Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:45 (2348583): wrapper (7.7.26015): starting
00:04:45 (2348583): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 00:04:45] Arguments: --nthreads 12
[2025-10-13 00:04:45] Threads: 12
[2025-10-13 00:04:45] Checking for CVMFS
[2025-10-13 00:04:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:04:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:04:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:04:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:04:47] 2.13.2.0 124252 116896 138540 151647 0 17 37263181 39288832 6579 16776704 0 68420125 99.741 43941468 35307 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 00:04:47] CVMFS is ok
[2025-10-13 00:04:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:04:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:04:47] Further information can be found at the LHC@home message board.
[2025-10-13 00:04:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:04:47] Checking for apptainer binary...
[2025-10-13 00:04:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:04:47] Running /usr/bin/apptainer --version
[2025-10-13 00:04:47] apptainer version 1.4.3-1.el9
[2025-10-13 00:04:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:04:47] c-210-29.aglt2.org
[2025-10-13 00:04:47] apptainer works
[2025-10-13 00:04:47] Set ATHENA_PROC_NUMBER=12
[2025-10-13 00:04:47] Set ATHENA_CORE_NUMBER=12
[2025-10-13 00:04:47] Starting ATLAS job with PandaID=6840711609
[2025-10-13 00:04:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:36:18]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:36:18] 2025-10-13 11:35:13,588 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 07:36:18] 2025-10-13 11:35:13,588 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 07:36:18] 2025-10-13 11:35:13,621 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:36:18] 2025-10-13 11:35:13,622 | INFO     | sum of square deviations: 26418150341.090908
[2025-10-13 07:36:18] 2025-10-13 11:35:13,639 | INFO     | sum of deviations: 110602097051.49994
[2025-10-13 07:36:18] 2025-10-13 11:35:13,639 | INFO     | mean x: 1760341770.0454545
[2025-10-13 07:36:18] 2025-10-13 11:35:13,640 | INFO     | mean y: 2636690.675
[2025-10-13 07:36:18] 2025-10-13 11:35:13,652 | INFO     | -- intersect: -7367201423.674104
[2025-10-13 07:36:18] 2025-10-13 11:35:13,652 | INFO     | intersect: -7367201423.674104
[2025-10-13 07:36:18] 2025-10-13 11:35:13,653 | INFO     | chi2: 5.752712605925023
[2025-10-13 07:36:18] 2025-10-13 11:35:13,654 | INFO     | sum of square deviations: 25528152262.611538
[2025-10-13 07:36:18] 2025-10-13 11:35:13,671 | INFO     | sum of deviations: 228898869234.14713
[2025-10-13 07:36:18] 2025-10-13 11:35:13,671 | INFO     | mean x: 1760341617.5701149
[2025-10-13 07:36:18] 2025-10-13 11:35:13,672 | INFO     | mean y: 2656911.2574712643
[2025-10-13 07:36:18] 2025-10-13 11:35:13,684 | INFO     | -- intersect: -15781493918.87346
[2025-10-13 07:36:18] 2025-10-13 11:35:13,684 | INFO     | intersect: -15781493918.87346
[2025-10-13 07:36:18] 2025-10-13 11:35:13,685 | INFO     | chi2: 2.871470628788075
[2025-10-13 07:36:18] 2025-10-13 11:35:13,685 | INFO     | current chi2=2.871470628788075 (change=50.08492818100117 %)
[2025-10-13 07:36:18] 2025-10-13 11:35:13,686 | INFO     | sum of square deviations: 24657934806.660534
