Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:52 (987820): wrapper (7.7.26015): starting
00:01:52 (987820): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 00:01:52] Arguments: --nthreads 12
[2025-10-13 00:01:52] Threads: 12
[2025-10-13 00:01:52] Checking for CVMFS
[2025-10-13 00:01:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:01:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:01:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:01:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:01:55] 2.13.2.0 5065 113810 414276 151647 0 292 37824724 40960001 15428 16776704 2 191890388 99.752 121646187 37758 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 00:01:55] CVMFS is ok
[2025-10-13 00:01:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:01:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:01:55] Further information can be found at the LHC@home message board.
[2025-10-13 00:01:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:01:55] Checking for apptainer binary...
[2025-10-13 00:01:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:01:55] Running /usr/bin/apptainer --version
[2025-10-13 00:01:56] apptainer version 1.4.3-1.el9
[2025-10-13 00:01:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:01:57] c-206-35.aglt2.org
[2025-10-13 00:01:57] apptainer works
[2025-10-13 00:01:57] Set ATHENA_PROC_NUMBER=12
[2025-10-13 00:01:57] Set ATHENA_CORE_NUMBER=12
[2025-10-13 00:01:57] Starting ATLAS job with PandaID=6840750449
[2025-10-13 00:01:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:47:29]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:47:29] 2025-10-13 07:46:38,131 | INFO     | chi2: 1.2589552959557229
[2025-10-13 03:47:29] 2025-10-13 07:46:38,131 | INFO     | current chi2=1.2589552959557229 (change=-0.02278376569512854 %)
[2025-10-13 03:47:29] 2025-10-13 07:46:38,131 | INFO     | right removable region: 213
[2025-10-13 03:47:29] 2025-10-13 07:46:38,131 | INFO     | sum of square deviations: 3038959174.130848
[2025-10-13 03:47:29] 2025-10-13 07:46:38,132 | INFO     | sum of deviations: 9922408100.598124
[2025-10-13 03:47:29] 2025-10-13 07:46:38,135 | INFO     | mean x: 1760335026.906542
[2025-10-13 03:47:29] 2025-10-13 07:46:38,135 | INFO     | mean y: 2673521.929906542
[2025-10-13 03:47:29] 2025-10-13 07:46:38,135 | INFO     | -- intersect: -5744939897.634914
[2025-10-13 03:47:29] 2025-10-13 07:46:38,135 | INFO     | intersect: -5744939897.634914
[2025-10-13 03:47:29] 2025-10-13 07:46:38,135 | INFO     | chi2: 0.006992702779227205
[2025-10-13 03:47:29] 2025-10-13 07:46:38,135 | INFO     | current chi2=0.006992702779227205 (change=99.44443650996087 %)
[2025-10-13 03:47:29] 2025-10-13 07:46:38,136 | INFO     | sum of square deviations: 2830785283.6172338
[2025-10-13 03:47:29] 2025-10-13 07:46:38,137 | INFO     | sum of deviations: 8848915229.684216
[2025-10-13 03:47:29] 2025-10-13 07:46:38,137 | INFO     | mean x: 1760335179.444976
[2025-10-13 03:47:29] 2025-10-13 07:46:38,137 | INFO     | mean y: 2674324.8421052634
[2025-10-13 03:47:29] 2025-10-13 07:46:38,137 | INFO     | -- intersect: -5500059092.944663
[2025-10-13 03:47:29] 2025-10-13 07:46:38,137 | INFO     | intersect: -5500059092.944663
[2025-10-13 03:47:29] 2025-10-13 07:46:38,137 | INFO     | chi2: 0.003758159410254393
[2025-10-13 03:47:29] 2025-10-13 07:46:38,137 | INFO     | current chi2=0.003758159410254393 (change=46.25598243044839 %)
[2025-10-13 03:47:29] 2025-10-13 07:46:38,138 | INFO     | sum of square deviations: 2632319629.980389
[2025-10-13 03:47:29] 2025-10-13 07:46:38,139 | INFO     | sum of deviations: 6899405834.019607
[2025-10-13 03:47:29] 2025-10-13 07:46:38,139 | INFO     | mean x: 1760335331.990196
[2025-10-13 03:47:29] 2025-10-13 07:46:38,139 | INFO     | mean y: 2675822.5098039214
[2025-10-13 03:47:29] 2025-10-13 07:46:38,139 | INFO     | -- intersect: -4611227337.667778
[2025-10-13 03:47:29] 2025-10-13 07:46:38,139 | INFO     | intersect: -4611227337.667778
[2025-10-13 03:47:29] 2025-10-13 07:46:38,139 | INFO     | chi2: 0.00239179646172801
[2025-10-13 03:47:29] 2025-10-13 07:46:38,139 | INFO     | current chi2=0.00239179646172801 (change=36.357237662622005 %)
[2025-10-13 03:47:29] 2025-10-13 07:46:38,139 | INFO     | sum of square deviations: 2443380109.6482496
[2025-10-13 03:47:29] 2025-10-13 07:46:38,140 | INFO     | sum of deviations: 5231104906.346735
[2025-10-13 03:47:29] 2025-10-13 07:46:38,140 | INFO     | mean x: 1760335484.522613
[2025-10-13 03:47:29] 2025-10-13 07:46:38,140 | INFO     | mean y: 2677168.256281407
[2025-10-13 03:47:29] 2025-10-13 07:46:38,141 | INFO     | -- intersect: -3766077252.531796
[2025-10-13 03:47:29] 2025-10-13 07:46:38,141 | INFO     | intersect: -3766077252.531796
[2025-10-13 03:47:29] 2025-10-13 07:46:38,141 | INFO     | chi2: 0.0012731833655208055
[2025-10-13 03:47:29] 2025-10-13 07:46:38,141 | INFO     | current chi2=0.0012731833655208055 (change=46.76874115780888 %)
[2025-10-13 03:47:29] 2025-10-13 07:46:38,141 | INFO     | sum of square deviations: 2263768922.871129
[2025-10-13 03:47:29] 2025-10-13 07:46:38,142 | INFO     | sum of deviations: 4447228989.762884
[2025-10-13 03:47:29] 2025-10-13 07:46:38,142 | INFO     | mean x: 1760335637.0257733
[2025-10-13 03:47:29] 2025-10-13 07:46:38,142 | INFO     | mean y: 2677833.2474226803
[2025-10-13 03:47:29] 2025-10-13 07:46:38,142 | INFO     | -- intersect: -3455544248.344161
[2025-10-13 03:47:29] 2025-10-13 07:46:38,142 | INFO     | intersect: -3455544248.344161
[2025-10-13 03:47:29] 2025-10-13 07:46:38,143 | INFO     | chi2: 0.0011350127206247874
[2025-10-13 03:47:29] 2025-10-13 07:46:38,143 | INFO     | current chi2=0.0011350127206247874 (change=10.852375913621703 %)
[2025-10-13 03:47:29] 2025-10-13 07:46:38,143 | INFO     | left removable region: 50
[2025-10-13 03:47:29] 2025-10-13 07:46:38,143 | INFO     | sum of square deviations: 1342604232.1963117
[2025-10-13 03:47:29] 2025-10-13 07:46:38,144 | INFO     | sum of deviations: 957490663.8343554
[2025-10-13 03:47:29] 2025-10-13 07:46:38,144 | INFO     | mean x: 1760336216.5582821
[2025-10-13 03:47:29] 2025-10-13 07:46:38,144 | INFO     | mean y: 2680867.1226993864
[2025-10-13 03:47:29] 2025-10-13 07:46:38,144 | INFO     | -- intersect: -1252719236.7536283
[2025-10-13 03:47:29] 2025-10-13 07:46:38,144 | INFO     | intersect: -1252719236.7536283
[2025-10-13 03:47:29] 2025-10-13 07:46:38,144 | INFO     | chi2: 0.00018385744851407752
[2025-10-13 03:47:29] 2025-10-13 07:46:38,144 | INFO     | -- intersect: -1252719236.7536283
[2025-10-13 03:47:29] 2025-10-13 07:46:38,145 | INFO     | current memory leak: 0.71 B/s (using 163 data points, chi2=0.00)
[2025-10-13 03:47:29] 2025-10-13 07:46:38,145 | INFO     | could have reported an average CPU frequency of 3223 MHz (11 samples)
[2025-10-13 03:47:29] 2025-10-13 07:46:38,145 | INFO     | ..............................
[2025-10-13 03:47:29] 2025-10-13 07:46:38,145 | INFO     | . Timing measurements:
[2025-10-13 03:47:29] 2025-10-13 07:46:38,145 | INFO     | . get job = 0 s
[2025-10-13 03:47:29] 2025-10-13 07:46:38,145 | INFO     | . initial setup = 4 s
[2025-10-13 03:47:29] 2025-10-13 07:46:38,145 | INFO     | . payload setup = 11 s
[2025-10-13 03:47:29] 2025-10-13 07:46:38,145 | INFO     | . stage-in = 0 s
[2025-10-13 03:47:29] 2025-10-13 07:46:38,146 | INFO     | . payload execution = 13367 s
[2025-10-13 03:47:29] 2025-10-13 07:46:38,146 | INFO     | . stage-out = 1 s
[2025-10-13 03:47:29] 2025-10-13 07:46:38,146 | INFO     | . log creation = 0 s
[2025-10-13 03:47:29] 2025-10-13 07:46:38,146 | INFO     | ..............................
[2025-10-13 03:47:29] 2025-10-13 07:46:38,222 | INFO     | 
[2025-10-13 03:47:29] 2025-10-13 07:46:38,222 | INFO     | job summary report
[2025-10-13 03:47:29] 2025-10-13 07:46:38,223 | INFO     | --------------------------------------------------
[2025-10-13 03:47:29] 2025-10-13 07:46:38,223 | INFO     | PanDA job id: 6840750449
[2025-10-13 03:47:29] 2025-10-13 07:46:38,223 | INFO     | task id: 46676269
[2025-10-13 03:47:29] 2025-10-13 07:46:38,223 | INFO     | errors: (none)
[2025-10-13 03:47:29] 2025-10-13 07:46:38,223 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 03:47:29] 2025-10-13 07:46:38,223 | INFO     | pilot state: finished 
[2025-10-13 03:47:29] 2025-10-13 07:46:38,224 | INFO     | transexitcode: 0
[2025-10-13 03:47:29] 2025-10-13 07:46:38,224 | INFO     | exeerrorcode: 0
[2025-10-13 03:47:29] 2025-10-13 07:46:38,224 | INFO     | exeerrordiag: 
[2025-10-13 03:47:29] 2025-10-13 07:46:38,224 | INFO     | exitcode: 0
[2025-10-13 03:47:29] 2025-10-13 07:46:38,224 | INFO     | exitmsg: OK
[2025-10-13 03:47:29] 2025-10-13 07:46:38,224 | INFO     | cpuconsumptiontime: 36078 s
[2025-10-13 03:47:29] 2025-10-13 07:46:38,224 | INFO     | nevents: 400
[2025-10-13 03:47:29] 2025-10-13 07:46:38,224 | INFO     | neventsw: 0
[2025-10-13 03:47:29] 2025-10-13 07:46:38,224 | INFO     | pid: 1007896
[2025-10-13 03:47:29] 2025-10-13 07:46:38,224 | INFO     | pgrp: 1007896
[2025-10-13 03:47:29] 2025-10-13 07:46:38,224 | INFO     | corecount: 12
[2025-10-13 03:47:29] 2025-10-13 07:46:38,224 | INFO     | event service: False
[2025-10-13 03:47:29] 2025-10-13 07:46:38,224 | INFO     | sizes: {0: 2348851, 10: 2349113, 11: 2349141, 13383: 2379347, 13386: 2388401, 13396: 2388539}
[2025-10-13 03:47:29] 2025-10-13 07:46:38,224 | INFO     | --------------------------------------------------
[2025-10-13 03:47:29] 2025-10-13 07:46:38,224 | INFO     | 
[2025-10-13 03:47:29] 2025-10-13 07:46:38,224 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-13 03:47:29] 2025-10-13 07:46:38,247 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 03:47:29] 2025-10-13 07:46:38,248 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 03:47:29] 2025-10-13 07:46:38,248 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 03:47:29] 2025-10-13 07:46:38,248 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 03:47:29] 2025-10-13 07:46:38,248 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 03:47:29] 2025-10-13 07:46:38,248 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 03:47:29] 2025-10-13 07:46:38,248 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 03:47:29] 2025-10-13 07:46:38,248 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 03:47:29] 2025-10-13 07:46:38,248 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 03:47:29] 2025-10-13 07:46:38,248 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 03:47:29] 2025-10-13 07:46:38,248 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 03:47:29] 2025-10-13 07:46:38,248 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 03:47:29] 2025-10-13 07:46:38,248 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 03:47:29] 2025-10-13 07:46:38,248 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 03:47:29] 2025-10-13 07:46:38,248 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 03:47:29] 2025-10-13 07:46:38,248 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 03:47:29] 2025-10-13 07:46:38,249 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 03:47:29] 2025-10-13 07:46:38,249 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 03:47:29] 2025-10-13 07:46:38,249 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 03:47:29] 2025-10-13 07:46:38,249 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 03:47:29] 2025-10-13 07:46:38,249 | INFO     | job 6840750449 has completed (purged errors)
