Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:48:08 (522209): wrapper (7.7.26015): starting
13:48:08 (522209): wrapper: running run_atlas (--nthreads 6)
[2025-10-13 13:48:08] Arguments: --nthreads 6
[2025-10-13 13:48:08] Threads: 6
[2025-10-13 13:48:08] Checking for CVMFS
[2025-10-13 13:48:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 13:48:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 13:48:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 13:48:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 13:48:08] 2.11.5.0 3651556 5279 73512 151649 0 60 38831941 52428800 1016 130560 0 16604198 99.998 180616 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-13 13:48:08] CVMFS is ok
[2025-10-13 13:48:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 13:48:08] Checking for apptainer binary...
[2025-10-13 13:48:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 13:48:08] Running /usr/bin/apptainer --version
[2025-10-13 13:48:08] apptainer version 1.3.5-1.el9
[2025-10-13 13:48:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 13:48:09] testio008
[2025-10-13 13:48:09] apptainer works
[2025-10-13 13:48:09] Set ATHENA_PROC_NUMBER=6
[2025-10-13 13:48:09] Set ATHENA_CORE_NUMBER=6
[2025-10-13 13:48:09] Starting ATLAS job with PandaID=6835984647
[2025-10-13 13:48:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 14:58:28]  *** The last 200 lines of the pilot log: ***
[2025-10-13 14:58:28] 2025-10-13 05:57:47,725 | INFO     | preparing for final server update for job 6835984647 in state='finished'
[2025-10-13 14:58:28] 2025-10-13 05:57:47,725 | INFO     | this job has now completed (state=finished)
[2025-10-13 14:58:28] 2025-10-13 05:57:47,726 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 14:58:28] 2025-10-13 05:57:47,726 | INFO     | log transfer has been attempted: DONE
[2025-10-13 14:58:28] 2025-10-13 05:57:47,726 | INFO     | job 6835984647 has finished - writing final server update
[2025-10-13 14:58:28] 2025-10-13 05:57:47,726 | INFO     | total number of processed events: 400 (read)
[2025-10-13 14:58:28] 2025-10-13 05:57:47,727 | INFO     | executing command: lscpu
[2025-10-13 14:58:28] 2025-10-13 05:57:47,751 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 14:58:28] 2025-10-13 05:57:48,896 | INFO     | monitor loop #319: job 0:6835984647 is in state 'finished'
[2025-10-13 14:58:28] 2025-10-13 05:57:48,897 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 14:58:28] 2025-10-13 05:57:49,471 | INFO     | time since job start (4174s) is within the limit (172800.0s)
[2025-10-13 14:58:28] 2025-10-13 05:57:51,400 | INFO     | monitor loop #320: job 0:6835984647 is in state 'finished'
[2025-10-13 14:58:28] 2025-10-13 05:57:51,400 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 14:58:28] 2025-10-13 05:57:51,476 | INFO     | time since job start (4176s) is within the limit (172800.0s)
[2025-10-13 14:58:28] 2025-10-13 05:57:53,482 | INFO     | time since job start (4178s) is within the limit (172800.0s)
[2025-10-13 14:58:28] 2025-10-13 05:57:53,903 | INFO     | monitor loop #321: job 0:6835984647 is in state 'finished'
[2025-10-13 14:58:28] 2025-10-13 05:57:53,903 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 14:58:28] 2025-10-13 05:57:55,488 | INFO     | time since job start (4180s) is within the limit (172800.0s)
[2025-10-13 14:58:28] 2025-10-13 05:57:56,405 | INFO     | monitor loop #322: job 0:6835984647 is in state 'finished'
[2025-10-13 14:58:28] 2025-10-13 05:57:56,406 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 14:58:28] 2025-10-13 05:57:57,493 | INFO     | time since job start (4182s) is within the limit (172800.0s)
[2025-10-13 14:58:28] 2025-10-13 05:57:58,908 | INFO     | monitor loop #323: job 0:6835984647 is in state 'finished'
