Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:07:55 (790269): wrapper (7.7.26015): starting
23:07:55 (790269): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 23:07:55] Arguments: --nthreads 9
[2025-10-12 23:07:55] Threads: 9
[2025-10-12 23:07:55] Checking for CVMFS
[2025-10-12 23:07:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 23:07:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 23:07:56] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 23:07:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 23:07:57] 2.13.2.0 1149533 130125 367664 151645 1 390 22686627 32935937 29989 16776704 0 261997121 99.634 240180274 20628 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 23:07:57] CVMFS is ok
[2025-10-12 23:07:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 23:07:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 23:07:57] Further information can be found at the LHC@home message board.
[2025-10-12 23:07:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 23:07:57] Checking for apptainer binary...
[2025-10-12 23:07:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 23:07:57] Running /usr/bin/apptainer --version
[2025-10-12 23:07:57] apptainer version 1.4.3-1.el9
[2025-10-12 23:07:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 23:07:57] c6-2-11-4.aglt2.org
[2025-10-12 23:07:57] apptainer works
[2025-10-12 23:07:57] Set ATHENA_PROC_NUMBER=9
[2025-10-12 23:07:57] Set ATHENA_CORE_NUMBER=9
[2025-10-12 23:07:57] Starting ATLAS job with PandaID=6840750345
[2025-10-12 23:07:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 01:32:59]  *** The last 200 lines of the pilot log: ***
[2025-10-13 01:32:59] 2025-10-13 05:31:48,914 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 01:32:59] 2025-10-13 05:31:48,921 | INFO     | fitting pss+swap vs Time
[2025-10-13 01:32:59] 2025-10-13 05:31:48,926 | INFO     | sum of square deviations: 850923941.7928559
[2025-10-13 01:32:59] 2025-10-13 05:31:48,927 | INFO     | sum of deviations: 17694984205.400024
[2025-10-13 01:32:59] 2025-10-13 05:31:48,927 | INFO     | mean x: 1760329211.807143
[2025-10-13 01:32:59] 2025-10-13 05:31:48,927 | INFO     | mean y: 2163554.2
[2025-10-13 01:32:59] 2025-10-13 05:31:48,927 | INFO     | -- intersect: -36603925508.94498
[2025-10-13 01:32:59] 2025-10-13 05:31:48,927 | INFO     | intersect: -36603925508.94498
[2025-10-13 01:32:59] 2025-10-13 05:31:49,102 | INFO     | chi2: 2.0491065304990377
[2025-10-13 01:32:59] 2025-10-13 05:31:49,103 | INFO     | sum of square deviations: 762982924.9333344
[2025-10-13 01:32:59] 2025-10-13 05:31:49,104 | INFO     | sum of deviations: 25273000145.733334
[2025-10-13 01:32:59] 2025-10-13 05:31:49,104 | INFO     | mean x: 1760329059.3111112
[2025-10-13 01:32:59] 2025-10-13 05:31:49,104 | INFO     | mean y: 2176311.9111111113
[2025-10-13 01:32:59] 2025-10-13 05:31:49,104 | INFO     | -- intersect: -58306856719.720024
[2025-10-13 01:32:59] 2025-10-13 05:31:49,105 | INFO     | intersect: -58306856719.720024
[2025-10-13 01:32:59] 2025-10-13 05:31:49,105 | INFO     | chi2: 1.364957711453813
[2025-10-13 01:32:59] 2025-10-13 05:31:49,105 | INFO     | current chi2=1.364957711453813 (change=33.387664763266734 %)
[2025-10-13 01:32:59] 2025-10-13 05:31:49,105 | INFO     | sum of square deviations: 681320851.5692307
[2025-10-13 01:32:59] 2025-10-13 05:31:49,106 | INFO     | sum of deviations: 24776931630.36924
[2025-10-13 01:32:59] 2025-10-13 05:31:49,106 | INFO     | mean x: 1760328906.8153846
[2025-10-13 01:32:59] 2025-10-13 05:31:49,106 | INFO     | mean y: 2175390.0153846154
[2025-10-13 01:32:59] 2025-10-13 05:31:49,106 | INFO     | -- intersect: -64013990959.02748
[2025-10-13 01:32:59] 2025-10-13 05:31:49,106 | INFO     | intersect: -64013990959.02748
[2025-10-13 01:32:59] 2025-10-13 05:31:49,107 | INFO     | chi2: 1.360152936395546
[2025-10-13 01:32:59] 2025-10-13 05:31:49,107 | INFO     | current chi2=1.360152936395546 (change=0.35200907822626804 %)
[2025-10-13 01:32:59] 2025-10-13 05:31:49,107 | INFO     | right removable region: 129
[2025-10-13 01:32:59] 2025-10-13 05:31:49,107 | INFO     | sum of square deviations: 762964991.3037033
[2025-10-13 01:32:59] 2025-10-13 05:31:49,108 | INFO     | sum of deviations: -687781935.0148163
[2025-10-13 01:32:59] 2025-10-13 05:31:49,108 | INFO     | mean x: 1760329364.3185184
[2025-10-13 01:32:59] 2025-10-13 05:31:49,108 | INFO     | mean y: 2194966.3259259257
[2025-10-13 01:32:59] 2025-10-13 05:31:49,108 | INFO     | -- intersect: 1589060353.6690469
[2025-10-13 01:32:59] 2025-10-13 05:31:49,108 | INFO     | intersect: 1589060353.6690469
[2025-10-13 01:32:59] 2025-10-13 05:31:49,108 | INFO     | chi2: 0.7413027230362094
[2025-10-13 01:32:59] 2025-10-13 05:31:49,109 | INFO     | current chi2=0.7413027230362094 (change=63.82312427379395 %)
[2025-10-13 01:32:59] 2025-10-13 05:31:49,110 | INFO     | sum of square deviations: 681293706.9307669
[2025-10-13 01:32:59] 2025-10-13 05:31:49,111 | INFO     | sum of deviations: -1081622579.0769243
[2025-10-13 01:32:59] 2025-10-13 05:31:49,111 | INFO     | mean x: 1760329516.823077
[2025-10-13 01:32:59] 2025-10-13 05:31:49,112 | INFO     | mean y: 2195745.6923076925
[2025-10-13 01:32:59] 2025-10-13 05:31:49,112 | INFO     | -- intersect: 2796896669.305709
[2025-10-13 01:32:59] 2025-10-13 05:31:49,112 | INFO     | intersect: 2796896669.305709
[2025-10-13 01:32:59] 2025-10-13 05:31:49,112 | INFO     | chi2: 0.7352545842321977
[2025-10-13 01:32:59] 2025-10-13 05:31:49,112 | INFO     | current chi2=0.7352545842321977 (change=0.8158797500756308 %)
[2025-10-13 01:32:59] 2025-10-13 05:31:49,112 | INFO     | left removable region: 20
[2025-10-13 01:32:59] 2025-10-13 05:31:49,112 | INFO     | sum of square deviations: 401602085.3211002
[2025-10-13 01:32:59] 2025-10-13 05:31:49,113 | INFO     | sum of deviations: 3237272305.0
[2025-10-13 01:32:59] 2025-10-13 05:31:49,113 | INFO     | mean x: 1760329486.3669724
[2025-10-13 01:32:59] 2025-10-13 05:31:49,113 | INFO     | mean y: 2219618.0
[2025-10-13 01:32:59] 2025-10-13 05:31:49,113 | INFO     | -- intersect: -14187611815.107021
[2025-10-13 01:32:59] 2025-10-13 05:31:49,114 | INFO     | intersect: -14187611815.107021
[2025-10-13 01:32:59] 2025-10-13 05:31:49,114 | INFO     | chi2: 0.02142268664253857
[2025-10-13 01:32:59] 2025-10-13 05:31:49,114 | INFO     | -- intersect: -14187611815.107021
[2025-10-13 01:32:59] 2025-10-13 05:31:49,114 | INFO     | current memory leak: 8.06 B/s (using 109 data points, chi2=0.02)
[2025-10-13 01:32:59] 2025-10-13 05:31:49,115 | INFO     | could have reported an average CPU frequency of 2709 MHz (8 samples)
[2025-10-13 01:32:59] 2025-10-13 05:31:49,115 | INFO     | ..............................
