Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:25:55 (1136828): wrapper (7.7.26015): starting
21:25:55 (1136828): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 21:25:55] Arguments: --nthreads 8
[2025-10-12 21:25:55] Threads: 8
[2025-10-12 21:25:55] Checking for CVMFS
[2025-10-12 21:25:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 21:25:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 21:25:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 21:25:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 21:25:56] 2.13.2.0 2191370 130038 501208 151643 1 304 23661782 32935936 45346 16776704 0 435856143 99.667 383382468 17163 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 21:25:56] CVMFS is ok
[2025-10-12 21:25:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 21:25:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 21:25:56] Further information can be found at the LHC@home message board.
[2025-10-12 21:25:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:25:56] Checking for apptainer binary...
[2025-10-12 21:25:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 21:25:56] Running /usr/bin/apptainer --version
[2025-10-12 21:25:56] apptainer version 1.4.3-1.el9
[2025-10-12 21:25:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:25:56] c7-2-14.aglt2.org
[2025-10-12 21:25:56] apptainer works
[2025-10-12 21:25:56] Set ATHENA_PROC_NUMBER=8
[2025-10-12 21:25:56] Set ATHENA_CORE_NUMBER=8
[2025-10-12 21:25:56] Starting ATLAS job with PandaID=6840749349
[2025-10-12 21:25:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:43:52]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:43:52] 2025-10-13 03:42:56,194 | INFO     | time since job start (8185s) is within the limit (172800.0s)
[2025-10-12 23:43:52] 2025-10-13 03:42:56,250 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 23:43:52] 2025-10-13 03:42:56,269 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3242.519062500002
[2025-10-12 23:43:52] 2025-10-13 03:42:56,287 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6840749349/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 23:43:52] 2025-10-13 03:42:56,287 | INFO     | extracted standard info from prmon json
[2025-10-12 23:43:52] 2025-10-13 03:42:56,287 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 23:43:52] 2025-10-13 03:42:56,288 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 23:43:52] 2025-10-13 03:42:56,288 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 23:43:52] 2025-10-13 03:42:56,288 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:43:52] 2025-10-13 03:42:56,288 | INFO     | monitor loop #531: job 0:6840749349 is in state 'finished'
[2025-10-12 23:43:52] 2025-10-13 03:42:56,289 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:43:52] 2025-10-13 03:42:56,290 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:43:52] 2025-10-13 03:42:56,290 | INFO     | sum of square deviations: 746051197.5
[2025-10-12 23:43:52] 2025-10-13 03:42:56,291 | INFO     | sum of deviations: 17733194039.000004
[2025-10-12 23:43:52] 2025-10-13 03:42:56,291 | INFO     | mean x: 1760322898.5
[2025-10-12 23:43:52] 2025-10-13 03:42:56,291 | INFO     | mean y: 2403405.925373134
[2025-10-12 23:43:52] 2025-10-13 03:42:56,291 | INFO     | -- intersect: -41839426799.561844
[2025-10-12 23:43:52] 2025-10-13 03:42:56,291 | INFO     | intersect: -41839426799.561844
[2025-10-12 23:43:52] 2025-10-13 03:42:56,291 | INFO     | chi2: 4.106693704968094
[2025-10-12 23:43:52] 2025-10-13 03:42:56,291 | INFO     | sum of square deviations: 665612480.0
[2025-10-12 23:43:52] 2025-10-13 03:42:56,292 | INFO     | sum of deviations: 25733246866.00003
[2025-10-12 23:43:52] 2025-10-13 03:42:56,292 | INFO     | mean x: 1760322746.0
[2025-10-12 23:43:52] 2025-10-13 03:42:56,292 | INFO     | mean y: 2418075.7674418604
[2025-10-12 23:43:52] 2025-10-13 03:42:56,292 | INFO     | -- intersect: -68053426950.83583
[2025-10-12 23:43:52] 2025-10-13 03:42:56,292 | INFO     | intersect: -68053426950.83583
[2025-10-12 23:43:52] 2025-10-13 03:42:56,303 | INFO     | chi2: 3.371677208413099
[2025-10-12 23:43:52] 2025-10-13 03:42:56,304 | INFO     | current chi2=3.371677208413099 (change=17.898011134012865 %)
[2025-10-12 23:43:52] 2025-10-13 03:42:56,304 | INFO     | right removable region: 128
[2025-10-12 23:43:52] 2025-10-13 03:42:56,304 | INFO     | sum of square deviations: 665612480.0
[2025-10-12 23:43:52] 2025-10-13 03:42:56,304 | INFO     | sum of deviations: -17605727158.0
[2025-10-12 23:43:52] 2025-10-13 03:42:56,305 | INFO     | mean x: 1760323051.0
[2025-10-12 23:43:52] 2025-10-13 03:42:56,305 | INFO     | mean y: 2470108.8294573645
[2025-10-12 23:43:52] 2025-10-13 03:42:56,305 | INFO     | -- intersect: 46563747544.37892
[2025-10-12 23:43:52] 2025-10-13 03:42:56,305 | INFO     | intersect: 46563747544.37892
[2025-10-12 23:43:52] 2025-10-13 03:42:56,305 | INFO     | chi2: 1.1038626061582484
[2025-10-12 23:43:52] 2025-10-13 03:42:56,305 | INFO     | current chi2=1.1038626061582484 (change=73.12040572144825 %)
[2025-10-12 23:43:52] 2025-10-13 03:42:56,305 | INFO     | sum of square deviations: 591173875.0
[2025-10-12 23:43:52] 2025-10-13 03:42:56,306 | INFO     | sum of deviations: -24745206228.5
[2025-10-12 23:43:52] 2025-10-13 03:42:56,306 | INFO     | mean x: 1760323203.5
[2025-10-12 23:43:52] 2025-10-13 03:42:56,306 | INFO     | mean y: 2484549.8467741935
[2025-10-12 23:43:52] 2025-10-13 03:42:56,306 | INFO     | -- intersect: 73685647053.30022
[2025-10-12 23:43:52] 2025-10-13 03:42:56,306 | INFO     | intersect: 73685647053.30022
[2025-10-12 23:43:52] 2025-10-13 03:42:56,306 | INFO     | chi2: 0.8976572738539175
[2025-10-12 23:43:52] 2025-10-13 03:42:56,306 | INFO     | current chi2=0.8976572738539175 (change=18.680344016904723 %)
[2025-10-12 23:43:52] 2025-10-13 03:42:56,306 | INFO     | left removable region: 20
[2025-10-12 23:43:52] 2025-10-13 03:42:56,306 | INFO     | sum of square deviations: 390582207.0
[2025-10-12 23:43:52] 2025-10-13 03:42:56,307 | INFO     | sum of deviations: -11102715743.5
[2025-10-12 23:43:52] 2025-10-13 03:42:56,307 | INFO     | mean x: 1760323325.5
[2025-10-12 23:43:52] 2025-10-13 03:42:56,307 | INFO     | mean y: 2492450.25
[2025-10-12 23:43:52] 2025-10-13 03:42:56,307 | INFO     | -- intersect: 50041560153.29855
[2025-10-12 23:43:52] 2025-10-13 03:42:56,307 | INFO     | intersect: 50041560153.29855
[2025-10-12 23:43:52] 2025-10-13 03:42:56,307 | INFO     | chi2: 0.08932431160977151
[2025-10-12 23:43:52] 2025-10-13 03:42:56,307 | INFO     | -- intersect: 50041560153.29855
[2025-10-12 23:43:52] 2025-10-13 03:42:56,322 | INFO     | current memory leak: -28.43 B/s (using 108 data points, chi2=0.09)
[2025-10-12 23:43:52] 2025-10-13 03:42:56,323 | INFO     | could have reported an average CPU frequency of 3239 MHz (8 samples)
[2025-10-12 23:43:52] 2025-10-13 03:42:56,323 | INFO     | ..............................
[2025-10-12 23:43:52] 2025-10-13 03:42:56,323 | INFO     | . Timing measurements:
[2025-10-12 23:43:52] 2025-10-13 03:42:56,323 | INFO     | . get job = 0 s
[2025-10-12 23:43:52] 2025-10-13 03:42:56,323 | INFO     | . initial setup = 5 s
[2025-10-12 23:43:52] 2025-10-13 03:42:56,323 | INFO     | . payload setup = 18 s
[2025-10-12 23:43:52] 2025-10-13 03:42:56,324 | INFO     | . stage-in = 0 s
[2025-10-12 23:43:52] 2025-10-13 03:42:56,324 | INFO     | . payload execution = 8129 s
[2025-10-12 23:43:52] 2025-10-13 03:42:56,324 | INFO     | . stage-out = 1 s
[2025-10-12 23:43:52] 2025-10-13 03:42:56,324 | INFO     | . log creation = 0 s
[2025-10-12 23:43:52] 2025-10-13 03:42:56,324 | INFO     | ..............................
[2025-10-12 23:43:52] 2025-10-13 03:42:56,529 | INFO     | 
[2025-10-12 23:43:52] 2025-10-13 03:42:56,531 | INFO     | job summary report
[2025-10-12 23:43:52] 2025-10-13 03:42:56,531 | INFO     | --------------------------------------------------
[2025-10-12 23:43:52] 2025-10-13 03:42:56,531 | INFO     | PanDA job id: 6840749349
[2025-10-12 23:43:52] 2025-10-13 03:42:56,531 | INFO     | task id: 46676269
[2025-10-12 23:43:52] 2025-10-13 03:42:56,531 | INFO     | errors: (none)
[2025-10-12 23:43:52] 2025-10-13 03:42:56,531 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:43:52] 2025-10-13 03:42:56,531 | INFO     | pilot state: finished 
[2025-10-12 23:43:52] 2025-10-13 03:42:56,531 | INFO     | transexitcode: 0
[2025-10-12 23:43:52] 2025-10-13 03:42:56,531 | INFO     | exeerrorcode: 0
[2025-10-12 23:43:52] 2025-10-13 03:42:56,531 | INFO     | exeerrordiag: 
[2025-10-12 23:43:52] 2025-10-13 03:42:56,531 | INFO     | exitcode: 0
[2025-10-12 23:43:52] 2025-10-13 03:42:56,531 | INFO     | exitmsg: OK
[2025-10-12 23:43:52] 2025-10-13 03:42:56,531 | INFO     | cpuconsumptiontime: 31671 s
[2025-10-12 23:43:52] 2025-10-13 03:42:56,532 | INFO     | nevents: 400
[2025-10-12 23:43:52] 2025-10-13 03:42:56,532 | INFO     | neventsw: 0
[2025-10-12 23:43:52] 2025-10-13 03:42:56,532 | INFO     | pid: 1148264
[2025-10-12 23:43:52] 2025-10-13 03:42:56,532 | INFO     | pgrp: 1148264
[2025-10-12 23:43:52] 2025-10-13 03:42:56,532 | INFO     | corecount: 8
[2025-10-12 23:43:52] 2025-10-13 03:42:56,532 | INFO     | event service: False
[2025-10-12 23:43:52] 2025-10-13 03:42:56,532 | INFO     | sizes: {0: 2348630, 1: 2348885, 11: 2349147, 12: 2349175, 8151: 2376974, 8152: 2385972, 8153: 2386156, 8164: 2386350}
[2025-10-12 23:43:52] 2025-10-13 03:42:56,532 | INFO     | --------------------------------------------------
[2025-10-12 23:43:52] 2025-10-13 03:42:56,532 | INFO     | 
[2025-10-12 23:43:52] 2025-10-13 03:42:56,532 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 23:43:52] 2025-10-13 03:42:56,590 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:43:52] 2025-10-13 03:42:56,598 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:43:52] 2025-10-13 03:42:56,598 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:43:52] 2025-10-13 03:42:56,598 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:43:52] 2025-10-13 03:42:56,598 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:43:52] 2025-10-13 03:42:56,598 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:43:52] 2025-10-13 03:42:56,598 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:43:52] 2025-10-13 03:42:56,598 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:43:52] 2025-10-13 03:42:56,598 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:43:52] 2025-10-13 03:42:56,598 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:43:52] 2025-10-13 03:42:56,598 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:43:52] 2025-10-13 03:42:56,598 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:43:52] 2025-10-13 03:42:56,598 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:43:52] 2025-10-13 03:42:56,599 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:43:52] 2025-10-13 03:42:56,599 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:43:52] 2025-10-13 03:42:56,599 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:43:52] 2025-10-13 03:42:56,599 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:43:52] 2025-10-13 03:42:56,599 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:43:52] 2025-10-13 03:42:56,599 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:43:52] 2025-10-13 03:42:56,599 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:43:52] 2025-10-13 03:42:56,599 | INFO     | job 6840749349 has completed (purged errors)
[2025-10-12 23:43:52] 2025-10-13 03:42:56,599 | INFO     | overall cleanup function is called
[2025-10-12 23:43:52] 2025-10-13 03:42:57,626 | INFO     | --- collectZombieJob: --- 10, [1148264]
[2025-10-12 23:43:52] 2025-10-13 03:42:57,627 | INFO     | zombie collector waiting for pid 1148264
[2025-10-12 23:43:52] 2025-10-13 03:42:57,627 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:43:52] 2025-10-13 03:42:57,627 | INFO     | collected zombie processes
[2025-10-12 23:43:52] 2025-10-13 03:42:57,627 | INFO     | will attempt to kill all subprocesses of pid=1148264
[2025-10-12 23:43:52] 2025-10-13 03:42:58,317 | INFO     | process IDs to be killed: [1148264] (in reverse order)
[2025-10-12 23:43:52] 2025-10-13 03:42:58,514 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:43:52] 2025-10-13 03:42:58,514 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:43:52] 2025-10-13 03:42:58,625 | INFO     | did not find any defunct processes belonging to 1148264
[2025-10-12 23:43:52] 2025-10-13 03:42:58,735 | INFO     | did not find any defunct processes belonging to 1148264
[2025-10-12 23:43:52] 2025-10-13 03:42:58,736 | INFO     | ready for new job
[2025-10-12 23:43:52] 2025-10-13 03:42:58,736 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:43:52] 2025-10-13 03:42:58,738 | INFO     | ***************************************
[2025-10-12 23:43:52] 2025-10-13 03:42:58,738 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:43:52] 2025-10-13 03:42:58,738 | INFO     | ***************************************
[2025-10-12 23:43:52] 2025-10-13 03:42:58,738 | INFO     | 
[2025-10-12 23:43:52] 2025-10-13 03:42:58,770 | INFO     | architecture information:
[2025-10-12 23:43:52] 2025-10-13 03:42:58,775 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:43:52] 2025-10-13 03:42:58,818 | INFO     | cat /etc/os-release:
[2025-10-12 23:43:52] NAME="CentOS Linux"
[2025-10-12 23:43:52] VERSION="7 (Core)"
[2025-10-12 23:43:52] ID="centos"
[2025-10-12 23:43:52] ID_LIKE="rhel fedora"
[2025-10-12 23:43:52] VERSION_ID="7"
[2025-10-12 23:43:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:43:52] ANSI_COLOR="0;31"
[2025-10-12 23:43:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:43:52] HOME_URL="https://www.centos.org/"
[2025-10-12 23:43:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:43:52] 
[2025-10-12 23:43:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:43:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:43:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:43:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:43:52] 
[2025-10-12 23:43:52] 2025-10-13 03:42:58,819 | INFO     | ***************************************
[2025-10-12 23:43:52] 2025-10-13 03:42:59,321 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 23:43:52] 2025-10-13 03:42:59,342 | INFO     | sufficient remaining disk space (74286366720 B)
[2025-10-12 23:43:52] 2025-10-13 03:42:59,342 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:43:52] 2025-10-13 03:42:59,342 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:43:52] 2025-10-13 03:42:59,342 | INFO     | update_server=False
[2025-10-12 23:43:52] 2025-10-13 03:42:59,343 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:43:52] 2025-10-13 03:42:59,366 | INFO     | all data control threads have been joined
[2025-10-12 23:43:52] 2025-10-13 03:42:59,822 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:43:52] 2025-10-13 03:42:59,822 | INFO     | aborting loop
[2025-10-12 23:43:52] 2025-10-13 03:43:00,046 | INFO     | all job control threads have been joined
[2025-10-12 23:43:52] 2025-10-13 03:43:00,076 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:43:52] 2025-10-13 03:43:00,220 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:43:52] 2025-10-13 03:43:00,357 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:43:52] 2025-10-13 03:43:00,377 | INFO     | [data] control thread has finished
[2025-10-12 23:43:52] 2025-10-13 03:43:00,499 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:43:52] 2025-10-13 03:43:00,539 | INFO     | all payload control threads have been joined
[2025-10-12 23:43:52] 2025-10-13 03:43:00,620 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:43:52] 2025-10-13 03:43:00,828 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:43:52] 2025-10-13 03:43:01,045 | INFO     | [job] validate thread has finished
[2025-10-12 23:43:52] 2025-10-13 03:43:01,052 | INFO     | [job] control thread has finished
[2025-10-12 23:43:52] 2025-10-13 03:43:01,378 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:43:52] 2025-10-13 03:43:01,498 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:43:52] 2025-10-13 03:43:01,545 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:43:52] 2025-10-13 03:43:01,546 | INFO     | [payload] control thread has finished
[2025-10-12 23:43:52] 2025-10-13 03:43:01,600 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:43:52] 2025-10-13 03:43:01,796 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:43:52] 2025-10-13 03:43:01,940 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:43:52] 2025-10-13 03:43:02,082 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:43:52] 2025-10-13 03:43:02,551 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:43:52] 2025-10-13 03:43:04,232 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:43:52] 2025-10-13 03:43:30,306 | INFO     | PID=1141268 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 23:43:52] 2025-10-13 03:43:30,307 | INFO     | .. there are 55 such processes running
[2025-10-12 23:43:52] 2025-10-13 03:43:30,307 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:43:52] 2025-10-13 03:43:30,307 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:43:52] 2025-10-13 03:43:30,307 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:43:52] 2025-10-13 03:43:44,900 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:43:52] 2025-10-13 03:43:46,276 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140413282907968)>', '<ExcThread(monitor, started 140412798883584)>']
[2025-10-12 23:43:52] 2025-10-13 03:43:46,403 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:43:52] 2025-10-13 03:43:46,404 | INFO     | [monitor] control thread has ended
[2025-10-12 23:43:52] 2025-10-13 03:43:51,302 | INFO     | all workflow threads have been joined
[2025-10-12 23:43:52] 2025-10-13 03:43:51,303 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:43:52] 2025-10-13 03:43:51,303 | INFO     | traces error code: 0
[2025-10-12 23:43:52] 2025-10-13 03:43:51,303 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:43:52] 2025-10-13 03:43:51,452 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:43:52] 2025-10-13 03:43:51,455 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:43:52] 2025-10-13 03:43:51,486 [wrapper] pilotpid: 1141268
[2025-10-12 23:43:52] 2025-10-13 03:43:51,496 [wrapper] Pilot exit status: 0
[2025-10-12 23:43:52] 2025-10-13 03:43:51,531 [wrapper] pandaids: 6840749349
[2025-10-12 23:43:52] 2025-10-13 03:43:51,671 [wrapper] cleanup supervisor_pilot 1812705 1141269
[2025-10-12 23:43:52] 2025-10-13 03:43:51,693 [wrapper] Test setup, not cleaning
[2025-10-12 23:43:52] 2025-10-13 03:43:51,721 [wrapper] apfmon messages muted
[2025-10-12 23:43:52] 2025-10-13 03:43:51,746 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:43:52] 2025-10-13 03:43:51,755 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:43:52]  *** Error codes and diagnostics ***
[2025-10-12 23:43:52]     "exeErrorCode": 0,
[2025-10-12 23:43:52]     "exeErrorDiag": "",
[2025-10-12 23:43:52]     "pilotErrorCode": 0,
[2025-10-12 23:43:52]     "pilotErrorDiag": "",
[2025-10-12 23:43:52]  *** Listing of results directory ***
[2025-10-12 23:43:52] total 416160
[2025-10-12 23:43:52] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 16:23 pilot3.tar.gz
[2025-10-12 23:43:52] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 16:38 queuedata.json
[2025-10-12 23:43:52] -rwx------. 1 boincer umatlas     36292 Oct 12 16:38 runpilot2-wrapper.sh
[2025-10-12 23:43:52] -rw-r--r--. 1 boincer umatlas       100 Oct 12 21:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:43:52] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 21:25 run_atlas
[2025-10-12 23:43:52] -rw-r--r--. 1 boincer umatlas       105 Oct 12 21:25 job.xml
[2025-10-12 23:43:52] -rw-r--r--. 2 boincer umatlas 221309483 Oct 12 21:25 EVNT.46676267._004854.pool.root.1
[2025-10-12 23:43:52] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 21:25 input.tar.gz
[2025-10-12 23:43:52] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 21:25 start_atlas.sh
[2025-10-12 23:43:52] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 21:25 shared
[2025-10-12 23:43:52] -rw-r--r--. 1 boincer umatlas         0 Oct 12 21:25 boinc_lockfile
[2025-10-12 23:43:52] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 21:25 pandaJob.out
[2025-10-12 23:43:52] -rw-------. 1 boincer umatlas    975595 Oct 12 21:26 agis_schedconf.cvmfs.json
[2025-10-12 23:43:52] -rw-------. 1 boincer umatlas   1560580 Oct 12 21:26 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:43:52] drwx------. 5 boincer umatlas      4096 Oct 12 21:26 pilot3
[2025-10-12 23:43:52] -rw-r--r--. 1 boincer umatlas      6934 Oct 12 23:36 init_data.xml
[2025-10-12 23:43:52] -rw-------. 1 boincer umatlas 198000224 Oct 12 23:42 HITS.46676269._088870.pool.root.1
[2025-10-12 23:43:52] -rw-r--r--. 1 boincer umatlas       530 Oct 12 23:42 boinc_task_state.xml
[2025-10-12 23:43:52] -rw-------. 1 boincer umatlas      1045 Oct 12 23:42 memory_monitor_summary.json
[2025-10-12 23:43:52] -rw-------. 1 boincer umatlas    375544 Oct 12 23:42 log.46676269._088870.job.log.tgz.1
[2025-10-12 23:43:52] -rw-------. 1 boincer umatlas      7800 Oct 12 23:42 heartbeat.json
[2025-10-12 23:43:52] -rw-------. 1 boincer umatlas        95 Oct 12 23:42 pilot_heartbeat.json
[2025-10-12 23:43:52] -rw-------. 1 boincer umatlas      4824 Oct 12 23:43 pilotlog.txt
[2025-10-12 23:43:52] -rw-------. 1 boincer umatlas   1091998 Oct 12 23:43 log.46676269._088870.job.log.1
[2025-10-12 23:43:52] -rw-------. 1 boincer umatlas       357 Oct 12 23:43 output.list
[2025-10-12 23:43:52] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 23:43 boinc_mmap_file
[2025-10-12 23:43:52] -rw-r--r--. 1 boincer umatlas       620 Oct 12 23:43 runtime_log
[2025-10-12 23:43:52] -rw-------. 1 boincer umatlas   1484800 Oct 12 23:43 result.tar.gz
[2025-10-12 23:43:52] -rw-r--r--. 1 boincer umatlas      8698 Oct 12 23:43 runtime_log.err
[2025-10-12 23:43:52] -rw-------. 1 boincer umatlas       655 Oct 12 23:43 C4qKDmh0HS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjyUMDmfvlCEo.diag
[2025-10-12 23:43:52] -rw-r--r--. 1 boincer umatlas        27 Oct 12 23:43 wrapper_checkpoint.txt
[2025-10-12 23:43:52] -rw-r--r--. 1 boincer umatlas     21123 Oct 12 23:43 stderr.txt
[2025-10-12 23:43:52] HITS file was successfully produced:
[2025-10-12 23:43:52] -rw-------. 1 boincer umatlas 198000224 Oct 12 23:42 shared/HITS.pool.root.1
[2025-10-12 23:43:52]  *** Contents of shared directory: ***
[2025-10-12 23:43:52] total 411520
[2025-10-12 23:43:52] -rw-r--r--. 2 boincer umatlas 221309483 Oct 12 21:25 ATLAS.root_0
[2025-10-12 23:43:52] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 21:25 input.tar.gz
[2025-10-12 23:43:52] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 21:25 start_atlas.sh
[2025-10-12 23:43:52] -rw-------. 1 boincer umatlas 198000224 Oct 12 23:42 HITS.pool.root.1
[2025-10-12 23:43:52] -rw-------. 1 boincer umatlas   1484800 Oct 12 23:43 result.tar.gz
23:43:54 (1136828): run_atlas exited; CPU time 31997.263618
23:43:54 (1136828): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN