Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:12:14 (2566603): wrapper (7.7.26015): starting
18:12:14 (2566603): wrapper: running run_atlas (--nthreads 6)
[2025-10-13 18:12:14] Arguments: --nthreads 6
[2025-10-13 18:12:14] Threads: 6
[2025-10-13 18:12:14] Checking for CVMFS
[2025-10-13 18:12:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 18:12:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 18:12:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 18:12:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 18:12:15] 2.11.5.0 3102357 5066 90608 151656 3 57 42888367 52428801 931 130560 0 11423011 99.997 180571 15 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.35.143:3126 1
[2025-10-13 18:12:15] CVMFS is ok
[2025-10-13 18:12:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 18:12:15] Checking for apptainer binary...
[2025-10-13 18:12:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 18:12:15] Running /usr/bin/apptainer --version
[2025-10-13 18:12:15] apptainer version 1.3.6-1.el9
[2025-10-13 18:12:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 18:12:15] testio002
[2025-10-13 18:12:15] apptainer works
[2025-10-13 18:12:15] Set ATHENA_PROC_NUMBER=6
[2025-10-13 18:12:15] Set ATHENA_CORE_NUMBER=6
[2025-10-13 18:12:15] Starting ATLAS job with PandaID=6840711690
[2025-10-13 18:12:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 19:16:49]  *** The last 200 lines of the pilot log: ***
[2025-10-13 19:16:49]  scope=mc23_13p6TeV
[2025-10-13 19:16:49]  status=None
[2025-10-13 19:16:49]  status_code=0
[2025-10-13 19:16:49]  storage_token=
[2025-10-13 19:16:49]  surl=/var/lib/boinc/slots/3/PanDA_Pilot-6840711690/log.46676269._087258.job.log.tgz.1
[2025-10-13 19:16:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7a/c7/log.46676269._087258.job.log.tgz.1
[2025-10-13 19:16:49]  workdir=None
[2025-10-13 19:16:49] ]
[2025-10-13 19:16:49] 2025-10-13 10:16:12,093 | INFO     | transferring file log.46676269._087258.job.log.tgz.1 from /var/lib/boinc/slots/3/PanDA_Pilot-6840711690/log.46676269._087258.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-13 19:16:49] 2025-10-13 10:16:12,093 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/3/PanDA_Pilot-6840711690/log.46676269._087258.job.log.tgz.1 /var/lib/boinc/slots/3/log.46676269._087258.job
[2025-10-13 19:16:49] 2025-10-13 10:16:12,098 | INFO     | adding to output.list: log.46676269._087258.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7a/c7/log.46676269._087258.job.log.tg
[2025-10-13 19:16:49] 2025-10-13 10:16:12,099 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 19:16:49] 2025-10-13 10:16:12,099 | INFO     | summary of transferred files:
[2025-10-13 19:16:49] 2025-10-13 10:16:12,099 | INFO     |  -- lfn=log.46676269._087258.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 19:16:49] 2025-10-13 10:16:12,099 | INFO     | stage-out finished correctly
[2025-10-13 19:16:49] 2025-10-13 10:16:12,433 | INFO     | time since job start (3827s) is within the limit (172800.0s)
[2025-10-13 19:16:49] 2025-10-13 10:16:13,494 | INFO     | PID=2570443 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 19:16:49] 2025-10-13 10:16:13,494 | INFO     | .. there are 2 such processes running
[2025-10-13 19:16:49] 2025-10-13 10:16:14,003 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 19:16:49] 2025-10-13 10:16:14,494 | INFO     | time since job start (3829s) is within the limit (172800.0s)
[2025-10-13 19:16:49] 2025-10-13 10:16:16,057 | INFO     | job 6840711690 has state=finished
[2025-10-13 19:16:49] 2025-10-13 10:16:16,057 | INFO     | preparing for final server update for job 6840711690 in state='finished'
[2025-10-13 19:16:49] 2025-10-13 10:16:16,057 | INFO     | this job has now completed (state=finished)
[2025-10-13 19:16:49] 2025-10-13 10:16:16,057 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 19:16:49] 2025-10-13 10:16:16,057 | INFO     | log transfer has been attempted: DONE
[2025-10-13 19:16:49] 2025-10-13 10:16:16,057 | INFO     | job 6840711690 has finished - writing final server update
[2025-10-13 19:16:49] 2025-10-13 10:16:16,057 | INFO     | total number of processed events: 400 (read)
[2025-10-13 19:16:49] 2025-10-13 10:16:16,058 | INFO     | executing command: lscpu
[2025-10-13 19:16:49] 2025-10-13 10:16:16,065 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 19:16:49] 2025-10-13 10:16:16,499 | INFO     | time since job start (3831s) is within the limit (172800.0s)
[2025-10-13 19:16:49] 2025-10-13 10:16:16,548 | WARNING  | process 2579466 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 19:16:49] 2025-10-13 10:16:16,548 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6840711690/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 19:16:49] 2025-10-13 10:16:16,586 | INFO     | number of running child processes to parent process 2579466: 1
[2025-10-13 19:16:49] 2025-10-13 10:16:16,586 | INFO     | maximum number of monitored processes: 6
[2025-10-13 19:16:49] 2025-10-13 10:16:17,365 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 19:16:49] 2025-10-13 10:16:17,366 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4250.442875
[2025-10-13 19:16:49] 2025-10-13 10:16:17,368 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6840711690/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 19:16:49] 2025-10-13 10:16:17,368 | INFO     | extracted standard info from prmon json
[2025-10-13 19:16:49] 2025-10-13 10:16:17,368 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 19:16:49] 2025-10-13 10:16:17,369 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 19:16:49] 2025-10-13 10:16:17,369 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 19:16:49] 2025-10-13 10:16:17,369 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 19:16:49] 2025-10-13 10:16:17,370 | INFO     | fitting pss+swap vs Time
[2025-10-13 19:16:49] 2025-10-13 10:16:17,370 | INFO     | sum of square deviations: 54438230.0
[2025-10-13 19:16:49] 2025-10-13 10:16:17,370 | INFO     | sum of deviations: -3023240367.5
[2025-10-13 19:16:49] 2025-10-13 10:16:17,370 | INFO     | mean x: 1760348744.5
[2025-10-13 19:16:49] 2025-10-13 10:16:17,370 | INFO     | mean y: 2582363.7678571427
[2025-10-13 19:16:49] 2025-10-13 10:16:17,370 | INFO     | -- intersect: 97763978817.14894
[2025-10-13 19:16:49] 2025-10-13 10:16:17,370 | INFO     | intersect: 97763978817.14894
[2025-10-13 19:16:49] 2025-10-13 10:16:17,370 | INFO     | chi2: 0.04915983338487778
[2025-10-13 19:16:49] 2025-10-13 10:16:17,370 | INFO     | -- intersect: 97763978817.14894
[2025-10-13 19:16:49] 2025-10-13 10:16:17,370 | INFO     | current memory leak: -55.54 B/s (using 56 data points, chi2=0.05)
[2025-10-13 19:16:49] 2025-10-13 10:16:17,370 | INFO     | could have reported an average CPU frequency of 4278 MHz (6 samples)
[2025-10-13 19:16:49] 2025-10-13 10:16:17,370 | INFO     | ..............................
[2025-10-13 19:16:49] 2025-10-13 10:16:17,370 | INFO     | . Timing measurements:
[2025-10-13 19:16:49] 2025-10-13 10:16:17,371 | INFO     | . get job = 0 s
[2025-10-13 19:16:49] 2025-10-13 10:16:17,371 | INFO     | . initial setup = 6 s
[2025-10-13 19:16:49] 2025-10-13 10:16:17,371 | INFO     | . payload setup = 2 s
[2025-10-13 19:16:49] 2025-10-13 10:16:17,371 | INFO     | . stage-in = 0 s
[2025-10-13 19:16:49] 2025-10-13 10:16:17,371 | INFO     | . payload execution = 3807 s
[2025-10-13 19:16:49] 2025-10-13 10:16:17,371 | INFO     | . stage-out = 0 s
[2025-10-13 19:16:49] 2025-10-13 10:16:17,371 | INFO     | . log creation = 0 s
[2025-10-13 19:16:49] 2025-10-13 10:16:17,371 | INFO     | ..............................
[2025-10-13 19:16:49] 2025-10-13 10:16:17,423 | INFO     | 
[2025-10-13 19:16:49] 2025-10-13 10:16:17,423 | INFO     | job summary report
[2025-10-13 19:16:49] 2025-10-13 10:16:17,423 | INFO     | --------------------------------------------------
[2025-10-13 19:16:49] 2025-10-13 10:16:17,423 | INFO     | PanDA job id: 6840711690
[2025-10-13 19:16:49] 2025-10-13 10:16:17,423 | INFO     | task id: 46676269
[2025-10-13 19:16:49] 2025-10-13 10:16:17,423 | INFO     | errors: (none)
[2025-10-13 19:16:49] 2025-10-13 10:16:17,423 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 19:16:49] 2025-10-13 10:16:17,423 | INFO     | pilot state: finished 
[2025-10-13 19:16:49] 2025-10-13 10:16:17,423 | INFO     | transexitcode: 0
[2025-10-13 19:16:49] 2025-10-13 10:16:17,423 | INFO     | exeerrorcode: 0
[2025-10-13 19:16:49] 2025-10-13 10:16:17,423 | INFO     | exeerrordiag: 
[2025-10-13 19:16:49] 2025-10-13 10:16:17,423 | INFO     | exitcode: 0
[2025-10-13 19:16:49] 2025-10-13 10:16:17,423 | INFO     | exitmsg: OK
[2025-10-13 19:16:49] 2025-10-13 10:16:17,423 | INFO     | cpuconsumptiontime: 20702 s
[2025-10-13 19:16:49] 2025-10-13 10:16:17,423 | INFO     | nevents: 400
[2025-10-13 19:16:49] 2025-10-13 10:16:17,423 | INFO     | neventsw: 0
[2025-10-13 19:16:49] 2025-10-13 10:16:17,423 | INFO     | pid: 2579466
[2025-10-13 19:16:49] 2025-10-13 10:16:17,423 | INFO     | pgrp: 2579466
[2025-10-13 19:16:49] 2025-10-13 10:16:17,423 | INFO     | corecount: 6
[2025-10-13 19:16:49] 2025-10-13 10:16:17,423 | INFO     | event service: False
[2025-10-13 19:16:49] 2025-10-13 10:16:17,423 | INFO     | sizes: {0: 2348804, 1: 2349066, 10: 2349094, 3813: 2374929, 3815: 2383927, 3817: 2383983, 3820: 2384305}
[2025-10-13 19:16:49] 2025-10-13 10:16:17,424 | INFO     | --------------------------------------------------
[2025-10-13 19:16:49] 2025-10-13 10:16:17,424 | INFO     | 
[2025-10-13 19:16:49] 2025-10-13 10:16:17,424 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-10-13 19:16:49] 2025-10-13 10:16:17,429 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 19:16:49] 2025-10-13 10:16:17,430 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 19:16:49] 2025-10-13 10:16:17,430 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 19:16:49] 2025-10-13 10:16:17,430 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 19:16:49] 2025-10-13 10:16:17,430 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 19:16:49] 2025-10-13 10:16:17,430 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 19:16:49] 2025-10-13 10:16:17,430 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 19:16:49] 2025-10-13 10:16:17,430 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 19:16:49] 2025-10-13 10:16:17,430 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 19:16:49] 2025-10-13 10:16:17,430 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 19:16:49] 2025-10-13 10:16:17,430 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 19:16:49] 2025-10-13 10:16:17,430 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 19:16:49] 2025-10-13 10:16:17,430 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 19:16:49] 2025-10-13 10:16:17,430 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 19:16:49] 2025-10-13 10:16:17,430 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 19:16:49] 2025-10-13 10:16:17,430 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 19:16:49] 2025-10-13 10:16:17,430 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 19:16:49] 2025-10-13 10:16:17,430 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 19:16:49] 2025-10-13 10:16:17,430 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 19:16:49] 2025-10-13 10:16:17,430 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 19:16:49] 2025-10-13 10:16:17,430 | INFO     | job 6840711690 has completed (purged errors)
[2025-10-13 19:16:49] 2025-10-13 10:16:17,430 | INFO     | overall cleanup function is called
[2025-10-13 19:16:49] 2025-10-13 10:16:18,435 | INFO     | --- collectZombieJob: --- 10, [2579466]
[2025-10-13 19:16:49] 2025-10-13 10:16:18,435 | INFO     | zombie collector waiting for pid 2579466
[2025-10-13 19:16:49] 2025-10-13 10:16:18,435 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 19:16:49] 2025-10-13 10:16:18,435 | INFO     | collected zombie processes
[2025-10-13 19:16:49] 2025-10-13 10:16:18,435 | INFO     | will attempt to kill all subprocesses of pid=2579466
[2025-10-13 19:16:49] 2025-10-13 10:16:18,467 | INFO     | process IDs to be killed: [2579466] (in reverse order)
[2025-10-13 19:16:49] 2025-10-13 10:16:18,480 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 19:16:49] 2025-10-13 10:16:18,480 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 19:16:49] 2025-10-13 10:16:18,482 | INFO     | did not find any defunct processes belonging to 2579466
[2025-10-13 19:16:49] 2025-10-13 10:16:18,483 | INFO     | did not find any defunct processes belonging to 2579466
[2025-10-13 19:16:49] 2025-10-13 10:16:18,483 | INFO     | ready for new job
[2025-10-13 19:16:49] 2025-10-13 10:16:18,483 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 19:16:49] 2025-10-13 10:16:18,484 | INFO     | ***************************************
[2025-10-13 19:16:49] 2025-10-13 10:16:18,484 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 19:16:49] 2025-10-13 10:16:18,484 | INFO     | ***************************************
[2025-10-13 19:16:49] 2025-10-13 10:16:18,484 | INFO     | 
[2025-10-13 19:16:49] 2025-10-13 10:16:18,485 | INFO     | architecture information:
[2025-10-13 19:16:49] 2025-10-13 10:16:18,485 | INFO     | executing command: cat /etc/os-release
[2025-10-13 19:16:49] 2025-10-13 10:16:18,490 | INFO     | cat /etc/os-release:
[2025-10-13 19:16:49] NAME="CentOS Linux"
[2025-10-13 19:16:49] VERSION="7 (Core)"
[2025-10-13 19:16:49] ID="centos"
[2025-10-13 19:16:49] ID_LIKE="rhel fedora"
[2025-10-13 19:16:49] VERSION_ID="7"
[2025-10-13 19:16:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 19:16:49] ANSI_COLOR="0;31"
[2025-10-13 19:16:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 19:16:49] HOME_URL="https://www.centos.org/"
[2025-10-13 19:16:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 19:16:49] 
[2025-10-13 19:16:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 19:16:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 19:16:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 19:16:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 19:16:49] 
[2025-10-13 19:16:49] 2025-10-13 10:16:18,490 | INFO     | ***************************************
[2025-10-13 19:16:49] 2025-10-13 10:16:18,993 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-10-13 19:16:49] 2025-10-13 10:16:18,998 | INFO     | sufficient remaining disk space (301007372288 B)
[2025-10-13 19:16:49] 2025-10-13 10:16:18,999 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 19:16:49] 2025-10-13 10:16:18,999 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 19:16:49] 2025-10-13 10:16:18,999 | INFO     | update_server=False
[2025-10-13 19:16:49] 2025-10-13 10:16:18,999 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 19:16:49] 2025-10-13 10:16:18,999 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 19:16:49] 2025-10-13 10:16:19,089 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 19:16:49] 2025-10-13 10:16:19,089 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 19:16:49] 2025-10-13 10:16:19,089 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 19:16:49] 2025-10-13 10:16:19,089 | INFO     | will abort loop
[2025-10-13 19:16:49] 2025-10-13 10:16:19,624 | INFO     | all payload control threads have been joined
[2025-10-13 19:16:49] 2025-10-13 10:16:19,940 | INFO     | all data control threads have been joined
[2025-10-13 19:16:49] 2025-10-13 10:16:19,974 | INFO     | all job control threads have been joined
[2025-10-13 19:16:49] 2025-10-13 10:16:20,004 | INFO     | [job] retrieve thread has finished
[2025-10-13 19:16:49] 2025-10-13 10:16:20,004 | INFO     | [job] queue monitor thread has finished
[2025-10-13 19:16:49] 2025-10-13 10:16:20,060 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 19:16:49] 2025-10-13 10:16:20,094 | INFO     | [job] job monitor thread has finished
[2025-10-13 19:16:49] 2025-10-13 10:16:20,136 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 19:16:49] 2025-10-13 10:16:20,626 | INFO     | [payload] control thread has finished
[2025-10-13 19:16:49] 2025-10-13 10:16:20,643 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 19:16:49] 2025-10-13 10:16:20,945 | INFO     | [data] control thread has finished
[2025-10-13 19:16:49] 2025-10-13 10:16:20,979 | INFO     | [job] control thread has finished
[2025-10-13 19:16:49] 2025-10-13 10:16:21,010 | INFO     | [job] validate thread has finished
[2025-10-13 19:16:49] 2025-10-13 10:16:21,115 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 19:16:49] 2025-10-13 10:16:21,189 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 19:16:49] 2025-10-13 10:16:21,220 | INFO     | [data] copytool_in thread has finished
[2025-10-13 19:16:49] 2025-10-13 10:16:21,270 | INFO     | [payload] validate_post thread has finished
[2025-10-13 19:16:49] 2025-10-13 10:16:21,277 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 19:16:49] 2025-10-13 10:16:21,472 | INFO     | [payload] failed_post thread has finished
[2025-10-13 19:16:49] 2025-10-13 10:16:22,141 | INFO     | [data] copytool_out thread has finished
[2025-10-13 19:16:49] 2025-10-13 10:16:24,066 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 19:16:49] 2025-10-13 10:16:30,821 | INFO     | [monitor] cgroup control has ended
[2025-10-13 19:16:49] 2025-10-13 10:16:32,219 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139635643262784)>', '<ExcThread(monitor, started 139635007149824)>']
[2025-10-13 19:16:49] 2025-10-13 10:16:37,244 | INFO     | all workflow threads have been joined
[2025-10-13 19:16:49] 2025-10-13 10:16:37,244 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 19:16:49] 2025-10-13 10:16:37,244 | INFO     | traces error code: 0
[2025-10-13 19:16:49] 2025-10-13 10:16:37,244 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 19:16:49] 2025-10-13 10:16:49,601 | INFO     | PID=2570443 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 19:16:49] 2025-10-13 10:16:49,605 | INFO     | .. there are 2 such processes running
[2025-10-13 19:16:49] 2025-10-13 10:16:49,605 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 19:16:49] 2025-10-13 10:16:49,605 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 19:16:49] 2025-10-13 10:16:49,605 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 19:16:49] 2025-10-13 10:16:49,605 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 19:16:49] 2025-10-13 10:16:49,605 | INFO     | [monitor] control thread has ended
[2025-10-13 19:16:49] 2025-10-13 10:16:49,645 [wrapper] ==== pilot stdout END ====
[2025-10-13 19:16:49] 2025-10-13 10:16:49,646 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 19:16:49] 2025-10-13 10:16:49,647 [wrapper] pilotpid: 2570443
[2025-10-13 19:16:49] 2025-10-13 10:16:49,648 [wrapper] Pilot exit status: 0
[2025-10-13 19:16:49] 2025-10-13 10:16:49,650 [wrapper] pandaids: 6840711690
[2025-10-13 19:16:49] 2025-10-13 10:16:49,661 [wrapper] cleanup supervisor_pilot 2608617 2570444
[2025-10-13 19:16:49] 2025-10-13 10:16:49,662 [wrapper] Test setup, not cleaning
[2025-10-13 19:16:49] 2025-10-13 10:16:49,663 [wrapper] apfmon messages muted
[2025-10-13 19:16:49] 2025-10-13 10:16:49,664 [wrapper] ==== wrapper stdout END ====
[2025-10-13 19:16:49] 2025-10-13 10:16:49,664 [wrapper] ==== wrapper stderr END ====
[2025-10-13 19:16:49]  *** Error codes and diagnostics ***
[2025-10-13 19:16:49]     "exeErrorCode": 0,
[2025-10-13 19:16:49]     "exeErrorDiag": "",
[2025-10-13 19:16:49]     "pilotErrorCode": 0,
[2025-10-13 19:16:49]     "pilotErrorDiag": "",
[2025-10-13 19:16:49]  *** Listing of results directory ***
[2025-10-13 19:16:49] total 409560
[2025-10-13 19:16:49] -rw-r--r--. 1 boinc boinc    557409 Oct 13 03:53 pilot3.tar.gz
[2025-10-13 19:16:49] -rw-r--r--. 1 boinc boinc      5112 Oct 13 04:15 queuedata.json
[2025-10-13 19:16:49] -rwx------. 1 boinc boinc     36292 Oct 13 04:16 runpilot2-wrapper.sh
[2025-10-13 19:16:49] -rw-r--r--. 1 boinc boinc       100 Oct 13 18:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 19:16:49] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 18:12 run_atlas
[2025-10-13 19:16:49] -rw-r--r--. 1 boinc boinc       105 Oct 13 18:12 job.xml
[2025-10-13 19:16:49] -rw-r--r--. 2 boinc boinc 222382289 Oct 13 18:12 EVNT.46676267._004445.pool.root.1
[2025-10-13 19:16:49] -rw-r--r--. 2 boinc boinc     15120 Oct 13 18:12 start_atlas.sh
[2025-10-13 19:16:49] drwxrwx--x. 2 boinc boinc        68 Oct 13 18:12 shared
[2025-10-13 19:16:49] -rw-r--r--. 2 boinc boinc    569681 Oct 13 18:12 input.tar.gz
[2025-10-13 19:16:49] -rw-r--r--. 1 boinc boinc         0 Oct 13 18:12 boinc_lockfile
[2025-10-13 19:16:49] -rw-r--r--. 1 boinc boinc      2548 Oct 13 18:12 pandaJob.out
[2025-10-13 19:16:49] -rw-------. 1 boinc boinc    972849 Oct 13 18:12 agis_schedconf.cvmfs.json
[2025-10-13 19:16:49] -rw-------. 1 boinc boinc   1560580 Oct 13 18:12 agis_ddmendpoints.agis.ALL.json
[2025-10-13 19:16:49] drwx------. 5 boinc boinc      4096 Oct 13 18:12 pilot3
[2025-10-13 19:16:49] -rw-r--r--. 1 boinc boinc      9635 Oct 13 19:01 init_data.xml
[2025-10-13 19:16:49] -rw-------. 1 boinc boinc 191435366 Oct 13 19:15 HITS.46676269._087258.pool.root.1
[2025-10-13 19:16:49] -rw-r--r--. 1 boinc boinc       529 Oct 13 19:16 boinc_task_state.xml
[2025-10-13 19:16:49] -rw-------. 1 boinc boinc      1026 Oct 13 19:16 memory_monitor_summary.json
[2025-10-13 19:16:49] -rw-------. 1 boinc boinc    269351 Oct 13 19:16 log.46676269._087258.job.log.tgz.1
[2025-10-13 19:16:49] -rw-------. 1 boinc boinc      7793 Oct 13 19:16 heartbeat.json
[2025-10-13 19:16:49] -rw-r--r--. 1 boinc boinc      8192 Oct 13 19:16 boinc_mmap_file
[2025-10-13 19:16:49] -rw-r--r--. 1 boinc boinc        27 Oct 13 19:16 wrapper_checkpoint.txt
[2025-10-13 19:16:49] -rw-------. 1 boinc boinc       822 Oct 13 19:16 pilotlog.txt
[2025-10-13 19:16:49] -rw-------. 1 boinc boinc        95 Oct 13 19:16 pilot_heartbeat.json
[2025-10-13 19:16:49] -rw-------. 1 boinc boinc    574156 Oct 13 19:16 log.46676269._087258.job.log.1
[2025-10-13 19:16:49] -rw-------. 1 boinc boinc       357 Oct 13 19:16 output.list
[2025-10-13 19:16:49] -rw-r--r--. 1 boinc boinc       620 Oct 13 19:16 runtime_log
[2025-10-13 19:16:49] -rw-------. 1 boinc boinc    860160 Oct 13 19:16 result.tar.gz
[2025-10-13 19:16:49] -rw-------. 1 boinc boinc       641 Oct 13 19:16 u5IMDmEjGS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmXFlNDmm4MOFm.diag
[2025-10-13 19:16:49] -rw-r--r--. 1 boinc boinc      8661 Oct 13 19:16 runtime_log.err
[2025-10-13 19:16:49] -rw-r--r--. 1 boinc boinc     21659 Oct 13 19:16 stderr.txt
[2025-10-13 19:16:49] HITS file was successfully produced:
[2025-10-13 19:16:49] -rw-------. 1 boinc boinc 191435366 Oct 13 19:15 shared/HITS.pool.root.1
[2025-10-13 19:16:49]  *** Contents of shared directory: ***
[2025-10-13 19:16:49] total 405540
[2025-10-13 19:16:49] -rw-r--r--. 2 boinc boinc 222382289 Oct 13 18:12 ATLAS.root_0
[2025-10-13 19:16:49] -rw-r--r--. 2 boinc boinc     15120 Oct 13 18:12 start_atlas.sh
[2025-10-13 19:16:49] -rw-r--r--. 2 boinc boinc    569681 Oct 13 18:12 input.tar.gz
[2025-10-13 19:16:49] -rw-------. 1 boinc boinc 191435366 Oct 13 19:15 HITS.pool.root.1
[2025-10-13 19:16:49] -rw-------. 1 boinc boinc    860160 Oct 13 19:16 result.tar.gz
19:16:51 (2566603): run_atlas exited; CPU time 20721.641684
19:16:51 (2566603): called boinc_finish(0)

</stderr_txt>
]]>

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