Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:27:55 (8689): wrapper (7.7.26015): starting
21:27:55 (8689): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 21:27:55] Arguments: --nthreads 12
[2025-10-12 21:27:55] Threads: 12
[2025-10-12 21:27:55] Checking for CVMFS
[2025-10-12 21:27:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 21:27:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 21:27:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 21:27:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 21:27:55] 2.11.2.0 2945 223661 100200 151643 0 57 16248103 20275201 1 130560 2 110539824 99.984 13443927 12792 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 21:27:55] CVMFS is ok
[2025-10-12 21:27:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 21:27:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 21:27:55] Further information can be found at the LHC@home message board.
[2025-10-12 21:27:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:27:55] Checking for apptainer binary...
[2025-10-12 21:27:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 21:27:55] Running /usr/bin/apptainer --version
[2025-10-12 21:27:55] apptainer version 1.3.2-1.el7
[2025-10-12 21:27:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:27:57] c-205-2.aglt2.org
[2025-10-12 21:27:57] apptainer works
[2025-10-12 21:27:57] Set ATHENA_PROC_NUMBER=12
[2025-10-12 21:27:57] Set ATHENA_CORE_NUMBER=12
[2025-10-12 21:27:57] Starting ATLAS job with PandaID=6840750358
[2025-10-12 21:27:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:42:25]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:42:25]  scope=mc23_13p6TeV
[2025-10-12 22:42:25]  status=None
[2025-10-12 22:42:25]  status_code=0
[2025-10-12 22:42:25]  storage_token=
[2025-10-12 22:42:25]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840750358/log.46676269._089730.job.log.tgz.1
[2025-10-12 22:42:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/26/6a/log.46676269._089730.job.log.tgz.1
[2025-10-12 22:42:25]  workdir=None
[2025-10-12 22:42:25] ]
[2025-10-12 22:42:25] 2025-10-13 02:41:35,425 | INFO     | transferring file log.46676269._089730.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840750358/log.46676269._089730.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 22:42:25] 2025-10-13 02:41:35,425 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840750358/log.46676269._089730.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._089730.job
[2025-10-12 22:42:25] 2025-10-13 02:41:35,448 | INFO     | adding to output.list: log.46676269._089730.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/26/6a/log.46676269._089730.job.log.tg
[2025-10-12 22:42:25] 2025-10-13 02:41:35,449 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 22:42:25] 2025-10-13 02:41:35,449 | INFO     | summary of transferred files:
[2025-10-12 22:42:25] 2025-10-13 02:41:35,450 | INFO     |  -- lfn=log.46676269._089730.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 22:42:25] 2025-10-13 02:41:35,450 | INFO     | stage-out finished correctly
[2025-10-12 22:42:25] 2025-10-13 02:41:35,760 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 22:42:25] 2025-10-13 02:41:36,779 | INFO     | time since job start (4404s) is within the limit (172800.0s)
[2025-10-12 22:42:25] 2025-10-13 02:41:38,433 | INFO     | job 6840750358 has state=finished
[2025-10-12 22:42:25] 2025-10-13 02:41:38,433 | INFO     | preparing for final server update for job 6840750358 in state='finished'
[2025-10-12 22:42:25] 2025-10-13 02:41:38,512 | WARNING  | process 18752 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 22:42:25] 2025-10-13 02:41:38,512 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840750358/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 22:42:25] 2025-10-13 02:41:38,528 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-12 22:42:25] 2025-10-13 02:41:38,528 | INFO     | this job has now completed (state=finished)
