Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:42:44 (229763): wrapper (7.7.26015): starting
21:42:44 (229763): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 21:42:44] Arguments: --nthreads 12
[2025-10-12 21:42:44] Threads: 12
[2025-10-12 21:42:44] Checking for CVMFS
[2025-10-12 21:42:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 21:42:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 21:42:44] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 21:42:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 21:42:44] 2.13.2.0 3683012 13582 149972 151643 2 195 38037544 40960000 4821 16776704 0 156825938 99.869 55098416 32595 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 21:42:44] CVMFS is ok
[2025-10-12 21:42:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 21:42:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 21:42:44] Further information can be found at the LHC@home message board.
[2025-10-12 21:42:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:42:44] Checking for apptainer binary...
[2025-10-12 21:42:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 21:42:44] Running /usr/bin/apptainer --version
[2025-10-12 21:42:44] apptainer version 1.4.3-1.el9
[2025-10-12 21:42:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:42:44] c8-7-4.aglt2.org
[2025-10-12 21:42:44] apptainer works
[2025-10-12 21:42:44] Set ATHENA_PROC_NUMBER=12
[2025-10-12 21:42:44] Set ATHENA_CORE_NUMBER=12
[2025-10-12 21:42:44] Starting ATLAS job with PandaID=6840430293
[2025-10-12 21:42:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:08:11]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:08:11]  status_code=0
[2025-10-12 22:08:11]  storage_token=
[2025-10-12 22:08:11]  surl=/tmp/boinchome/slots/8/PanDA_Pilot-6840430293/log.46676269._085249.job.log.tgz.1
[2025-10-12 22:08:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/56/ce/log.46676269._085249.job.log.tgz.1
[2025-10-12 22:08:11]  workdir=None
[2025-10-12 22:08:11] ]
[2025-10-12 22:08:11] 2025-10-13 02:07:32,783 | INFO     | transferring file log.46676269._085249.job.log.tgz.1 from /tmp/boinchome/slots/8/PanDA_Pilot-6840430293/log.46676269._085249.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 22:08:11] 2025-10-13 02:07:32,783 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/8/PanDA_Pilot-6840430293/log.46676269._085249.job.log.tgz.1 /tmp/boinchome/slots/8/log.46676269._085249.job
[2025-10-12 22:08:11] 2025-10-13 02:07:32,801 | INFO     | adding to output.list: log.46676269._085249.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/56/ce/log.46676269._085249.job.log.tg
[2025-10-12 22:08:11] 2025-10-13 02:07:32,802 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 22:08:11] 2025-10-13 02:07:32,802 | INFO     | summary of transferred files:
[2025-10-12 22:08:11] 2025-10-13 02:07:32,802 | INFO     |  -- lfn=log.46676269._085249.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 22:08:11] 2025-10-13 02:07:32,802 | INFO     | stage-out finished correctly
[2025-10-12 22:08:11] 2025-10-13 02:07:33,776 | INFO     | time since job start (1481s) is within the limit (172800.0s)
[2025-10-12 22:08:11] 2025-10-13 02:07:34,173 | INFO     | monitor loop #115: job 0:6840430293 is in state 'finished'
[2025-10-12 22:08:11] 2025-10-13 02:07:34,173 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:08:11] 2025-10-13 02:07:35,216 | INFO     | PID=233496 has CPU usage=9.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 22:08:11] 2025-10-13 02:07:35,217 | INFO     | .. there are 8 such processes running
[2025-10-12 22:08:11] 2025-10-13 02:07:35,691 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 22:08:11] 2025-10-13 02:07:36,217 | INFO     | time since job start (1484s) is within the limit (172800.0s)
[2025-10-12 22:08:11] 2025-10-13 02:07:36,409 | INFO     | job 6840430293 has state=finished
[2025-10-12 22:08:11] 2025-10-13 02:07:36,409 | INFO     | preparing for final server update for job 6840430293 in state='finished'
[2025-10-12 22:08:11] 2025-10-13 02:07:36,410 | INFO     | this job has now completed (state=finished)
[2025-10-12 22:08:11] 2025-10-13 02:07:36,410 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 22:08:11] 2025-10-13 02:07:36,410 | INFO     | log transfer has been attempted: DONE
[2025-10-12 22:08:11] 2025-10-13 02:07:36,410 | INFO     | job 6840430293 has finished - writing final server update
[2025-10-12 22:08:11] 2025-10-13 02:07:36,410 | INFO     | total number of processed events: 400 (read)
[2025-10-12 22:08:11] 2025-10-13 02:07:36,411 | INFO     | executing command: lscpu
[2025-10-12 22:08:11] 2025-10-13 02:07:36,474 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 22:08:11] 2025-10-13 02:07:36,677 | INFO     | monitor loop #116: job 0:6840430293 is in state 'finished'
[2025-10-12 22:08:11] 2025-10-13 02:07:36,677 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:08:11] 2025-10-13 02:07:38,223 | INFO     | time since job start (1486s) is within the limit (172800.0s)
[2025-10-12 22:08:11] 2025-10-13 02:07:39,180 | INFO     | monitor loop #117: job 0:6840430293 is in state 'finished'
[2025-10-12 22:08:11] 2025-10-13 02:07:39,180 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:08:11] 2025-10-13 02:07:39,710 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 22:08:11] 2025-10-13 02:07:39,727 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3563.846499999989
[2025-10-12 22:08:11] 2025-10-13 02:07:39,740 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6840430293/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 22:08:11] 2025-10-13 02:07:39,741 | INFO     | extracted standard info from prmon json
[2025-10-12 22:08:11] 2025-10-13 02:07:39,741 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 22:08:11] 2025-10-13 02:07:39,741 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 22:08:11] 2025-10-13 02:07:39,741 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 22:08:11] 2025-10-13 02:07:39,741 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:08:11] 2025-10-13 02:07:39,742 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:08:11] 2025-10-13 02:07:39,742 | INFO     | sum of square deviations: 1518168.0
[2025-10-12 22:08:11] 2025-10-13 02:07:39,742 | INFO     | sum of deviations: 62342610.0
[2025-10-12 22:08:11] 2025-10-13 02:07:39,742 | INFO     | mean x: 1760320585.0
[2025-10-12 22:08:11] 2025-10-13 02:07:39,742 | INFO     | mean y: 2438156.294117647
[2025-10-12 22:08:11] 2025-10-13 02:07:39,742 | INFO     | -- intersect: -72284014795.966
[2025-10-12 22:08:11] 2025-10-13 02:07:39,742 | INFO     | intersect: -72284014795.966
[2025-10-12 22:08:11] 2025-10-13 02:07:39,742 | INFO     | chi2: 0.00018265779967757226
[2025-10-12 22:08:11] 2025-10-13 02:07:39,743 | INFO     | -- intersect: -72284014795.966
[2025-10-12 22:08:11] 2025-10-13 02:07:39,743 | INFO     | current memory leak: 41.06 B/s (using 17 data points, chi2=0.00)
[2025-10-12 22:08:11] 2025-10-13 02:07:39,743 | INFO     | could have reported an average CPU frequency of 3491 MHz (4 samples)
[2025-10-12 22:08:11] 2025-10-13 02:07:39,743 | INFO     | ..............................
[2025-10-12 22:08:11] 2025-10-13 02:07:39,743 | INFO     | . Timing measurements:
[2025-10-12 22:08:11] 2025-10-13 02:07:39,743 | INFO     | . get job = 0 s
[2025-10-12 22:08:11] 2025-10-13 02:07:39,743 | INFO     | . initial setup = 2 s
[2025-10-12 22:08:11] 2025-10-13 02:07:39,743 | INFO     | . payload setup = 3 s
[2025-10-12 22:08:11] 2025-10-13 02:07:39,743 | INFO     | . stage-in = 0 s
[2025-10-12 22:08:11] 2025-10-13 02:07:39,743 | INFO     | . payload execution = 1459 s
[2025-10-12 22:08:11] 2025-10-13 02:07:39,743 | INFO     | . stage-out = 0 s
[2025-10-12 22:08:11] 2025-10-13 02:07:39,743 | INFO     | . log creation = 0 s
[2025-10-12 22:08:11] 2025-10-13 02:07:39,744 | INFO     | ..............................
