Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:10:01 (27462): wrapper (7.7.26015): starting
12:10:01 (27462): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 12:10:01] Arguments: --nthreads 8
[2025-10-13 12:10:01] Threads: 8
[2025-10-13 12:10:01] Checking for CVMFS
[2025-10-13 12:10:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 12:10:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 12:10:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 12:10:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 12:10:03] 2.11.2.0 3881 159087 139340 151657 0 60 15993203 25165824 4632 130560 0 98953767 99.929 28479744 3095 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 12:10:03] CVMFS is ok
[2025-10-13 12:10:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 12:10:03] Checking for apptainer binary...
[2025-10-13 12:10:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 12:10:03] Running /usr/bin/apptainer --version
[2025-10-13 12:10:03] apptainer version 1.3.2-1.el7
[2025-10-13 12:10:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 12:10:20] cg-vwn428.simple-grid.lan
[2025-10-13 12:10:20] apptainer works
[2025-10-13 12:10:20] Set ATHENA_PROC_NUMBER=8
[2025-10-13 12:10:20] Set ATHENA_CORE_NUMBER=8
[2025-10-13 12:10:20] Starting ATLAS job with PandaID=6840750061
[2025-10-13 12:10:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 16:30:40]  *** The last 200 lines of the pilot log: ***
[2025-10-13 16:30:40] 2025-10-13 14:29:31,481 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 16:30:40] 2025-10-13 14:29:31,486 | INFO     | fitting pss+swap vs Time
[2025-10-13 16:30:40] 2025-10-13 14:29:31,487 | INFO     | sum of square deviations: 4394577280.5
[2025-10-13 16:30:40] 2025-10-13 14:29:31,497 | INFO     | sum of deviations: 67290200043.49998
[2025-10-13 16:30:40] 2025-10-13 14:29:31,497 | INFO     | mean x: 1760358254.5
[2025-10-13 16:30:40] 2025-10-13 14:29:31,497 | INFO     | mean y: 2460072.243801653
[2025-10-13 16:30:40] 2025-10-13 14:29:31,498 | INFO     | -- intersect: -26952318859.3157
[2025-10-13 16:30:40] 2025-10-13 14:29:31,498 | INFO     | intersect: -26952318859.3157
[2025-10-13 16:30:40] 2025-10-13 14:29:31,498 | INFO     | chi2: 7.0528569929878975
[2025-10-13 16:30:40] 2025-10-13 14:29:31,499 | INFO     | sum of square deviations: 4127772278.0
[2025-10-13 16:30:40] 2025-10-13 14:29:31,501 | INFO     | sum of deviations: 82461736872.00002
[2025-10-13 16:30:40] 2025-10-13 14:29:31,501 | INFO     | mean x: 1760358102.0
[2025-10-13 16:30:40] 2025-10-13 14:29:31,501 | INFO     | mean y: 2468586.3037974685
[2025-10-13 16:30:40] 2025-10-13 14:29:31,501 | INFO     | -- intersect: -35164729803.32049
[2025-10-13 16:30:40] 2025-10-13 14:29:31,501 | INFO     | intersect: -35164729803.32049
[2025-10-13 16:30:40] 2025-10-13 14:29:31,502 | INFO     | chi2: 6.304815126463638
[2025-10-13 16:30:40] 2025-10-13 14:29:31,502 | INFO     | current chi2=6.304815126463638 (change=10.60622478618209 %)
[2025-10-13 16:30:40] 2025-10-13 14:29:31,502 | INFO     | right removable region: 236
[2025-10-13 16:30:40] 2025-10-13 14:29:31,502 | INFO     | sum of square deviations: 4127772278.0
[2025-10-13 16:30:40] 2025-10-13 14:29:31,504 | INFO     | sum of deviations: -14014282191.0
[2025-10-13 16:30:40] 2025-10-13 14:29:31,504 | INFO     | mean x: 1760358407.0
[2025-10-13 16:30:40] 2025-10-13 14:29:31,504 | INFO     | mean y: 2506502.109704641
[2025-10-13 16:30:40] 2025-10-13 14:29:31,504 | INFO     | -- intersect: 5979134526.015735
[2025-10-13 16:30:40] 2025-10-13 14:29:31,505 | INFO     | intersect: 5979134526.015735
[2025-10-13 16:30:40] 2025-10-13 14:29:31,505 | INFO     | chi2: 2.5363912972757947
[2025-10-13 16:30:40] 2025-10-13 14:29:31,505 | INFO     | current chi2=2.5363912972757947 (change=64.03739222562531 %)
[2025-10-13 16:30:40] 2025-10-13 14:29:31,506 | INFO     | sum of square deviations: 3871990738.0
[2025-10-13 16:30:40] 2025-10-13 14:29:31,507 | INFO     | sum of deviations: -56729551741.5
[2025-10-13 16:30:40] 2025-10-13 14:29:31,508 | INFO     | mean x: 1760358559.5
[2025-10-13 16:30:40] 2025-10-13 14:29:31,508 | INFO     | mean y: 2531823.0646551726
[2025-10-13 16:30:40] 2025-10-13 14:29:31,508 | INFO     | -- intersect: 25794006736.646343
[2025-10-13 16:30:40] 2025-10-13 14:29:31,508 | INFO     | intersect: 25794006736.646343
[2025-10-13 16:30:40] 2025-10-13 14:29:31,508 | INFO     | chi2: 1.0490256726179021
[2025-10-13 16:30:40] 2025-10-13 14:29:31,508 | INFO     | current chi2=1.0490256726179021 (change=58.64101592902461 %)
[2025-10-13 16:30:40] 2025-10-13 14:29:31,509 | INFO     | sum of square deviations: 3627000098.0
[2025-10-13 16:30:40] 2025-10-13 14:29:31,510 | INFO     | sum of deviations: -57609604383.999985
[2025-10-13 16:30:40] 2025-10-13 14:29:31,511 | INFO     | mean x: 1760358712.0
[2025-10-13 16:30:40] 2025-10-13 14:29:31,511 | INFO     | mean y: 2532330.40969163
[2025-10-13 16:30:40] 2025-10-13 14:29:31,511 | INFO     | -- intersect: 27963261922.93692
[2025-10-13 16:30:40] 2025-10-13 14:29:31,511 | INFO     | intersect: 27963261922.93692
[2025-10-13 16:30:40] 2025-10-13 14:29:31,511 | INFO     | chi2: 1.0211182783108619
[2025-10-13 16:30:40] 2025-10-13 14:29:31,511 | INFO     | current chi2=1.0211182783108619 (change=2.6603156658116665 %)
[2025-10-13 16:30:40] 2025-10-13 14:29:31,511 | INFO     | left removable region: 30
[2025-10-13 16:30:40] 2025-10-13 14:29:31,518 | INFO     | sum of square deviations: 2710627567.5
[2025-10-13 16:30:40] 2025-10-13 14:29:31,520 | INFO     | sum of deviations: -19249520662.50003
[2025-10-13 16:30:40] 2025-10-13 14:29:31,520 | INFO     | mean x: 1760358986.5
[2025-10-13 16:30:40] 2025-10-13 14:29:31,520 | INFO     | mean y: 2527727.4708737866
[2025-10-13 16:30:40] 2025-10-13 14:29:31,520 | INFO     | -- intersect: 12503716415.410889
[2025-10-13 16:30:40] 2025-10-13 14:29:31,520 | INFO     | intersect: 12503716415.410889
[2025-10-13 16:30:40] 2025-10-13 14:29:31,520 | INFO     | chi2: 0.13567452634109134
[2025-10-13 16:30:40] 2025-10-13 14:29:31,521 | INFO     | -- intersect: 12503716415.410889
[2025-10-13 16:30:40] 2025-10-13 14:29:31,521 | INFO     | current memory leak: -7.10 B/s (using 206 data points, chi2=0.14)
[2025-10-13 16:30:40] 2025-10-13 14:29:31,521 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 16:30:40] 2025-10-13 14:29:31,522 | INFO     | ..............................
[2025-10-13 16:30:40] 2025-10-13 14:29:31,522 | INFO     | . Timing measurements:
[2025-10-13 16:30:40] 2025-10-13 14:29:31,522 | INFO     | . get job = 0 s
[2025-10-13 16:30:40] 2025-10-13 14:29:31,522 | INFO     | . initial setup = 9 s
[2025-10-13 16:30:40] 2025-10-13 14:29:31,522 | INFO     | . payload setup = 119 s
[2025-10-13 16:30:40] 2025-10-13 14:29:31,522 | INFO     | . stage-in = 0 s
[2025-10-13 16:30:40] 2025-10-13 14:29:31,522 | INFO     | . payload execution = 14916 s
[2025-10-13 16:30:40] 2025-10-13 14:29:31,522 | INFO     | . stage-out = 3 s
[2025-10-13 16:30:40] 2025-10-13 14:29:31,522 | INFO     | . log creation = 1 s
[2025-10-13 16:30:40] 2025-10-13 14:29:31,522 | INFO     | ..............................
[2025-10-13 16:30:40] 2025-10-13 14:29:31,652 | INFO     | 
[2025-10-13 16:30:40] 2025-10-13 14:29:31,652 | INFO     | job summary report
[2025-10-13 16:30:40] 2025-10-13 14:29:31,652 | INFO     | --------------------------------------------------
[2025-10-13 16:30:40] 2025-10-13 14:29:31,652 | INFO     | PanDA job id: 6840750061
[2025-10-13 16:30:40] 2025-10-13 14:29:31,652 | INFO     | task id: 46676269
[2025-10-13 16:30:40] 2025-10-13 14:29:31,652 | INFO     | errors: (none)
[2025-10-13 16:30:40] 2025-10-13 14:29:31,653 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 16:30:40] 2025-10-13 14:29:31,653 | INFO     | pilot state: finished 
[2025-10-13 16:30:40] 2025-10-13 14:29:31,653 | INFO     | transexitcode: 0
[2025-10-13 16:30:40] 2025-10-13 14:29:31,653 | INFO     | exeerrorcode: 0
[2025-10-13 16:30:40] 2025-10-13 14:29:31,653 | INFO     | exeerrordiag: 
[2025-10-13 16:30:40] 2025-10-13 14:29:31,653 | INFO     | exitcode: 0
[2025-10-13 16:30:40] 2025-10-13 14:29:31,653 | INFO     | exitmsg: OK
[2025-10-13 16:30:40] 2025-10-13 14:29:31,653 | INFO     | cpuconsumptiontime: 55810 s
[2025-10-13 16:30:40] 2025-10-13 14:29:31,653 | INFO     | nevents: 400
[2025-10-13 16:30:40] 2025-10-13 14:29:31,654 | INFO     | neventsw: 0
[2025-10-13 16:30:40] 2025-10-13 14:29:31,654 | INFO     | pid: 5391
[2025-10-13 16:30:40] 2025-10-13 14:29:31,654 | INFO     | pgrp: 5391
[2025-10-13 16:30:40] 2025-10-13 14:29:31,654 | INFO     | corecount: 8
[2025-10-13 16:30:40] 2025-10-13 14:29:31,654 | INFO     | event service: False
[2025-10-13 16:30:40] 2025-10-13 14:29:31,654 | INFO     | sizes: {0: 2348630, 1: 2348885, 12: 2348885, 23: 2348913, 34: 2348941, 44: 2348969, 55: 2349125, 66: 2349153, 77: 2349181, 87: 2349237, 91: 2349527, 98: 2349835, 1
[2025-10-13 16:30:40] 2025-10-13 14:29:31,654 | INFO     | --------------------------------------------------
[2025-10-13 16:30:40] 2025-10-13 14:29:31,654 | INFO     | 
[2025-10-13 16:30:40] 2025-10-13 14:29:31,654 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-10-13 16:30:40] 2025-10-13 14:29:31,892 | INFO     | time since job start (15327s) is within the limit (172800.0s)
[2025-10-13 16:30:40] 2025-10-13 14:29:32,175 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 16:30:40] 2025-10-13 14:29:32,175 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 16:30:40] 2025-10-13 14:29:32,176 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 16:30:40] 2025-10-13 14:29:32,176 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 16:30:40] 2025-10-13 14:29:32,176 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 16:30:40] 2025-10-13 14:29:32,176 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 16:30:40] 2025-10-13 14:29:32,176 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 16:30:40] 2025-10-13 14:29:32,176 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 16:30:40] 2025-10-13 14:29:32,176 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 16:30:40] 2025-10-13 14:29:32,176 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 16:30:40] 2025-10-13 14:29:32,176 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 16:30:40] 2025-10-13 14:29:32,177 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 16:30:40] 2025-10-13 14:29:32,177 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 16:30:40] 2025-10-13 14:29:32,177 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 16:30:40] 2025-10-13 14:29:32,177 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 16:30:40] 2025-10-13 14:29:32,177 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 16:30:40] 2025-10-13 14:29:32,177 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 16:30:40] 2025-10-13 14:29:32,177 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 16:30:40] 2025-10-13 14:29:32,177 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 16:30:40] 2025-10-13 14:29:32,177 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 16:30:40] 2025-10-13 14:29:32,178 | INFO     | job 6840750061 has completed (purged errors)
[2025-10-13 16:30:40] 2025-10-13 14:29:32,178 | INFO     | overall cleanup function is called
[2025-10-13 16:30:40] 2025-10-13 14:29:33,187 | INFO     | --- collectZombieJob: --- 10, [5391]
[2025-10-13 16:30:40] 2025-10-13 14:29:33,187 | INFO     | zombie collector waiting for pid 5391
[2025-10-13 16:30:40] 2025-10-13 14:29:33,187 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 16:30:40] 2025-10-13 14:29:33,187 | INFO     | collected zombie processes
[2025-10-13 16:30:40] 2025-10-13 14:29:33,187 | INFO     | will attempt to kill all subprocesses of pid=5391
[2025-10-13 16:30:40] 2025-10-13 14:29:33,335 | INFO     | process IDs to be killed: [5391] (in reverse order)
[2025-10-13 16:30:40] 2025-10-13 14:29:33,859 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 16:30:40] 2025-10-13 14:29:33,859 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 16:30:40] 2025-10-13 14:29:33,862 | INFO     | did not find any defunct processes belonging to 5391
[2025-10-13 16:30:40] 2025-10-13 14:29:33,865 | INFO     | did not find any defunct processes belonging to 5391
[2025-10-13 16:30:40] 2025-10-13 14:29:33,866 | INFO     | ready for new job
[2025-10-13 16:30:40] 2025-10-13 14:29:33,866 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 16:30:40] 2025-10-13 14:29:33,868 | INFO     | ***************************************
[2025-10-13 16:30:40] 2025-10-13 14:29:33,868 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 16:30:40] 2025-10-13 14:29:33,868 | INFO     | ***************************************
[2025-10-13 16:30:40] 2025-10-13 14:29:33,868 | INFO     | 
[2025-10-13 16:30:40] 2025-10-13 14:29:33,869 | INFO     | pilot is running in a VM
[2025-10-13 16:30:40] 2025-10-13 14:29:33,869 | INFO     | architecture information:
[2025-10-13 16:30:40] 2025-10-13 14:29:33,881 | INFO     | executing command: cat /etc/os-release
[2025-10-13 16:30:40] 2025-10-13 14:29:33,968 | INFO     | cat /etc/os-release:
[2025-10-13 16:30:40] NAME="CentOS Linux"
[2025-10-13 16:30:40] VERSION="7 (Core)"
[2025-10-13 16:30:40] ID="centos"
[2025-10-13 16:30:40] ID_LIKE="rhel fedora"
[2025-10-13 16:30:40] VERSION_ID="7"
[2025-10-13 16:30:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 16:30:40] ANSI_COLOR="0;31"
[2025-10-13 16:30:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 16:30:40] HOME_URL="https://www.centos.org/"
[2025-10-13 16:30:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 16:30:40] 
[2025-10-13 16:30:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 16:30:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 16:30:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 16:30:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 16:30:40] 
[2025-10-13 16:30:40] 2025-10-13 14:29:33,968 | INFO     | ***************************************
[2025-10-13 16:30:40] 2025-10-13 14:29:34,472 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-10-13 16:30:40] 2025-10-13 14:29:34,640 | INFO     | sufficient remaining disk space (495361982464 B)
[2025-10-13 16:30:40] 2025-10-13 14:29:34,641 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 16:30:40] 2025-10-13 14:29:34,641 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 16:30:40] 2025-10-13 14:29:34,641 | INFO     | update_server=False
[2025-10-13 16:30:40] 2025-10-13 14:29:34,641 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 16:30:40] 2025-10-13 14:29:34,642 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 16:30:40] 2025-10-13 14:29:34,651 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:30:40] 2025-10-13 14:29:34,651 | INFO     | aborting loop
[2025-10-13 16:30:40] 2025-10-13 14:29:34,995 | INFO     | all data control threads have been joined
[2025-10-13 16:30:40] 2025-10-13 14:29:35,084 | INFO     | all job control threads have been joined
[2025-10-13 16:30:40] 2025-10-13 14:29:35,344 | INFO     | all payload control threads have been joined
[2025-10-13 16:30:40] 2025-10-13 14:29:35,648 | INFO     | [job] retrieve thread has finished
[2025-10-13 16:30:40] 2025-10-13 14:29:35,657 | INFO     | [job] job monitor thread has finished
[2025-10-13 16:30:40] 2025-10-13 14:29:35,901 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 16:30:40] 2025-10-13 14:29:36,001 | INFO     | [data] control thread has finished
[2025-10-13 16:30:40] 2025-10-13 14:29:36,063 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 16:30:40] 2025-10-13 14:29:36,088 | INFO     | [payload] validate_post thread has finished
[2025-10-13 16:30:40] 2025-10-13 14:29:36,090 | INFO     | [job] control thread has finished
[2025-10-13 16:30:40] 2025-10-13 14:29:36,127 | INFO     | [payload] failed_post thread has finished
[2025-10-13 16:30:40] 2025-10-13 14:29:36,186 | INFO     | [job] validate thread has finished
[2025-10-13 16:30:40] 2025-10-13 14:29:36,318 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 16:30:40] 2025-10-13 14:29:36,349 | INFO     | [payload] control thread has finished
[2025-10-13 16:30:40] 2025-10-13 14:29:36,596 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 16:30:40] 2025-10-13 14:29:36,649 | INFO     | [data] copytool_out thread has finished
[2025-10-13 16:30:40] 2025-10-13 14:29:36,661 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:30:40] 2025-10-13 14:29:36,836 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 16:30:40] 2025-10-13 14:29:36,850 | INFO     | [data] copytool_in thread has finished
[2025-10-13 16:30:40] 2025-10-13 14:29:37,666 | INFO     | [job] queue monitor thread has finished
[2025-10-13 16:30:40] 2025-10-13 14:29:40,072 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 16:30:40] 2025-10-13 14:30:05,067 | INFO     | PID=31231 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 16:30:40] 2025-10-13 14:30:05,067 | INFO     | .. there are 9 such processes running
[2025-10-13 16:30:40] 2025-10-13 14:30:05,069 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 16:30:40] 2025-10-13 14:30:05,069 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 16:30:40] 2025-10-13 14:30:05,069 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 16:30:40] 2025-10-13 14:30:30,108 | INFO     | [monitor] cgroup control has ended
[2025-10-13 16:30:40] 2025-10-13 14:30:31,052 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140345618683712)>', '<ExcThread(monitor, started 140344968607488)>']
[2025-10-13 16:30:40] 2025-10-13 14:30:31,226 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 16:30:40] 2025-10-13 14:30:31,226 | INFO     | [monitor] control thread has ended
[2025-10-13 16:30:40] 2025-10-13 14:30:36,078 | INFO     | all workflow threads have been joined
[2025-10-13 16:30:40] 2025-10-13 14:30:36,078 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 16:30:40] 2025-10-13 14:30:36,078 | INFO     | traces error code: 0
[2025-10-13 16:30:40] 2025-10-13 14:30:36,079 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 16:30:40] 2025-10-13 14:30:36,437 [wrapper] ==== pilot stdout END ====
[2025-10-13 16:30:40] 2025-10-13 14:30:36,522 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 16:30:40] 2025-10-13 14:30:36,631 [wrapper] pilotpid: 31231
[2025-10-13 16:30:40] 2025-10-13 14:30:36,721 [wrapper] Pilot exit status: 0
[2025-10-13 16:30:40] 2025-10-13 14:30:37,195 [wrapper] pandaids: 6840750061
[2025-10-13 16:30:40] 2025-10-13 14:30:38,105 [wrapper] cleanup supervisor_pilot  1619 31232
[2025-10-13 16:30:40] 2025-10-13 14:30:38,166 [wrapper] Test setup, not cleaning
[2025-10-13 16:30:40] 2025-10-13 14:30:38,218 [wrapper] apfmon messages muted
[2025-10-13 16:30:40] 2025-10-13 14:30:38,306 [wrapper] ==== wrapper stdout END ====
[2025-10-13 16:30:40] 2025-10-13 14:30:38,399 [wrapper] ==== wrapper stderr END ====
[2025-10-13 16:30:40]  *** Error codes and diagnostics ***
[2025-10-13 16:30:40]     "exeErrorCode": 0,
[2025-10-13 16:30:40]     "exeErrorDiag": "",
[2025-10-13 16:30:40]     "pilotErrorCode": 0,
[2025-10-13 16:30:40]     "pilotErrorDiag": "",
[2025-10-13 16:30:40]  *** Listing of results directory ***
[2025-10-13 16:30:40] total 416900
[2025-10-13 16:30:40] -rw-r--r--. 1 boinc boinc    557409 Oct 12 22:55 pilot3.tar.gz
[2025-10-13 16:30:40] -rw-r--r--. 1 boinc boinc      5112 Oct 12 23:03 queuedata.json
[2025-10-13 16:30:40] -rwx------. 1 boinc boinc     36292 Oct 12 23:04 runpilot2-wrapper.sh
[2025-10-13 16:30:40] -rw-r--r--. 1 boinc boinc       100 Oct 13 12:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 16:30:40] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 12:10 run_atlas
[2025-10-13 16:30:40] -rw-r--r--. 1 boinc boinc       105 Oct 13 12:10 job.xml
[2025-10-13 16:30:40] -rw-r--r--. 1 boinc boinc      6390 Oct 13 12:10 init_data.xml
[2025-10-13 16:30:40] -rw-r--r--. 2 boinc boinc 219364093 Oct 13 12:10 EVNT.46676267._004767.pool.root.1
[2025-10-13 16:30:40] -rw-r--r--. 2 boinc boinc     15120 Oct 13 12:10 start_atlas.sh
[2025-10-13 16:30:40] drwxrwx--x. 2 boinc boinc        68 Oct 13 12:10 shared
[2025-10-13 16:30:40] -rw-r--r--. 2 boinc boinc    569686 Oct 13 12:10 input.tar.gz
[2025-10-13 16:30:40] -rw-r--r--. 1 boinc boinc         0 Oct 13 12:10 boinc_lockfile
[2025-10-13 16:30:40] -rw-r--r--. 1 boinc boinc      2550 Oct 13 12:10 pandaJob.out
[2025-10-13 16:30:40] -rw-------. 1 boinc boinc    972849 Oct 13 12:13 agis_schedconf.cvmfs.json
[2025-10-13 16:30:40] drwx------. 5 boinc boinc      4096 Oct 13 12:14 pilot3
[2025-10-13 16:30:40] -rw-------. 1 boinc boinc 198592407 Oct 13 16:26 HITS.46676269._089440.pool.root.1
[2025-10-13 16:30:40] -rw-r--r--. 1 boinc boinc       531 Oct 13 16:26 boinc_task_state.xml
[2025-10-13 16:30:40] -rw-------. 1 boinc boinc      1013 Oct 13 16:27 memory_monitor_summary.json
[2025-10-13 16:30:40] -rw-------. 1 boinc boinc   1560580 Oct 13 16:27 agis_ddmendpoints.agis.ALL.json
[2025-10-13 16:30:40] -rw-------. 1 boinc boinc    475225 Oct 13 16:27 log.46676269._089440.job.log.tgz.1
[2025-10-13 16:30:40] -rw-------. 1 boinc boinc      7781 Oct 13 16:29 heartbeat.json
[2025-10-13 16:30:40] -rw-------. 1 boinc boinc        95 Oct 13 16:30 pilot_heartbeat.json
[2025-10-13 16:30:40] -rw-r--r--. 1 boinc boinc      8192 Oct 13 16:30 boinc_mmap_file
[2025-10-13 16:30:40] -rw-r--r--. 1 boinc boinc        28 Oct 13 16:30 wrapper_checkpoint.txt
[2025-10-13 16:30:40] -rw-------. 1 boinc boinc      4884 Oct 13 16:30 pilotlog.txt
[2025-10-13 16:30:40] -rw-------. 1 boinc boinc   2054010 Oct 13 16:30 log.46676269._089440.job.log.1
[2025-10-13 16:30:40] -rw-------. 1 boinc boinc       357 Oct 13 16:30 output.list
[2025-10-13 16:30:40] -rw-r--r--. 1 boinc boinc       620 Oct 13 16:30 runtime_log
[2025-10-13 16:30:40] -rw-------. 1 boinc boinc   2549760 Oct 13 16:30 result.tar.gz
[2025-10-13 16:30:40] -rw-------. 1 boinc boinc       657 Oct 13 16:30 ynbNDmpPIS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm22UMDmeTceQm.diag
[2025-10-13 16:30:40] -rw-r--r--. 1 boinc boinc      8703 Oct 13 16:30 runtime_log.err
[2025-10-13 16:30:40] -rw-r--r--. 1 boinc boinc     20558 Oct 13 16:30 stderr.txt
[2025-10-13 16:30:41] HITS file was successfully produced:
[2025-10-13 16:30:41] -rw-------. 1 boinc boinc 198592407 Oct 13 16:26 shared/HITS.pool.root.1
[2025-10-13 16:30:41]  *** Contents of shared directory: ***
[2025-10-13 16:30:41] total 411232
[2025-10-13 16:30:41] -rw-r--r--. 2 boinc boinc 219364093 Oct 13 12:10 ATLAS.root_0
[2025-10-13 16:30:41] -rw-r--r--. 2 boinc boinc     15120 Oct 13 12:10 start_atlas.sh
[2025-10-13 16:30:41] -rw-r--r--. 2 boinc boinc    569686 Oct 13 12:10 input.tar.gz
[2025-10-13 16:30:41] -rw-------. 1 boinc boinc 198592407 Oct 13 16:26 HITS.pool.root.1
[2025-10-13 16:30:41] -rw-------. 1 boinc boinc   2549760 Oct 13 16:30 result.tar.gz
16:30:42 (27462): run_atlas exited; CPU time 56027.363469
16:30:42 (27462): called boinc_finish(0)

</stderr_txt>
]]>

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