Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-13 09:52:33 (8284): vboxwrapper version 26210
2025-10-13 09:52:33 (8284): BOINC client version: 8.0.2
2025-10-13 09:52:34 (8284): Detected: VirtualBox VboxManage Interface (Version: 7.0.12)
2025-10-13 09:52:34 (8284): Successfully copied 'init_data.xml' to the shared directory.
2025-10-13 09:52:34 (8284): Create VM. (boinc_5bc3ce64896a11be, slot#0)
2025-10-13 09:52:35 (8284): Setting Memory Size for VM. (5900MB)
2025-10-13 09:52:35 (8284): Setting CPU Count for VM. (4)
2025-10-13 09:52:35 (8284): Setting Chipset Options for VM.
2025-10-13 09:52:35 (8284): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-13 09:52:36 (8284): Setting Boot Options for VM.
2025-10-13 09:52:36 (8284): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-13 09:52:36 (8284): Enabling VM Network Access.
2025-10-13 09:52:37 (8284): Disabling USB Support for VM.
2025-10-13 09:52:37 (8284): Disabling COM Port Support for VM.
2025-10-13 09:52:37 (8284): Disabling LPT Port Support for VM.
2025-10-13 09:52:37 (8284): Disabling Audio Support for VM.
2025-10-13 09:52:38 (8284): Disabling Clipboard Support for VM.
2025-10-13 09:52:38 (8284): Disabling Drag and Drop Support for VM.
2025-10-13 09:52:38 (8284): Adding storage controller(s) to VM.
2025-10-13 09:52:38 (8284): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-13 09:52:39 (8284): Adding VirtualBox Guest Additions to VM.
2025-10-13 09:52:39 (8284): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-13 09:52:39 (8284): forwarding host port 60396 to guest port 80
2025-10-13 09:52:40 (8284): Enabling remote desktop for VM.
2025-10-13 09:52:40 (8284): Enabling shared directory for VM.
2025-10-13 09:52:41 (8284): Starting VM using VBoxManage interface. (boinc_5bc3ce64896a11be, slot#0)
2025-10-13 09:52:49 (8284): Successfully started VM. (PID = '3812')
2025-10-13 09:52:49 (8284): Reporting VM Process ID to BOINC.
2025-10-13 09:52:49 (8284): Guest Log: BIOS: VirtualBox 7.0.12
2025-10-13 09:52:49 (8284): Guest Log: CPUID EDX: 0x178bfbff
2025-10-13 09:52:49 (8284): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-13 09:52:49 (8284): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-13 09:52:49 (8284): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-13 09:52:49 (8284): Detected: Web Application Enabled (http://localhost:60396)
2025-10-13 09:52:49 (8284): Detected: Remote Desktop Enabled (localhost:60397)
2025-10-13 09:52:49 (8284): Preference change detected
2025-10-13 09:52:49 (8284): Setting CPU throttle for VM. (100%)
2025-10-13 09:52:49 (8284): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-13 09:52:51 (8284): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-13 09:52:51 (8284): Guest Log: BIOS: Booting from Hard Disk...
2025-10-13 09:52:54 (8284): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-13 09:52:54 (8284): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-13 09:52:54 (8284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-13 09:52:54 (8284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-13 09:52:54 (8284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-13 09:52:54 (8284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-13 09:52:54 (8284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-13 09:52:54 (8284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-13 09:52:54 (8284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-13 09:52:54 (8284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-13 09:52:54 (8284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-13 09:52:54 (8284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-13 09:52:54 (8284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-13 09:52:54 (8284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-13 09:52:54 (8284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-13 09:52:54 (8284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-13 09:52:54 (8284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-13 09:52:54 (8284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-13 09:52:54 (8284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-13 09:52:54 (8284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-13 09:52:54 (8284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-13 09:52:54 (8284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-13 09:52:54 (8284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-13 09:52:54 (8284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-13 09:52:54 (8284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-13 09:52:54 (8284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-13 09:52:54 (8284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-13 09:52:54 (8284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-13 09:52:54 (8284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-13 09:52:54 (8284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-13 09:52:54 (8284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-13 09:52:54 (8284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-13 09:53:03 (8284): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-13 09:53:03 (8284): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-13 09:53:15 (8284): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-13 09:53:15 (8284): Guest Log: 00:00:00.000151 main     Log opened 2025-10-13T09:53:12.895554000Z
2025-10-13 09:53:15 (8284): Guest Log: 00:00:00.000303 main     OS Product: Linux
2025-10-13 09:53:15 (8284): Guest Log: 00:00:00.000373 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-13 09:53:15 (8284): Guest Log: 00:00:00.000420 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-13 09:53:15 (8284): Guest Log: 00:00:00.000467 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-13 09:53:15 (8284): Guest Log: 00:00:00.000468 main     Process ID: 1358
2025-10-13 09:53:15 (8284): Guest Log: 00:00:00.000470 main     Package type: LINUX_64BITS_GENERIC
2025-10-13 09:53:15 (8284): Guest Log: 00:00:00.002768 main     5.2.32 r132073 started. Verbose level = 0
2025-10-13 09:53:15 (8284): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-13 09:53:15 (8284): Guest Log: [INFO] Mounting shared directory
2025-10-13 09:53:15 (8284): Guest Log: [INFO] Checking for init_data.xml
2025-10-13 09:53:25 (8284): Guest Log: 00:00:10.008838 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 472 527 000ns (GuestNow=1 760 342 004 429 846 000 ns GuestLast=1 760 349 192 902 373 000 ns fSetTimeLastLoop=true )
2025-10-13 09:53:39 (8284): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-13 09:53:39 (8284): Guest Log: [INFO] Detected branch: prod
2025-10-13 09:53:39 (8284): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-13 09:53:39 (8284): Guest Log: Copying input files
2025-10-13 09:53:42 (8284): Guest Log: Copied input files into RunAtlas.
2025-10-13 09:53:42 (8284): Guest Log: Detected user-configured HTTP proxy at http://192.168.0.39:3128 - will set in /etc/cvmfs/default.local
2025-10-13 09:53:52 (8284): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-13 09:53:52 (8284): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-13 09:53:52 (8284): Guest Log: 2.6.3.0 1638 0 29624 151653 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.39:3128 1
2025-10-13 09:53:53 (8284): Guest Log: copied the webapp to /var/www
2025-10-13 09:53:53 (8284): Guest Log: ATHENA_PROC_NUMBER=4
2025-10-13 09:53:53 (8284): Guest Log: ATHENA_CORE_NUMBER=4
2025-10-13 09:53:53 (8284): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-13 09:53:53 (8284): Guest Log:  *** Starting ATLAS job. (PandaID=6840750051 taskID=46676269) ***
2025-10-13 11:32:54 (8284): Status Report: Elapsed Time: '6000.000000'
2025-10-13 11:32:54 (8284): Status Report: CPU Time: '21281.234375'
2025-10-13 13:12:59 (8284): Status Report: Elapsed Time: '12000.000000'
2025-10-13 13:12:59 (8284): Status Report: CPU Time: '44733.484375'
2025-10-13 14:53:04 (8284): Status Report: Elapsed Time: '18000.000000'
2025-10-13 14:53:04 (8284): Status Report: CPU Time: '68201.906250'
2025-10-13 16:33:09 (8284): Status Report: Elapsed Time: '24000.000000'
2025-10-13 16:33:09 (8284): Status Report: CPU Time: '91752.609375'
2025-10-13 17:23:32 (8284): Guest Log:  *** Job finished ***
2025-10-13 17:23:32 (8284): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-13 17:23:32 (8284): Guest Log: 2025-10-13 15:23:11,130 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-13 17:23:32 (8284): Guest Log: 2025-10-13 15:23:11,130 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-13 17:23:32 (8284): Guest Log: 2025-10-13 15:23:21,479 | INFO     | [monitor] cgroup control has ended
2025-10-13 17:23:32 (8284): Guest Log: 2025-10-13 15:23:22,867 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140619823302464)>', '<ExcThread(monitor, started 140619527722752)>']
2025-10-13 17:23:32 (8284): Guest Log: 2025-10-13 15:23:23,178 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-13 17:23:32 (8284): Guest Log: 2025-10-13 15:23:23,178 | INFO     | [monitor] control thread has ended
2025-10-13 17:23:32 (8284): Guest Log: 2025-10-13 15:23:27,915 | INFO     | all workflow threads have been joined
2025-10-13 17:23:32 (8284): Guest Log: 2025-10-13 15:23:27,915 | INFO     | end of generic workflow (traces error code: 0)
2025-10-13 17:23:32 (8284): Guest Log: 2025-10-13 15:23:27,916 | INFO     | traces error code: 0
2025-10-13 17:23:32 (8284): Guest Log: 2025-10-13 15:23:27,916 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-13 17:23:32 (8284): Guest Log: 2025-10-13 15:23:28,055 [wrapper] ==== pilot stdout END ====
2025-10-13 17:23:32 (8284): Guest Log: 2025-10-13 15:23:28,063 [wrapper] ==== wrapper stdout RESUME ====
2025-10-13 17:23:32 (8284): Guest Log: 2025-10-13 15:23:28,071 [wrapper] pilotpid: 6028
2025-10-13 17:23:32 (8284): Guest Log: 2025-10-13 15:23:28,078 [wrapper] Pilot exit status: 0
2025-10-13 17:23:32 (8284): Guest Log: 2025-10-13 15:23:28,116 [wrapper] pandaids: 6840750051
2025-10-13 17:23:32 (8284): Guest Log: 2025-10-13 15:23:28,167 [wrapper] cleanup supervisor_pilot 30854 6029
2025-10-13 17:23:32 (8284): Guest Log: 2025-10-13 15:23:28,175 [wrapper] Test setup, not cleaning
2025-10-13 17:23:32 (8284): Guest Log: 2025-10-13 15:23:28,184 [wrapper] apfmon messages muted
2025-10-13 17:23:32 (8284): Guest Log: 2025-10-13 15:23:28,193 [wrapper] ==== wrapper stdout END ====
2025-10-13 17:23:32 (8284): Guest Log: 2025-10-13 15:23:28,200 [wrapper] ==== wrapper stderr END ====
2025-10-13 17:23:32 (8284): Guest Log:  *** Error codes and diagnostics ***
2025-10-13 17:23:32 (8284): Guest Log:     "exeErrorCode": 0,
2025-10-13 17:23:32 (8284): Guest Log:     "exeErrorDiag": "",
2025-10-13 17:23:32 (8284): Guest Log:     "pilotErrorCode": 0,
2025-10-13 17:23:32 (8284): Guest Log:     "pilotErrorDiag": "",
2025-10-13 17:23:32 (8284): Guest Log:  *** Listing of results directory ***
2025-10-13 17:23:32 (8284): Guest Log: total 192256
2025-10-13 17:23:32 (8284): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 12 20:55 pilot3.tar.gz
2025-10-13 17:23:32 (8284): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 12 21:03 runpilot2-wrapper.sh
2025-10-13 17:23:32 (8284): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 12 21:03 queuedata.json
2025-10-13 17:23:32 (8284): Guest Log: -rwxr-xr-x. 1 atlas atlas      9236 Oct 13 07:53 init_data.xml
2025-10-13 17:23:32 (8284): Guest Log: -rwxr-xr-x. 1 atlas atlas    569676 Oct 13 07:53 input.tar.gz
2025-10-13 17:23:32 (8284): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 13 07:53 start_atlas.sh
2025-10-13 17:23:32 (8284): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 13 07:53 EVNT.46676267._004767.pool.root.1 -> /data/./ATLAS.root_0
2025-10-13 17:23:32 (8284): Guest Log: -rw-r--r--. 1 atlas atlas      2549 Oct 13 07:53 pandaJob.out
2025-10-13 17:23:32 (8284): Guest Log: -rw-------. 1 atlas atlas    972849 Oct 13 07:54 agis_schedconf.cvmfs.json
2025-10-13 17:23:32 (8284): Guest Log: drwx------. 5 atlas atlas      4096 Oct 13 07:54 pilot3
2025-10-13 17:23:32 (8284): Guest Log: -rw-------. 1 atlas atlas 184887177 Oct 13 15:21 HITS.46676269._089430.pool.root.1
2025-10-13 17:23:32 (8284): Guest Log: -rw-------. 1 atlas atlas      1033 Oct 13 15:22 memory_monitor_summary.json
2025-10-13 17:23:32 (8284): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 13 15:22 agis_ddmendpoints.agis.ALL.json
2025-10-13 17:23:32 (8284): Guest Log: -rw-------. 1 atlas atlas    561845 Oct 13 15:22 log.46676269._089430.job.log.tgz.1
2025-10-13 17:23:32 (8284): Guest Log: -rw-------. 1 atlas atlas      7832 Oct 13 15:22 heartbeat.json
2025-10-13 17:23:32 (8284): Guest Log: -rw-------. 1 atlas atlas        95 Oct 13 15:23 pilot_heartbeat.json
2025-10-13 17:23:32 (8284): Guest Log: -rw-------. 1 atlas atlas      5063 Oct 13 15:23 pilotlog.txt
2025-10-13 17:23:32 (8284): Guest Log: -rw-------. 1 atlas atlas   3509880 Oct 13 15:23 log.46676269._089430.job.log.1
2025-10-13 17:23:32 (8284): Guest Log: -rw-------. 1 atlas atlas       357 Oct 13 15:23 output.list
2025-10-13 17:23:32 (8284): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 13 15:23 runtime_log
2025-10-13 17:23:32 (8284): Guest Log: -rw-------. 1 atlas atlas   4096000 Oct 13 15:23 result.tar.gz
2025-10-13 17:23:32 (8284): Guest Log: -rw-r--r--. 1 atlas atlas      8652 Oct 13 15:23 runtime_log.err
2025-10-13 17:23:32 (8284): Guest Log: -rw-------. 1 atlas atlas       663 Oct 13 15:23 GIvMDmwOIS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWYlNDm2IcYXn.diag
2025-10-13 17:23:32 (8284): Guest Log: Looking for outputfile HITS.46676269._089430.pool.root.1
2025-10-13 17:23:32 (8284): Guest Log: HITS file was successfully produced
2025-10-13 17:23:32 (8284): Guest Log: -rw-------. 1 atlas atlas 184887177 Oct 13 15:21 /home/atlas/RunAtlas/HITS.46676269._089430.pool.root.1
2025-10-13 17:23:34 (8284): Guest Log: Successfully finished the ATLAS job!
2025-10-13 17:23:34 (8284): Guest Log: Copying the results back to the shared directory!
2025-10-13 17:23:34 (8284): Guest Log:  *** Contents of shared directory: ***
2025-10-13 17:23:34 (8284): Guest Log: total 399359
2025-10-13 17:23:34 (8284): Guest Log: -rwxrwxrwx. 1 root root 219364093 Oct 13 07:52 ATLAS.root_0
2025-10-13 17:23:34 (8284): Guest Log: -rwxrwxrwx. 1 root root 184887177 Oct 13 15:23 HITS.pool.root.1
2025-10-13 17:23:34 (8284): Guest Log: -rwxrwxrwx. 1 root root      9236 Oct 13 07:52 init_data.xml
2025-10-13 17:23:34 (8284): Guest Log: -rwxrwxrwx. 1 root root    569676 Oct 13 01:14 input.tar.gz
2025-10-13 17:23:34 (8284): Guest Log: -rwxrwxrwx. 1 root root   4096000 Oct 13 15:23 result.tar.gz
2025-10-13 17:23:34 (8284): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 13 01:14 start_atlas.sh
2025-10-13 17:23:34 (8284): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-13 17:23:34 (8284): VM Completion File Detected.
2025-10-13 17:23:34 (8284): Powering off VM.
2025-10-13 17:23:34 (8284): Successfully stopped VM.
2025-10-13 17:23:34 (8284): Deregistering VM. (boinc_5bc3ce64896a11be, slot#0)
2025-10-13 17:23:34 (8284): Removing network bandwidth throttle group from VM.
2025-10-13 17:23:34 (8284): Removing VM from VirtualBox.
2025-10-13 17:23:40 (8284): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN