Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:25:21 (17959): wrapper (7.7.26015): starting
21:25:21 (17959): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 21:25:21] Arguments: --nthreads 8
[2025-10-12 21:25:21] Threads: 8
[2025-10-12 21:25:21] Checking for CVMFS
[2025-10-12 21:25:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 21:25:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 21:25:21] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 21:25:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 21:25:21] 2.11.2.0 11495 53678 129044 151643 0 57 17687638 18432001 1833 130560 0 49463170 99.976 2414269 27972 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 21:25:21] CVMFS is ok
[2025-10-12 21:25:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 21:25:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 21:25:21] Further information can be found at the LHC@home message board.
[2025-10-12 21:25:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:25:21] Checking for apptainer binary...
[2025-10-12 21:25:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 21:25:21] Running /usr/bin/apptainer --version
[2025-10-12 21:25:21] apptainer version 1.3.2-1.el7
[2025-10-12 21:25:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:25:22] c-206-31.aglt2.org
[2025-10-12 21:25:22] apptainer works
[2025-10-12 21:25:22] Set ATHENA_PROC_NUMBER=8
[2025-10-12 21:25:22] Set ATHENA_CORE_NUMBER=8
[2025-10-12 21:25:22] Starting ATLAS job with PandaID=6840429931
[2025-10-12 21:25:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 00:30:06]  *** The last 200 lines of the pilot log: ***
[2025-10-13 00:30:06] 2025-10-13 04:29:46,706 | INFO     | time since job start (11051s) is within the limit (172800.0s)
[2025-10-13 00:30:06] 2025-10-13 04:29:46,745 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 00:30:06] 2025-10-13 04:29:46,751 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2483.4583333333335
[2025-10-13 00:30:06] 2025-10-13 04:29:46,756 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6840429931/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 00:30:06] 2025-10-13 04:29:46,757 | INFO     | extracted standard info from prmon json
[2025-10-13 00:30:06] 2025-10-13 04:29:46,757 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 00:30:06] 2025-10-13 04:29:46,757 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 00:30:06] 2025-10-13 04:29:46,758 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 00:30:06] 2025-10-13 04:29:46,758 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 00:30:06] 2025-10-13 04:29:46,764 | INFO     | fitting pss+swap vs Time
[2025-10-13 00:30:06] 2025-10-13 04:29:46,764 | INFO     | sum of square deviations: 1838657730.0
[2025-10-13 00:30:06] 2025-10-13 04:29:46,766 | INFO     | sum of deviations: -7747604815.000002
[2025-10-13 00:30:06] 2025-10-13 04:29:46,766 | INFO     | mean x: 1760324252.0
[2025-10-13 00:30:06] 2025-10-13 04:29:46,766 | INFO     | mean y: 2513393.314917127
[2025-10-13 00:30:06] 2025-10-13 04:29:46,766 | INFO     | -- intersect: 7420042185.232311
[2025-10-13 00:30:06] 2025-10-13 04:29:46,766 | INFO     | intersect: 7420042185.232311
[2025-10-13 00:30:06] 2025-10-13 04:29:46,767 | INFO     | chi2: 1.5752861406275531
[2025-10-13 00:30:06] 2025-10-13 04:29:46,767 | INFO     | sum of square deviations: 1690450300.0
[2025-10-13 00:30:06] 2025-10-13 04:29:46,769 | INFO     | sum of deviations: -7405878270.499998
[2025-10-13 00:30:06] 2025-10-13 04:29:46,769 | INFO     | mean x: 1760324099.5
[2025-10-13 00:30:06] 2025-10-13 04:29:46,769 | INFO     | mean y: 2513746.1306818184
[2025-10-13 00:30:06] 2025-10-13 04:29:46,769 | INFO     | -- intersect: 7714509773.180117