[2025-10-12 22:08:11] 2025-10-13 02:07:39,891 | INFO     | 
[2025-10-12 22:08:11] 2025-10-13 02:07:39,891 | INFO     | job summary report
[2025-10-12 22:08:11] 2025-10-13 02:07:39,891 | INFO     | --------------------------------------------------
[2025-10-12 22:08:11] 2025-10-13 02:07:39,891 | INFO     | PanDA job id: 6840430293
[2025-10-12 22:08:11] 2025-10-13 02:07:39,891 | INFO     | task id: 46676269
[2025-10-12 22:08:11] 2025-10-13 02:07:39,891 | INFO     | errors: (none)
[2025-10-12 22:08:11] 2025-10-13 02:07:39,891 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:08:11] 2025-10-13 02:07:39,891 | INFO     | pilot state: finished 
[2025-10-12 22:08:11] 2025-10-13 02:07:39,892 | INFO     | transexitcode: 0
[2025-10-12 22:08:11] 2025-10-13 02:07:39,892 | INFO     | exeerrorcode: 0
[2025-10-12 22:08:11] 2025-10-13 02:07:39,892 | INFO     | exeerrordiag: 
[2025-10-12 22:08:11] 2025-10-13 02:07:39,892 | INFO     | exitcode: 0
[2025-10-12 22:08:11] 2025-10-13 02:07:39,892 | INFO     | exitmsg: OK
[2025-10-12 22:08:11] 2025-10-13 02:07:39,892 | INFO     | cpuconsumptiontime: 15583 s
[2025-10-12 22:08:11] 2025-10-13 02:07:39,892 | INFO     | nevents: 400
[2025-10-12 22:08:11] 2025-10-13 02:07:39,892 | INFO     | neventsw: 0
[2025-10-12 22:08:11] 2025-10-13 02:07:39,892 | INFO     | pid: 239936
[2025-10-12 22:08:11] 2025-10-13 02:07:39,892 | INFO     | pgrp: 239936
[2025-10-12 22:08:11] 2025-10-13 02:07:39,892 | INFO     | corecount: 12
[2025-10-12 22:08:11] 2025-10-13 02:07:39,892 | INFO     | event service: False
[2025-10-12 22:08:11] 2025-10-13 02:07:39,892 | INFO     | sizes: {0: 2348684, 1: 2348883, 3: 2349145, 11: 2349173, 1466: 2373983, 1467: 2382981, 1470: 2383165, 1474: 2383359}
[2025-10-12 22:08:11] 2025-10-13 02:07:39,892 | INFO     | --------------------------------------------------
[2025-10-12 22:08:11] 2025-10-13 02:07:39,892 | INFO     | 
[2025-10-12 22:08:11] 2025-10-13 02:07:39,892 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-10-12 22:08:11] 2025-10-13 02:07:39,905 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:08:11] 2025-10-13 02:07:39,905 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:08:11] 2025-10-13 02:07:39,905 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:08:11] 2025-10-13 02:07:39,905 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:08:11] 2025-10-13 02:07:39,906 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:08:11] 2025-10-13 02:07:39,906 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:08:11] 2025-10-13 02:07:39,906 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:08:11] 2025-10-13 02:07:39,906 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:08:11] 2025-10-13 02:07:39,906 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:08:11] 2025-10-13 02:07:39,906 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:08:11] 2025-10-13 02:07:39,906 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:08:11] 2025-10-13 02:07:39,906 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:08:11] 2025-10-13 02:07:39,906 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:08:11] 2025-10-13 02:07:39,906 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:08:11] 2025-10-13 02:07:39,906 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:08:11] 2025-10-13 02:07:39,906 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:08:11] 2025-10-13 02:07:39,906 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:08:11] 2025-10-13 02:07:39,906 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:08:11] 2025-10-13 02:07:39,906 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:08:11] 2025-10-13 02:07:39,906 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:08:11] 2025-10-13 02:07:39,906 | INFO     | job 6840430293 has completed (purged errors)
[2025-10-12 22:08:11] 2025-10-13 02:07:39,906 | INFO     | overall cleanup function is called
[2025-10-12 22:08:11] 2025-10-13 02:07:40,914 | INFO     | --- collectZombieJob: --- 10, [239936]
[2025-10-12 22:08:11] 2025-10-13 02:07:40,914 | INFO     | zombie collector waiting for pid 239936
[2025-10-12 22:08:11] 2025-10-13 02:07:40,914 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:08:11] 2025-10-13 02:07:40,914 | INFO     | collected zombie processes
[2025-10-12 22:08:11] 2025-10-13 02:07:40,914 | INFO     | will attempt to kill all subprocesses of pid=239936
[2025-10-12 22:08:11] 2025-10-13 02:07:41,246 | INFO     | process IDs to be killed: [239936] (in reverse order)
[2025-10-12 22:08:11] 2025-10-13 02:07:41,363 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:08:11] 2025-10-13 02:07:41,364 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:08:11] 2025-10-13 02:07:41,379 | INFO     | did not find any defunct processes belonging to 239936
[2025-10-12 22:08:11] 2025-10-13 02:07:41,393 | INFO     | did not find any defunct processes belonging to 239936
[2025-10-12 22:08:11] 2025-10-13 02:07:41,393 | INFO     | ready for new job
[2025-10-12 22:08:11] 2025-10-13 02:07:41,393 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:08:11] 2025-10-13 02:07:41,395 | INFO     | ***************************************
[2025-10-12 22:08:11] 2025-10-13 02:07:41,395 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:08:11] 2025-10-13 02:07:41,395 | INFO     | ***************************************
[2025-10-12 22:08:11] 2025-10-13 02:07:41,395 | INFO     | 
[2025-10-12 22:08:11] 2025-10-13 02:07:41,412 | INFO     | architecture information:
[2025-10-12 22:08:11] 2025-10-13 02:07:41,412 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:08:11] 2025-10-13 02:07:41,426 | INFO     | cat /etc/os-release:
[2025-10-12 22:08:11] NAME="CentOS Linux"
[2025-10-12 22:08:11] VERSION="7 (Core)"
[2025-10-12 22:08:11] ID="centos"
[2025-10-12 22:08:11] ID_LIKE="rhel fedora"
[2025-10-12 22:08:11] VERSION_ID="7"
[2025-10-12 22:08:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:08:11] ANSI_COLOR="0;31"
[2025-10-12 22:08:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:08:11] HOME_URL="https://www.centos.org/"
[2025-10-12 22:08:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:08:11] 
[2025-10-12 22:08:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:08:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:08:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:08:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:08:11] 
[2025-10-12 22:08:11] 2025-10-13 02:07:41,426 | INFO     | ***************************************
[2025-10-12 22:08:11] 2025-10-13 02:07:41,929 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-10-12 22:08:11] 2025-10-13 02:07:41,944 | INFO     | sufficient remaining disk space (167826685952 B)
[2025-10-12 22:08:11] 2025-10-13 02:07:41,945 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:08:11] 2025-10-13 02:07:41,945 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:08:11] 2025-10-13 02:07:41,945 | INFO     | update_server=False
[2025-10-12 22:08:11] 2025-10-13 02:07:41,945 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:08:11] 2025-10-13 02:07:41,945 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:08:11] 2025-10-13 02:07:42,415 | INFO     | all payload control threads have been joined
[2025-10-12 22:08:11] 2025-10-13 02:07:42,688 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:08:11] 2025-10-13 02:07:42,688 | INFO     | aborting loop
[2025-10-12 22:08:11] 2025-10-13 02:07:42,728 | INFO     | all data control threads have been joined
[2025-10-12 22:08:11] 2025-10-13 02:07:42,950 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:08:11] 2025-10-13 02:07:43,294 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:08:11] 2025-10-13 02:07:43,374 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:08:11] 2025-10-13 02:07:43,421 | INFO     | [payload] control thread has finished
[2025-10-12 22:08:11] 2025-10-13 02:07:43,588 | INFO     | all job control threads have been joined
