Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:23:46 (22111): wrapper (7.7.26015): starting
21:23:46 (22111): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 21:23:46] Arguments: --nthreads 8
[2025-10-12 21:23:46] Threads: 8
[2025-10-12 21:23:46] Checking for CVMFS
[2025-10-12 21:23:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 21:23:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 21:23:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 21:23:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 21:23:46] 2.11.2.0 25047 53525 111164 151643 0 57 15576584 20275201 917 130560 0 64371007 99.980 2417549 24069 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 21:23:46] CVMFS is ok
[2025-10-12 21:23:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 21:23:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 21:23:46] Further information can be found at the LHC@home message board.
[2025-10-12 21:23:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:23:46] Checking for apptainer binary...
[2025-10-12 21:23:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 21:23:46] Running /usr/bin/apptainer --version
[2025-10-12 21:23:46] apptainer version 1.3.2-1.el7
[2025-10-12 21:23:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:23:47] c-205-37.aglt2.org
[2025-10-12 21:23:47] apptainer works
[2025-10-12 21:23:47] Set ATHENA_PROC_NUMBER=8
[2025-10-12 21:23:47] Set ATHENA_CORE_NUMBER=8
[2025-10-12 21:23:47] Starting ATLAS job with PandaID=6840750106
[2025-10-12 21:23:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:33:12]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:33:12]  scope=mc23_13p6TeV
[2025-10-12 22:33:12]  status=None
[2025-10-12 22:33:12]  status_code=0
[2025-10-12 22:33:12]  storage_token=
[2025-10-12 22:33:12]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6840750106/log.46676269._089485.job.log.tgz.1
[2025-10-12 22:33:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4d/ff/log.46676269._089485.job.log.tgz.1
[2025-10-12 22:33:12]  workdir=None
[2025-10-12 22:33:12] ]
[2025-10-12 22:33:12] 2025-10-13 02:32:05,669 | INFO     | transferring file log.46676269._089485.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6840750106/log.46676269._089485.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 22:33:12] 2025-10-13 02:32:05,669 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6840750106/log.46676269._089485.job.log.tgz.1 /tmp/boinchome/slots/1/log.46676269._089485.job
[2025-10-12 22:33:12] 2025-10-13 02:32:05,689 | INFO     | adding to output.list: log.46676269._089485.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4d/ff/log.46676269._089485.job.log.tg
[2025-10-12 22:33:12] 2025-10-13 02:32:05,689 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 22:33:12] 2025-10-13 02:32:05,689 | INFO     | summary of transferred files:
[2025-10-12 22:33:12] 2025-10-13 02:32:05,689 | INFO     |  -- lfn=log.46676269._089485.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 22:33:12] 2025-10-13 02:32:05,690 | INFO     | stage-out finished correctly
[2025-10-12 22:33:12] 2025-10-13 02:32:05,742 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 22:33:12] 2025-10-13 02:32:06,128 | INFO     | monitor loop #304: job 0:6840750106 is in state 'finished'
[2025-10-12 22:33:12] 2025-10-13 02:32:06,128 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:33:12] 2025-10-13 02:32:06,575 | INFO     | time since job start (4087s) is within the limit (172800.0s)
[2025-10-12 22:33:12] 2025-10-13 02:32:07,663 | INFO     | job 6840750106 has state=finished
[2025-10-12 22:33:12] 2025-10-13 02:32:07,663 | INFO     | preparing for final server update for job 6840750106 in state='finished'
[2025-10-12 22:33:12] 2025-10-13 02:32:07,664 | INFO     | this job has now completed (state=finished)
[2025-10-12 22:33:12] 2025-10-13 02:32:07,664 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 22:33:12] 2025-10-13 02:32:07,664 | INFO     | log transfer has been attempted: DONE
[2025-10-12 22:33:12] 2025-10-13 02:32:07,664 | INFO     | job 6840750106 has finished - writing final server update
[2025-10-12 22:33:12] 2025-10-13 02:32:07,665 | INFO     | total number of processed events: 400 (read)
[2025-10-12 22:33:12] 2025-10-13 02:32:07,665 | INFO     | executing command: lscpu
[2025-10-12 22:33:12] 2025-10-13 02:32:07,697 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 22:33:12] 2025-10-13 02:32:08,578 | INFO     | time since job start (4089s) is within the limit (172800.0s)
[2025-10-12 22:33:12] 2025-10-13 02:32:08,631 | INFO     | monitor loop #305: job 0:6840750106 is in state 'finished'
[2025-10-12 22:33:12] 2025-10-13 02:32:08,631 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:33:12] 2025-10-13 02:32:10,583 | INFO     | time since job start (4091s) is within the limit (172800.0s)
[2025-10-12 22:33:12] 2025-10-13 02:32:11,134 | INFO     | monitor loop #306: job 0:6840750106 is in state 'finished'
[2025-10-12 22:33:12] 2025-10-13 02:32:11,134 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:33:12] 2025-10-13 02:32:12,588 | INFO     | time since job start (4093s) is within the limit (172800.0s)
[2025-10-12 22:33:12] 2025-10-13 02:32:13,157 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 22:33:12] 2025-10-13 02:32:13,160 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 2080.572125
[2025-10-12 22:33:12] 2025-10-13 02:32:13,162 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6840750106/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 22:33:12] 2025-10-13 02:32:13,163 | INFO     | extracted standard info from prmon json
[2025-10-12 22:33:12] 2025-10-13 02:32:13,163 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 22:33:12] 2025-10-13 02:32:13,163 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 22:33:12] 2025-10-13 02:32:13,163 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 22:33:12] 2025-10-13 02:32:13,163 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:33:12] 2025-10-13 02:32:13,165 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:33:12] 2025-10-13 02:32:13,165 | INFO     | sum of square deviations: 66959395.0
[2025-10-12 22:33:12] 2025-10-13 02:32:13,165 | INFO     | sum of deviations: -7058417451.5
[2025-10-12 22:33:12] 2025-10-13 02:32:13,165 | INFO     | mean x: 1760320769.5
[2025-10-12 22:33:12] 2025-10-13 02:32:13,165 | INFO     | mean y: 2682252.05
[2025-10-12 22:33:12] 2025-10-13 02:32:13,165 | INFO     | -- intersect: 185564078672.62262
[2025-10-12 22:33:12] 2025-10-13 02:32:13,165 | INFO     | intersect: 185564078672.62262
[2025-10-12 22:33:12] 2025-10-13 02:32:13,166 | INFO     | chi2: 0.05366852790568926
[2025-10-12 22:33:12] 2025-10-13 02:32:13,166 | INFO     | -- intersect: 185564078672.62262
[2025-10-12 22:33:12] 2025-10-13 02:32:13,166 | INFO     | current memory leak: -105.41 B/s (using 60 data points, chi2=0.05)
[2025-10-12 22:33:12] 2025-10-13 02:32:13,166 | INFO     | could have reported an average CPU frequency of 2222 MHz (6 samples)
[2025-10-12 22:33:12] 2025-10-13 02:32:13,166 | INFO     | ..............................
[2025-10-12 22:33:12] 2025-10-13 02:32:13,166 | INFO     | . Timing measurements:
[2025-10-12 22:33:12] 2025-10-13 02:32:13,166 | INFO     | . get job = 0 s
[2025-10-12 22:33:12] 2025-10-13 02:32:13,166 | INFO     | . initial setup = 2 s
[2025-10-12 22:33:12] 2025-10-13 02:32:13,166 | INFO     | . payload setup = 5 s
[2025-10-12 22:33:12] 2025-10-13 02:32:13,166 | INFO     | . stage-in = 0 s
[2025-10-12 22:33:12] 2025-10-13 02:32:13,167 | INFO     | . payload execution = 4061 s
[2025-10-12 22:33:12] 2025-10-13 02:32:13,167 | INFO     | . stage-out = 0 s
[2025-10-12 22:33:12] 2025-10-13 02:32:13,167 | INFO     | . log creation = 0 s
[2025-10-12 22:33:12] 2025-10-13 02:32:13,167 | INFO     | ..............................
[2025-10-12 22:33:12] 2025-10-13 02:32:13,217 | INFO     | 
[2025-10-12 22:33:12] 2025-10-13 02:32:13,217 | INFO     | job summary report
[2025-10-12 22:33:12] 2025-10-13 02:32:13,218 | INFO     | --------------------------------------------------
[2025-10-12 22:33:12] 2025-10-13 02:32:13,218 | INFO     | PanDA job id: 6840750106
[2025-10-12 22:33:12] 2025-10-13 02:32:13,218 | INFO     | task id: 46676269
[2025-10-12 22:33:12] 2025-10-13 02:32:13,218 | INFO     | errors: (none)
[2025-10-12 22:33:12] 2025-10-13 02:32:13,218 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:33:12] 2025-10-13 02:32:13,218 | INFO     | pilot state: finished 
[2025-10-12 22:33:12] 2025-10-13 02:32:13,218 | INFO     | transexitcode: 0
[2025-10-12 22:33:12] 2025-10-13 02:32:13,218 | INFO     | exeerrorcode: 0
[2025-10-12 22:33:12] 2025-10-13 02:32:13,218 | INFO     | exeerrordiag: 
[2025-10-12 22:33:12] 2025-10-13 02:32:13,219 | INFO     | exitcode: 0
[2025-10-12 22:33:12] 2025-10-13 02:32:13,219 | INFO     | exitmsg: OK
[2025-10-12 22:33:12] 2025-10-13 02:32:13,219 | INFO     | cpuconsumptiontime: 30139 s
[2025-10-12 22:33:12] 2025-10-13 02:32:13,219 | INFO     | nevents: 400
[2025-10-12 22:33:12] 2025-10-13 02:32:13,219 | INFO     | neventsw: 0
[2025-10-12 22:33:12] 2025-10-13 02:32:13,219 | INFO     | pid: 32340
[2025-10-12 22:33:12] 2025-10-13 02:32:13,219 | INFO     | pgrp: 32340
[2025-10-12 22:33:12] 2025-10-13 02:32:13,219 | INFO     | corecount: 8
[2025-10-12 22:33:12] 2025-10-13 02:32:13,219 | INFO     | event service: False
[2025-10-12 22:33:12] 2025-10-13 02:32:13,219 | INFO     | sizes: {0: 2348685, 1: 2348884, 5: 2349146, 11: 2349202, 4071: 2375158, 4072: 2384340, 4079: 2384478}
[2025-10-12 22:33:12] 2025-10-13 02:32:13,220 | INFO     | --------------------------------------------------
[2025-10-12 22:33:12] 2025-10-13 02:32:13,220 | INFO     | 
[2025-10-12 22:33:12] 2025-10-13 02:32:13,220 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 22:33:12] 2025-10-13 02:32:13,241 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:33:12] 2025-10-13 02:32:13,242 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:33:12] 2025-10-13 02:32:13,242 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:33:12] 2025-10-13 02:32:13,242 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:33:12] 2025-10-13 02:32:13,242 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:33:12] 2025-10-13 02:32:13,242 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:33:12] 2025-10-13 02:32:13,242 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:33:12] 2025-10-13 02:32:13,243 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:33:12] 2025-10-13 02:32:13,243 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:33:12] 2025-10-13 02:32:13,243 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:33:12] 2025-10-13 02:32:13,243 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:33:12] 2025-10-13 02:32:13,243 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:33:12] 2025-10-13 02:32:13,243 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:33:12] 2025-10-13 02:32:13,243 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:33:12] 2025-10-13 02:32:13,243 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:33:12] 2025-10-13 02:32:13,243 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:33:12] 2025-10-13 02:32:13,244 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:33:12] 2025-10-13 02:32:13,244 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:33:12] 2025-10-13 02:32:13,244 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:33:12] 2025-10-13 02:32:13,244 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:33:12] 2025-10-13 02:32:13,244 | INFO     | job 6840750106 has completed (purged errors)
[2025-10-12 22:33:12] 2025-10-13 02:32:13,244 | INFO     | overall cleanup function is called
[2025-10-12 22:33:12] 2025-10-13 02:32:14,252 | INFO     | --- collectZombieJob: --- 10, [32340]
[2025-10-12 22:33:12] 2025-10-13 02:32:14,252 | INFO     | zombie collector waiting for pid 32340
[2025-10-12 22:33:12] 2025-10-13 02:32:14,252 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:33:12] 2025-10-13 02:32:14,252 | INFO     | collected zombie processes
[2025-10-12 22:33:12] 2025-10-13 02:32:14,252 | INFO     | will attempt to kill all subprocesses of pid=32340
[2025-10-12 22:33:12] 2025-10-13 02:32:14,370 | INFO     | process IDs to be killed: [32340] (in reverse order)
[2025-10-12 22:33:12] 2025-10-13 02:32:14,412 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:33:12] 2025-10-13 02:32:14,413 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:33:12] 2025-10-13 02:32:14,417 | INFO     | did not find any defunct processes belonging to 32340
[2025-10-12 22:33:12] 2025-10-13 02:32:14,420 | INFO     | did not find any defunct processes belonging to 32340
[2025-10-12 22:33:12] 2025-10-13 02:32:14,421 | INFO     | ready for new job
[2025-10-12 22:33:12] 2025-10-13 02:32:14,421 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:33:12] 2025-10-13 02:32:14,423 | INFO     | ***************************************
[2025-10-12 22:33:12] 2025-10-13 02:32:14,423 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:33:12] 2025-10-13 02:32:14,423 | INFO     | ***************************************
[2025-10-12 22:33:12] 2025-10-13 02:32:14,423 | INFO     | 
[2025-10-12 22:33:12] 2025-10-13 02:32:14,425 | INFO     | architecture information:
[2025-10-12 22:33:12] 2025-10-13 02:32:14,425 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:33:12] 2025-10-13 02:32:14,440 | INFO     | cat /etc/os-release:
[2025-10-12 22:33:12] NAME="CentOS Linux"
[2025-10-12 22:33:12] VERSION="7 (Core)"
[2025-10-12 22:33:12] ID="centos"
[2025-10-12 22:33:12] ID_LIKE="rhel fedora"
[2025-10-12 22:33:12] VERSION_ID="7"
[2025-10-12 22:33:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:33:12] ANSI_COLOR="0;31"
[2025-10-12 22:33:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:33:12] HOME_URL="https://www.centos.org/"
[2025-10-12 22:33:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:33:12] 
[2025-10-12 22:33:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:33:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:33:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:33:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:33:12] 
[2025-10-12 22:33:12] 2025-10-13 02:32:14,441 | INFO     | ***************************************
[2025-10-12 22:33:12] 2025-10-13 02:32:14,944 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 22:33:12] 2025-10-13 02:32:14,962 | INFO     | sufficient remaining disk space (32874954752 B)
[2025-10-12 22:33:12] 2025-10-13 02:32:14,963 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:33:12] 2025-10-13 02:32:14,963 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:33:12] 2025-10-13 02:32:14,963 | INFO     | update_server=False
[2025-10-12 22:33:12] 2025-10-13 02:32:14,963 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:33:12] 2025-10-13 02:32:14,964 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:33:12] 2025-10-13 02:32:14,964 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:33:12] 2025-10-13 02:32:14,964 | INFO     | aborting loop
[2025-10-12 22:33:12] 2025-10-13 02:32:15,603 | INFO     | all data control threads have been joined
[2025-10-12 22:33:12] 2025-10-13 02:32:15,930 | INFO     | all job control threads have been joined
[2025-10-12 22:33:12] 2025-10-13 02:32:15,969 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:33:12] 2025-10-13 02:32:15,970 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:33:12] 2025-10-13 02:32:15,970 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:33:12] 2025-10-13 02:32:16,255 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:33:12] 2025-10-13 02:32:16,319 | INFO     | all payload control threads have been joined
[2025-10-12 22:33:12] 2025-10-13 02:32:16,334 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:33:12] 2025-10-13 02:32:16,434 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:33:12] 2025-10-13 02:32:16,606 | INFO     | [data] control thread has finished
[2025-10-12 22:33:12] 2025-10-13 02:32:16,936 | INFO     | [job] control thread has finished
[2025-10-12 22:33:12] 2025-10-13 02:32:16,959 | INFO     | [job] validate thread has finished
[2025-10-12 22:33:12] 2025-10-13 02:32:17,054 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:33:12] 2025-10-13 02:32:17,157 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:33:12] 2025-10-13 02:32:17,218 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:33:12] 2025-10-13 02:32:17,325 | INFO     | [payload] control thread has finished
[2025-10-12 22:33:12] 2025-10-13 02:32:17,361 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:33:12] 2025-10-13 02:32:17,514 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:33:12] 2025-10-13 02:32:18,260 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:33:12] 2025-10-13 02:32:20,340 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:33:12] 2025-10-13 02:32:25,759 | INFO     | job.realtimelogging is not enabled
[2025-10-12 22:33:12] 2025-10-13 02:32:26,765 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:33:12] 2025-10-13 02:32:45,834 | INFO     | PID=25817 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 22:33:12] 2025-10-13 02:32:45,834 | INFO     | .. there are 2 such processes running
[2025-10-12 22:33:12] 2025-10-13 02:32:45,835 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:33:12] 2025-10-13 02:32:45,835 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:33:12] 2025-10-13 02:32:45,835 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:33:12] 2025-10-13 02:33:05,563 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:33:12] 2025-10-13 02:33:07,083 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140390623651648)>', '<ExcThread(monitor, started 140390065764096)>']
[2025-10-12 22:33:12] 2025-10-13 02:33:07,941 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:33:12] 2025-10-13 02:33:07,941 | INFO     | [monitor] control thread has ended
[2025-10-12 22:33:12] 2025-10-13 02:33:12,108 | INFO     | all workflow threads have been joined
[2025-10-12 22:33:12] 2025-10-13 02:33:12,109 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:33:12] 2025-10-13 02:33:12,109 | INFO     | traces error code: 0
[2025-10-12 22:33:12] 2025-10-13 02:33:12,110 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:33:12] 2025-10-13 02:33:12,233 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:33:12] 2025-10-13 02:33:12,236 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:33:12] 2025-10-13 02:33:12,240 [wrapper] pilotpid: 25817
[2025-10-12 22:33:12] 2025-10-13 02:33:12,243 [wrapper] Pilot exit status: 0
[2025-10-12 22:33:12] 2025-10-13 02:33:12,253 [wrapper] pandaids: 6840750106
[2025-10-12 22:33:12] 2025-10-13 02:33:12,284 [wrapper] cleanup supervisor_pilot 19986 25818
[2025-10-12 22:33:12] 2025-10-13 02:33:12,287 [wrapper] Test setup, not cleaning
[2025-10-12 22:33:12] 2025-10-13 02:33:12,290 [wrapper] apfmon messages muted
[2025-10-12 22:33:12] 2025-10-13 02:33:12,292 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:33:12] 2025-10-13 02:33:12,295 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:33:12]  *** Error codes and diagnostics ***
[2025-10-12 22:33:12]     "exeErrorCode": 0,
[2025-10-12 22:33:12]     "exeErrorDiag": "",
[2025-10-12 22:33:12]     "pilotErrorCode": 0,
[2025-10-12 22:33:12]     "pilotErrorDiag": "",
[2025-10-12 22:33:12]  *** Listing of results directory ***
[2025-10-12 22:33:12] total 418812
[2025-10-12 22:33:12] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 16:55 pilot3.tar.gz
[2025-10-12 22:33:12] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 17:07 queuedata.json
[2025-10-12 22:33:12] -rwx------ 1 boincer umatlas     36292 Oct 12 17:07 runpilot2-wrapper.sh
[2025-10-12 22:33:12] -rw-r--r-- 1 boincer umatlas       100 Oct 12 21:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:33:12] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 21:23 run_atlas
[2025-10-12 22:33:12] -rw-r--r-- 1 boincer umatlas       105 Oct 12 21:23 job.xml
[2025-10-12 22:33:12] -rw-r--r-- 2 boincer umatlas 223034393 Oct 12 21:23 EVNT.46676267._004769.pool.root.1
[2025-10-12 22:33:12] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 21:23 start_atlas.sh
[2025-10-12 22:33:12] drwxrwx--x 2 boincer umatlas      4096 Oct 12 21:23 shared
[2025-10-12 22:33:12] -rw-r--r-- 2 boincer umatlas    569678 Oct 12 21:23 input.tar.gz
[2025-10-12 22:33:12] -rw-r--r-- 1 boincer umatlas         0 Oct 12 21:23 boinc_lockfile
[2025-10-12 22:33:12] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 21:23 pandaJob.out
[2025-10-12 22:33:12] -rw------- 1 boincer umatlas    975595 Oct 12 21:23 agis_schedconf.cvmfs.json
[2025-10-12 22:33:12] -rw------- 1 boincer umatlas   1560580 Oct 12 21:23 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:33:12] drwx------ 5 boincer umatlas      4096 Oct 12 21:23 pilot3
[2025-10-12 22:33:12] -rw-r--r-- 1 boincer umatlas      6135 Oct 12 22:29 init_data.xml
[2025-10-12 22:33:12] -rw------- 1 boincer umatlas 200057761 Oct 12 22:31 HITS.46676269._089485.pool.root.1
[2025-10-12 22:33:12] -rw-r--r-- 1 boincer umatlas       529 Oct 12 22:31 boinc_task_state.xml
[2025-10-12 22:33:12] -rw------- 1 boincer umatlas        95 Oct 12 22:31 pilot_heartbeat.json
[2025-10-12 22:33:12] -rw------- 1 boincer umatlas      1047 Oct 12 22:32 memory_monitor_summary.json
[2025-10-12 22:33:12] -rw------- 1 boincer umatlas    321254 Oct 12 22:32 log.46676269._089485.job.log.tgz.1
[2025-10-12 22:33:12] -rw------- 1 boincer umatlas      7845 Oct 12 22:32 heartbeat.json
[2025-10-12 22:33:12] -rw-r--r-- 1 boincer umatlas        27 Oct 12 22:32 wrapper_checkpoint.txt
[2025-10-12 22:33:12] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 22:32 boinc_mmap_file
[2025-10-12 22:33:12] -rw------- 1 boincer umatlas      4893 Oct 12 22:33 pilotlog.txt
[2025-10-12 22:33:12] -rw------- 1 boincer umatlas    611992 Oct 12 22:33 log.46676269._089485.job.log.1
[2025-10-12 22:33:12] -rw------- 1 boincer umatlas       357 Oct 12 22:33 output.list
[2025-10-12 22:33:12] -rw-r--r-- 1 boincer umatlas       620 Oct 12 22:33 runtime_log
[2025-10-12 22:33:12] -rw------- 1 boincer umatlas    952320 Oct 12 22:33 result.tar.gz
[2025-10-12 22:33:12] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 22:33 runtime_log.err
[2025-10-12 22:33:12] -rw------- 1 boincer umatlas       658 Oct 12 22:33 l87KDmrSIS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmp3UMDmGPJUFo.diag
[2025-10-12 22:33:12] -rw-r--r-- 1 boincer umatlas     21855 Oct 12 22:33 stderr.txt
[2025-10-12 22:33:12] HITS file was successfully produced:
[2025-10-12 22:33:12] -rw------- 1 boincer umatlas 200057761 Oct 12 22:31 shared/HITS.pool.root.1
[2025-10-12 22:33:12]  *** Contents of shared directory: ***
[2025-10-12 22:33:12] total 414692
[2025-10-12 22:33:12] -rw-r--r-- 2 boincer umatlas 223034393 Oct 12 21:23 ATLAS.root_0
[2025-10-12 22:33:12] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 21:23 start_atlas.sh
[2025-10-12 22:33:12] -rw-r--r-- 2 boincer umatlas    569678 Oct 12 21:23 input.tar.gz
[2025-10-12 22:33:12] -rw------- 1 boincer umatlas 200057761 Oct 12 22:31 HITS.pool.root.1
[2025-10-12 22:33:12] -rw------- 1 boincer umatlas    952320 Oct 12 22:33 result.tar.gz
22:33:14 (22111): run_atlas exited; CPU time 30149.787787
22:33:14 (22111): called boinc_finish(0)

</stderr_txt>
]]>

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