[2025-10-13 00:30:06] 2025-10-13 04:29:46,770 | INFO     | intersect: 7714509773.180117
[2025-10-13 00:30:06] 2025-10-13 04:29:46,770 | INFO     | chi2: 1.5744897705741496
[2025-10-13 00:30:06] 2025-10-13 04:29:46,770 | INFO     | current chi2=1.5744897705741496 (change=0.05055399351677413 %)
[2025-10-13 00:30:06] 2025-10-13 04:29:46,770 | INFO     | right removable region: 175
[2025-10-13 00:30:06] 2025-10-13 04:29:46,771 | INFO     | sum of square deviations: 1690450300.0
[2025-10-13 00:30:06] 2025-10-13 04:29:46,772 | INFO     | sum of deviations: -33759216275.0
[2025-10-13 00:30:06] 2025-10-13 04:29:46,773 | INFO     | mean x: 1760324404.5
[2025-10-13 00:30:06] 2025-10-13 04:29:46,773 | INFO     | mean y: 2539808.5113636362
[2025-10-13 00:30:06] 2025-10-13 04:29:46,773 | INFO     | -- intersect: 35157180134.62807
[2025-10-13 00:30:06] 2025-10-13 04:29:46,773 | INFO     | intersect: 35157180134.62807
[2025-10-13 00:30:06] 2025-10-13 04:29:46,774 | INFO     | chi2: 0.1874981765196508
[2025-10-13 00:30:06] 2025-10-13 04:29:46,774 | INFO     | current chi2=0.1874981765196508 (change=88.09751627441116 %)
[2025-10-13 00:30:06] 2025-10-13 04:29:46,774 | INFO     | sum of square deviations: 1550429070.0
[2025-10-13 00:30:06] 2025-10-13 04:29:46,776 | INFO     | sum of deviations: -32692075260.0
[2025-10-13 00:30:06] 2025-10-13 04:29:46,776 | INFO     | mean x: 1760324557.0
[2025-10-13 00:30:06] 2025-10-13 04:29:46,776 | INFO     | mean y: 2538586.807017544
[2025-10-13 00:30:06] 2025-10-13 04:29:46,776 | INFO     | -- intersect: 37120433247.71541
[2025-10-13 00:30:06] 2025-10-13 04:29:46,776 | INFO     | intersect: 37120433247.71541
[2025-10-13 00:30:06] 2025-10-13 04:29:46,777 | INFO     | chi2: 0.1696930003264139
[2025-10-13 00:30:06] 2025-10-13 04:29:46,777 | INFO     | current chi2=0.1696930003264139 (change=9.496186322308487 %)
[2025-10-13 00:30:06] 2025-10-13 04:29:46,777 | INFO     | left removable region: 20
[2025-10-13 00:30:06] 2025-10-13 04:29:46,778 | INFO     | sum of square deviations: 1154663510.0
[2025-10-13 00:30:06] 2025-10-13 04:29:46,779 | INFO     | sum of deviations: -21302103226.999996
[2025-10-13 00:30:06] 2025-10-13 04:29:46,779 | INFO     | mean x: 1760324679.0
[2025-10-13 00:30:06] 2025-10-13 04:29:46,779 | INFO     | mean y: 2526851.0258064517
[2025-10-13 00:30:06] 2025-10-13 04:29:46,779 | INFO     | -- intersect: 32478324085.748875
[2025-10-13 00:30:06] 2025-10-13 04:29:46,780 | INFO     | intersect: 32478324085.748875
[2025-10-13 00:30:06] 2025-10-13 04:29:46,780 | INFO     | chi2: 0.14782889581040723
[2025-10-13 00:30:06] 2025-10-13 04:29:46,780 | INFO     | -- intersect: 32478324085.748875
[2025-10-13 00:30:06] 2025-10-13 04:29:46,780 | INFO     | current memory leak: -18.45 B/s (using 155 data points, chi2=0.15)
[2025-10-13 00:30:06] 2025-10-13 04:29:46,781 | INFO     | could have reported an average CPU frequency of 2541 MHz (10 samples)
[2025-10-13 00:30:06] 2025-10-13 04:29:46,781 | INFO     | ..............................
[2025-10-13 00:30:06] 2025-10-13 04:29:46,781 | INFO     | . Timing measurements:
[2025-10-13 00:30:06] 2025-10-13 04:29:46,781 | INFO     | . get job = 0 s
[2025-10-13 00:30:06] 2025-10-13 04:29:46,782 | INFO     | . initial setup = 2 s
[2025-10-13 00:30:06] 2025-10-13 04:29:46,782 | INFO     | . payload setup = 5 s
[2025-10-13 00:30:06] 2025-10-13 04:29:46,782 | INFO     | . stage-in = 0 s
[2025-10-13 00:30:06] 2025-10-13 04:29:46,782 | INFO     | . payload execution = 11015 s
[2025-10-13 00:30:06] 2025-10-13 04:29:46,782 | INFO     | . stage-out = 2 s
[2025-10-13 00:30:06] 2025-10-13 04:29:46,782 | INFO     | . log creation = 0 s
[2025-10-13 00:30:06] 2025-10-13 04:29:46,783 | INFO     | ..............................
[2025-10-13 00:30:06] 2025-10-13 04:29:46,901 | INFO     | 
[2025-10-13 00:30:06] 2025-10-13 04:29:46,901 | INFO     | job summary report
[2025-10-13 00:30:06] 2025-10-13 04:29:46,901 | INFO     | --------------------------------------------------
[2025-10-13 00:30:06] 2025-10-13 04:29:46,902 | INFO     | PanDA job id: 6840429931
[2025-10-13 00:30:06] 2025-10-13 04:29:46,902 | INFO     | task id: 46676269
[2025-10-13 00:30:06] 2025-10-13 04:29:46,902 | INFO     | errors: (none)
[2025-10-13 00:30:06] 2025-10-13 04:29:46,902 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 00:30:06] 2025-10-13 04:29:46,902 | INFO     | pilot state: finished 
[2025-10-13 00:30:06] 2025-10-13 04:29:46,902 | INFO     | transexitcode: 0
[2025-10-13 00:30:06] 2025-10-13 04:29:46,903 | INFO     | exeerrorcode: 0
[2025-10-13 00:30:06] 2025-10-13 04:29:46,903 | INFO     | exeerrordiag: 
[2025-10-13 00:30:06] 2025-10-13 04:29:46,903 | INFO     | exitcode: 0
[2025-10-13 00:30:06] 2025-10-13 04:29:46,903 | INFO     | exitmsg: OK
[2025-10-13 00:30:06] 2025-10-13 04:29:46,903 | INFO     | cpuconsumptiontime: 82657 s
[2025-10-13 00:30:06] 2025-10-13 04:29:46,903 | INFO     | nevents: 400
[2025-10-13 00:30:06] 2025-10-13 04:29:46,904 | INFO     | neventsw: 0
[2025-10-13 00:30:06] 2025-10-13 04:29:46,904 | INFO     | pid: 28847
[2025-10-13 00:30:06] 2025-10-13 04:29:46,904 | INFO     | pgrp: 28847
[2025-10-13 00:30:06] 2025-10-13 04:29:46,904 | INFO     | corecount: 8
[2025-10-13 00:30:06] 2025-10-13 04:29:46,904 | INFO     | event service: False
[2025-10-13 00:30:06] 2025-10-13 04:29:46,904 | INFO     | sizes: {0: 2348686, 1: 2348885, 4: 2349147, 11: 2349175, 11024: 2378421, 11026: 2387419, 11029: 2387603, 11035: 2387797}
[2025-10-13 00:30:06] 2025-10-13 04:29:46,905 | INFO     | --------------------------------------------------
[2025-10-13 00:30:06] 2025-10-13 04:29:46,905 | INFO     | 
[2025-10-13 00:30:06] 2025-10-13 04:29:46,905 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-13 00:30:06] 2025-10-13 04:29:46,933 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 00:30:06] 2025-10-13 04:29:46,934 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 00:30:06] 2025-10-13 04:29:46,934 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 00:30:06] 2025-10-13 04:29:46,934 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 00:30:06] 2025-10-13 04:29:46,934 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 00:30:06] 2025-10-13 04:29:46,935 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 00:30:06] 2025-10-13 04:29:46,935 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 00:30:06] 2025-10-13 04:29:46,935 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 00:30:06] 2025-10-13 04:29:46,935 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 00:30:06] 2025-10-13 04:29:46,935 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 00:30:06] 2025-10-13 04:29:46,936 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 00:30:06] 2025-10-13 04:29:46,936 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 00:30:06] 2025-10-13 04:29:46,936 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 00:30:06] 2025-10-13 04:29:46,936 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 00:30:06] 2025-10-13 04:29:46,936 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 00:30:06] 2025-10-13 04:29:46,937 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 00:30:06] 2025-10-13 04:29:46,937 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 00:30:06] 2025-10-13 04:29:46,937 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 00:30:06] 2025-10-13 04:29:46,937 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 00:30:06] 2025-10-13 04:29:46,937 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 00:30:06] 2025-10-13 04:29:46,938 | INFO     | job 6840429931 has completed (purged errors)
[2025-10-13 00:30:06] 2025-10-13 04:29:46,938 | INFO     | overall cleanup function is called
[2025-10-13 00:30:06] 2025-10-13 04:29:47,852 | INFO     | PID=22471 has CPU usage=10.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 00:30:06] 2025-10-13 04:29:47,853 | INFO     | .. there are 3 such processes running
[2025-10-13 00:30:06] 2025-10-13 04:29:47,946 | INFO     | --- collectZombieJob: --- 10, [28847]
[2025-10-13 00:30:06] 2025-10-13 04:29:47,946 | INFO     | zombie collector waiting for pid 28847
[2025-10-13 00:30:06] 2025-10-13 04:29:47,946 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 00:30:06] 2025-10-13 04:29:47,946 | INFO     | collected zombie processes
[2025-10-13 00:30:06] 2025-10-13 04:29:47,946 | INFO     | will attempt to kill all subprocesses of pid=28847
[2025-10-13 00:30:06] 2025-10-13 04:29:48,091 | INFO     | process IDs to be killed: [28847] (in reverse order)
[2025-10-13 00:30:06] 2025-10-13 04:29:48,145 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 00:30:06] 2025-10-13 04:29:48,146 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 00:30:06] 2025-10-13 04:29:48,152 | INFO     | did not find any defunct processes belonging to 28847
[2025-10-13 00:30:06] 2025-10-13 04:29:48,157 | INFO     | did not find any defunct processes belonging to 28847
[2025-10-13 00:30:06] 2025-10-13 04:29:48,157 | INFO     | ready for new job
[2025-10-13 00:30:06] 2025-10-13 04:29:48,157 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 00:30:06] 2025-10-13 04:29:48,159 | INFO     | ***************************************
[2025-10-13 00:30:06] 2025-10-13 04:29:48,160 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 00:30:06] 2025-10-13 04:29:48,160 | INFO     | ***************************************
[2025-10-13 00:30:06] 2025-10-13 04:29:48,160 | INFO     | 
[2025-10-13 00:30:06] 2025-10-13 04:29:48,161 | INFO     | architecture information:
[2025-10-13 00:30:06] 2025-10-13 04:29:48,162 | INFO     | executing command: cat /etc/os-release
[2025-10-13 00:30:06] 2025-10-13 04:29:48,177 | INFO     | cat /etc/os-release:
[2025-10-13 00:30:06] NAME="CentOS Linux"
[2025-10-13 00:30:06] VERSION="7 (Core)"
[2025-10-13 00:30:06] ID="centos"
[2025-10-13 00:30:06] ID_LIKE="rhel fedora"
[2025-10-13 00:30:06] VERSION_ID="7"
[2025-10-13 00:30:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 00:30:06] ANSI_COLOR="0;31"
[2025-10-13 00:30:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 00:30:06] HOME_URL="https://www.centos.org/"
[2025-10-13 00:30:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 00:30:06] 
[2025-10-13 00:30:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 00:30:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 00:30:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 00:30:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 00:30:06] 
[2025-10-13 00:30:06] 2025-10-13 04:29:48,177 | INFO     | ***************************************
[2025-10-13 00:30:06] 2025-10-13 04:29:48,680 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-13 00:30:06] 2025-10-13 04:29:48,826 | INFO     | sufficient remaining disk space (28080865280 B)
[2025-10-13 00:30:06] 2025-10-13 04:29:48,827 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 00:30:06] 2025-10-13 04:29:48,827 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 00:30:06] 2025-10-13 04:29:48,827 | INFO     | update_server=False
[2025-10-13 00:30:06] 2025-10-13 04:29:48,827 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 00:30:06] 2025-10-13 04:29:48,827 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 00:30:06] 2025-10-13 04:29:48,827 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:30:06] 2025-10-13 04:29:48,828 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 00:30:06] 2025-10-13 04:29:48,828 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 00:30:06] 2025-10-13 04:29:48,828 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 00:30:06] 2025-10-13 04:29:48,828 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 00:30:06] 2025-10-13 04:29:48,933 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:30:06] 2025-10-13 04:29:48,934 | INFO     | aborting loop