[2025-10-13 07:36:18] 2025-10-13 11:35:13,703 | INFO     | sum of deviations: 225431743094.8746
[2025-10-13 07:36:18] 2025-10-13 11:35:13,703 | INFO     | mean x: 1760341465.055814
[2025-10-13 07:36:18] 2025-10-13 11:35:13,703 | INFO     | mean y: 2656303.630232558
[2025-10-13 07:36:18] 2025-10-13 11:35:13,703 | INFO     | -- intersect: -16091020965.827265
[2025-10-13 07:36:18] 2025-10-13 11:35:13,703 | INFO     | intersect: -16091020965.827265
[2025-10-13 07:36:18] 2025-10-13 11:35:13,716 | INFO     | chi2: 2.8712459347328525
[2025-10-13 07:36:18] 2025-10-13 11:35:13,717 | INFO     | current chi2=2.8712459347328525 (change=0.007825051489983071 %)
[2025-10-13 07:36:18] 2025-10-13 11:35:13,717 | INFO     | right removable region: 429
[2025-10-13 07:36:18] 2025-10-13 11:35:13,717 | INFO     | sum of square deviations: 25527522248.322132
[2025-10-13 07:36:18] 2025-10-13 11:35:13,734 | INFO     | sum of deviations: -11500284792.747112
[2025-10-13 07:36:18] 2025-10-13 11:35:13,735 | INFO     | mean x: 1760341922.5747128
[2025-10-13 07:36:18] 2025-10-13 11:35:13,735 | INFO     | mean y: 2657565.222988506
[2025-10-13 07:36:18] 2025-10-13 11:35:13,735 | INFO     | -- intersect: 795700981.0817997
[2025-10-13 07:36:18] 2025-10-13 11:35:13,735 | INFO     | intersect: 795700981.0817997
[2025-10-13 07:36:18] 2025-10-13 11:35:13,748 | INFO     | chi2: 3.195870319314806
[2025-10-13 07:36:18] 2025-10-13 11:35:13,748 | INFO     | current chi2=3.195870319314806 (change=44.44585470820826 %)
[2025-10-13 07:36:18] 2025-10-13 11:35:13,749 | INFO     | sum of square deviations: 24657179804.699932
[2025-10-13 07:36:18] 2025-10-13 11:35:13,766 | INFO     | sum of deviations: -49155263218.80003
[2025-10-13 07:36:18] 2025-10-13 11:35:13,766 | INFO     | mean x: 1760342075.1
[2025-10-13 07:36:18] 2025-10-13 11:35:13,766 | INFO     | mean y: 2664152.3674418605
[2025-10-13 07:36:18] 2025-10-13 11:35:13,766 | INFO     | -- intersect: 3511989985.331338
[2025-10-13 07:36:18] 2025-10-13 11:35:13,766 | INFO     | intersect: 3511989985.331338
[2025-10-13 07:36:18] 2025-10-13 11:35:13,780 | INFO     | chi2: 2.9593547364964143
[2025-10-13 07:36:18] 2025-10-13 11:35:13,780 | INFO     | current chi2=2.9593547364964143 (change=7.400662704896627 %)
[2025-10-13 07:36:18] 2025-10-13 11:35:13,780 | INFO     | left removable region: 20
[2025-10-13 07:36:18] 2025-10-13 11:35:13,781 | INFO     | sum of square deviations: 21218544614.014698
[2025-10-13 07:36:18] 2025-10-13 11:35:13,793 | INFO     | sum of deviations: 50311566354.44993
[2025-10-13 07:36:18] 2025-10-13 11:35:13,793 | INFO     | mean x: 1760342044.623472
[2025-10-13 07:36:18] 2025-10-13 11:35:13,794 | INFO     | mean y: 2687905.119804401
[2025-10-13 07:36:18] 2025-10-13 11:35:13,794 | INFO     | -- intersect: -4171281949.820432
[2025-10-13 07:36:18] 2025-10-13 11:35:13,794 | INFO     | intersect: -4171281949.820432
[2025-10-13 07:36:18] 2025-10-13 11:35:13,794 | INFO     | chi2: 0.010572041071101984
[2025-10-13 07:36:18] 2025-10-13 11:35:13,811 | INFO     | -- intersect: -4171281949.820432
[2025-10-13 07:36:18] 2025-10-13 11:35:13,811 | INFO     | current memory leak: 2.37 B/s (using 409 data points, chi2=0.01)
[2025-10-13 07:36:18] 2025-10-13 11:35:13,812 | INFO     | could have reported an average CPU frequency of 2600 MHz (18 samples)
[2025-10-13 07:36:18] 2025-10-13 11:35:13,812 | INFO     | ..............................
