Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:03:02 (4143398): wrapper (7.7.26015): starting
18:03:02 (4143398): wrapper: running run_atlas (--nthreads 6)
[2025-10-13 18:03:02] Arguments: --nthreads 6
[2025-10-13 18:03:02] Threads: 6
[2025-10-13 18:03:02] Checking for CVMFS
[2025-10-13 18:03:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 18:03:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 18:03:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 18:03:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 18:03:03] 2.12.7.0 249871 7105 94536 151654 2 188 14020172 20971521 929 130560 0 12114935 99.996 243486 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.35.143:3126 1
[2025-10-13 18:03:03] CVMFS is ok
[2025-10-13 18:03:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 18:03:03] Checking for apptainer binary...
[2025-10-13 18:03:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 18:03:03] Running /usr/bin/apptainer --version
[2025-10-13 18:03:03] apptainer version 1.4.0-1.el9
[2025-10-13 18:03:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 18:03:03] testio005
[2025-10-13 18:03:03] apptainer works
[2025-10-13 18:03:03] Set ATHENA_PROC_NUMBER=6
[2025-10-13 18:03:03] Set ATHENA_CORE_NUMBER=6
[2025-10-13 18:03:03] Starting ATLAS job with PandaID=6840749204
[2025-10-13 18:03:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 19:33:33]  *** The last 200 lines of the pilot log: ***
[2025-10-13 19:33:33] 2025-10-13 10:32:23,474 | INFO     | monitor loop #413: job 0:6840749204 is in state 'finished'
[2025-10-13 19:33:33] 2025-10-13 10:32:23,474 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 19:33:33] 2025-10-13 10:32:25,015 | INFO     | time since job start (5346s) is within the limit (172800.0s)
[2025-10-13 19:33:33] 2025-10-13 10:32:25,977 | INFO     | monitor loop #414: job 0:6840749204 is in state 'finished'
[2025-10-13 19:33:33] 2025-10-13 10:32:25,977 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 19:33:33] 2025-10-13 10:32:27,020 | INFO     | time since job start (5348s) is within the limit (172800.0s)
[2025-10-13 19:33:33] 2025-10-13 10:32:28,479 | INFO     | monitor loop #415: job 0:6840749204 is in state 'finished'
[2025-10-13 19:33:33] 2025-10-13 10:32:28,479 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 19:33:33] 2025-10-13 10:32:29,022 | INFO     | time since job start (5350s) is within the limit (172800.0s)
[2025-10-13 19:33:33] 2025-10-13 10:32:30,982 | INFO     | monitor loop #416: job 0:6840749204 is in state 'finished'
[2025-10-13 19:33:33] 2025-10-13 10:32:30,983 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 19:33:33] 2025-10-13 10:32:31,028 | INFO     | time since job start (5352s) is within the limit (172800.0s)
[2025-10-13 19:33:33] 2025-10-13 10:32:32,129 | INFO     | PID=4147196 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 19:33:33] 2025-10-13 10:32:32,129 | INFO     | .. there are 2 such processes running
[2025-10-13 19:33:33] 2025-10-13 10:32:33,129 | INFO     | time since job start (5354s) is within the limit (172800.0s)
[2025-10-13 19:33:33] 2025-10-13 10:32:33,486 | INFO     | monitor loop #417: job 0:6840749204 is in state 'finished'
[2025-10-13 19:33:33] 2025-10-13 10:32:33,486 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 19:33:33] 2025-10-13 10:32:35,135 | INFO     | time since job start (5356s) is within the limit (172800.0s)
[2025-10-13 19:33:33] 2025-10-13 10:32:35,989 | INFO     | monitor loop #418: job 0:6840749204 is in state 'finished'
[2025-10-13 19:33:33] 2025-10-13 10:32:35,989 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 19:33:33] 2025-10-13 10:32:37,140 | INFO     | time since job start (5358s) is within the limit (172800.0s)
[2025-10-13 19:33:33] 2025-10-13 10:32:38,492 | INFO     | monitor loop #419: job 0:6840749204 is in state 'finished'