[2025-10-12 22:42:25] 2025-10-13 02:41:38,528 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 22:42:25] 2025-10-13 02:41:38,528 | INFO     | log transfer has been attempted: DONE
[2025-10-12 22:42:25] 2025-10-13 02:41:38,529 | INFO     | job 6840750358 has finished - writing final server update
[2025-10-12 22:42:25] 2025-10-13 02:41:38,529 | INFO     | total number of processed events: 400 (read)
[2025-10-12 22:42:25] 2025-10-13 02:41:38,530 | INFO     | executing command: lscpu
[2025-10-12 22:42:25] 2025-10-13 02:41:38,554 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 22:42:25] 2025-10-13 02:41:38,617 | INFO     | number of running child processes to parent process 18752: 1
[2025-10-12 22:42:25] 2025-10-13 02:41:38,618 | INFO     | maximum number of monitored processes: 6
[2025-10-12 22:42:25] 2025-10-13 02:41:38,790 | INFO     | time since job start (4406s) is within the limit (172800.0s)
[2025-10-12 22:42:25] 2025-10-13 02:41:40,796 | INFO     | time since job start (4408s) is within the limit (172800.0s)
[2025-10-12 22:42:25] 2025-10-13 02:41:41,121 | INFO     | monitor loop #329: job 0:6840750358 is in state 'finished'
[2025-10-12 22:42:25] 2025-10-13 02:41:41,121 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:42:25] 2025-10-13 02:41:42,801 | INFO     | time since job start (4410s) is within the limit (172800.0s)
[2025-10-12 22:42:25] 2025-10-13 02:41:43,210 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 22:42:25] 2025-10-13 02:41:43,214 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1762.3333333333333
[2025-10-12 22:42:25] 2025-10-13 02:41:43,217 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840750358/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 22:42:25] 2025-10-13 02:41:43,217 | INFO     | extracted standard info from prmon json
[2025-10-12 22:42:25] 2025-10-13 02:41:43,218 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 22:42:25] 2025-10-13 02:41:43,218 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 22:42:25] 2025-10-13 02:41:43,218 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 22:42:25] 2025-10-13 02:41:43,218 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:42:25] 2025-10-13 02:41:43,220 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:42:25] 2025-10-13 02:41:43,220 | INFO     | sum of square deviations: 85136480.0
[2025-10-12 22:42:25] 2025-10-13 02:41:43,221 | INFO     | sum of deviations: -5407539346.0
[2025-10-12 22:42:25] 2025-10-13 02:41:43,221 | INFO     | mean x: 1760321178.0
[2025-10-12 22:42:25] 2025-10-13 02:41:43,221 | INFO     | mean y: 2781739.230769231
[2025-10-12 22:42:25] 2025-10-13 02:41:43,221 | INFO     | -- intersect: 111811562553.66037
[2025-10-12 22:42:25] 2025-10-13 02:41:43,221 | INFO     | intersect: 111811562553.66037
[2025-10-12 22:42:25] 2025-10-13 02:41:43,222 | INFO     | chi2: 0.15333153190875634
[2025-10-12 22:42:25] 2025-10-13 02:41:43,222 | INFO     | -- intersect: 111811562553.66037
[2025-10-12 22:42:25] 2025-10-13 02:41:43,222 | INFO     | current memory leak: -63.52 B/s (using 65 data points, chi2=0.15)
[2025-10-12 22:42:25] 2025-10-13 02:41:43,222 | INFO     | could have reported an average CPU frequency of 2061 MHz (6 samples)
[2025-10-12 22:42:25] 2025-10-13 02:41:43,222 | INFO     | ..............................
[2025-10-12 22:42:25] 2025-10-13 02:41:43,222 | INFO     | . Timing measurements:
[2025-10-12 22:42:25] 2025-10-13 02:41:43,223 | INFO     | . get job = 0 s
[2025-10-12 22:42:25] 2025-10-13 02:41:43,223 | INFO     | . initial setup = 2 s
[2025-10-12 22:42:25] 2025-10-13 02:41:43,223 | INFO     | . payload setup = 7 s
[2025-10-12 22:42:25] 2025-10-13 02:41:43,223 | INFO     | . stage-in = 0 s
[2025-10-12 22:42:25] 2025-10-13 02:41:43,223 | INFO     | . payload execution = 4375 s
[2025-10-12 22:42:25] 2025-10-13 02:41:43,223 | INFO     | . stage-out = 0 s
[2025-10-12 22:42:25] 2025-10-13 02:41:43,223 | INFO     | . log creation = 0 s
[2025-10-12 22:42:25] 2025-10-13 02:41:43,223 | INFO     | ..............................
[2025-10-12 22:42:25] 2025-10-13 02:41:43,306 | INFO     | 
[2025-10-12 22:42:25] 2025-10-13 02:41:43,306 | INFO     | job summary report
[2025-10-12 22:42:25] 2025-10-13 02:41:43,306 | INFO     | --------------------------------------------------
[2025-10-12 22:42:25] 2025-10-13 02:41:43,306 | INFO     | PanDA job id: 6840750358
[2025-10-12 22:42:25] 2025-10-13 02:41:43,306 | INFO     | task id: 46676269
[2025-10-12 22:42:25] 2025-10-13 02:41:43,307 | INFO     | errors: (none)
[2025-10-12 22:42:25] 2025-10-13 02:41:43,307 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:42:25] 2025-10-13 02:41:43,307 | INFO     | pilot state: finished 
[2025-10-12 22:42:25] 2025-10-13 02:41:43,307 | INFO     | transexitcode: 0
[2025-10-12 22:42:25] 2025-10-13 02:41:43,307 | INFO     | exeerrorcode: 0
[2025-10-12 22:42:25] 2025-10-13 02:41:43,307 | INFO     | exeerrordiag: 
[2025-10-12 22:42:25] 2025-10-13 02:41:43,308 | INFO     | exitcode: 0
[2025-10-12 22:42:25] 2025-10-13 02:41:43,308 | INFO     | exitmsg: OK
[2025-10-12 22:42:25] 2025-10-13 02:41:43,308 | INFO     | cpuconsumptiontime: 44742 s
[2025-10-12 22:42:25] 2025-10-13 02:41:43,308 | INFO     | nevents: 400
[2025-10-12 22:42:25] 2025-10-13 02:41:43,308 | INFO     | neventsw: 0
[2025-10-12 22:42:25] 2025-10-13 02:41:43,308 | INFO     | pid: 18752
[2025-10-12 22:42:25] 2025-10-13 02:41:43,308 | INFO     | pgrp: 18752
[2025-10-12 22:42:25] 2025-10-13 02:41:43,309 | INFO     | corecount: 12
[2025-10-12 22:42:25] 2025-10-13 02:41:43,309 | INFO     | event service: False
[2025-10-12 22:42:25] 2025-10-13 02:41:43,309 | INFO     | sizes: {0: 2348029, 1: 2348885, 6: 2349147, 12: 2349175, 4386: 2375251, 4387: 2384433, 4394: 2384571}
[2025-10-12 22:42:25] 2025-10-13 02:41:43,309 | INFO     | --------------------------------------------------
[2025-10-12 22:42:25] 2025-10-13 02:41:43,309 | INFO     | 
[2025-10-12 22:42:25] 2025-10-13 02:41:43,309 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 22:42:25] 2025-10-13 02:41:43,334 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:42:25] 2025-10-13 02:41:43,334 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:42:25] 2025-10-13 02:41:43,334 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:42:25] 2025-10-13 02:41:43,334 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:42:25] 2025-10-13 02:41:43,335 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:42:25] 2025-10-13 02:41:43,335 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:42:25] 2025-10-13 02:41:43,335 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:42:25] 2025-10-13 02:41:43,335 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:42:25] 2025-10-13 02:41:43,335 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:42:25] 2025-10-13 02:41:43,335 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:42:25] 2025-10-13 02:41:43,336 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:42:25] 2025-10-13 02:41:43,336 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:42:25] 2025-10-13 02:41:43,336 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:42:25] 2025-10-13 02:41:43,336 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:42:25] 2025-10-13 02:41:43,336 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:42:25] 2025-10-13 02:41:43,337 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:42:25] 2025-10-13 02:41:43,337 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:42:25] 2025-10-13 02:41:43,337 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:42:25] 2025-10-13 02:41:43,337 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:42:25] 2025-10-13 02:41:43,337 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:42:25] 2025-10-13 02:41:43,337 | INFO     | job 6840750358 has completed (purged errors)
[2025-10-12 22:42:25] 2025-10-13 02:41:43,338 | INFO     | overall cleanup function is called
[2025-10-12 22:42:25] 2025-10-13 02:41:44,346 | INFO     | --- collectZombieJob: --- 10, [18752]
[2025-10-12 22:42:25] 2025-10-13 02:41:44,346 | INFO     | zombie collector waiting for pid 18752
[2025-10-12 22:42:25] 2025-10-13 02:41:44,346 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:42:25] 2025-10-13 02:41:44,346 | INFO     | collected zombie processes
[2025-10-12 22:42:25] 2025-10-13 02:41:44,346 | INFO     | will attempt to kill all subprocesses of pid=18752
[2025-10-12 22:42:25] 2025-10-13 02:41:44,439 | INFO     | process IDs to be killed: [18752] (in reverse order)
[2025-10-12 22:42:25] 2025-10-13 02:41:44,484 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:42:25] 2025-10-13 02:41:44,485 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:42:25] 2025-10-13 02:41:44,487 | INFO     | did not find any defunct processes belonging to 18752
[2025-10-12 22:42:25] 2025-10-13 02:41:44,489 | INFO     | did not find any defunct processes belonging to 18752
[2025-10-12 22:42:25] 2025-10-13 02:41:44,489 | INFO     | ready for new job
[2025-10-12 22:42:25] 2025-10-13 02:41:44,489 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:42:25] 2025-10-13 02:41:44,490 | INFO     | ***************************************
[2025-10-12 22:42:25] 2025-10-13 02:41:44,491 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:42:25] 2025-10-13 02:41:44,491 | INFO     | ***************************************
[2025-10-12 22:42:25] 2025-10-13 02:41:44,491 | INFO     | 
[2025-10-12 22:42:25] 2025-10-13 02:41:44,491 | INFO     | architecture information:
[2025-10-12 22:42:25] 2025-10-13 02:41:44,492 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:42:25] 2025-10-13 02:41:44,506 | INFO     | cat /etc/os-release:
[2025-10-12 22:42:25] NAME="CentOS Linux"
[2025-10-12 22:42:25] VERSION="7 (Core)"
[2025-10-12 22:42:25] ID="centos"
[2025-10-12 22:42:25] ID_LIKE="rhel fedora"
[2025-10-12 22:42:25] VERSION_ID="7"
[2025-10-12 22:42:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:42:25] ANSI_COLOR="0;31"
[2025-10-12 22:42:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:42:25] HOME_URL="https://www.centos.org/"
[2025-10-12 22:42:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:42:25] 
[2025-10-12 22:42:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:42:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:42:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:42:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:42:25] 
[2025-10-12 22:42:25] 2025-10-13 02:41:44,506 | INFO     | ***************************************
[2025-10-12 22:42:25] 2025-10-13 02:41:45,009 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 22:42:25] 2025-10-13 02:41:45,028 | INFO     | sufficient remaining disk space (29436674048 B)
[2025-10-12 22:42:25] 2025-10-13 02:41:45,028 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:42:25] 2025-10-13 02:41:45,029 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:42:25] 2025-10-13 02:41:45,029 | INFO     | update_server=False
[2025-10-12 22:42:25] 2025-10-13 02:41:45,029 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:42:25] 2025-10-13 02:41:45,029 | INFO     | all data control threads have been joined
[2025-10-12 22:42:25] 2025-10-13 02:41:45,030 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:42:25] 2025-10-13 02:41:45,030 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:42:25] 2025-10-13 02:41:45,030 | INFO     | aborting loop
[2025-10-12 22:42:25] 2025-10-13 02:41:45,123 | INFO     | all job control threads have been joined
[2025-10-12 22:42:25] 2025-10-13 02:41:45,634 | INFO     | all payload control threads have been joined
[2025-10-12 22:42:25] 2025-10-13 02:41:46,033 | INFO     | [data] control thread has finished