[2025-10-12 22:08:11] 2025-10-13 02:07:43,627 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:08:11] 2025-10-13 02:07:43,694 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:08:11] 2025-10-13 02:07:43,733 | INFO     | [data] control thread has finished
[2025-10-12 22:08:11] 2025-10-13 02:07:43,834 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:08:11] 2025-10-13 02:07:43,908 | INFO     | [job] validate thread has finished
[2025-10-12 22:08:11] 2025-10-13 02:07:43,988 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:08:11] 2025-10-13 02:07:44,132 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:08:11] 2025-10-13 02:07:44,140 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:08:11] 2025-10-13 02:07:44,593 | INFO     | [job] control thread has finished
[2025-10-12 22:08:11] 2025-10-13 02:07:44,813 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:08:11] 2025-10-13 02:07:45,379 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:08:11] 2025-10-13 02:07:45,818 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:08:11] 2025-10-13 02:07:45,951 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:08:11] 2025-10-13 02:07:52,318 | INFO     | job.realtimelogging is not enabled
[2025-10-12 22:08:11] 2025-10-13 02:07:53,324 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:08:11] 2025-10-13 02:07:53,584 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:08:11] 2025-10-13 02:07:55,304 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139704128177984)>', '<ExcThread(monitor, started 139703768557312)>']
[2025-10-12 22:08:11] 2025-10-13 02:08:00,330 | INFO     | all workflow threads have been joined
[2025-10-12 22:08:11] 2025-10-13 02:08:00,330 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:08:11] 2025-10-13 02:08:00,330 | INFO     | traces error code: 0
[2025-10-12 22:08:11] 2025-10-13 02:08:00,330 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:08:11] 2025-10-13 02:08:11,712 | INFO     | PID=233496 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 22:08:11] 2025-10-13 02:08:11,713 | INFO     | .. there are 8 such processes running
[2025-10-12 22:08:11] 2025-10-13 02:08:11,713 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:08:11] 2025-10-13 02:08:11,713 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:08:11] 2025-10-13 02:08:11,713 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:08:11] 2025-10-13 02:08:11,713 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:08:11] 2025-10-13 02:08:11,713 | CRITICAL | thread 'MainThread' is not alive
[2025-10-12 22:08:11] 2025-10-13 02:08:11,713 | INFO     | [monitor] control thread has ended
[2025-10-12 22:08:11] 2025-10-13 02:08:11,799 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:08:11] 2025-10-13 02:08:11,801 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:08:11] 2025-10-13 02:08:11,804 [wrapper] pilotpid: 233496
[2025-10-12 22:08:11] 2025-10-13 02:08:11,806 [wrapper] Pilot exit status: 0
[2025-10-12 22:08:11] 2025-10-13 02:08:11,815 [wrapper] pandaids: 6840430293
[2025-10-12 22:08:11] 2025-10-13 02:08:11,902 [wrapper] cleanup supervisor_pilot  336411 233497
[2025-10-12 22:08:11] 2025-10-13 02:08:11,904 [wrapper] Test setup, not cleaning
[2025-10-12 22:08:11] 2025-10-13 02:08:11,907 [wrapper] apfmon messages muted
[2025-10-12 22:08:11] 2025-10-13 02:08:11,909 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:08:11] 2025-10-13 02:08:11,911 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:08:11]  *** Error codes and diagnostics ***
[2025-10-12 22:08:11]     "exeErrorCode": 0,
[2025-10-12 22:08:11]     "exeErrorDiag": "",
[2025-10-12 22:08:11]     "pilotErrorCode": 0,
[2025-10-12 22:08:11]     "pilotErrorDiag": "",
[2025-10-12 22:08:11]  *** Listing of results directory ***
[2025-10-12 22:08:11] total 405684
[2025-10-12 22:08:11] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 13:32 pilot3.tar.gz