[2025-10-13 07:36:18] 2025-10-13 11:35:13,812 | INFO     | . Timing measurements:
[2025-10-13 07:36:18] 2025-10-13 11:35:13,812 | INFO     | . get job = 0 s
[2025-10-13 07:36:18] 2025-10-13 11:35:13,813 | INFO     | . initial setup = 3 s
[2025-10-13 07:36:18] 2025-10-13 11:35:13,813 | INFO     | . payload setup = 18 s
[2025-10-13 07:36:18] 2025-10-13 11:35:13,813 | INFO     | . stage-in = 0 s
[2025-10-13 07:36:18] 2025-10-13 11:35:13,813 | INFO     | . payload execution = 26853 s
[2025-10-13 07:36:18] 2025-10-13 11:35:13,813 | INFO     | . stage-out = 16 s
[2025-10-13 07:36:18] 2025-10-13 11:35:13,813 | INFO     | . log creation = 3 s
[2025-10-13 07:36:18] 2025-10-13 11:35:13,813 | INFO     | ..............................
[2025-10-13 07:36:18] 2025-10-13 11:35:14,416 | INFO     | 
[2025-10-13 07:36:18] 2025-10-13 11:35:14,416 | INFO     | job summary report
[2025-10-13 07:36:18] 2025-10-13 11:35:14,416 | INFO     | --------------------------------------------------
[2025-10-13 07:36:18] 2025-10-13 11:35:14,416 | INFO     | PanDA job id: 6840711609
[2025-10-13 07:36:18] 2025-10-13 11:35:14,416 | INFO     | task id: 46676269
[2025-10-13 07:36:18] 2025-10-13 11:35:14,416 | INFO     | errors: (none)
[2025-10-13 07:36:18] 2025-10-13 11:35:14,417 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:36:18] 2025-10-13 11:35:14,417 | INFO     | pilot state: finished 
[2025-10-13 07:36:18] 2025-10-13 11:35:14,417 | INFO     | transexitcode: 0
[2025-10-13 07:36:18] 2025-10-13 11:35:14,417 | INFO     | exeerrorcode: 0
[2025-10-13 07:36:18] 2025-10-13 11:35:14,417 | INFO     | exeerrordiag: 
[2025-10-13 07:36:18] 2025-10-13 11:35:14,417 | INFO     | exitcode: 0
[2025-10-13 07:36:18] 2025-10-13 11:35:14,417 | INFO     | exitmsg: OK
[2025-10-13 07:36:18] 2025-10-13 11:35:14,417 | INFO     | cpuconsumptiontime: 57473 s
[2025-10-13 07:36:18] 2025-10-13 11:35:14,417 | INFO     | nevents: 400
[2025-10-13 07:36:18] 2025-10-13 11:35:14,417 | INFO     | neventsw: 0
[2025-10-13 07:36:18] 2025-10-13 11:35:14,417 | INFO     | pid: 2368035
[2025-10-13 07:36:18] 2025-10-13 11:35:14,417 | INFO     | pgrp: 2368035
[2025-10-13 07:36:18] 2025-10-13 11:35:14,418 | INFO     | corecount: 12
[2025-10-13 07:36:18] 2025-10-13 11:35:14,418 | INFO     | event service: False
[2025-10-13 07:36:18] 2025-10-13 11:35:14,418 | INFO     | sizes: {0: 2348585, 1: 2348784, 13: 2349102, 23: 2349102, 26877: 2385321, 26879: 2385320, 26897: 2394502, 26901: 2394558, 26968: 2394752}
[2025-10-13 07:36:18] 2025-10-13 11:35:14,418 | INFO     | --------------------------------------------------
[2025-10-13 07:36:18] 2025-10-13 11:35:14,418 | INFO     | 
[2025-10-13 07:36:18] 2025-10-13 11:35:14,418 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 07:36:18] 2025-10-13 11:35:14,770 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:36:18] 2025-10-13 11:35:14,771 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:36:18] 2025-10-13 11:35:14,771 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:36:18] 2025-10-13 11:35:14,771 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:36:18] 2025-10-13 11:35:14,771 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:36:18] 2025-10-13 11:35:14,771 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:36:18] 2025-10-13 11:35:14,771 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:36:18] 2025-10-13 11:35:14,771 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:36:18] 2025-10-13 11:35:14,771 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:36:18] 2025-10-13 11:35:14,771 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:36:18] 2025-10-13 11:35:14,772 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:36:18] 2025-10-13 11:35:14,772 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:36:18] 2025-10-13 11:35:14,772 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:36:18] 2025-10-13 11:35:14,772 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:36:18] 2025-10-13 11:35:14,772 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:36:18] 2025-10-13 11:35:14,772 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:36:18] 2025-10-13 11:35:14,772 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:36:18] 2025-10-13 11:35:14,772 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:36:18] 2025-10-13 11:35:14,772 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:36:18] 2025-10-13 11:35:14,772 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:36:18] 2025-10-13 11:35:14,785 | INFO     | job 6840711609 has completed (purged errors)
[2025-10-13 07:36:18] 2025-10-13 11:35:14,785 | INFO     | overall cleanup function is called
[2025-10-13 07:36:18] 2025-10-13 11:35:15,816 | INFO     | --- collectZombieJob: --- 10, [2368035]
[2025-10-13 07:36:18] 2025-10-13 11:35:15,816 | INFO     | zombie collector waiting for pid 2368035
[2025-10-13 07:36:18] 2025-10-13 11:35:15,816 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:36:18] 2025-10-13 11:35:15,816 | INFO     | collected zombie processes
[2025-10-13 07:36:18] 2025-10-13 11:35:15,817 | INFO     | will attempt to kill all subprocesses of pid=2368035
[2025-10-13 07:36:18] 2025-10-13 11:35:17,341 [wrapper] supervise_pilot (15 min periods counter: 31)
[2025-10-13 07:36:18] 2025-10-13 11:35:17,904 | INFO     | process IDs to be killed: [2368035] (in reverse order)
[2025-10-13 07:36:18] 2025-10-13 11:35:18,061 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:36:18] 2025-10-13 11:35:18,062 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:36:18] 2025-10-13 11:35:18,075 | INFO     | did not find any defunct processes belonging to 2368035
[2025-10-13 07:36:18] 2025-10-13 11:35:18,091 | INFO     | did not find any defunct processes belonging to 2368035
[2025-10-13 07:36:18] 2025-10-13 11:35:18,092 | INFO     | ready for new job
[2025-10-13 07:36:18] 2025-10-13 11:35:18,092 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:36:18] 2025-10-13 11:35:18,099 | INFO     | ***************************************
[2025-10-13 07:36:18] 2025-10-13 11:35:18,099 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:36:18] 2025-10-13 11:35:18,099 | INFO     | ***************************************
[2025-10-13 07:36:18] 2025-10-13 11:35:18,099 | INFO     | 
[2025-10-13 07:36:18] 2025-10-13 11:35:18,101 | INFO     | architecture information:
[2025-10-13 07:36:18] 2025-10-13 11:35:18,106 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:36:18] 2025-10-13 11:35:18,524 | INFO     | cat /etc/os-release:
[2025-10-13 07:36:18] NAME="CentOS Linux"
[2025-10-13 07:36:18] VERSION="7 (Core)"
[2025-10-13 07:36:18] ID="centos"
[2025-10-13 07:36:18] ID_LIKE="rhel fedora"
[2025-10-13 07:36:18] VERSION_ID="7"
[2025-10-13 07:36:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:36:18] ANSI_COLOR="0;31"
[2025-10-13 07:36:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:36:18] HOME_URL="https://www.centos.org/"
[2025-10-13 07:36:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:36:18] 
[2025-10-13 07:36:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:36:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:36:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:36:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:36:18] 
[2025-10-13 07:36:18] 2025-10-13 11:35:18,525 | INFO     | ***************************************
[2025-10-13 07:36:18] 2025-10-13 11:35:19,028 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 07:36:18] 2025-10-13 11:35:19,285 | INFO     | sufficient remaining disk space (52554629120 B)
[2025-10-13 07:36:18] 2025-10-13 11:35:19,286 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:36:18] 2025-10-13 11:35:19,286 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:36:18] 2025-10-13 11:35:19,286 | INFO     | update_server=False
[2025-10-13 07:36:18] 2025-10-13 11:35:19,286 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:36:18] 2025-10-13 11:35:19,287 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:36:18] 2025-10-13 11:35:19,287 | INFO     | aborting loop