[2025-10-13 01:32:59] 2025-10-13 05:31:49,115 | INFO     | . Timing measurements:
[2025-10-13 01:32:59] 2025-10-13 05:31:49,115 | INFO     | . get job = 0 s
[2025-10-13 01:32:59] 2025-10-13 05:31:49,115 | INFO     | . initial setup = 3 s
[2025-10-13 01:32:59] 2025-10-13 05:31:49,115 | INFO     | . payload setup = 12 s
[2025-10-13 01:32:59] 2025-10-13 05:31:49,115 | INFO     | . stage-in = 0 s
[2025-10-13 01:32:59] 2025-10-13 05:31:49,115 | INFO     | . payload execution = 8507 s
[2025-10-13 01:32:59] 2025-10-13 05:31:49,115 | INFO     | . stage-out = 2 s
[2025-10-13 01:32:59] 2025-10-13 05:31:49,115 | INFO     | . log creation = 0 s
[2025-10-13 01:32:59] 2025-10-13 05:31:49,116 | INFO     | ..............................
[2025-10-13 01:32:59] 2025-10-13 05:31:49,442 | INFO     | 
[2025-10-13 01:32:59] 2025-10-13 05:31:49,443 | INFO     | job summary report
[2025-10-13 01:32:59] 2025-10-13 05:31:49,443 | INFO     | --------------------------------------------------
[2025-10-13 01:32:59] 2025-10-13 05:31:49,443 | INFO     | PanDA job id: 6840750345
[2025-10-13 01:32:59] 2025-10-13 05:31:49,443 | INFO     | task id: 46676269
[2025-10-13 01:32:59] 2025-10-13 05:31:49,443 | INFO     | errors: (none)
[2025-10-13 01:32:59] 2025-10-13 05:31:49,443 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 01:32:59] 2025-10-13 05:31:49,443 | INFO     | pilot state: finished 
[2025-10-13 01:32:59] 2025-10-13 05:31:49,443 | INFO     | transexitcode: 0
[2025-10-13 01:32:59] 2025-10-13 05:31:49,443 | INFO     | exeerrorcode: 0
[2025-10-13 01:32:59] 2025-10-13 05:31:49,443 | INFO     | exeerrordiag: 
[2025-10-13 01:32:59] 2025-10-13 05:31:49,443 | INFO     | exitcode: 0
[2025-10-13 01:32:59] 2025-10-13 05:31:49,443 | INFO     | exitmsg: OK
[2025-10-13 01:32:59] 2025-10-13 05:31:49,444 | INFO     | cpuconsumptiontime: 43568 s
[2025-10-13 01:32:59] 2025-10-13 05:31:49,444 | INFO     | nevents: 400
[2025-10-13 01:32:59] 2025-10-13 05:31:49,444 | INFO     | neventsw: 0
[2025-10-13 01:32:59] 2025-10-13 05:31:49,444 | INFO     | pid: 803023
[2025-10-13 01:32:59] 2025-10-13 05:31:49,444 | INFO     | pgrp: 803023
[2025-10-13 01:32:59] 2025-10-13 05:31:49,444 | INFO     | corecount: 9
[2025-10-13 01:32:59] 2025-10-13 05:31:49,444 | INFO     | event service: False
[2025-10-13 01:32:59] 2025-10-13 05:31:49,444 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 19: 2349175, 23: 2349203, 8524: 2377196, 8525: 2377323, 8527: 2386377, 8530: 2386433, 8560: 2386627}
[2025-10-13 01:32:59] 2025-10-13 05:31:49,444 | INFO     | --------------------------------------------------
[2025-10-13 01:32:59] 2025-10-13 05:31:49,444 | INFO     | 
[2025-10-13 01:32:59] 2025-10-13 05:31:49,444 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-13 01:32:59] 2025-10-13 05:31:49,562 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 01:32:59] 2025-10-13 05:31:49,562 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 01:32:59] 2025-10-13 05:31:49,562 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 01:32:59] 2025-10-13 05:31:49,563 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 01:32:59] 2025-10-13 05:31:49,563 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 01:32:59] 2025-10-13 05:31:49,563 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 01:32:59] 2025-10-13 05:31:49,563 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 01:32:59] 2025-10-13 05:31:49,563 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 01:32:59] 2025-10-13 05:31:49,563 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 01:32:59] 2025-10-13 05:31:49,563 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 01:32:59] 2025-10-13 05:31:49,563 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 01:32:59] 2025-10-13 05:31:49,563 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 01:32:59] 2025-10-13 05:31:49,563 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 01:32:59] 2025-10-13 05:31:49,563 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 01:32:59] 2025-10-13 05:31:49,563 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 01:32:59] 2025-10-13 05:31:49,563 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 01:32:59] 2025-10-13 05:31:49,563 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 01:32:59] 2025-10-13 05:31:49,564 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 01:32:59] 2025-10-13 05:31:49,564 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 01:32:59] 2025-10-13 05:31:49,564 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 01:32:59] 2025-10-13 05:31:49,564 | INFO     | job 6840750345 has completed (purged errors)
[2025-10-13 01:32:59] 2025-10-13 05:31:49,564 | INFO     | overall cleanup function is called
[2025-10-13 01:32:59] 2025-10-13 05:31:49,874 | INFO     | PID=795857 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 01:32:59] 2025-10-13 05:31:49,875 | INFO     | .. there are 45 such processes running
[2025-10-13 01:32:59] 2025-10-13 05:31:50,576 | INFO     | --- collectZombieJob: --- 10, [803023]
[2025-10-13 01:32:59] 2025-10-13 05:31:50,576 | INFO     | zombie collector waiting for pid 803023
[2025-10-13 01:32:59] 2025-10-13 05:31:50,576 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 01:32:59] 2025-10-13 05:31:50,576 | INFO     | collected zombie processes
[2025-10-13 01:32:59] 2025-10-13 05:31:50,576 | INFO     | will attempt to kill all subprocesses of pid=803023
[2025-10-13 01:32:59] 2025-10-13 05:31:51,799 | INFO     | process IDs to be killed: [803023] (in reverse order)
[2025-10-13 01:32:59] 2025-10-13 05:31:52,052 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 01:32:59] 2025-10-13 05:31:52,052 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 01:32:59] 2025-10-13 05:31:52,073 | INFO     | did not find any defunct processes belonging to 803023
[2025-10-13 01:32:59] 2025-10-13 05:31:52,097 | INFO     | did not find any defunct processes belonging to 803023
[2025-10-13 01:32:59] 2025-10-13 05:31:52,097 | INFO     | ready for new job
[2025-10-13 01:32:59] 2025-10-13 05:31:52,097 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 01:32:59] 2025-10-13 05:31:52,112 | INFO     | ***************************************
[2025-10-13 01:32:59] 2025-10-13 05:31:52,112 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 01:32:59] 2025-10-13 05:31:52,112 | INFO     | ***************************************
[2025-10-13 01:32:59] 2025-10-13 05:31:52,113 | INFO     | 
[2025-10-13 01:32:59] 2025-10-13 05:31:52,123 | INFO     | architecture information:
[2025-10-13 01:32:59] 2025-10-13 05:31:52,126 | INFO     | executing command: cat /etc/os-release
[2025-10-13 01:32:59] 2025-10-13 05:31:52,184 | INFO     | cat /etc/os-release:
[2025-10-13 01:32:59] NAME="CentOS Linux"
[2025-10-13 01:32:59] VERSION="7 (Core)"
[2025-10-13 01:32:59] ID="centos"
[2025-10-13 01:32:59] ID_LIKE="rhel fedora"
[2025-10-13 01:32:59] VERSION_ID="7"
[2025-10-13 01:32:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 01:32:59] ANSI_COLOR="0;31"
[2025-10-13 01:32:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 01:32:59] HOME_URL="https://www.centos.org/"
[2025-10-13 01:32:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 01:32:59] 
[2025-10-13 01:32:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 01:32:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 01:32:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 01:32:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 01:32:59] 
[2025-10-13 01:32:59] 2025-10-13 05:31:52,184 | INFO     | ***************************************
[2025-10-13 01:32:59] 2025-10-13 05:31:52,688 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-13 01:32:59] 2025-10-13 05:31:52,753 | INFO     | sufficient remaining disk space (91580530688 B)
[2025-10-13 01:32:59] 2025-10-13 05:31:52,753 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 01:32:59] 2025-10-13 05:31:52,753 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 01:32:59] 2025-10-13 05:31:52,753 | INFO     | update_server=False
[2025-10-13 01:32:59] 2025-10-13 05:31:52,754 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 01:32:59] 2025-10-13 05:31:53,043 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 01:32:59] 2025-10-13 05:31:53,083 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 01:32:59] 2025-10-13 05:31:53,319 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:32:59] 2025-10-13 05:31:53,323 | INFO     | aborting loop
[2025-10-13 01:32:59] 2025-10-13 05:31:53,667 | INFO     | all payload control threads have been joined
[2025-10-13 01:32:59] 2025-10-13 05:31:53,681 | INFO     | all job control threads have been joined
[2025-10-13 01:32:59] 2025-10-13 05:31:53,781 | INFO     | [job] retrieve thread has finished
[2025-10-13 01:32:59] 2025-10-13 05:31:53,868 | INFO     | all data control threads have been joined
[2025-10-13 01:32:59] 2025-10-13 05:31:53,899 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 01:32:59] 2025-10-13 05:31:53,900 | INFO     | [job] validate thread has finished
[2025-10-13 01:32:59] 2025-10-13 05:31:54,151 | INFO     | [payload] failed_post thread has finished
[2025-10-13 01:32:59] 2025-10-13 05:31:54,330 | INFO     | [job] job monitor thread has finished
[2025-10-13 01:32:59] 2025-10-13 05:31:54,464 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:32:59] 2025-10-13 05:31:54,674 | INFO     | [payload] control thread has finished
[2025-10-13 01:32:59] 2025-10-13 05:31:54,687 | INFO     | [job] control thread has finished
[2025-10-13 01:32:59] 2025-10-13 05:31:54,874 | INFO     | [data] control thread has finished
[2025-10-13 01:32:59] 2025-10-13 05:31:55,092 | INFO     | [data] copytool_out thread has finished
[2025-10-13 01:32:59] 2025-10-13 05:31:55,170 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 01:32:59] 2025-10-13 05:31:55,170 | INFO     | [data] copytool_in thread has finished
[2025-10-13 01:32:59] 2025-10-13 05:31:55,176 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 01:32:59] 2025-10-13 05:31:55,178 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 01:32:59] 2025-10-13 05:31:55,249 | INFO     | [payload] validate_post thread has finished
[2025-10-13 01:32:59] 2025-10-13 05:31:55,470 | INFO     | [job] queue monitor thread has finished
[2025-10-13 01:32:59] 2025-10-13 05:31:57,084 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 01:32:59] 2025-10-13 05:32:27,935 | INFO     | PID=795857 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 01:32:59] 2025-10-13 05:32:27,935 | INFO     | .. there are 45 such processes running
[2025-10-13 01:32:59] 2025-10-13 05:32:27,936 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 01:32:59] 2025-10-13 05:32:27,937 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 01:32:59] 2025-10-13 05:32:27,937 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 01:32:59] 2025-10-13 05:32:51,359 | INFO     | [monitor] cgroup control has ended
[2025-10-13 01:32:59] 2025-10-13 05:32:52,624 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140348059379520)>', '<ExcThread(monitor, started 140347560675072)>']
[2025-10-13 01:32:59] 2025-10-13 05:32:53,162 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 01:32:59] 2025-10-13 05:32:53,162 | INFO     | [monitor] control thread has ended
[2025-10-13 01:32:59] 2025-10-13 05:32:57,650 | INFO     | all workflow threads have been joined
[2025-10-13 01:32:59] 2025-10-13 05:32:57,650 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 01:32:59] 2025-10-13 05:32:57,650 | INFO     | traces error code: 0
[2025-10-13 01:32:59] 2025-10-13 05:32:57,651 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 01:32:59] 2025-10-13 05:32:58,293 [wrapper] ==== pilot stdout END ====
[2025-10-13 01:32:59] 2025-10-13 05:32:58,308 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 01:32:59] 2025-10-13 05:32:58,327 [wrapper] pilotpid: 795857
[2025-10-13 01:32:59] 2025-10-13 05:32:58,345 [wrapper] Pilot exit status: 0
[2025-10-13 01:32:59] 2025-10-13 05:32:58,455 [wrapper] pandaids: 6840750345
[2025-10-13 01:32:59] 2025-10-13 05:32:58,898 [wrapper] cleanup supervisor_pilot 1347525 795858
[2025-10-13 01:32:59] 2025-10-13 05:32:58,916 [wrapper] Test setup, not cleaning
[2025-10-13 01:32:59] 2025-10-13 05:32:58,931 [wrapper] apfmon messages muted
[2025-10-13 01:32:59] 2025-10-13 05:32:58,959 [wrapper] ==== wrapper stdout END ====
[2025-10-13 01:32:59] 2025-10-13 05:32:58,992 [wrapper] ==== wrapper stderr END ====
[2025-10-13 01:32:59]  *** Error codes and diagnostics ***
[2025-10-13 01:32:59]     "exeErrorCode": 0,
[2025-10-13 01:32:59]     "exeErrorDiag": "",
[2025-10-13 01:32:59]     "pilotErrorCode": 0,
[2025-10-13 01:32:59]     "pilotErrorDiag": "",
[2025-10-13 01:32:59]  *** Listing of results directory ***
[2025-10-13 01:32:59] total 417264
[2025-10-13 01:32:59] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 17:12 pilot3.tar.gz
[2025-10-13 01:32:59] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 17:17 queuedata.json
[2025-10-13 01:32:59] -rwx------. 1 boincer umatlas     36292 Oct 12 17:18 runpilot2-wrapper.sh
[2025-10-13 01:32:59] -rw-r--r--. 1 boincer umatlas       100 Oct 12 23:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 01:32:59] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 23:07 run_atlas
[2025-10-13 01:32:59] -rw-r--r--. 1 boincer umatlas       105 Oct 12 23:07 job.xml
[2025-10-13 01:32:59] -rw-r--r--. 2 boincer umatlas 223524332 Oct 12 23:07 EVNT.46676267._004778.pool.root.1
[2025-10-13 01:32:59] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 23:07 input.tar.gz
[2025-10-13 01:32:59] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 23:07 start_atlas.sh
[2025-10-13 01:32:59] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 23:07 shared
[2025-10-13 01:32:59] -rw-r--r--. 1 boincer umatlas         0 Oct 12 23:07 boinc_lockfile
[2025-10-13 01:32:59] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 23:07 pandaJob.out
[2025-10-13 01:32:59] -rw-------. 1 boincer umatlas    974373 Oct 12 23:08 agis_schedconf.cvmfs.json
[2025-10-13 01:32:59] -rw-------. 1 boincer umatlas   1560580 Oct 12 23:08 agis_ddmendpoints.agis.ALL.json
[2025-10-13 01:32:59] drwx------. 5 boincer umatlas      4096 Oct 12 23:08 pilot3
[2025-10-13 01:32:59] -rw-r--r--. 1 boincer umatlas      6857 Oct 13 01:28 init_data.xml
[2025-10-13 01:32:59] -rw-------. 1 boincer umatlas 196845404 Oct 13 01:30 HITS.46676269._089717.pool.root.1
[2025-10-13 01:32:59] -rw-r--r--. 1 boincer umatlas       529 Oct 13 01:30 boinc_task_state.xml
[2025-10-13 01:32:59] -rw-------. 1 boincer umatlas      1042 Oct 13 01:31 memory_monitor_summary.json
[2025-10-13 01:32:59] -rw-------. 1 boincer umatlas    404260 Oct 13 01:31 log.46676269._089717.job.log.tgz.1
[2025-10-13 01:32:59] -rw-------. 1 boincer umatlas      7824 Oct 13 01:31 heartbeat.json
[2025-10-13 01:32:59] -rw-------. 1 boincer umatlas        95 Oct 13 01:32 pilot_heartbeat.json
[2025-10-13 01:32:59] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 01:32 boinc_mmap_file
[2025-10-13 01:32:59] -rw-r--r--. 1 boincer umatlas        27 Oct 13 01:32 wrapper_checkpoint.txt
[2025-10-13 01:32:59] -rw-------. 1 boincer umatlas      4823 Oct 13 01:32 pilotlog.txt
[2025-10-13 01:32:59] -rw-------. 1 boincer umatlas   1098788 Oct 13 01:32 log.46676269._089717.job.log.1
[2025-10-13 01:32:59] -rw-------. 1 boincer umatlas       357 Oct 13 01:32 output.list
[2025-10-13 01:32:59] -rw-r--r--. 1 boincer umatlas       620 Oct 13 01:32 runtime_log
[2025-10-13 01:32:59] -rw-------. 1 boincer umatlas   1525760 Oct 13 01:32 result.tar.gz
[2025-10-13 01:32:59] -rw-r--r--. 1 boincer umatlas      8708 Oct 13 01:32 runtime_log.err
[2025-10-13 01:32:59] -rw-------. 1 boincer umatlas       654 Oct 13 01:32 KNwLDmndIS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0clNDm6laERm.diag
[2025-10-13 01:32:59] -rw-r--r--. 1 boincer umatlas     21103 Oct 13 01:32 stderr.txt
[2025-10-13 01:32:59] HITS file was successfully produced:
[2025-10-13 01:32:59] -rw-------. 1 boincer umatlas 196845404 Oct 13 01:30 shared/HITS.pool.root.1
[2025-10-13 01:32:59]  *** Contents of shared directory: ***
[2025-10-13 01:32:59] total 412592
[2025-10-13 01:32:59] -rw-r--r--. 2 boincer umatlas 223524332 Oct 12 23:07 ATLAS.root_0
[2025-10-13 01:32:59] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 23:07 input.tar.gz
[2025-10-13 01:32:59] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 23:07 start_atlas.sh
[2025-10-13 01:32:59] -rw-------. 1 boincer umatlas 196845404 Oct 13 01:30 HITS.pool.root.1
[2025-10-13 01:32:59] -rw-------. 1 boincer umatlas   1525760 Oct 13 01:32 result.tar.gz
01:33:00 (790269): run_atlas exited; CPU time 43958.461321
01:33:00 (790269): called boinc_finish(0)

</stderr_txt>
]]>

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