[2025-10-12 22:08:11] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 13:48 queuedata.json
[2025-10-12 22:08:11] -rwx------. 1 boincer umatlas     36292 Oct 12 13:49 runpilot2-wrapper.sh
[2025-10-12 22:08:11] -rw-r--r--. 1 boincer umatlas       100 Oct 12 21:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:08:11] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 21:42 run_atlas
[2025-10-12 22:08:11] -rw-r--r--. 1 boincer umatlas       105 Oct 12 21:42 job.xml
[2025-10-12 22:08:11] -rw-r--r--. 2 boincer umatlas 219708015 Oct 12 21:42 EVNT.46676267._003603.pool.root.1
[2025-10-12 22:08:11] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 21:42 start_atlas.sh
[2025-10-12 22:08:11] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 21:42 shared
[2025-10-12 22:08:11] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 21:42 input.tar.gz
[2025-10-12 22:08:11] -rw-r--r--. 1 boincer umatlas         0 Oct 12 21:42 boinc_lockfile
[2025-10-12 22:08:11] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 21:42 pandaJob.out
[2025-10-12 22:08:11] -rw-------. 1 boincer umatlas    975595 Oct 12 21:42 agis_schedconf.cvmfs.json
[2025-10-12 22:08:11] -rw-------. 1 boincer umatlas   1560580 Oct 12 21:42 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:08:11] drwx------. 5 boincer umatlas      4096 Oct 12 21:42 pilot3
[2025-10-12 22:08:11] -rw-r--r--. 1 boincer umatlas      7164 Oct 12 22:02 init_data.xml
[2025-10-12 22:08:11] -rw-------. 1 boincer umatlas 190645491 Oct 12 22:07 HITS.46676269._085249.pool.root.1
[2025-10-12 22:08:11] -rw-r--r--. 1 boincer umatlas       529 Oct 12 22:07 boinc_task_state.xml
[2025-10-12 22:08:11] -rw-------. 1 boincer umatlas        95 Oct 12 22:07 pilot_heartbeat.json
[2025-10-12 22:08:11] -rw-------. 1 boincer umatlas      1029 Oct 12 22:07 memory_monitor_summary.json
[2025-10-12 22:08:11] -rw-------. 1 boincer umatlas    324476 Oct 12 22:07 log.46676269._085249.job.log.tgz.1
[2025-10-12 22:08:11] -rw-------. 1 boincer umatlas      7770 Oct 12 22:07 heartbeat.json
[2025-10-12 22:08:11] -rw-r--r--. 1 boincer umatlas        27 Oct 12 22:08 wrapper_checkpoint.txt
[2025-10-12 22:08:11] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 22:08 boinc_mmap_file
[2025-10-12 22:08:11] -rw-------. 1 boincer umatlas       891 Oct 12 22:08 pilotlog.txt
[2025-10-12 22:08:11] -rw-------. 1 boincer umatlas    255514 Oct 12 22:08 log.46676269._085249.job.log.1
[2025-10-12 22:08:11] -rw-------. 1 boincer umatlas       357 Oct 12 22:08 output.list
[2025-10-12 22:08:11] -rw-r--r--. 1 boincer umatlas       620 Oct 12 22:08 runtime_log
[2025-10-12 22:08:11] -rw-------. 1 boincer umatlas    604160 Oct 12 22:08 result.tar.gz
[2025-10-12 22:08:11] -rw-r--r--. 1 boincer umatlas      8695 Oct 12 22:08 runtime_log.err
[2025-10-12 22:08:11] -rw-------. 1 boincer umatlas       648 Oct 12 22:08 hl4LDmENFS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm5ZUMDmFrPWDn.diag
[2025-10-12 22:08:11] -rw-r--r--. 1 boincer umatlas     22119 Oct 12 22:08 stderr.txt
[2025-10-12 22:08:11] HITS file was successfully produced:
[2025-10-12 22:08:11] -rw-------. 1 boincer umatlas 190645491 Oct 12 22:07 shared/HITS.pool.root.1
[2025-10-12 22:08:11]  *** Contents of shared directory: ***
[2025-10-12 22:08:11] total 401912
[2025-10-12 22:08:11] -rw-r--r--. 2 boincer umatlas 219708015 Oct 12 21:42 ATLAS.root_0
[2025-10-12 22:08:11] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 21:42 start_atlas.sh
[2025-10-12 22:08:11] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 21:42 input.tar.gz
[2025-10-12 22:08:11] -rw-------. 1 boincer umatlas 190645491 Oct 12 22:07 HITS.pool.root.1
[2025-10-12 22:08:11] -rw-------. 1 boincer umatlas    604160 Oct 12 22:08 result.tar.gz
22:08:13 (229763): run_atlas exited; CPU time 15604.399980
22:08:13 (229763): called boinc_finish(0)

</stderr_txt>
]]>

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