[2025-10-13 03:47:29] 2025-10-13 07:46:38,249 | INFO     | overall cleanup function is called
[2025-10-13 03:47:29] 2025-10-13 07:46:39,269 | INFO     | --- collectZombieJob: --- 10, [1007896]
[2025-10-13 03:47:29] 2025-10-13 07:46:39,269 | INFO     | zombie collector waiting for pid 1007896
[2025-10-13 03:47:29] 2025-10-13 07:46:39,269 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 03:47:29] 2025-10-13 07:46:39,269 | INFO     | collected zombie processes
[2025-10-13 03:47:29] 2025-10-13 07:46:39,269 | INFO     | will attempt to kill all subprocesses of pid=1007896
[2025-10-13 03:47:29] 2025-10-13 07:46:39,712 | INFO     | process IDs to be killed: [1007896] (in reverse order)
[2025-10-13 03:47:29] 2025-10-13 07:46:40,038 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 03:47:29] 2025-10-13 07:46:40,038 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 03:47:29] 2025-10-13 07:46:40,053 | INFO     | did not find any defunct processes belonging to 1007896
[2025-10-13 03:47:29] 2025-10-13 07:46:40,068 | INFO     | did not find any defunct processes belonging to 1007896
[2025-10-13 03:47:29] 2025-10-13 07:46:40,069 | INFO     | ready for new job
[2025-10-13 03:47:29] 2025-10-13 07:46:40,069 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 03:47:29] 2025-10-13 07:46:40,071 | INFO     | ***************************************
[2025-10-13 03:47:29] 2025-10-13 07:46:40,071 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 03:47:29] 2025-10-13 07:46:40,071 | INFO     | ***************************************
[2025-10-13 03:47:29] 2025-10-13 07:46:40,071 | INFO     | 
[2025-10-13 03:47:29] 2025-10-13 07:46:40,074 | INFO     | architecture information:
[2025-10-13 03:47:29] 2025-10-13 07:46:40,075 | INFO     | executing command: cat /etc/os-release
[2025-10-13 03:47:29] 2025-10-13 07:46:40,096 | INFO     | cat /etc/os-release:
[2025-10-13 03:47:29] NAME="CentOS Linux"
[2025-10-13 03:47:29] VERSION="7 (Core)"
[2025-10-13 03:47:29] ID="centos"
[2025-10-13 03:47:29] ID_LIKE="rhel fedora"
[2025-10-13 03:47:29] VERSION_ID="7"
[2025-10-13 03:47:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 03:47:29] ANSI_COLOR="0;31"
[2025-10-13 03:47:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 03:47:29] HOME_URL="https://www.centos.org/"
[2025-10-13 03:47:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 03:47:29] 
[2025-10-13 03:47:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 03:47:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 03:47:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 03:47:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 03:47:29] 
[2025-10-13 03:47:29] 2025-10-13 07:46:40,096 | INFO     | ***************************************
[2025-10-13 03:47:29] 2025-10-13 07:46:40,601 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-13 03:47:29] 2025-10-13 07:46:40,650 | INFO     | sufficient remaining disk space (83999326208 B)
[2025-10-13 03:47:29] 2025-10-13 07:46:40,650 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 03:47:29] 2025-10-13 07:46:40,650 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 03:47:29] 2025-10-13 07:46:40,650 | INFO     | update_server=False
[2025-10-13 03:47:29] 2025-10-13 07:46:40,650 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 03:47:29] 2025-10-13 07:46:40,651 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:47:29] 2025-10-13 07:46:40,651 | INFO     | aborting loop
[2025-10-13 03:47:29] 2025-10-13 07:46:40,654 | INFO     | all payload control threads have been joined
[2025-10-13 03:47:29] 2025-10-13 07:46:40,671 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 03:47:29] 2025-10-13 07:46:41,626 | INFO     | all data control threads have been joined
[2025-10-13 03:47:29] 2025-10-13 07:46:41,656 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:47:29] 2025-10-13 07:46:41,656 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:47:29] 2025-10-13 07:46:41,662 | INFO     | [payload] control thread has finished
[2025-10-13 03:47:29] 2025-10-13 07:46:41,953 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:47:29] 2025-10-13 07:46:42,027 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:47:29] 2025-10-13 07:46:42,075 | INFO     | all job control threads have been joined
[2025-10-13 03:47:29] 2025-10-13 07:46:42,294 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:47:29] 2025-10-13 07:46:42,632 | INFO     | [data] control thread has finished
[2025-10-13 03:47:29] 2025-10-13 07:46:42,649 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:47:29] 2025-10-13 07:46:42,677 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:47:29] 2025-10-13 07:46:42,743 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:47:29] 2025-10-13 07:46:42,767 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:47:29] 2025-10-13 07:46:42,808 | INFO     | [job] validate thread has finished
[2025-10-13 03:47:29] 2025-10-13 07:46:43,015 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:47:29] 2025-10-13 07:46:43,081 | INFO     | [job] control thread has finished
[2025-10-13 03:47:29] 2025-10-13 07:46:43,235 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:47:29] 2025-10-13 07:46:44,240 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:47:29] 2025-10-13 07:46:46,751 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:47:29] 2025-10-13 07:46:51,360 | INFO     | job.realtimelogging is not enabled
[2025-10-13 03:47:29] 2025-10-13 07:46:52,366 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:47:29] 2025-10-13 07:47:09,992 | INFO     | PID=994234 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 03:47:29] 2025-10-13 07:47:09,993 | INFO     | .. there are 12 such processes running
[2025-10-13 03:47:29] 2025-10-13 07:47:09,993 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:47:29] 2025-10-13 07:47:09,993 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:47:29] 2025-10-13 07:47:09,993 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:47:29] 2025-10-13 07:47:24,359 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:47:29] 2025-10-13 07:47:24,495 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140352633386816)>', '<ExcThread(monitor, started 140351989860096)>']
[2025-10-13 03:47:29] 2025-10-13 07:47:25,081 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:47:29] 2025-10-13 07:47:25,081 | INFO     | [monitor] control thread has ended
[2025-10-13 03:47:29] 2025-10-13 07:47:29,525 | INFO     | all workflow threads have been joined
[2025-10-13 03:47:29] 2025-10-13 07:47:29,525 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:47:29] 2025-10-13 07:47:29,525 | INFO     | traces error code: 0
[2025-10-13 03:47:29] 2025-10-13 07:47:29,525 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:47:29] 2025-10-13 07:47:29,644 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:47:29] 2025-10-13 07:47:29,647 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:47:29] 2025-10-13 07:47:29,649 [wrapper] pilotpid: 994234
[2025-10-13 03:47:29] 2025-10-13 07:47:29,652 [wrapper] Pilot exit status: 0
[2025-10-13 03:47:29] 2025-10-13 07:47:29,665 [wrapper] pandaids: 6840750449
[2025-10-13 03:47:29] 2025-10-13 07:47:29,741 [wrapper] cleanup supervisor_pilot 1306598 994235
[2025-10-13 03:47:29] 2025-10-13 07:47:29,744 [wrapper] Test setup, not cleaning
[2025-10-13 03:47:29] 2025-10-13 07:47:29,746 [wrapper] apfmon messages muted
[2025-10-13 03:47:29] 2025-10-13 07:47:29,748 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:47:29] 2025-10-13 07:47:29,751 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:47:29]  *** Error codes and diagnostics ***
[2025-10-13 03:47:29]     "exeErrorCode": 0,
[2025-10-13 03:47:29]     "exeErrorDiag": "",
[2025-10-13 03:47:29]     "pilotErrorCode": 0,
[2025-10-13 03:47:29]     "pilotErrorDiag": "",
[2025-10-13 03:47:29]  *** Listing of results directory ***
[2025-10-13 03:47:29] total 419768
[2025-10-13 03:47:29] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 17:12 pilot3.tar.gz
[2025-10-13 03:47:29] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 17:19 queuedata.json
[2025-10-13 03:47:29] -rwx------. 1 boincer umatlas     36292 Oct 12 17:20 runpilot2-wrapper.sh
[2025-10-13 03:47:29] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:47:29] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:01 run_atlas
[2025-10-13 03:47:29] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:01 job.xml
[2025-10-13 03:47:29] -rw-r--r--. 2 boincer umatlas 224181605 Oct 13 00:01 EVNT.46676267._004826.pool.root.1
[2025-10-13 03:47:29] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:01 start_atlas.sh
[2025-10-13 03:47:29] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:01 shared
[2025-10-13 03:47:29] -rw-r--r--. 2 boincer umatlas    569680 Oct 13 00:01 input.tar.gz
[2025-10-13 03:47:29] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:01 boinc_lockfile
[2025-10-13 03:47:29] -rw-r--r--. 1 boincer umatlas      2547 Oct 13 00:01 pandaJob.out
[2025-10-13 03:47:29] -rw-------. 1 boincer umatlas    974373 Oct 13 00:02 agis_schedconf.cvmfs.json
[2025-10-13 03:47:29] drwx------. 5 boincer umatlas      4096 Oct 13 00:03 pilot3
[2025-10-13 03:47:29] -rw-r--r--. 1 boincer umatlas      6900 Oct 13 03:39 init_data.xml
[2025-10-13 03:47:29] -rw-------. 1 boincer umatlas 197358516 Oct 13 03:45 HITS.46676269._089821.pool.root.1
[2025-10-13 03:47:29] -rw-r--r--. 1 boincer umatlas       531 Oct 13 03:45 boinc_task_state.xml
[2025-10-13 03:47:29] -rw-------. 1 boincer umatlas        95 Oct 13 03:46 pilot_heartbeat.json
[2025-10-13 03:47:29] -rw-------. 1 boincer umatlas      1030 Oct 13 03:46 memory_monitor_summary.json
[2025-10-13 03:47:29] -rw-------. 1 boincer umatlas   1560580 Oct 13 03:46 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:47:29] -rw-------. 1 boincer umatlas    486700 Oct 13 03:46 log.46676269._089821.job.log.tgz.1
[2025-10-13 03:47:29] -rw-------. 1 boincer umatlas      7776 Oct 13 03:46 heartbeat.json
[2025-10-13 03:47:29] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 03:47 boinc_mmap_file
[2025-10-13 03:47:29] -rw-r--r--. 1 boincer umatlas        28 Oct 13 03:47 wrapper_checkpoint.txt
[2025-10-13 03:47:29] -rw-------. 1 boincer umatlas      4895 Oct 13 03:47 pilotlog.txt
[2025-10-13 03:47:29] -rw-------. 1 boincer umatlas   1726092 Oct 13 03:47 log.46676269._089821.job.log.1
[2025-10-13 03:47:29] -rw-------. 1 boincer umatlas       357 Oct 13 03:47 output.list
[2025-10-13 03:47:29] -rw-r--r--. 1 boincer umatlas       620 Oct 13 03:47 runtime_log
[2025-10-13 03:47:29] -rw-------. 1 boincer umatlas   2232320 Oct 13 03:47 result.tar.gz
[2025-10-13 03:47:29] -rw-r--r--. 1 boincer umatlas      8706 Oct 13 03:47 runtime_log.err
[2025-10-13 03:47:29] -rw-------. 1 boincer umatlas       655 Oct 13 03:47 crmNDmkfIS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzdlNDmXpj0jn.diag
[2025-10-13 03:47:29] -rw-r--r--. 1 boincer umatlas      2147 Oct 13 03:47 stderr.txt
[2025-10-13 03:47:29] HITS file was successfully produced:
[2025-10-13 03:47:29] -rw-------. 1 boincer umatlas 197358516 Oct 13 03:45 shared/HITS.pool.root.1
[2025-10-13 03:47:29]  *** Contents of shared directory: ***
[2025-10-13 03:47:29] total 414424
[2025-10-13 03:47:29] -rw-r--r--. 2 boincer umatlas 224181605 Oct 13 00:01 ATLAS.root_0
[2025-10-13 03:47:29] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:01 start_atlas.sh
[2025-10-13 03:47:29] -rw-r--r--. 2 boincer umatlas    569680 Oct 13 00:01 input.tar.gz
[2025-10-13 03:47:29] -rw-------. 1 boincer umatlas 197358516 Oct 13 03:45 HITS.pool.root.1
[2025-10-13 03:47:29] -rw-------. 1 boincer umatlas   2232320 Oct 13 03:47 result.tar.gz
03:47:31 (987820): run_atlas exited; CPU time 36147.781236
03:47:31 (987820): called boinc_finish(0)

</stderr_txt>
]]>

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