[2025-10-13 07:36:18] 2025-10-13 11:35:19,326 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:36:18] 2025-10-13 11:35:19,601 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:36:18] 2025-10-13 11:35:19,822 | INFO     | all data control threads have been joined
[2025-10-13 07:36:18] 2025-10-13 11:35:20,317 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:36:18] 2025-10-13 11:35:20,328 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:36:18] 2025-10-13 11:35:20,335 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:36:18] 2025-10-13 11:35:20,350 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:36:18] 2025-10-13 11:35:20,473 | INFO     | all job control threads have been joined
[2025-10-13 07:36:18] 2025-10-13 11:35:20,483 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:36:18] 2025-10-13 11:35:20,640 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:36:18] 2025-10-13 11:35:20,650 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:36:18] 2025-10-13 11:35:20,794 | INFO     | all payload control threads have been joined
[2025-10-13 07:36:18] 2025-10-13 11:35:20,855 | INFO     | [data] control thread has finished
[2025-10-13 07:36:18] 2025-10-13 11:35:20,911 | INFO     | [job] validate thread has finished
[2025-10-13 07:36:18] 2025-10-13 11:35:20,986 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:36:18] 2025-10-13 11:35:21,030 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:36:18] 2025-10-13 11:35:21,371 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:36:18] 2025-10-13 11:35:21,379 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:36:18] 2025-10-13 11:35:21,522 | INFO     | [job] control thread has finished
[2025-10-13 07:36:18] 2025-10-13 11:35:21,802 | INFO     | [payload] control thread has finished
[2025-10-13 07:36:18] 2025-10-13 11:35:21,825 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:36:18] 2025-10-13 11:35:25,394 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:36:18] 2025-10-13 11:35:47,742 | INFO     | PID=2353515 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 07:36:18] 2025-10-13 11:35:47,742 | INFO     | .. there are 8 such processes running
[2025-10-13 07:36:18] 2025-10-13 11:35:47,743 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:36:18] 2025-10-13 11:35:47,743 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:36:18] 2025-10-13 11:35:47,743 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:36:18] 2025-10-13 11:36:08,281 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:36:18] 2025-10-13 11:36:08,842 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140395763603264)>', '<ExcThread(monitor, started 140395266684672)>']
[2025-10-13 07:36:18] 2025-10-13 11:36:09,072 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:36:18] 2025-10-13 11:36:09,072 | INFO     | [monitor] control thread has ended
[2025-10-13 07:36:18] 2025-10-13 11:36:13,868 | INFO     | all workflow threads have been joined
[2025-10-13 07:36:18] 2025-10-13 11:36:13,870 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:36:18] 2025-10-13 11:36:13,870 | INFO     | traces error code: 0
[2025-10-13 07:36:18] 2025-10-13 11:36:13,870 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:36:18] 2025-10-13 11:36:16,032 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:36:18] 2025-10-13 11:36:16,086 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:36:18] 2025-10-13 11:36:16,127 [wrapper] pilotpid: 2353515
[2025-10-13 07:36:18] 2025-10-13 11:36:16,165 [wrapper] Pilot exit status: 0
[2025-10-13 07:36:18] 2025-10-13 11:36:16,273 [wrapper] pandaids: 6840711609
[2025-10-13 07:36:18] 2025-10-13 11:36:16,745 [wrapper] cleanup supervisor_pilot 2976787 2353516
[2025-10-13 07:36:18] 2025-10-13 11:36:16,862 [wrapper] Test setup, not cleaning
[2025-10-13 07:36:18] 2025-10-13 11:36:16,908 [wrapper] apfmon messages muted
[2025-10-13 07:36:18] 2025-10-13 11:36:16,940 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:36:18] 2025-10-13 11:36:16,973 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:36:18]  *** Error codes and diagnostics ***
[2025-10-13 07:36:18]     "exeErrorCode": 0,
[2025-10-13 07:36:18]     "exeErrorDiag": "",
[2025-10-13 07:36:18]     "pilotErrorCode": 0,
[2025-10-13 07:36:18]     "pilotErrorDiag": "",
[2025-10-13 07:36:18]  *** Listing of results directory ***
[2025-10-13 07:36:18] total 425416
[2025-10-13 07:36:18] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 14:53 pilot3.tar.gz
[2025-10-13 07:36:18] -rwx------. 1 boincer umatlas     36292 Oct 12 15:14 runpilot2-wrapper.sh
[2025-10-13 07:36:18] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 15:14 queuedata.json
[2025-10-13 07:36:18] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:36:18] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:04 run_atlas
[2025-10-13 07:36:18] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:04 job.xml
[2025-10-13 07:36:18] -rw-r--r--. 2 boincer umatlas 222060753 Oct 13 00:04 EVNT.46676267._002155.pool.root.1
[2025-10-13 07:36:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:04 start_atlas.sh
[2025-10-13 07:36:18] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:04 shared
[2025-10-13 07:36:18] -rw-r--r--. 2 boincer umatlas    569684 Oct 13 00:04 input.tar.gz
[2025-10-13 07:36:18] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:04 boinc_lockfile
[2025-10-13 07:36:18] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 00:04 pandaJob.out
[2025-10-13 07:36:18] -rw-------. 1 boincer umatlas    974373 Oct 13 00:05 agis_schedconf.cvmfs.json
[2025-10-13 07:36:18] drwx------. 5 boincer umatlas      4096 Oct 13 00:05 pilot3
[2025-10-13 07:36:18] -rw-------. 1 boincer umatlas 201835844 Oct 13 07:28 HITS.46676269._087177.pool.root.1
[2025-10-13 07:36:18] -rw-r--r--. 1 boincer umatlas       531 Oct 13 07:29 boinc_task_state.xml
[2025-10-13 07:36:18] -rw-r--r--. 1 boincer umatlas      6660 Oct 13 07:31 init_data.xml
[2025-10-13 07:36:18] -rw-------. 1 boincer umatlas      1042 Oct 13 07:33 memory_monitor_summary.json
[2025-10-13 07:36:18] -rw-------. 1 boincer umatlas   1560580 Oct 13 07:33 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:36:18] -rw-------. 1 boincer umatlas    670769 Oct 13 07:33 log.46676269._087177.job.log.tgz.1
[2025-10-13 07:36:18] -rw-------. 1 boincer umatlas      7827 Oct 13 07:35 heartbeat.json
[2025-10-13 07:36:18] -rw-------. 1 boincer umatlas        95 Oct 13 07:35 pilot_heartbeat.json
[2025-10-13 07:36:18] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 07:35 boinc_mmap_file
[2025-10-13 07:36:18] -rw-r--r--. 1 boincer umatlas        28 Oct 13 07:35 wrapper_checkpoint.txt
[2025-10-13 07:36:18] -rw-------. 1 boincer umatlas      4823 Oct 13 07:36 pilotlog.txt
[2025-10-13 07:36:18] -rw-------. 1 boincer umatlas   3243765 Oct 13 07:36 log.46676269._087177.job.log.1
[2025-10-13 07:36:18] -rw-------. 1 boincer umatlas       357 Oct 13 07:36 output.list
[2025-10-13 07:36:18] -rw-r--r--. 1 boincer umatlas       620 Oct 13 07:36 runtime_log
[2025-10-13 07:36:18] -rw-------. 1 boincer umatlas   3932160 Oct 13 07:36 result.tar.gz
[2025-10-13 07:36:18] -rw-r--r--. 1 boincer umatlas      8706 Oct 13 07:36 runtime_log.err
[2025-10-13 07:36:18] -rw-------. 1 boincer umatlas       657 Oct 13 07:36 9PQNDmGhGS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOFlNDmXQ3PIo.diag
[2025-10-13 07:36:18] -rw-r--r--. 1 boincer umatlas     20751 Oct 13 07:36 stderr.txt
[2025-10-13 07:36:18] HITS file was successfully produced:
[2025-10-13 07:36:18] -rw-------. 1 boincer umatlas 201835844 Oct 13 07:28 shared/HITS.pool.root.1
[2025-10-13 07:36:18]  *** Contents of shared directory: ***
[2025-10-13 07:36:18] total 418392
[2025-10-13 07:36:18] -rw-r--r--. 2 boincer umatlas 222060753 Oct 13 00:04 ATLAS.root_0
[2025-10-13 07:36:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:04 start_atlas.sh
[2025-10-13 07:36:18] -rw-r--r--. 2 boincer umatlas    569684 Oct 13 00:04 input.tar.gz
[2025-10-13 07:36:18] -rw-------. 1 boincer umatlas 201835844 Oct 13 07:28 HITS.pool.root.1
[2025-10-13 07:36:18] -rw-------. 1 boincer umatlas   3932160 Oct 13 07:36 result.tar.gz
07:36:20 (2348583): run_atlas exited; CPU time 58082.746467
07:36:20 (2348583): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN