderr.txt
[2025-10-13 14:58:01] HITS file was successfully produced:
[2025-10-13 14:58:01] -rw------- 1 boinc boinc 196087969 Oct 13 14:57 shared/HITS.pool.root.1
[2025-10-13 14:58:01]  *** Contents of shared directory: ***
[2025-10-13 14:58:01] total 411464
[2025-10-13 14:58:01] -rw-r--r-- 2 boinc boinc 223621129 Oct 13 13:31 ATLAS.root_0
[2025-10-13 14:58:01] -rw-r--r-- 2 boinc boinc    569677 Oct 13 13:31 input.tar.gz
[2025-10-13 14:58:01] -rw-r--r-- 2 boinc boinc     15120 Oct 13 13:31 start_atlas.sh
[2025-10-13 14:58:01] -rw------- 1 boinc boinc 196087969 Oct 13 14:57 HITS.pool.root.1
[2025-10-13 14:58:01] -rw------- 1 boinc boinc   1024000 Oct 13 14:58 result.tar.gz
14:58:02 (302294): run_atlas exited; CPU time 14760.881976
14:58:02 (302294): called boinc_finish(0)

</stderr_txt>
]]>

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