Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:32 (1489111): wrapper (7.7.26015): starting
00:01:32 (1489111): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 00:01:32] Arguments: --nthreads 8
[2025-10-13 00:01:32] Threads: 8
[2025-10-13 00:01:32] Checking for CVMFS
[2025-10-13 00:01:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:01:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:01:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:01:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:01:35] 2.13.2.0 2408171 130179 266680 151647 0 274 17610109 32935937 24114 16776704 0 191825003 99.606 207972216 30485 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:01:35] CVMFS is ok
[2025-10-13 00:01:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:01:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:01:35] Further information can be found at the LHC@home message board.
[2025-10-13 00:01:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:01:35] Checking for apptainer binary...
[2025-10-13 00:01:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:01:35] Running /usr/bin/apptainer --version
[2025-10-13 00:01:35] apptainer version 1.4.3-1.el9
[2025-10-13 00:01:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:01:36] c6-5-7-3.aglt2.org
[2025-10-13 00:01:36] apptainer works
[2025-10-13 00:01:36] Set ATHENA_PROC_NUMBER=8
[2025-10-13 00:01:36] Set ATHENA_CORE_NUMBER=8
[2025-10-13 00:01:36] Starting ATLAS job with PandaID=6840749888
[2025-10-13 00:01:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 09:06:27]  *** The last 200 lines of the pilot log: ***
[2025-10-13 09:06:27] 2025-10-13 13:05:35,258 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 09:06:27] 2025-10-13 13:05:35,258 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 09:06:27] 2025-10-13 13:05:35,263 | INFO     | fitting pss+swap vs Time
[2025-10-13 09:06:27] 2025-10-13 13:05:35,263 | INFO     | sum of square deviations: 46423705997.664764
[2025-10-13 09:06:27] 2025-10-13 13:05:35,266 | INFO     | sum of deviations: 347435966264.3088
[2025-10-13 09:06:27] 2025-10-13 13:05:35,267 | INFO     | mean x: 1760344550.109228
[2025-10-13 09:06:27] 2025-10-13 13:05:35,267 | INFO     | mean y: 2069121.7532956686
[2025-10-13 09:06:27] 2025-10-13 13:05:35,267 | INFO     | -- intersect: -13172385536.305992
[2025-10-13 09:06:27] 2025-10-13 13:05:35,267 | INFO     | intersect: -13172385536.305992
[2025-10-13 09:06:27] 2025-10-13 13:05:35,267 | INFO     | chi2: 4.758276366294571
[2025-10-13 09:06:27] 2025-10-13 13:05:35,268 | INFO     | sum of square deviations: 45124726393.9544
[2025-10-13 09:06:27] 2025-10-13 13:05:35,271 | INFO     | sum of deviations: 374482404794.97766
[2025-10-13 09:06:27] 2025-10-13 13:05:35,271 | INFO     | mean x: 1760344397.619772
[2025-10-13 09:06:27] 2025-10-13 13:05:35,271 | INFO     | mean y: 2072271.3098859317
[2025-10-13 09:06:27] 2025-10-13 13:05:35,271 | INFO     | -- intersect: -14606725520.2339
[2025-10-13 09:06:27] 2025-10-13 13:05:35,271 | INFO     | intersect: -14606725520.2339
[2025-10-13 09:06:27] 2025-10-13 13:05:35,272 | INFO     | chi2: 4.098544914925478
[2025-10-13 09:06:27] 2025-10-13 13:05:35,272 | INFO     | current chi2=4.098544914925478 (change=13.864925039712395 %)
[2025-10-13 09:06:27] 2025-10-13 13:05:35,272 | INFO     | right removable region: 525
[2025-10-13 09:06:27] 2025-10-13 13:05:35,272 | INFO     | sum of square deviations: 45124367103.95439
[2025-10-13 09:06:27] 2025-10-13 13:05:35,275 | INFO     | sum of deviations: 221260967152.02634
[2025-10-13 09:06:27] 2025-10-13 13:05:35,276 | INFO     | mean x: 1760344702.619772
[2025-10-13 09:06:27] 2025-10-13 13:05:35,276 | INFO     | mean y: 2083916.0551330799
[2025-10-13 09:06:27] 2025-10-13 13:05:35,276 | INFO     | -- intersect: -8629517952.737928
[2025-10-13 09:06:27] 2025-10-13 13:05:35,276 | INFO     | intersect: -8629517952.737928
[2025-10-13 09:06:27] 2025-10-13 13:05:35,276 | INFO     | chi2: 1.7867019050150725
[2025-10-13 09:06:27] 2025-10-13 13:05:35,276 | INFO     | current chi2=1.7867019050150725 (change=62.450648775442254 %)
[2025-10-13 09:06:27] 2025-10-13 13:05:35,277 | INFO     | sum of square deviations: 43849558325.6391
[2025-10-13 09:06:27] 2025-10-13 13:05:35,280 | INFO     | sum of deviations: 154684392324.8771
[2025-10-13 09:06:27] 2025-10-13 13:05:35,280 | INFO     | mean x: 1760344855.1266794
[2025-10-13 09:06:27] 2025-10-13 13:05:35,280 | INFO     | mean y: 2091880.4261036469
[2025-10-13 09:06:27] 2025-10-13 13:05:35,280 | INFO     | -- intersect: -6207728345.705571
[2025-10-13 09:06:27] 2025-10-13 13:05:35,280 | INFO     | intersect: -6207728345.705571
[2025-10-13 09:06:27] 2025-10-13 13:05:35,280 | INFO     | chi2: 1.0613858909194431
[2025-10-13 09:06:27] 2025-10-13 13:05:35,281 | INFO     | current chi2=1.0613858909194431 (change=40.59524490681677 %)
[2025-10-13 09:06:27] 2025-10-13 13:05:35,281 | INFO     | sum of square deviations: 42599013854.038605
[2025-10-13 09:06:27] 2025-10-13 13:05:35,284 | INFO     | sum of deviations: 125628129681.51547
[2025-10-13 09:06:27] 2025-10-13 13:05:35,284 | INFO     | mean x: 1760345007.631783
[2025-10-13 09:06:27] 2025-10-13 13:05:35,284 | INFO     | mean y: 2095417.1027131784
[2025-10-13 09:06:27] 2025-10-13 13:05:35,284 | INFO     | -- intersect: -5189312338.502125
[2025-10-13 09:06:27] 2025-10-13 13:05:35,284 | INFO     | intersect: -5189312338.502125
[2025-10-13 09:06:27] 2025-10-13 13:05:35,285 | INFO     | chi2: 0.9196174631136081
[2025-10-13 09:06:27] 2025-10-13 13:05:35,285 | INFO     | current chi2=0.9196174631136081 (change=13.35691655774939 %)
[2025-10-13 09:06:27] 2025-10-13 13:05:35,285 | INFO     | left removable region: 30
[2025-10-13 09:06:27] 2025-10-13 13:05:35,285 | INFO     | sum of square deviations: 37606660517.52726
[2025-10-13 09:06:27] 2025-10-13 13:05:35,288 | INFO     | sum of deviations: 128787363993.2909
[2025-10-13 09:06:27] 2025-10-13 13:05:35,288 | INFO     | mean x: 1760345282.1454546
[2025-10-13 09:06:27] 2025-10-13 13:05:35,288 | INFO     | mean y: 2102204.5515151517
[2025-10-13 09:06:27] 2025-10-13 13:05:35,288 | INFO     | -- intersect: -6026357262.086759
[2025-10-13 09:06:27] 2025-10-13 13:05:35,288 | INFO     | intersect: -6026357262.086759
[2025-10-13 09:06:27] 2025-10-13 13:05:35,289 | INFO     | chi2: 0.23217341774947053
[2025-10-13 09:06:27] 2025-10-13 13:05:35,289 | INFO     | -- intersect: -6026357262.086759
[2025-10-13 09:06:27] 2025-10-13 13:05:35,289 | INFO     | current memory leak: 3.42 B/s (using 495 data points, chi2=0.23)
[2025-10-13 09:06:27] 2025-10-13 13:05:35,290 | INFO     | could have reported an average CPU frequency of 2839 MHz (21 samples)
[2025-10-13 09:06:27] 2025-10-13 13:05:35,290 | INFO     | ..............................
[2025-10-13 09:06:27] 2025-10-13 13:05:35,290 | INFO     | . Timing measurements:
[2025-10-13 09:06:27] 2025-10-13 13:05:35,290 | INFO     | . get job = 0 s
[2025-10-13 09:06:27] 2025-10-13 13:05:35,290 | INFO     | . initial setup = 11 s
[2025-10-13 09:06:27] 2025-10-13 13:05:35,290 | INFO     | . payload setup = 54 s
[2025-10-13 09:06:27] 2025-10-13 13:05:35,290 | INFO     | . stage-in = 0 s
[2025-10-13 09:06:27] 2025-10-13 13:05:35,290 | INFO     | . payload execution = 32372 s
[2025-10-13 09:06:27] 2025-10-13 13:05:35,290 | INFO     | . stage-out = 2 s
[2025-10-13 09:06:27] 2025-10-13 13:05:35,290 | INFO     | . log creation = 0 s
[2025-10-13 09:06:27] 2025-10-13 13:05:35,290 | INFO     | ..............................
[2025-10-13 09:06:27] 2025-10-13 13:05:35,290 | INFO     | time since job start (32540s) is within the limit (172800.0s)
[2025-10-13 09:06:27] 2025-10-13 13:05:35,821 | INFO     | 
[2025-10-13 09:06:27] 2025-10-13 13:05:35,821 | INFO     | job summary report
[2025-10-13 09:06:27] 2025-10-13 13:05:35,821 | INFO     | --------------------------------------------------
[2025-10-13 09:06:27] 2025-10-13 13:05:35,821 | INFO     | PanDA job id: 6840749888
[2025-10-13 09:06:27] 2025-10-13 13:05:35,821 | INFO     | task id: 46676269
[2025-10-13 09:06:27] 2025-10-13 13:05:35,822 | INFO     | errors: (none)
[2025-10-13 09:06:27] 2025-10-13 13:05:35,822 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 09:06:27] 2025-10-13 13:05:35,822 | INFO     | pilot state: finished 
[2025-10-13 09:06:27] 2025-10-13 13:05:35,822 | INFO     | transexitcode: 0
[2025-10-13 09:06:27] 2025-10-13 13:05:35,822 | INFO     | exeerrorcode: 0
[2025-10-13 09:06:27] 2025-10-13 13:05:35,822 | INFO     | exeerrordiag: 
[2025-10-13 09:06:27] 2025-10-13 13:05:35,822 | INFO     | exitcode: 0
[2025-10-13 09:06:27] 2025-10-13 13:05:35,822 | INFO     | exitmsg: OK
[2025-10-13 09:06:27] 2025-10-13 13:05:35,822 | INFO     | cpuconsumptiontime: 43979 s
[2025-10-13 09:06:27] 2025-10-13 13:05:35,822 | INFO     | nevents: 400
[2025-10-13 09:06:27] 2025-10-13 13:05:35,822 | INFO     | neventsw: 0
[2025-10-13 09:06:27] 2025-10-13 13:05:35,822 | INFO     | pid: 1530532
[2025-10-13 09:06:27] 2025-10-13 13:05:35,822 | INFO     | pgrp: 1530532
[2025-10-13 09:06:27] 2025-10-13 13:05:35,822 | INFO     | corecount: 8
[2025-10-13 09:06:27] 2025-10-13 13:05:35,822 | INFO     | event service: False
[2025-10-13 09:06:27] 2025-10-13 13:05:35,823 | INFO     | sizes: {0: 2348630, 1: 2348714, 2: 2348913, 13: 2348913, 24: 2348969, 35: 2348997, 46: 2349415, 47: 2349443, 58: 2349499, 32430: 2387738, 32431: 2387737, 32435: 23
[2025-10-13 09:06:27] 2025-10-13 13:05:35,823 | INFO     | --------------------------------------------------
[2025-10-13 09:06:27] 2025-10-13 13:05:35,823 | INFO     | 
[2025-10-13 09:06:27] 2025-10-13 13:05:35,823 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-13 09:06:27] 2025-10-13 13:05:35,844 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 09:06:27] 2025-10-13 13:05:35,845 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 09:06:27] 2025-10-13 13:05:35,845 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 09:06:27] 2025-10-13 13:05:35,845 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 09:06:27] 2025-10-13 13:05:35,845 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 09:06:27] 2025-10-13 13:05:35,845 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 09:06:27] 2025-10-13 13:05:35,845 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 09:06:27] 2025-10-13 13:05:35,845 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 09:06:27] 2025-10-13 13:05:35,845 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 09:06:27] 2025-10-13 13:05:35,846 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 09:06:27] 2025-10-13 13:05:35,846 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 09:06:27] 2025-10-13 13:05:35,846 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 09:06:27] 2025-10-13 13:05:35,846 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 09:06:27] 2025-10-13 13:05:35,846 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 09:06:27] 2025-10-13 13:05:35,846 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 09:06:27] 2025-10-13 13:05:35,846 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 09:06:27] 2025-10-13 13:05:35,846 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 09:06:27] 2025-10-13 13:05:35,847 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 09:06:27] 2025-10-13 13:05:35,847 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 09:06:27] 2025-10-13 13:05:35,847 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 09:06:27] 2025-10-13 13:05:35,847 | INFO     | job 6840749888 has completed (purged errors)
[2025-10-13 09:06:27] 2025-10-13 13:05:35,847 | INFO     | overall cleanup function is called
[2025-10-13 09:06:27] 2025-10-13 13:05:36,855 | INFO     | --- collectZombieJob: --- 10, [1530532]
[2025-10-13 09:06:27] 2025-10-13 13:05:36,855 | INFO     | zombie collector waiting for pid 1530532
[2025-10-13 09:06:27] 2025-10-13 13:05:36,855 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 09:06:27] 2025-10-13 13:05:36,855 | INFO     | collected zombie processes
[2025-10-13 09:06:27] 2025-10-13 13:05:36,855 | INFO     | will attempt to kill all subprocesses of pid=1530532
[2025-10-13 09:06:27] 2025-10-13 13:05:37,225 | INFO     | process IDs to be killed: [1530532] (in reverse order)
[2025-10-13 09:06:27] 2025-10-13 13:05:37,363 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 09:06:27] 2025-10-13 13:05:37,363 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 09:06:27] 2025-10-13 13:05:37,380 | INFO     | did not find any defunct processes belonging to 1530532
[2025-10-13 09:06:27] 2025-10-13 13:05:37,398 | INFO     | did not find any defunct processes belonging to 1530532
[2025-10-13 09:06:27] 2025-10-13 13:05:37,398 | INFO     | ready for new job
[2025-10-13 09:06:27] 2025-10-13 13:05:37,398 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 09:06:27] 2025-10-13 13:05:37,401 | INFO     | ***************************************
[2025-10-13 09:06:27] 2025-10-13 13:05:37,403 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 09:06:27] 2025-10-13 13:05:37,403 | INFO     | ***************************************
[2025-10-13 09:06:27] 2025-10-13 13:05:37,403 | INFO     | 
[2025-10-13 09:06:27] 2025-10-13 13:05:37,419 | INFO     | architecture information:
[2025-10-13 09:06:27] 2025-10-13 13:05:37,419 | INFO     | executing command: cat /etc/os-release
[2025-10-13 09:06:27] 2025-10-13 13:05:37,441 | INFO     | cat /etc/os-release:
[2025-10-13 09:06:27] NAME="CentOS Linux"
[2025-10-13 09:06:27] VERSION="7 (Core)"
[2025-10-13 09:06:27] ID="centos"
[2025-10-13 09:06:27] ID_LIKE="rhel fedora"
[2025-10-13 09:06:27] VERSION_ID="7"
[2025-10-13 09:06:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 09:06:27] ANSI_COLOR="0;31"
[2025-10-13 09:06:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 09:06:27] HOME_URL="https://www.centos.org/"
[2025-10-13 09:06:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 09:06:27] 
[2025-10-13 09:06:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 09:06:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 09:06:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 09:06:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 09:06:27] 
[2025-10-13 09:06:27] 2025-10-13 13:05:37,442 | INFO     | ***************************************
[2025-10-13 09:06:27] 2025-10-13 13:05:37,944 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-13 09:06:27] 2025-10-13 13:05:37,962 | INFO     | sufficient remaining disk space (76079431680 B)
[2025-10-13 09:06:27] 2025-10-13 13:05:37,962 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 09:06:27] 2025-10-13 13:05:37,962 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 09:06:27] 2025-10-13 13:05:37,962 | INFO     | update_server=False
[2025-10-13 09:06:27] 2025-10-13 13:05:37,962 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 09:06:27] 2025-10-13 13:05:37,963 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 09:06:27] 2025-10-13 13:05:37,963 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 09:06:27] 2025-10-13 13:05:37,963 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:06:27] 2025-10-13 13:05:37,963 | INFO     | aborting loop
[2025-10-13 09:06:27] 2025-10-13 13:05:38,150 | INFO     | all data control threads have been joined
[2025-10-13 09:06:27] 2025-10-13 13:05:38,375 | INFO     | all job control threads have been joined
[2025-10-13 09:06:27] 2025-10-13 13:05:38,456 | INFO     | all payload control threads have been joined
[2025-10-13 09:06:27] 2025-10-13 13:05:38,968 | INFO     | [job] retrieve thread has finished
[2025-10-13 09:06:27] 2025-10-13 13:05:38,969 | INFO     | [job] job monitor thread has finished
[2025-10-13 09:06:27] 2025-10-13 13:05:39,034 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 09:06:27] 2025-10-13 13:05:39,156 | INFO     | [data] control thread has finished
[2025-10-13 09:06:27] 2025-10-13 13:05:39,343 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 09:06:27] 2025-10-13 13:05:39,381 | INFO     | [job] control thread has finished
[2025-10-13 09:06:27] 2025-10-13 13:05:39,462 | INFO     | [payload] control thread has finished
[2025-10-13 09:06:27] 2025-10-13 13:05:39,500 | INFO     | [payload] validate_post thread has finished
[2025-10-13 09:06:27] 2025-10-13 13:05:39,871 | INFO     | [job] validate thread has finished
[2025-10-13 09:06:27] 2025-10-13 13:05:39,900 | INFO     | [payload] failed_post thread has finished
[2025-10-13 09:06:27] 2025-10-13 13:05:39,978 | INFO     | [data] copytool_out thread has finished
[2025-10-13 09:06:27] 2025-10-13 13:05:40,041 | INFO     | [data] copytool_in thread has finished
[2025-10-13 09:06:27] 2025-10-13 13:05:40,083 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 09:06:27] 2025-10-13 13:05:40,288 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 09:06:27] 2025-10-13 13:05:40,395 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:06:27] 2025-10-13 13:05:41,401 | INFO     | [job] queue monitor thread has finished
[2025-10-13 09:06:27] 2025-10-13 13:05:41,970 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 09:06:27] 2025-10-13 13:06:08,695 | INFO     | PID=1499142 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 09:06:27] 2025-10-13 13:06:08,696 | INFO     | .. there are 26 such processes running
[2025-10-13 09:06:27] 2025-10-13 13:06:08,696 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 09:06:27] 2025-10-13 13:06:08,696 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 09:06:27] 2025-10-13 13:06:08,696 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 09:06:27] 2025-10-13 13:06:21,183 | INFO     | [monitor] cgroup control has ended
[2025-10-13 09:06:27] 2025-10-13 13:06:22,339 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140214571140928)>', '<ExcThread(monitor, started 140214055966464)>']
[2025-10-13 09:06:27] 2025-10-13 13:06:22,769 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 09:06:27] 2025-10-13 13:06:22,769 | INFO     | [monitor] control thread has ended
[2025-10-13 09:06:27] 2025-10-13 13:06:27,364 | INFO     | all workflow threads have been joined
[2025-10-13 09:06:27] 2025-10-13 13:06:27,364 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 09:06:27] 2025-10-13 13:06:27,365 | INFO     | traces error code: 0
[2025-10-13 09:06:27] 2025-10-13 13:06:27,365 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 09:06:27] 2025-10-13 13:06:27,535 [wrapper] ==== pilot stdout END ====
[2025-10-13 09:06:27] 2025-10-13 13:06:27,539 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 09:06:27] 2025-10-13 13:06:27,542 [wrapper] pilotpid: 1499142
[2025-10-13 09:06:27] 2025-10-13 13:06:27,545 [wrapper] Pilot exit status: 0
[2025-10-13 09:06:27] 2025-10-13 13:06:27,555 [wrapper] pandaids: 6840749888
[2025-10-13 09:06:27] 2025-10-13 13:06:27,616 [wrapper] cleanup supervisor_pilot 3450988 1499143
[2025-10-13 09:06:27] 2025-10-13 13:06:27,620 [wrapper] Test setup, not cleaning
[2025-10-13 09:06:27] 2025-10-13 13:06:27,624 [wrapper] apfmon messages muted
[2025-10-13 09:06:27] 2025-10-13 13:06:27,627 [wrapper] ==== wrapper stdout END ====
[2025-10-13 09:06:27] 2025-10-13 13:06:27,630 [wrapper] ==== wrapper stderr END ====
[2025-10-13 09:06:27]  *** Error codes and diagnostics ***
[2025-10-13 09:06:27]     "exeErrorCode": 0,
[2025-10-13 09:06:27]     "exeErrorDiag": "",
[2025-10-13 09:06:27]     "pilotErrorCode": 0,
[2025-10-13 09:06:27]     "pilotErrorDiag": "",
[2025-10-13 09:06:27]  *** Listing of results directory ***
[2025-10-13 09:06:27] total 420704
[2025-10-13 09:06:27] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 16:55 pilot3.tar.gz
[2025-10-13 09:06:27] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 16:59 queuedata.json
[2025-10-13 09:06:27] -rwx------. 1 boincer umatlas     36292 Oct 12 17:00 runpilot2-wrapper.sh
[2025-10-13 09:06:27] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 09:06:27] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:01 run_atlas
[2025-10-13 09:06:27] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:01 job.xml
[2025-10-13 09:06:27] -rw-r--r--. 2 boincer umatlas 222598861 Oct 13 00:01 EVNT.46676267._004762.pool.root.1
[2025-10-13 09:06:27] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:01 start_atlas.sh
[2025-10-13 09:06:27] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:01 shared
[2025-10-13 09:06:27] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 00:01 input.tar.gz
[2025-10-13 09:06:27] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:01 boinc_lockfile
[2025-10-13 09:06:27] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:01 pandaJob.out
[2025-10-13 09:06:27] -rw-------. 1 boincer umatlas    974373 Oct 13 00:03 agis_schedconf.cvmfs.json
[2025-10-13 09:06:27] drwx------. 5 boincer umatlas      4096 Oct 13 00:03 pilot3
[2025-10-13 09:06:27] -rw-r--r--. 1 boincer umatlas      6843 Oct 13 09:04 init_data.xml
[2025-10-13 09:06:27] -rw-------. 1 boincer umatlas 195719947 Oct 13 09:04 HITS.46676269._089316.pool.root.1
[2025-10-13 09:06:27] -rw-r--r--. 1 boincer umatlas       531 Oct 13 09:04 boinc_task_state.xml
[2025-10-13 09:06:27] -rw-------. 1 boincer umatlas      1056 Oct 13 09:05 memory_monitor_summary.json
[2025-10-13 09:06:27] -rw-------. 1 boincer umatlas   1560580 Oct 13 09:05 agis_ddmendpoints.agis.ALL.json
[2025-10-13 09:06:27] -rw-------. 1 boincer umatlas    673172 Oct 13 09:05 log.46676269._089316.job.log.tgz.1
[2025-10-13 09:06:27] -rw-------. 1 boincer umatlas        95 Oct 13 09:05 pilot_heartbeat.json
[2025-10-13 09:06:27] -rw-------. 1 boincer umatlas      7829 Oct 13 09:05 heartbeat.json
[2025-10-13 09:06:27] -rw-r--r--. 1 boincer umatlas        28 Oct 13 09:06 wrapper_checkpoint.txt
[2025-10-13 09:06:27] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 09:06 boinc_mmap_file
[2025-10-13 09:06:27] -rw-------. 1 boincer umatlas      4824 Oct 13 09:06 pilotlog.txt
[2025-10-13 09:06:27] -rw-------. 1 boincer umatlas   3616100 Oct 13 09:06 log.46676269._089316.job.log.1
[2025-10-13 09:06:27] -rw-------. 1 boincer umatlas       357 Oct 13 09:06 output.list
[2025-10-13 09:06:27] -rw-r--r--. 1 boincer umatlas       620 Oct 13 09:06 runtime_log
[2025-10-13 09:06:27] -rw-------. 1 boincer umatlas   4311040 Oct 13 09:06 result.tar.gz
[2025-10-13 09:06:27] -rw-r--r--. 1 boincer umatlas      8704 Oct 13 09:06 runtime_log.err
[2025-10-13 09:06:27] -rw-------. 1 boincer umatlas       658 Oct 13 09:06 lvYKDmqLIS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmd2UMDmV64E8m.diag
[2025-10-13 09:06:27] -rw-r--r--. 1 boincer umatlas     21051 Oct 13 09:06 stderr.txt
[2025-10-13 09:06:27] HITS file was successfully produced:
[2025-10-13 09:06:27] -rw-------. 1 boincer umatlas 195719947 Oct 13 09:04 shared/HITS.pool.root.1
[2025-10-13 09:06:27]  *** Contents of shared directory: ***
[2025-10-13 09:06:27] total 413312
[2025-10-13 09:06:27] -rw-r--r--. 2 boincer umatlas 222598861 Oct 13 00:01 ATLAS.root_0
[2025-10-13 09:06:27] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:01 start_atlas.sh
[2025-10-13 09:06:27] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 00:01 input.tar.gz
[2025-10-13 09:06:27] -rw-------. 1 boincer umatlas 195719947 Oct 13 09:04 HITS.pool.root.1
[2025-10-13 09:06:27] -rw-------. 1 boincer umatlas   4311040 Oct 13 09:06 result.tar.gz
09:06:28 (1489111): run_atlas exited; CPU time 45155.378885
09:06:28 (1489111): called boinc_finish(0)

</stderr_txt>
]]>

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