[2025-10-12 22:42:25] 2025-10-13 02:41:46,034 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:42:25] 2025-10-13 02:41:46,035 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:42:25] 2025-10-13 02:41:46,036 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:42:25] 2025-10-13 02:41:46,049 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:42:25] 2025-10-13 02:41:46,109 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:42:25] 2025-10-13 02:41:46,125 | INFO     | [job] control thread has finished
[2025-10-12 22:42:25] 2025-10-13 02:41:46,184 | INFO     | [job] validate thread has finished
[2025-10-12 22:42:25] 2025-10-13 02:41:46,207 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:42:25] 2025-10-13 02:41:46,351 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:42:25] 2025-10-13 02:41:46,424 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:42:25] 2025-10-13 02:41:46,595 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:42:25] 2025-10-13 02:41:46,639 | INFO     | [payload] control thread has finished
[2025-10-12 22:42:25] 2025-10-13 02:41:46,889 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:42:25] 2025-10-13 02:41:47,416 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:42:25] 2025-10-13 02:41:48,050 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:42:25] 2025-10-13 02:41:50,357 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:42:25] 2025-10-13 02:41:55,299 | INFO     | job.realtimelogging is not enabled
[2025-10-12 22:42:25] 2025-10-13 02:41:56,304 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:42:25] 2025-10-13 02:42:16,006 | INFO     | PID=12402 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 22:42:25] 2025-10-13 02:42:16,007 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:42:25] 2025-10-13 02:42:16,007 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:42:25] 2025-10-13 02:42:16,007 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:42:25] 2025-10-13 02:42:18,401 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:42:25] 2025-10-13 02:42:20,403 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139655124735808)>', '<ExcThread(monitor, started 139654384826112)>']
[2025-10-12 22:42:25] 2025-10-13 02:42:21,033 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:42:25] 2025-10-13 02:42:21,033 | INFO     | [monitor] control thread has ended
[2025-10-12 22:42:25] 2025-10-13 02:42:25,429 | INFO     | all workflow threads have been joined
[2025-10-12 22:42:25] 2025-10-13 02:42:25,429 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:42:25] 2025-10-13 02:42:25,429 | INFO     | traces error code: 0
[2025-10-12 22:42:25] 2025-10-13 02:42:25,430 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:42:25] 2025-10-13 02:42:25,514 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:42:25] 2025-10-13 02:42:25,518 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:42:25] 2025-10-13 02:42:25,522 [wrapper] pilotpid: 12402
[2025-10-12 22:42:25] 2025-10-13 02:42:25,525 [wrapper] Pilot exit status: 0
[2025-10-12 22:42:25] 2025-10-13 02:42:25,540 [wrapper] pandaids: 6840750358
[2025-10-12 22:42:25] 2025-10-13 02:42:25,583 [wrapper] cleanup supervisor_pilot 29017 12403
[2025-10-12 22:42:25] 2025-10-13 02:42:25,587 [wrapper] Test setup, not cleaning
[2025-10-12 22:42:25] 2025-10-13 02:42:25,591 [wrapper] apfmon messages muted
[2025-10-12 22:42:25] 2025-10-13 02:42:25,595 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:42:25] 2025-10-13 02:42:25,599 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:42:25]  *** Error codes and diagnostics ***
[2025-10-12 22:42:25]     "exeErrorCode": 0,
[2025-10-12 22:42:25]     "exeErrorDiag": "",
[2025-10-12 22:42:25]     "pilotErrorCode": 0,
[2025-10-12 22:42:25]     "pilotErrorDiag": "",
[2025-10-12 22:42:25]  *** Listing of results directory ***
[2025-10-12 22:42:25] total 409120
[2025-10-12 22:42:25] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 17:12 pilot3.tar.gz
[2025-10-12 22:42:25] -rwx------ 1 boincer umatlas     36292 Oct 12 17:17 runpilot2-wrapper.sh
[2025-10-12 22:42:25] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 17:17 queuedata.json
[2025-10-12 22:42:25] -rw-r--r-- 1 boincer umatlas       100 Oct 12 21:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:42:25] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 21:27 run_atlas
[2025-10-12 22:42:25] -rw-r--r-- 1 boincer umatlas       105 Oct 12 21:27 job.xml
[2025-10-12 22:42:25] -rw-r--r-- 2 boincer umatlas 220418489 Oct 12 21:27 EVNT.46676267._004779.pool.root.1
[2025-10-12 22:42:25] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 21:27 input.tar.gz
[2025-10-12 22:42:25] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 21:27 start_atlas.sh
[2025-10-12 22:42:25] drwxrwx--x 2 boincer umatlas      4096 Oct 12 21:27 shared
[2025-10-12 22:42:25] -rw-r--r-- 1 boincer umatlas         0 Oct 12 21:27 boinc_lockfile
[2025-10-12 22:42:25] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 21:27 pandaJob.out
[2025-10-12 22:42:25] -rw------- 1 boincer umatlas    975595 Oct 12 21:28 agis_schedconf.cvmfs.json
[2025-10-12 22:42:25] -rw------- 1 boincer umatlas   1560580 Oct 12 21:28 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:42:25] drwx------ 5 boincer umatlas      4096 Oct 12 21:28 pilot3
[2025-10-12 22:42:25] -rw-r--r-- 1 boincer umatlas      5951 Oct 12 22:40 init_data.xml
[2025-10-12 22:42:25] -rw------- 1 boincer umatlas 192580132 Oct 12 22:41 HITS.46676269._089730.pool.root.1
[2025-10-12 22:42:25] -rw-r--r-- 1 boincer umatlas       529 Oct 12 22:41 boinc_task_state.xml
[2025-10-12 22:42:25] -rw------- 1 boincer umatlas      1048 Oct 12 22:41 memory_monitor_summary.json
[2025-10-12 22:42:25] -rw------- 1 boincer umatlas    377094 Oct 12 22:41 log.46676269._089730.job.log.tgz.1
[2025-10-12 22:42:25] -rw------- 1 boincer umatlas      7857 Oct 12 22:41 heartbeat.json
[2025-10-12 22:42:25] -rw------- 1 boincer umatlas        95 Oct 12 22:42 pilot_heartbeat.json
[2025-10-12 22:42:25] -rw-r--r-- 1 boincer umatlas        27 Oct 12 22:42 wrapper_checkpoint.txt
[2025-10-12 22:42:25] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 22:42 boinc_mmap_file
[2025-10-12 22:42:25] -rw------- 1 boincer umatlas      4818 Oct 12 22:42 pilotlog.txt
[2025-10-12 22:42:25] -rw------- 1 boincer umatlas    641445 Oct 12 22:42 log.46676269._089730.job.log.1
[2025-10-12 22:42:25] -rw------- 1 boincer umatlas       357 Oct 12 22:42 output.list
[2025-10-12 22:42:25] -rw-r--r-- 1 boincer umatlas       620 Oct 12 22:42 runtime_log
[2025-10-12 22:42:25] -rw------- 1 boincer umatlas   1034240 Oct 12 22:42 result.tar.gz
[2025-10-12 22:42:25] -rw-r--r-- 1 boincer umatlas      8700 Oct 12 22:42 runtime_log.err
[2025-10-12 22:42:25] -rw------- 1 boincer umatlas       658 Oct 12 22:42 BwxMDmjcIS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPblNDmJqcOXo.diag
[2025-10-12 22:42:25] -rw-r--r-- 1 boincer umatlas     21897 Oct 12 22:42 stderr.txt
[2025-10-12 22:42:25] HITS file was successfully produced:
[2025-10-12 22:42:25] -rw------- 1 boincer umatlas 192580132 Oct 12 22:41 shared/HITS.pool.root.1
[2025-10-12 22:42:25]  *** Contents of shared directory: ***
[2025-10-12 22:42:25] total 404916
[2025-10-12 22:42:25] -rw-r--r-- 2 boincer umatlas 220418489 Oct 12 21:27 ATLAS.root_0
[2025-10-12 22:42:25] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 21:27 input.tar.gz
[2025-10-12 22:42:25] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 21:27 start_atlas.sh
[2025-10-12 22:42:25] -rw------- 1 boincer umatlas 192580132 Oct 12 22:41 HITS.pool.root.1
[2025-10-12 22:42:25] -rw------- 1 boincer umatlas   1034240 Oct 12 22:42 result.tar.gz
22:42:27 (8689): run_atlas exited; CPU time 44718.402850
22:42:27 (8689): called boinc_finish(0)

</stderr_txt>
]]>

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