[2025-10-13 00:30:06] 2025-10-13 04:29:49,571 | INFO     | all data control threads have been joined
[2025-10-13 00:30:06] 2025-10-13 04:29:49,832 | INFO     | [job] retrieve thread has finished
[2025-10-13 00:30:06] 2025-10-13 04:29:49,833 | INFO     | [job] queue monitor thread has finished
[2025-10-13 00:30:06] 2025-10-13 04:29:49,898 | INFO     | [job] validate thread has finished
[2025-10-13 00:30:06] 2025-10-13 04:29:49,939 | INFO     | [job] job monitor thread has finished
[2025-10-13 00:30:06] 2025-10-13 04:29:50,009 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 00:30:06] 2025-10-13 04:29:50,026 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 00:30:06] 2025-10-13 04:29:50,065 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 00:30:06] 2025-10-13 04:29:50,148 | INFO     | all payload control threads have been joined
[2025-10-13 00:30:06] 2025-10-13 04:29:50,335 | INFO     | [payload] failed_post thread has finished
[2025-10-13 00:30:06] 2025-10-13 04:29:50,501 | INFO     | all job control threads have been joined
[2025-10-13 00:30:06] 2025-10-13 04:29:50,577 | INFO     | [data] control thread has finished
[2025-10-13 00:30:06] 2025-10-13 04:29:50,834 | INFO     | [data] copytool_out thread has finished
[2025-10-13 00:30:06] 2025-10-13 04:29:51,138 | INFO     | [payload] validate_post thread has finished
[2025-10-13 00:30:06] 2025-10-13 04:29:51,153 | INFO     | [payload] control thread has finished
[2025-10-13 00:30:06] 2025-10-13 04:29:51,160 | INFO     | [data] copytool_in thread has finished
[2025-10-13 00:30:06] 2025-10-13 04:29:51,507 | INFO     | [job] control thread has finished
[2025-10-13 00:30:06] 2025-10-13 04:29:51,661 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 00:30:06] 2025-10-13 04:29:52,987 | INFO     | [monitor] cgroup control has ended
[2025-10-13 00:30:06] 2025-10-13 04:29:55,667 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 00:30:06] 2025-10-13 04:29:59,711 | INFO     | job.realtimelogging is not enabled
[2025-10-13 00:30:06] 2025-10-13 04:30:00,716 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 00:30:06] 2025-10-13 04:30:01,593 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140041380869952)>', '<ExcThread(monitor, started 140040940275456)>']
[2025-10-13 00:30:06] 2025-10-13 04:30:01,893 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 00:30:06] 2025-10-13 04:30:01,893 | INFO     | [monitor] control thread has ended
[2025-10-13 00:30:06] 2025-10-13 04:30:06,619 | INFO     | all workflow threads have been joined
[2025-10-13 00:30:06] 2025-10-13 04:30:06,619 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 00:30:06] 2025-10-13 04:30:06,619 | INFO     | traces error code: 0
[2025-10-13 00:30:06] 2025-10-13 04:30:06,619 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 00:30:06] 2025-10-13 04:30:06,766 [wrapper] ==== pilot stdout END ====
[2025-10-13 00:30:06] 2025-10-13 04:30:06,769 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 00:30:06] 2025-10-13 04:30:06,771 [wrapper] pilotpid: 22471
[2025-10-13 00:30:06] 2025-10-13 04:30:06,774 [wrapper] Pilot exit status: 0
[2025-10-13 00:30:06] 2025-10-13 04:30:06,782 [wrapper] pandaids: 6840429931
[2025-10-13 00:30:06] 2025-10-13 04:30:06,827 [wrapper] cleanup supervisor_pilot 12985 22472
[2025-10-13 00:30:06] 2025-10-13 04:30:06,829 [wrapper] Test setup, not cleaning
[2025-10-13 00:30:06] 2025-10-13 04:30:06,832 [wrapper] apfmon messages muted
[2025-10-13 00:30:06] 2025-10-13 04:30:06,835 [wrapper] ==== wrapper stdout END ====
[2025-10-13 00:30:06] 2025-10-13 04:30:06,837 [wrapper] ==== wrapper stderr END ====
[2025-10-13 00:30:06]  *** Error codes and diagnostics ***
[2025-10-13 00:30:06]     "exeErrorCode": 0,
[2025-10-13 00:30:06]     "exeErrorDiag": "",
[2025-10-13 00:30:06]     "pilotErrorCode": 0,
[2025-10-13 00:30:06]     "pilotErrorDiag": "",
[2025-10-13 00:30:06]  *** Listing of results directory ***
