Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
07:50:37 (2736694): wrapper (7.7.26015): starting
07:50:37 (2736694): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 07:50:37] Arguments: --nthreads 4
[2025-10-13 07:50:37] Threads: 4
[2025-10-13 07:50:37] Checking for CVMFS
[2025-10-13 07:50:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 07:50:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 07:50:37] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 07:50:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 07:50:37] 2.13.2.0 428253 5397 53156 151650 3 188 2277880 4096001 2766 130560 0 17608086 99.997 311720 2335 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-13 07:50:37] CVMFS is ok
[2025-10-13 07:50:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 07:50:37] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-13 07:50:37] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-13 07:50:37] Further information can be found at the LHC@home message board.
[2025-10-13 07:50:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 07:50:37] Checking for apptainer binary...
[2025-10-13 07:50:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 07:50:37] Running /usr/bin/apptainer --version
[2025-10-13 07:50:37] apptainer version 1.4.2
[2025-10-13 07:50:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 07:50:37] Ryzen-9-7950X3D-Zen4-Ubu24
[2025-10-13 07:50:37] apptainer works
[2025-10-13 07:50:37] Set ATHENA_PROC_NUMBER=4
[2025-10-13 07:50:37] Set ATHENA_CORE_NUMBER=4
[2025-10-13 07:50:37] Starting ATLAS job with PandaID=6840537949
[2025-10-13 07:50:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 09:13:58]  *** The last 200 lines of the pilot log: ***
[2025-10-13 09:13:58]  scope=mc23_13p6TeV
[2025-10-13 09:13:58]  status=None
[2025-10-13 09:13:58]  status_code=0
[2025-10-13 09:13:58]  storage_token=
[2025-10-13 09:13:58]  surl=/var/lib/boinc-client/slots/7/PanDA_Pilot-6840537949/log.46676269._086821.job.log.tgz.1
[2025-10-13 09:13:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8b/5e/log.46676269._086821.job.log.tgz.1
[2025-10-13 09:13:58]  workdir=None
[2025-10-13 09:13:58] ]
[2025-10-13 09:13:58] 2025-10-13 07:13:12,843 | INFO     | transferring file log.46676269._086821.job.log.tgz.1 from /var/lib/boinc-client/slots/7/PanDA_Pilot-6840537949/log.46676269._086821.job.log.tgz.1 to /var/lib/boinc
[2025-10-13 09:13:58] 2025-10-13 07:13:12,844 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/7/PanDA_Pilot-6840537949/log.46676269._086821.job.log.tgz.1 /var/lib/boinc-client/slots/7/log.466762
[2025-10-13 09:13:58] 2025-10-13 07:13:12,888 | INFO     | adding to output.list: log.46676269._086821.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8b/5e/log.46676269._086821.job.log.tg
[2025-10-13 09:13:58] 2025-10-13 07:13:12,888 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 09:13:58] 2025-10-13 07:13:12,888 | INFO     | summary of transferred files:
[2025-10-13 09:13:58] 2025-10-13 07:13:12,888 | INFO     |  -- lfn=log.46676269._086821.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 09:13:58] 2025-10-13 07:13:12,888 | INFO     | stage-out finished correctly
[2025-10-13 09:13:58] 2025-10-13 07:13:14,130 | INFO     | time since job start (4950s) is within the limit (172800.0s)
[2025-10-13 09:13:58] 2025-10-13 07:13:14,530 | INFO     | monitor loop #380: job 0:6840537949 is in state 'finished'
[2025-10-13 09:13:58] 2025-10-13 07:13:14,531 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 09:13:58] 2025-10-13 07:13:14,715 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 09:13:58] 2025-10-13 07:13:16,135 | INFO     | time since job start (4952s) is within the limit (172800.0s)
[2025-10-13 09:13:58] 2025-10-13 07:13:17,033 | INFO     | monitor loop #381: job 0:6840537949 is in state 'finished'
[2025-10-13 09:13:58] 2025-10-13 07:13:17,033 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 09:13:58] 2025-10-13 07:13:17,232 | INFO     | job 6840537949 has state=finished
[2025-10-13 09:13:58] 2025-10-13 07:13:17,233 | INFO     | preparing for final server update for job 6840537949 in state='finished'
[2025-10-13 09:13:58] 2025-10-13 07:13:17,233 | INFO     | this job has now completed (state=finished)
[2025-10-13 09:13:58] 2025-10-13 07:13:17,233 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 09:13:58] 2025-10-13 07:13:17,233 | INFO     | log transfer has been attempted: DONE
[2025-10-13 09:13:58] 2025-10-13 07:13:17,233 | INFO     | job 6840537949 has finished - writing final server update
[2025-10-13 09:13:58] 2025-10-13 07:13:17,233 | INFO     | total number of processed events: 400 (read)
[2025-10-13 09:13:58] 2025-10-13 07:13:17,237 | INFO     | executing command: lscpu
[2025-10-13 09:13:58] 2025-10-13 07:13:17,261 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 09:13:58] 2025-10-13 07:13:18,141 | INFO     | time since job start (4954s) is within the limit (172800.0s)
[2025-10-13 09:13:58] 2025-10-13 07:13:18,141 | INFO     | 4955s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-13 09:13:58] 2025-10-13 07:13:19,536 | INFO     | monitor loop #382: job 0:6840537949 is in state 'finished'
[2025-10-13 09:13:58] 2025-10-13 07:13:19,536 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 09:13:58] 2025-10-13 07:13:19,732 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 09:13:58] 2025-10-13 07:13:19,734 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4592.37684375
[2025-10-13 09:13:58] 2025-10-13 07:13:19,737 | INFO     | using path: /var/lib/boinc-client/slots/7/PanDA_Pilot-6840537949/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 09:13:58] 2025-10-13 07:13:19,737 | INFO     | extracted standard info from prmon json
[2025-10-13 09:13:58] 2025-10-13 07:13:19,737 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 09:13:58] 2025-10-13 07:13:19,737 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 09:13:58] 2025-10-13 07:13:19,737 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 09:13:58] 2025-10-13 07:13:19,737 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 09:13:58] 2025-10-13 07:13:19,738 | INFO     | fitting pss+swap vs Time
[2025-10-13 09:13:58] 2025-10-13 07:13:19,738 | INFO     | sum of square deviations: 125630262.5
[2025-10-13 09:13:58] 2025-10-13 07:13:19,738 | INFO     | sum of deviations: -6585540022.5
[2025-10-13 09:13:58] 2025-10-13 07:13:19,738 | INFO     | mean x: 1760337195.5
[2025-10-13 09:13:58] 2025-10-13 07:13:19,738 | INFO     | mean y: 2401450.608108108
[2025-10-13 09:13:58] 2025-10-13 07:13:19,738 | INFO     | -- intersect: 92279300530.24394
[2025-10-13 09:13:58] 2025-10-13 07:13:19,738 | INFO     | intersect: 92279300530.24394
[2025-10-13 09:13:58] 2025-10-13 07:13:19,738 | INFO     | chi2: 0.012206653813159348
[2025-10-13 09:13:58] 2025-10-13 07:13:19,738 | INFO     | -- intersect: 92279300530.24394
[2025-10-13 09:13:58] 2025-10-13 07:13:19,738 | INFO     | current memory leak: -52.42 B/s (using 74 data points, chi2=0.01)
[2025-10-13 09:13:58] 2025-10-13 07:13:19,739 | INFO     | could have reported an average CPU frequency of 4455 MHz (6 samples)
[2025-10-13 09:13:58] 2025-10-13 07:13:19,739 | INFO     | ..............................
[2025-10-13 09:13:58] 2025-10-13 07:13:19,739 | INFO     | . Timing measurements:
[2025-10-13 09:13:58] 2025-10-13 07:13:19,739 | INFO     | . get job = 0 s
[2025-10-13 09:13:58] 2025-10-13 07:13:19,739 | INFO     | . initial setup = 1 s
[2025-10-13 09:13:58] 2025-10-13 07:13:19,739 | INFO     | . payload setup = 3 s
[2025-10-13 09:13:58] 2025-10-13 07:13:19,739 | INFO     | . stage-in = 0 s
[2025-10-13 09:13:58] 2025-10-13 07:13:19,739 | INFO     | . payload execution = 4927 s
[2025-10-13 09:13:58] 2025-10-13 07:13:19,739 | INFO     | . stage-out = 0 s
[2025-10-13 09:13:58] 2025-10-13 07:13:19,739 | INFO     | . log creation = 0 s
[2025-10-13 09:13:58] 2025-10-13 07:13:19,739 | INFO     | ..............................
[2025-10-13 09:13:58] 2025-10-13 07:13:19,773 | INFO     | 
[2025-10-13 09:13:58] 2025-10-13 07:13:19,773 | INFO     | job summary report
[2025-10-13 09:13:58] 2025-10-13 07:13:19,773 | INFO     | --------------------------------------------------
[2025-10-13 09:13:58] 2025-10-13 07:13:19,773 | INFO     | PanDA job id: 6840537949
[2025-10-13 09:13:58] 2025-10-13 07:13:19,773 | INFO     | task id: 46676269
[2025-10-13 09:13:58] 2025-10-13 07:13:19,774 | INFO     | errors: (none)
[2025-10-13 09:13:58] 2025-10-13 07:13:19,774 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 09:13:58] 2025-10-13 07:13:19,774 | INFO     | pilot state: finished 
[2025-10-13 09:13:58] 2025-10-13 07:13:19,774 | INFO     | transexitcode: 0
[2025-10-13 09:13:58] 2025-10-13 07:13:19,774 | INFO     | exeerrorcode: 0
[2025-10-13 09:13:58] 2025-10-13 07:13:19,774 | INFO     | exeerrordiag: 
[2025-10-13 09:13:58] 2025-10-13 07:13:19,774 | INFO     | exitcode: 0
[2025-10-13 09:13:58] 2025-10-13 07:13:19,774 | INFO     | exitmsg: OK
[2025-10-13 09:13:58] 2025-10-13 07:13:19,774 | INFO     | cpuconsumptiontime: 19003 s
[2025-10-13 09:13:58] 2025-10-13 07:13:19,774 | INFO     | nevents: 400
[2025-10-13 09:13:58] 2025-10-13 07:13:19,774 | INFO     | neventsw: 0
[2025-10-13 09:13:58] 2025-10-13 07:13:19,774 | INFO     | pid: 2747191
[2025-10-13 09:13:58] 2025-10-13 07:13:19,774 | INFO     | pgrp: 2747191
[2025-10-13 09:13:58] 2025-10-13 07:13:19,774 | INFO     | corecount: 4
[2025-10-13 09:13:58] 2025-10-13 07:13:19,774 | INFO     | event service: False
[2025-10-13 09:13:58] 2025-10-13 07:13:19,774 | INFO     | sizes: {0: 2348864, 3: 2349126, 11: 2349154, 4935: 2375588, 4936: 2384600, 4938: 2384656, 4943: 2384978}
[2025-10-13 09:13:58] 2025-10-13 07:13:19,774 | INFO     | --------------------------------------------------
[2025-10-13 09:13:58] 2025-10-13 07:13:19,774 | INFO     | 
[2025-10-13 09:13:58] 2025-10-13 07:13:19,774 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/7
[2025-10-13 09:13:58] 2025-10-13 07:13:19,815 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 09:13:58] 2025-10-13 07:13:19,816 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 09:13:58] 2025-10-13 07:13:19,816 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 09:13:58] 2025-10-13 07:13:19,816 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 09:13:58] 2025-10-13 07:13:19,816 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 09:13:58] 2025-10-13 07:13:19,816 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 09:13:58] 2025-10-13 07:13:19,816 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 09:13:58] 2025-10-13 07:13:19,816 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 09:13:58] 2025-10-13 07:13:19,816 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 09:13:58] 2025-10-13 07:13:19,816 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 09:13:58] 2025-10-13 07:13:19,816 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 09:13:58] 2025-10-13 07:13:19,816 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 09:13:58] 2025-10-13 07:13:19,816 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 09:13:58] 2025-10-13 07:13:19,816 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 09:13:58] 2025-10-13 07:13:19,816 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 09:13:58] 2025-10-13 07:13:19,816 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 09:13:58] 2025-10-13 07:13:19,816 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 09:13:58] 2025-10-13 07:13:19,816 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 09:13:58] 2025-10-13 07:13:19,816 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 09:13:58] 2025-10-13 07:13:19,816 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 09:13:58] 2025-10-13 07:13:19,816 | INFO     | job 6840537949 has completed (purged errors)
[2025-10-13 09:13:58] 2025-10-13 07:13:19,816 | INFO     | overall cleanup function is called
[2025-10-13 09:13:58] 2025-10-13 07:13:20,822 | INFO     | --- collectZombieJob: --- 10, [2747191]
[2025-10-13 09:13:58] 2025-10-13 07:13:20,822 | INFO     | zombie collector waiting for pid 2747191
[2025-10-13 09:13:58] 2025-10-13 07:13:20,823 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 09:13:58] 2025-10-13 07:13:20,823 | INFO     | collected zombie processes
[2025-10-13 09:13:58] 2025-10-13 07:13:20,823 | INFO     | will attempt to kill all subprocesses of pid=2747191
[2025-10-13 09:13:58] 2025-10-13 07:13:20,892 | INFO     | process IDs to be killed: [2747191] (in reverse order)
[2025-10-13 09:13:58] 2025-10-13 07:13:20,956 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 09:13:58] 2025-10-13 07:13:20,956 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 09:13:58] 2025-10-13 07:13:20,958 | INFO     | did not find any defunct processes belonging to 2747191
[2025-10-13 09:13:58] 2025-10-13 07:13:20,960 | INFO     | did not find any defunct processes belonging to 2747191
[2025-10-13 09:13:58] 2025-10-13 07:13:20,960 | INFO     | ready for new job
[2025-10-13 09:13:58] 2025-10-13 07:13:20,961 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 09:13:58] 2025-10-13 07:13:20,961 | INFO     | ***************************************
[2025-10-13 09:13:58] 2025-10-13 07:13:20,962 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 09:13:58] 2025-10-13 07:13:20,962 | INFO     | ***************************************
[2025-10-13 09:13:58] 2025-10-13 07:13:20,962 | INFO     | 
[2025-10-13 09:13:58] 2025-10-13 07:13:20,963 | INFO     | architecture information:
[2025-10-13 09:13:58] 2025-10-13 07:13:20,964 | INFO     | executing command: cat /etc/os-release
[2025-10-13 09:13:58] 2025-10-13 07:13:20,977 | INFO     | cat /etc/os-release:
[2025-10-13 09:13:58] NAME="CentOS Linux"
[2025-10-13 09:13:58] VERSION="7 (Core)"
[2025-10-13 09:13:58] ID="centos"
[2025-10-13 09:13:58] ID_LIKE="rhel fedora"
[2025-10-13 09:13:58] VERSION_ID="7"
[2025-10-13 09:13:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 09:13:58] ANSI_COLOR="0;31"
[2025-10-13 09:13:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 09:13:58] HOME_URL="https://www.centos.org/"
[2025-10-13 09:13:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 09:13:58] 
[2025-10-13 09:13:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 09:13:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 09:13:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 09:13:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 09:13:58] 
[2025-10-13 09:13:58] 2025-10-13 07:13:20,977 | INFO     | ***************************************
[2025-10-13 09:13:58] 2025-10-13 07:13:21,479 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/7
[2025-10-13 09:13:58] 2025-10-13 07:13:21,497 | INFO     | sufficient remaining disk space (1766275940352 B)
[2025-10-13 09:13:58] 2025-10-13 07:13:21,497 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 09:13:58] 2025-10-13 07:13:21,497 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 09:13:58] 2025-10-13 07:13:21,497 | INFO     | update_server=False
[2025-10-13 09:13:58] 2025-10-13 07:13:21,497 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 09:13:58] 2025-10-13 07:13:21,497 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 09:13:58] 2025-10-13 07:13:21,497 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:13:58] 2025-10-13 07:13:21,498 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 09:13:58] 2025-10-13 07:13:21,498 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:13:58] 2025-10-13 07:13:21,498 | INFO     | aborting loop
[2025-10-13 09:13:58] 2025-10-13 07:13:21,927 | INFO     | all data control threads have been joined
[2025-10-13 09:13:58] 2025-10-13 07:13:22,287 | INFO     | all payload control threads have been joined
[2025-10-13 09:13:58] 2025-10-13 07:13:22,379 | INFO     | all job control threads have been joined
[2025-10-13 09:13:58] 2025-10-13 07:13:22,502 | INFO     | [job] job monitor thread has finished
[2025-10-13 09:13:58] 2025-10-13 07:13:22,503 | INFO     | [job] queue monitor thread has finished
[2025-10-13 09:13:58] 2025-10-13 07:13:22,503 | INFO     | [job] retrieve thread has finished
[2025-10-13 09:13:58] 2025-10-13 07:13:22,798 | INFO     | [job] validate thread has finished
[2025-10-13 09:13:58] 2025-10-13 07:13:22,862 | INFO     | [payload] validate_post thread has finished
[2025-10-13 09:13:58] 2025-10-13 07:13:22,931 | INFO     | [data] copytool_in thread has finished
[2025-10-13 09:13:58] 2025-10-13 07:13:22,932 | INFO     | [data] control thread has finished
[2025-10-13 09:13:58] 2025-10-13 07:13:23,229 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 09:13:58] 2025-10-13 07:13:23,259 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 09:13:58] 2025-10-13 07:13:23,290 | INFO     | [payload] control thread has finished
[2025-10-13 09:13:58] 2025-10-13 07:13:23,384 | INFO     | [job] control thread has finished
[2025-10-13 09:13:58] 2025-10-13 07:13:23,503 | INFO     | [data] copytool_out thread has finished
[2025-10-13 09:13:58] 2025-10-13 07:13:23,529 | INFO     | [payload] failed_post thread has finished
[2025-10-13 09:13:58] 2025-10-13 07:13:23,725 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 09:13:58] 2025-10-13 07:13:25,507 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 09:13:58] 2025-10-13 07:13:31,970 | INFO     | job.realtimelogging is not enabled
[2025-10-13 09:13:58] 2025-10-13 07:13:32,976 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 09:13:58] 2025-10-13 07:13:51,293 | INFO     | PID=2740545 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 09:13:58] 2025-10-13 07:13:51,294 | INFO     | .. there are 3 such processes running
[2025-10-13 09:13:58] 2025-10-13 07:13:51,294 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 09:13:58] 2025-10-13 07:13:51,294 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 09:13:58] 2025-10-13 07:13:51,294 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 09:13:58] 2025-10-13 07:13:51,764 | INFO     | [monitor] cgroup control has ended
[2025-10-13 09:13:58] 2025-10-13 07:13:52,835 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127371908966208)>', '<ExcThread(monitor, started 127371636086528)>']
[2025-10-13 09:13:58] 2025-10-13 07:13:53,300 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 09:13:58] 2025-10-13 07:13:53,300 | INFO     | [monitor] control thread has ended
[2025-10-13 09:13:58] 2025-10-13 07:13:57,859 | INFO     | all workflow threads have been joined
[2025-10-13 09:13:58] 2025-10-13 07:13:57,859 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 09:13:58] 2025-10-13 07:13:57,860 | INFO     | traces error code: 0
[2025-10-13 09:13:58] 2025-10-13 07:13:57,860 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 09:13:58] 2025-10-13 07:13:57,917 [wrapper] ==== pilot stdout END ====
[2025-10-13 09:13:58] 2025-10-13 07:13:57,921 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 09:13:58] 2025-10-13 07:13:57,922 [wrapper] pilotpid: 2740545
[2025-10-13 09:13:58] 2025-10-13 07:13:57,926 [wrapper] Pilot exit status: 0
[2025-10-13 09:13:58] 2025-10-13 07:13:57,934 [wrapper] pandaids: 6840537949
[2025-10-13 09:13:58] 2025-10-13 07:13:57,957 [wrapper] cleanup supervisor_pilot 2813115 2740546
[2025-10-13 09:13:58] 2025-10-13 07:13:57,961 [wrapper] Test setup, not cleaning
[2025-10-13 09:13:58] 2025-10-13 07:13:57,963 [wrapper] apfmon messages muted
[2025-10-13 09:13:58] 2025-10-13 07:13:57,964 [wrapper] ==== wrapper stdout END ====
[2025-10-13 09:13:58] 2025-10-13 07:13:57,965 [wrapper] ==== wrapper stderr END ====
[2025-10-13 09:13:58]  *** Error codes and diagnostics ***
[2025-10-13 09:13:58]     "exeErrorCode": 0,
[2025-10-13 09:13:58]     "exeErrorDiag": "",
[2025-10-13 09:13:58]     "pilotErrorCode": 0,
[2025-10-13 09:13:58]     "pilotErrorDiag": "",
[2025-10-13 09:13:58]  *** Listing of results directory ***
[2025-10-13 09:13:58] total 410580
[2025-10-13 09:13:58] -rw-r--r-- 1 boinc boinc    557409 Oct 12 20:53 pilot3.tar.gz
[2025-10-13 09:13:58] -rw-r--r-- 1 boinc boinc      5112 Oct 12 20:58 queuedata.json
[2025-10-13 09:13:58] -rwx------ 1 boinc boinc     36292 Oct 12 20:59 runpilot2-wrapper.sh
[2025-10-13 09:13:58] -rw-r--r-- 1 boinc boinc       100 Oct 13 07:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 09:13:58] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 07:50 run_atlas
[2025-10-13 09:13:58] -rw-r--r-- 1 boinc boinc       105 Oct 13 07:50 job.xml
[2025-10-13 09:13:58] -rw-r--r-- 2 boinc boinc 220604350 Oct 13 07:50 EVNT.46676267._004432.pool.root.1
[2025-10-13 09:13:58] -rw-r--r-- 2 boinc boinc     15120 Oct 13 07:50 start_atlas.sh
[2025-10-13 09:13:58] drwxrwx--x 2 boinc boinc      4096 Oct 13 07:50 shared
[2025-10-13 09:13:58] -rw-r--r-- 2 boinc boinc    569682 Oct 13 07:50 input.tar.gz
[2025-10-13 09:13:58] -rw-r--r-- 1 boinc boinc         0 Oct 13 07:50 boinc_lockfile
[2025-10-13 09:13:58] -rw-r--r-- 1 boinc boinc      2550 Oct 13 07:50 pandaJob.out
[2025-10-13 09:13:58] -rw------- 1 boinc boinc    973230 Oct 13 07:50 agis_schedconf.cvmfs.json
[2025-10-13 09:13:58] -rw------- 1 boinc boinc   1560580 Oct 13 07:50 agis_ddmendpoints.agis.ALL.json
[2025-10-13 09:13:58] drwx------ 5 boinc boinc      4096 Oct 13 07:50 pilot3
[2025-10-13 09:13:58] -rw-r--r-- 1 boinc boinc      9520 Oct 13 09:01 init_data.xml
[2025-10-13 09:13:58] -rw------- 1 boinc boinc 193869988 Oct 13 09:12 HITS.46676269._086821.pool.root.1
[2025-10-13 09:13:58] -rw-r--r-- 1 boinc boinc       529 Oct 13 09:12 boinc_task_state.xml
[2025-10-13 09:13:58] -rw------- 1 boinc boinc      1025 Oct 13 09:13 memory_monitor_summary.json
[2025-10-13 09:13:58] -rw------- 1 boinc boinc    278662 Oct 13 09:13 log.46676269._086821.job.log.tgz.1
[2025-10-13 09:13:58] -rw------- 1 boinc boinc        95 Oct 13 09:13 pilot_heartbeat.json
[2025-10-13 09:13:58] -rw------- 1 boinc boinc      7782 Oct 13 09:13 heartbeat.json
[2025-10-13 09:13:58] -rw-r--r-- 1 boinc boinc      8192 Oct 13 09:13 boinc_mmap_file
[2025-10-13 09:13:58] -rw-r--r-- 1 boinc boinc        27 Oct 13 09:13 wrapper_checkpoint.txt
[2025-10-13 09:13:58] -rw------- 1 boinc boinc      4904 Oct 13 09:13 pilotlog.txt
[2025-10-13 09:13:58] -rw------- 1 boinc boinc    748345 Oct 13 09:13 log.46676269._086821.job.log.1
[2025-10-13 09:13:58] -rw------- 1 boinc boinc       357 Oct 13 09:13 output.list
[2025-10-13 09:13:58] -rw-r--r-- 1 boinc boinc       620 Oct 13 09:13 runtime_log
[2025-10-13 09:13:58] -rw------- 1 boinc boinc   1044480 Oct 13 09:13 result.tar.gz
[2025-10-13 09:13:58] -rw-r--r-- 1 boinc boinc      8841 Oct 13 09:13 runtime_log.err
[2025-10-13 09:13:58] -rw------- 1 boinc boinc       656 Oct 13 09:13 QM5MDm0SGS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmajUMDmP66Emn.diag
[2025-10-13 09:13:58] -rw-r--r-- 1 boinc boinc     22014 Oct 13 09:13 stderr.txt
[2025-10-13 09:13:58] HITS file was successfully produced:
[2025-10-13 09:13:58] -rw------- 1 boinc boinc 193869988 Oct 13 09:12 shared/HITS.pool.root.1
[2025-10-13 09:13:58]  *** Contents of shared directory: ***
[2025-10-13 09:13:58] total 406368
[2025-10-13 09:13:58] -rw-r--r-- 2 boinc boinc 220604350 Oct 13 07:50 ATLAS.root_0
[2025-10-13 09:13:58] -rw-r--r-- 2 boinc boinc     15120 Oct 13 07:50 start_atlas.sh
[2025-10-13 09:13:58] -rw-r--r-- 2 boinc boinc    569682 Oct 13 07:50 input.tar.gz
[2025-10-13 09:13:58] -rw------- 1 boinc boinc 193869988 Oct 13 09:12 HITS.pool.root.1
[2025-10-13 09:13:58] -rw------- 1 boinc boinc   1044480 Oct 13 09:13 result.tar.gz
09:13:59 (2736694): run_atlas exited; CPU time 19021.410842
09:13:59 (2736694): called boinc_finish(0)

</stderr_txt>
]]>

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