[2025-10-13 19:33:33] 2025-10-13 10:32:38,492 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 19:33:33] 2025-10-13 10:32:39,145 | INFO     | time since job start (5360s) is within the limit (172800.0s)
[2025-10-13 19:33:33] 2025-10-13 10:32:40,995 | INFO     | monitor loop #420: job 0:6840749204 is in state 'finished'
[2025-10-13 19:33:33] 2025-10-13 10:32:40,995 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 19:33:33] 2025-10-13 10:32:41,151 | INFO     | time since job start (5362s) is within the limit (172800.0s)
[2025-10-13 19:33:33] 2025-10-13 10:32:43,156 | INFO     | time since job start (5364s) is within the limit (172800.0s)
[2025-10-13 19:33:33] 2025-10-13 10:32:43,496 | INFO     | monitor loop #421: job 0:6840749204 is in state 'finished'
[2025-10-13 19:33:33] 2025-10-13 10:32:43,497 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 19:33:33] 2025-10-13 10:32:45,157 | INFO     | time since job start (5366s) is within the limit (172800.0s)
[2025-10-13 19:33:33] 2025-10-13 10:32:45,999 | INFO     | monitor loop #422: job 0:6840749204 is in state 'finished'
[2025-10-13 19:33:33] 2025-10-13 10:32:45,999 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 19:33:33] 2025-10-13 10:32:46,480 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 19:33:33] 2025-10-13 10:32:46,482 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3308.1691875
[2025-10-13 19:33:33] 2025-10-13 10:32:46,484 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6840749204/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 19:33:33] 2025-10-13 10:32:46,485 | INFO     | extracted standard info from prmon json
[2025-10-13 19:33:33] 2025-10-13 10:32:46,485 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 19:33:33] 2025-10-13 10:32:46,485 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 19:33:33] 2025-10-13 10:32:46,485 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 19:33:33] 2025-10-13 10:32:46,485 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 19:33:33] 2025-10-13 10:32:46,486 | INFO     | fitting pss+swap vs Time
[2025-10-13 19:33:33] 2025-10-13 10:32:46,486 | INFO     | sum of square deviations: 158737860.0
[2025-10-13 19:33:33] 2025-10-13 10:32:46,486 | INFO     | sum of deviations: -178085260.49999997
[2025-10-13 19:33:33] 2025-10-13 10:32:46,487 | INFO     | mean x: 1760348936.5
[2025-10-13 19:33:33] 2025-10-13 10:32:46,487 | INFO     | mean y: 2456731.6625
[2025-10-13 19:33:33] 2025-10-13 10:32:46,487 | INFO     | -- intersect: 1977361766.463274
[2025-10-13 19:33:33] 2025-10-13 10:32:46,487 | INFO     | intersect: 1977361766.463274
[2025-10-13 19:33:33] 2025-10-13 10:32:46,487 | INFO     | chi2: 0.03203264218051954
[2025-10-13 19:33:33] 2025-10-13 10:32:46,487 | INFO     | -- intersect: 1977361766.463274
[2025-10-13 19:33:33] 2025-10-13 10:32:46,487 | INFO     | current memory leak: -1.12 B/s (using 80 data points, chi2=0.03)
[2025-10-13 19:33:33] 2025-10-13 10:32:46,487 | INFO     | could have reported an average CPU frequency of 3329 MHz (6 samples)
[2025-10-13 19:33:33] 2025-10-13 10:32:46,487 | INFO     | ..............................
[2025-10-13 19:33:33] 2025-10-13 10:32:46,487 | INFO     | . Timing measurements:
[2025-10-13 19:33:33] 2025-10-13 10:32:46,487 | INFO     | . get job = 0 s
[2025-10-13 19:33:33] 2025-10-13 10:32:46,487 | INFO     | . initial setup = 9 s
[2025-10-13 19:33:33] 2025-10-13 10:32:46,487 | INFO     | . payload setup = 4 s
[2025-10-13 19:33:33] 2025-10-13 10:32:46,488 | INFO     | . stage-in = 0 s
[2025-10-13 19:33:33] 2025-10-13 10:32:46,488 | INFO     | . payload execution = 5263 s
[2025-10-13 19:33:33] 2025-10-13 10:32:46,488 | INFO     | . stage-out = 0 s
[2025-10-13 19:33:33] 2025-10-13 10:32:46,488 | INFO     | . log creation = 0 s
[2025-10-13 19:33:33] 2025-10-13 10:32:46,488 | INFO     | ..............................
[2025-10-13 19:33:33] 2025-10-13 10:32:46,549 | INFO     | 
[2025-10-13 19:33:33] 2025-10-13 10:32:46,549 | INFO     | job summary report
[2025-10-13 19:33:33] 2025-10-13 10:32:46,549 | INFO     | --------------------------------------------------
[2025-10-13 19:33:33] 2025-10-13 10:32:46,549 | INFO     | PanDA job id: 6840749204
[2025-10-13 19:33:33] 2025-10-13 10:32:46,549 | INFO     | task id: 46676269
[2025-10-13 19:33:33] 2025-10-13 10:32:46,549 | INFO     | errors: (none)
[2025-10-13 19:33:33] 2025-10-13 10:32:46,549 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 19:33:33] 2025-10-13 10:32:46,549 | INFO     | pilot state: finished 
[2025-10-13 19:33:33] 2025-10-13 10:32:46,549 | INFO     | transexitcode: 0
[2025-10-13 19:33:33] 2025-10-13 10:32:46,550 | INFO     | exeerrorcode: 0
[2025-10-13 19:33:33] 2025-10-13 10:32:46,550 | INFO     | exeerrordiag: 
[2025-10-13 19:33:33] 2025-10-13 10:32:46,550 | INFO     | exitcode: 0
[2025-10-13 19:33:33] 2025-10-13 10:32:46,550 | INFO     | exitmsg: OK
[2025-10-13 19:33:33] 2025-10-13 10:32:46,550 | INFO     | cpuconsumptiontime: 29326 s
[2025-10-13 19:33:33] 2025-10-13 10:32:46,550 | INFO     | nevents: 400
[2025-10-13 19:33:33] 2025-10-13 10:32:46,550 | INFO     | neventsw: 0
[2025-10-13 19:33:33] 2025-10-13 10:32:46,550 | INFO     | pid: 4153952
[2025-10-13 19:33:33] 2025-10-13 10:32:46,550 | INFO     | pgrp: 4153952
[2025-10-13 19:33:33] 2025-10-13 10:32:46,550 | INFO     | corecount: 6
[2025-10-13 19:33:33] 2025-10-13 10:32:46,551 | INFO     | event service: False
[2025-10-13 19:33:33] 2025-10-13 10:32:46,551 | INFO     | sizes: {0: 2348857, 4: 2349119, 11: 2349147, 5272: 2375566, 5273: 2384564, 5275: 2384620, 5353: 2384942}
[2025-10-13 19:33:33] 2025-10-13 10:32:46,551 | INFO     | --------------------------------------------------
[2025-10-13 19:33:33] 2025-10-13 10:32:46,551 | INFO     | 
[2025-10-13 19:33:33] 2025-10-13 10:32:46,551 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-13 19:33:33] 2025-10-13 10:32:46,567 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 19:33:33] 2025-10-13 10:32:46,567 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 19:33:33] 2025-10-13 10:32:46,567 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 19:33:33] 2025-10-13 10:32:46,567 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 19:33:33] 2025-10-13 10:32:46,567 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 19:33:33] 2025-10-13 10:32:46,567 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 19:33:33] 2025-10-13 10:32:46,568 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 19:33:33] 2025-10-13 10:32:46,568 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 19:33:33] 2025-10-13 10:32:46,568 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 19:33:33] 2025-10-13 10:32:46,568 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 19:33:33] 2025-10-13 10:32:46,568 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 19:33:33] 2025-10-13 10:32:46,568 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 19:33:33] 2025-10-13 10:32:46,568 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 19:33:33] 2025-10-13 10:32:46,568 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 19:33:33] 2025-10-13 10:32:46,568 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 19:33:33] 2025-10-13 10:32:46,568 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 19:33:33] 2025-10-13 10:32:46,568 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 19:33:33] 2025-10-13 10:32:46,568 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 19:33:33] 2025-10-13 10:32:46,568 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 19:33:33] 2025-10-13 10:32:46,568 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 19:33:33] 2025-10-13 10:32:46,568 | INFO     | job 6840749204 has completed (purged errors)
[2025-10-13 19:33:33] 2025-10-13 10:32:46,569 | INFO     | overall cleanup function is called
[2025-10-13 19:33:33] 2025-10-13 10:32:47,575 | INFO     | --- collectZombieJob: --- 10, [4153952]
[2025-10-13 19:33:33] 2025-10-13 10:32:47,575 | INFO     | zombie collector waiting for pid 4153952
[2025-10-13 19:33:33] 2025-10-13 10:32:47,575 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 19:33:33] 2025-10-13 10:32:47,576 | INFO     | collected zombie processes
[2025-10-13 19:33:33] 2025-10-13 10:32:47,576 | INFO     | will attempt to kill all subprocesses of pid=4153952
[2025-10-13 19:33:33] 2025-10-13 10:32:47,661 | INFO     | process IDs to be killed: [4153952] (in reverse order)
[2025-10-13 19:33:33] 2025-10-13 10:32:47,704 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 19:33:33] 2025-10-13 10:32:47,705 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 19:33:33] 2025-10-13 10:32:47,707 | INFO     | did not find any defunct processes belonging to 4153952
[2025-10-13 19:33:33] 2025-10-13 10:32:47,710 | INFO     | did not find any defunct processes belonging to 4153952
[2025-10-13 19:33:33] 2025-10-13 10:32:47,710 | INFO     | ready for new job
[2025-10-13 19:33:33] 2025-10-13 10:32:47,710 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 19:33:33] 2025-10-13 10:32:47,711 | INFO     | ***************************************
[2025-10-13 19:33:33] 2025-10-13 10:32:47,711 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 19:33:33] 2025-10-13 10:32:47,711 | INFO     | ***************************************
[2025-10-13 19:33:33] 2025-10-13 10:32:47,711 | INFO     | 
[2025-10-13 19:33:33] 2025-10-13 10:32:47,712 | INFO     | architecture information:
[2025-10-13 19:33:33] 2025-10-13 10:32:47,712 | INFO     | executing command: cat /etc/os-release
[2025-10-13 19:33:33] 2025-10-13 10:32:47,722 | INFO     | cat /etc/os-release:
[2025-10-13 19:33:33] NAME="CentOS Linux"
[2025-10-13 19:33:33] VERSION="7 (Core)"
[2025-10-13 19:33:33] ID="centos"
[2025-10-13 19:33:33] ID_LIKE="rhel fedora"
[2025-10-13 19:33:33] VERSION_ID="7"
[2025-10-13 19:33:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 19:33:33] ANSI_COLOR="0;31"
[2025-10-13 19:33:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 19:33:33] HOME_URL="https://www.centos.org/"
[2025-10-13 19:33:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 19:33:33] 
[2025-10-13 19:33:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 19:33:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 19:33:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 19:33:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 19:33:33] 
[2025-10-13 19:33:33] 2025-10-13 10:32:47,723 | INFO     | ***************************************
[2025-10-13 19:33:33] 2025-10-13 10:32:48,225 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-13 19:33:33] 2025-10-13 10:32:48,237 | INFO     | sufficient remaining disk space (96796147712 B)
[2025-10-13 19:33:33] 2025-10-13 10:32:48,237 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 19:33:33] 2025-10-13 10:32:48,237 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 19:33:33] 2025-10-13 10:32:48,237 | INFO     | update_server=False
[2025-10-13 19:33:33] 2025-10-13 10:32:48,237 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 19:33:33] 2025-10-13 10:32:48,238 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 19:33:33] 2025-10-13 10:32:48,238 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 19:33:33] 2025-10-13 10:32:48,367 | INFO     | all job control threads have been joined
[2025-10-13 19:33:33] 2025-10-13 10:32:48,502 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 19:33:33] 2025-10-13 10:32:48,503 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 19:33:33] 2025-10-13 10:32:48,503 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 19:33:33] 2025-10-13 10:32:48,503 | INFO     | will abort loop
[2025-10-13 19:33:33] 2025-10-13 10:32:49,059 | INFO     | all data control threads have been joined
[2025-10-13 19:33:33] 2025-10-13 10:32:49,242 | INFO     | [job] queue monitor thread has finished