[2025-10-13 00:30:06] total 416108
[2025-10-13 00:30:06] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 13:32 pilot3.tar.gz
[2025-10-13 00:30:06] -rwx------ 1 boincer umatlas     36292 Oct 12 13:38 runpilot2-wrapper.sh
[2025-10-13 00:30:06] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 13:38 queuedata.json
[2025-10-13 00:30:06] -rw-r--r-- 1 boincer umatlas       100 Oct 12 21:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 00:30:06] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 21:25 run_atlas
[2025-10-13 00:30:06] -rw-r--r-- 1 boincer umatlas       105 Oct 12 21:25 job.xml
[2025-10-13 00:30:06] -rw-r--r-- 2 boincer umatlas 224567397 Oct 12 21:25 EVNT.46676267._002414.pool.root.1
[2025-10-13 00:30:06] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 21:25 start_atlas.sh
[2025-10-13 00:30:06] drwxrwx--x 2 boincer umatlas      4096 Oct 12 21:25 shared
[2025-10-13 00:30:06] -rw-r--r-- 2 boincer umatlas    569675 Oct 12 21:25 input.tar.gz
[2025-10-13 00:30:06] -rw-r--r-- 1 boincer umatlas         0 Oct 12 21:25 boinc_lockfile
[2025-10-13 00:30:06] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 21:25 pandaJob.out
[2025-10-13 00:30:06] -rw------- 1 boincer umatlas    975595 Oct 12 21:25 agis_schedconf.cvmfs.json
[2025-10-13 00:30:06] drwx------ 5 boincer umatlas      4096 Oct 12 21:25 pilot3
[2025-10-13 00:30:06] -rw-r--r-- 1 boincer umatlas      5951 Oct 13 00:19 init_data.xml
[2025-10-13 00:30:06] -rw------- 1 boincer umatlas 193646635 Oct 13 00:29 HITS.46676269._085044.pool.root.1
[2025-10-13 00:30:06] -rw-r--r-- 1 boincer umatlas       531 Oct 13 00:29 boinc_task_state.xml
[2025-10-13 00:30:06] -rw------- 1 boincer umatlas        95 Oct 13 00:29 pilot_heartbeat.json
[2025-10-13 00:30:06] -rw------- 1 boincer umatlas      1067 Oct 13 00:29 memory_monitor_summary.json
[2025-10-13 00:30:06] -rw------- 1 boincer umatlas   1560580 Oct 13 00:29 agis_ddmendpoints.agis.ALL.json
[2025-10-13 00:30:06] -rw------- 1 boincer umatlas    431418 Oct 13 00:29 log.46676269._085044.job.log.tgz.1
[2025-10-13 00:30:06] -rw------- 1 boincer umatlas      7859 Oct 13 00:29 heartbeat.json
[2025-10-13 00:30:06] -rw-r--r-- 1 boincer umatlas        28 Oct 13 00:30 wrapper_checkpoint.txt
[2025-10-13 00:30:06] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 00:30 boinc_mmap_file
[2025-10-13 00:30:06] -rw------- 1 boincer umatlas      4624 Oct 13 00:30 pilotlog.txt
[2025-10-13 00:30:06] -rw------- 1 boincer umatlas   1552712 Oct 13 00:30 log.46676269._085044.job.log.1
[2025-10-13 00:30:06] -rw------- 1 boincer umatlas       357 Oct 13 00:30 output.list
[2025-10-13 00:30:06] -rw-r--r-- 1 boincer umatlas       620 Oct 13 00:30 runtime_log
[2025-10-13 00:30:06] -rw------- 1 boincer umatlas   2007040 Oct 13 00:30 result.tar.gz
[2025-10-13 00:30:06] -rw-r--r-- 1 boincer umatlas      8704 Oct 13 00:30 runtime_log.err
[2025-10-13 00:30:06] -rw------- 1 boincer umatlas       662 Oct 13 00:30 PTdLDmGDFS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmwYUMDmThqlLm.diag
[2025-10-13 00:30:06] -rw-r--r-- 1 boincer umatlas     21092 Oct 13 00:30 stderr.txt
[2025-10-13 00:30:06] HITS file was successfully produced:
[2025-10-13 00:30:06] -rw------- 1 boincer umatlas 193646635 Oct 13 00:29 shared/HITS.pool.root.1
[2025-10-13 00:30:06]  *** Contents of shared directory: ***
[2025-10-13 00:30:06] total 410960
[2025-10-13 00:30:06] -rw-r--r-- 2 boincer umatlas 224567397 Oct 12 21:25 ATLAS.root_0
[2025-10-13 00:30:06] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 21:25 start_atlas.sh
[2025-10-13 00:30:06] -rw-r--r-- 2 boincer umatlas    569675 Oct 12 21:25 input.tar.gz
[2025-10-13 00:30:06] -rw------- 1 boincer umatlas 193646635 Oct 13 00:29 HITS.pool.root.1
[2025-10-13 00:30:06] -rw------- 1 boincer umatlas   2007040 Oct 13 00:30 result.tar.gz
00:30:08 (17959): run_atlas exited; CPU time 82798.628773
00:30:08 (17959): called boinc_finish(0)

</stderr_txt>
]]>

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