[2025-10-13 19:33:33] 2025-10-13 10:32:49,243 | INFO     | [job] retrieve thread has finished
[2025-10-13 19:33:33] 2025-10-13 10:32:49,373 | INFO     | [job] control thread has finished
[2025-10-13 19:33:33] 2025-10-13 10:32:49,373 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 19:33:33] 2025-10-13 10:32:49,443 | INFO     | [payload] validate_post thread has finished
[2025-10-13 19:33:33] 2025-10-13 10:32:49,508 | INFO     | [job] job monitor thread has finished
[2025-10-13 19:33:33] 2025-10-13 10:32:49,539 | INFO     | all payload control threads have been joined
[2025-10-13 19:33:33] 2025-10-13 10:32:50,029 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 19:33:33] 2025-10-13 10:32:50,050 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 19:33:33] 2025-10-13 10:32:50,063 | INFO     | [data] control thread has finished
[2025-10-13 19:33:33] 2025-10-13 10:32:50,178 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 19:33:33] 2025-10-13 10:32:50,243 | INFO     | [data] copytool_out thread has finished
[2025-10-13 19:33:33] 2025-10-13 10:32:50,387 | INFO     | [payload] failed_post thread has finished
[2025-10-13 19:33:33] 2025-10-13 10:32:50,545 | INFO     | [payload] control thread has finished
[2025-10-13 19:33:33] 2025-10-13 10:32:50,553 | INFO     | [job] validate thread has finished
[2025-10-13 19:33:33] 2025-10-13 10:32:50,569 | INFO     | [data] copytool_in thread has finished
[2025-10-13 19:33:33] 2025-10-13 10:32:51,150 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 19:33:33] 2025-10-13 10:32:55,156 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 19:33:33] 2025-10-13 10:33:08,707 [wrapper] supervise_pilot (15 min periods counter: 7)
[2025-10-13 19:33:33] 2025-10-13 10:33:18,336 | INFO     | PID=4147196 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 19:33:33] 2025-10-13 10:33:18,336 | INFO     | .. there are 2 such processes running
[2025-10-13 19:33:33] 2025-10-13 10:33:18,337 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 19:33:33] 2025-10-13 10:33:18,337 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 19:33:33] 2025-10-13 10:33:18,337 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 19:33:33] 2025-10-13 10:33:26,853 | INFO     | [monitor] cgroup control has ended
[2025-10-13 19:33:33] 2025-10-13 10:33:28,801 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140579551803200)>', '<ExcThread(monitor, started 140578826213120)>']
[2025-10-13 19:33:33] 2025-10-13 10:33:29,384 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 19:33:33] 2025-10-13 10:33:29,384 | INFO     | [monitor] control thread has ended
[2025-10-13 19:33:33] 2025-10-13 10:33:33,815 | INFO     | all workflow threads have been joined
[2025-10-13 19:33:33] 2025-10-13 10:33:33,815 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 19:33:33] 2025-10-13 10:33:33,815 | INFO     | traces error code: 0
[2025-10-13 19:33:33] 2025-10-13 10:33:33,815 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 19:33:33] 2025-10-13 10:33:33,886 [wrapper] ==== pilot stdout END ====
[2025-10-13 19:33:33] 2025-10-13 10:33:33,888 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 19:33:33] 2025-10-13 10:33:33,891 [wrapper] pilotpid: 4147196
[2025-10-13 19:33:33] 2025-10-13 10:33:33,893 [wrapper] Pilot exit status: 0
[2025-10-13 19:33:33] 2025-10-13 10:33:33,901 [wrapper] pandaids: 6840749204
[2025-10-13 19:33:33] 2025-10-13 10:33:33,929 [wrapper] cleanup supervisor_pilot 4193470 4147197
[2025-10-13 19:33:33] 2025-10-13 10:33:33,932 [wrapper] Test setup, not cleaning
[2025-10-13 19:33:33] 2025-10-13 10:33:33,934 [wrapper] apfmon messages muted
[2025-10-13 19:33:33] 2025-10-13 10:33:33,936 [wrapper] ==== wrapper stdout END ====
[2025-10-13 19:33:33] 2025-10-13 10:33:33,938 [wrapper] ==== wrapper stderr END ====
[2025-10-13 19:33:33]  *** Error codes and diagnostics ***
[2025-10-13 19:33:33]     "exeErrorCode": 0,
[2025-10-13 19:33:33]     "exeErrorDiag": "",
[2025-10-13 19:33:33]     "pilotErrorCode": 0,
[2025-10-13 19:33:33]     "pilotErrorDiag": "",
[2025-10-13 19:33:33]  *** Listing of results directory ***
[2025-10-13 19:33:33] total 408132
[2025-10-13 19:33:33] -rw-r--r--. 1 boinc boinc    557409 Oct 13 05:23 pilot3.tar.gz
[2025-10-13 19:33:33] -rw-r--r--. 1 boinc boinc      5112 Oct 13 05:26 queuedata.json
[2025-10-13 19:33:33] -rwx------. 1 boinc boinc     36292 Oct 13 05:27 runpilot2-wrapper.sh
[2025-10-13 19:33:33] -rw-r--r--. 1 boinc boinc       100 Oct 13 18:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 19:33:33] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 18:03 run_atlas
[2025-10-13 19:33:33] -rw-r--r--. 1 boinc boinc       105 Oct 13 18:03 job.xml
[2025-10-13 19:33:33] -rw-r--r--. 2 boinc boinc     15120 Oct 13 18:03 start_atlas.sh
[2025-10-13 19:33:33] drwxrwx--x. 2 boinc boinc        68 Oct 13 18:03 shared
[2025-10-13 19:33:33] -rw-r--r--. 2 boinc boinc    569683 Oct 13 18:03 input.tar.gz
[2025-10-13 19:33:33] -rw-r--r--. 1 boinc boinc      9362 Oct 13 18:03 init_data.xml
[2025-10-13 19:33:33] -rw-r--r--. 2 boinc boinc 220662721 Oct 13 18:03 EVNT.46676267._004501.pool.root.1
[2025-10-13 19:33:33] -rw-r--r--. 1 boinc boinc         0 Oct 13 18:03 boinc_lockfile
[2025-10-13 19:33:33] -rw-r--r--. 1 boinc boinc      2550 Oct 13 18:03 pandaJob.out
[2025-10-13 19:33:33] -rw-------. 1 boinc boinc    972857 Oct 13 18:03 agis_schedconf.cvmfs.json
[2025-10-13 19:33:33] -rw-------. 1 boinc boinc   1560580 Oct 13 18:03 agis_ddmendpoints.agis.ALL.json
[2025-10-13 19:33:33] drwx------. 5 boinc boinc      4096 Oct 13 18:03 pilot3
[2025-10-13 19:33:33] -rw-------. 1 boinc boinc 191196620 Oct 13 19:31 HITS.46676269._088725.pool.root.1
[2025-10-13 19:33:33] -rw-r--r--. 1 boinc boinc       529 Oct 13 19:31 boinc_task_state.xml
[2025-10-13 19:33:33] -rw-------. 1 boinc boinc      1018 Oct 13 19:31 memory_monitor_summary.json
[2025-10-13 19:33:33] -rw-------. 1 boinc boinc    309110 Oct 13 19:31 log.46676269._088725.job.log.tgz.1
[2025-10-13 19:33:33] -rw-------. 1 boinc boinc      7748 Oct 13 19:32 heartbeat.json
[2025-10-13 19:33:33] -rw-r--r--. 1 boinc boinc      8192 Oct 13 19:33 boinc_mmap_file
[2025-10-13 19:33:33] -rw-r--r--. 1 boinc boinc        27 Oct 13 19:33 wrapper_checkpoint.txt
[2025-10-13 19:33:33] -rw-------. 1 boinc boinc        95 Oct 13 19:33 pilot_heartbeat.json
[2025-10-13 19:33:33] -rw-------. 1 boinc boinc      5009 Oct 13 19:33 pilotlog.txt
[2025-10-13 19:33:33] -rw-------. 1 boinc boinc    782579 Oct 13 19:33 log.46676269._088725.job.log.1
[2025-10-13 19:33:33] -rw-------. 1 boinc boinc       357 Oct 13 19:33 output.list
[2025-10-13 19:33:33] -rw-r--r--. 1 boinc boinc       620 Oct 13 19:33 runtime_log
[2025-10-13 19:33:33] -rw-------. 1 boinc boinc   1105920 Oct 13 19:33 result.tar.gz
[2025-10-13 19:33:33] -rw-------. 1 boinc boinc       642 Oct 13 19:33 UJGODmoqHS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmSlNDmqAdWpm.diag
[2025-10-13 19:33:33] -rw-r--r--. 1 boinc boinc      8661 Oct 13 19:33 runtime_log.err
[2025-10-13 19:33:33] -rw-r--r--. 1 boinc boinc     21924 Oct 13 19:33 stderr.txt
[2025-10-13 19:33:33] HITS file was successfully produced:
[2025-10-13 19:33:33] -rw-------. 1 boinc boinc 191196620 Oct 13 19:31 shared/HITS.pool.root.1
[2025-10-13 19:33:33]  *** Contents of shared directory: ***
[2025-10-13 19:33:33] total 403864
[2025-10-13 19:33:33] -rw-r--r--. 2 boinc boinc     15120 Oct 13 18:03 start_atlas.sh
[2025-10-13 19:33:33] -rw-r--r--. 2 boinc boinc    569683 Oct 13 18:03 input.tar.gz
[2025-10-13 19:33:33] -rw-r--r--. 2 boinc boinc 220662721 Oct 13 18:03 ATLAS.root_0
[2025-10-13 19:33:33] -rw-------. 1 boinc boinc 191196620 Oct 13 19:31 HITS.pool.root.1
[2025-10-13 19:33:33] -rw-------. 1 boinc boinc   1105920 Oct 13 19:33 result.tar.gz
19:33:35 (4143398): run_atlas exited; CPU time 29383.001907
19:33:35 (4143398): called boinc_finish(0)

</stderr_txt>
]]>

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