[2025-10-13 14:58:28] 2025-10-13 05:57:58,909 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 14:58:28] 2025-10-13 05:57:59,494 | INFO     | time since job start (4184s) is within the limit (172800.0s)
[2025-10-13 14:58:28] 2025-10-13 05:58:01,412 | INFO     | monitor loop #324: job 0:6835984647 is in state 'finished'
[2025-10-13 14:58:28] 2025-10-13 05:58:01,412 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 14:58:28] 2025-10-13 05:58:01,499 | INFO     | time since job start (4186s) is within the limit (172800.0s)
[2025-10-13 14:58:28] 2025-10-13 05:58:03,504 | INFO     | time since job start (4188s) is within the limit (172800.0s)
[2025-10-13 14:58:28] 2025-10-13 05:58:03,915 | INFO     | monitor loop #325: job 0:6835984647 is in state 'finished'
[2025-10-13 14:58:28] 2025-10-13 05:58:03,915 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 14:58:28] 2025-10-13 05:58:05,510 | INFO     | time since job start (4190s) is within the limit (172800.0s)
[2025-10-13 14:58:28] 2025-10-13 05:58:06,416 | INFO     | monitor loop #326: job 0:6835984647 is in state 'finished'
[2025-10-13 14:58:28] 2025-10-13 05:58:06,416 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 14:58:28] 2025-10-13 05:58:07,264 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 14:58:28] 2025-10-13 05:58:07,268 | INFO     | found 12 cores (12 cores per socket, 1 socket) , CPU MHz: 1931.13585
[2025-10-13 14:58:28] 2025-10-13 05:58:07,272 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6835984647/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 14:58:28] 2025-10-13 05:58:07,273 | INFO     | extracted standard info from prmon json
[2025-10-13 14:58:28] 2025-10-13 05:58:07,273 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 14:58:28] 2025-10-13 05:58:07,273 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 14:58:28] 2025-10-13 05:58:07,274 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 14:58:28] 2025-10-13 05:58:07,274 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 14:58:28] 2025-10-13 05:58:07,276 | INFO     | fitting pss+swap vs Time
[2025-10-13 14:58:28] 2025-10-13 05:58:07,276 | INFO     | sum of square deviations: 70364110.0
[2025-10-13 14:58:28] 2025-10-13 05:58:07,276 | INFO     | sum of deviations: -3929513555.000001
[2025-10-13 14:58:28] 2025-10-13 05:58:07,276 | INFO     | mean x: 1760333048.0
[2025-10-13 14:58:28] 2025-10-13 05:58:07,276 | INFO     | mean y: 2490830.4426229508
[2025-10-13 14:58:28] 2025-10-13 05:58:07,277 | INFO     | -- intersect: 98309036218.85822
[2025-10-13 14:58:28] 2025-10-13 05:58:07,277 | INFO     | intersect: 98309036218.85822
[2025-10-13 14:58:28] 2025-10-13 05:58:07,277 | INFO     | chi2: 0.04007757924996451
[2025-10-13 14:58:28] 2025-10-13 05:58:07,277 | INFO     | -- intersect: 98309036218.85822
[2025-10-13 14:58:28] 2025-10-13 05:58:07,277 | INFO     | current memory leak: -55.85 B/s (using 61 data points, chi2=0.04)
[2025-10-13 14:58:28] 2025-10-13 05:58:07,278 | INFO     | could have reported an average CPU frequency of 3433 MHz (6 samples)
[2025-10-13 14:58:28] 2025-10-13 05:58:07,278 | INFO     | ..............................
[2025-10-13 14:58:28] 2025-10-13 05:58:07,278 | INFO     | . Timing measurements:
[2025-10-13 14:58:28] 2025-10-13 05:58:07,278 | INFO     | . get job = 0 s
[2025-10-13 14:58:28] 2025-10-13 05:58:07,278 | INFO     | . initial setup = 3 s
[2025-10-13 14:58:28] 2025-10-13 05:58:07,278 | INFO     | . payload setup = 2 s
[2025-10-13 14:58:28] 2025-10-13 05:58:07,278 | INFO     | . stage-in = 0 s
[2025-10-13 14:58:28] 2025-10-13 05:58:07,278 | INFO     | . payload execution = 4150 s
[2025-10-13 14:58:28] 2025-10-13 05:58:07,278 | INFO     | . stage-out = 0 s
[2025-10-13 14:58:28] 2025-10-13 05:58:07,278 | INFO     | . log creation = 0 s
[2025-10-13 14:58:28] 2025-10-13 05:58:07,279 | INFO     | ..............................
[2025-10-13 14:58:28] 2025-10-13 05:58:07,515 | INFO     | time since job start (4192s) is within the limit (172800.0s)
[2025-10-13 14:58:28] 2025-10-13 05:58:07,575 | INFO     | 
[2025-10-13 14:58:28] 2025-10-13 05:58:07,575 | INFO     | job summary report
[2025-10-13 14:58:28] 2025-10-13 05:58:07,576 | INFO     | --------------------------------------------------
[2025-10-13 14:58:28] 2025-10-13 05:58:07,576 | INFO     | PanDA job id: 6835984647
[2025-10-13 14:58:28] 2025-10-13 05:58:07,576 | INFO     | task id: 46676269
[2025-10-13 14:58:28] 2025-10-13 05:58:07,576 | INFO     | errors: (none)
[2025-10-13 14:58:28] 2025-10-13 05:58:07,576 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 14:58:28] 2025-10-13 05:58:07,576 | INFO     | pilot state: finished 
[2025-10-13 14:58:28] 2025-10-13 05:58:07,576 | INFO     | transexitcode: 0
[2025-10-13 14:58:28] 2025-10-13 05:58:07,576 | INFO     | exeerrorcode: 0
[2025-10-13 14:58:28] 2025-10-13 05:58:07,576 | INFO     | exeerrordiag: 
[2025-10-13 14:58:28] 2025-10-13 05:58:07,576 | INFO     | exitcode: 0
[2025-10-13 14:58:28] 2025-10-13 05:58:07,576 | INFO     | exitmsg: OK
[2025-10-13 14:58:28] 2025-10-13 05:58:07,577 | INFO     | cpuconsumptiontime: 22548 s
[2025-10-13 14:58:28] 2025-10-13 05:58:07,577 | INFO     | nevents: 400
[2025-10-13 14:58:28] 2025-10-13 05:58:07,577 | INFO     | neventsw: 0
[2025-10-13 14:58:28] 2025-10-13 05:58:07,577 | INFO     | pid: 546263
[2025-10-13 14:58:28] 2025-10-13 05:58:07,577 | INFO     | pgrp: 546263
[2025-10-13 14:58:28] 2025-10-13 05:58:07,577 | INFO     | corecount: 6
[2025-10-13 14:58:28] 2025-10-13 05:58:07,577 | INFO     | event service: False
[2025-10-13 14:58:28] 2025-10-13 05:58:07,577 | INFO     | sizes: {0: 2348024, 1: 2348880, 2: 2349142, 11: 2349170, 4156: 2384148, 4159: 2384148, 4179: 2384470}
[2025-10-13 14:58:28] 2025-10-13 05:58:07,577 | INFO     | --------------------------------------------------
[2025-10-13 14:58:28] 2025-10-13 05:58:07,577 | INFO     | 
[2025-10-13 14:58:28] 2025-10-13 05:58:07,577 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-10-13 14:58:28] 2025-10-13 05:58:07,592 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 14:58:28] 2025-10-13 05:58:07,592 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 14:58:28] 2025-10-13 05:58:07,592 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 14:58:28] 2025-10-13 05:58:07,592 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 14:58:28] 2025-10-13 05:58:07,592 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 14:58:28] 2025-10-13 05:58:07,592 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 14:58:28] 2025-10-13 05:58:07,592 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 14:58:28] 2025-10-13 05:58:07,592 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 14:58:28] 2025-10-13 05:58:07,592 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 14:58:28] 2025-10-13 05:58:07,592 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 14:58:28] 2025-10-13 05:58:07,592 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 14:58:28] 2025-10-13 05:58:07,592 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 14:58:28] 2025-10-13 05:58:07,593 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 14:58:28] 2025-10-13 05:58:07,593 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 14:58:28] 2025-10-13 05:58:07,593 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 14:58:28] 2025-10-13 05:58:07,593 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 14:58:28] 2025-10-13 05:58:07,593 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 14:58:28] 2025-10-13 05:58:07,593 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 14:58:28] 2025-10-13 05:58:07,593 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 14:58:28] 2025-10-13 05:58:07,593 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 14:58:28] 2025-10-13 05:58:07,593 | INFO     | job 6835984647 has completed (purged errors)
[2025-10-13 14:58:28] 2025-10-13 05:58:07,593 | INFO     | overall cleanup function is called
[2025-10-13 14:58:28] 2025-10-13 05:58:08,585 | INFO     | PID=526026 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 14:58:28] 2025-10-13 05:58:08,585 | INFO     | .. there are 3 such processes running
[2025-10-13 14:58:28] 2025-10-13 05:58:08,599 | INFO     | --- collectZombieJob: --- 10, [546263]
[2025-10-13 14:58:28] 2025-10-13 05:58:08,599 | INFO     | zombie collector waiting for pid 546263
[2025-10-13 14:58:28] 2025-10-13 05:58:08,599 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 14:58:28] 2025-10-13 05:58:08,600 | INFO     | collected zombie processes
[2025-10-13 14:58:28] 2025-10-13 05:58:08,600 | INFO     | will attempt to kill all subprocesses of pid=546263
[2025-10-13 14:58:28] 2025-10-13 05:58:08,704 | INFO     | process IDs to be killed: [546263] (in reverse order)
[2025-10-13 14:58:28] 2025-10-13 05:58:08,744 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 14:58:28] 2025-10-13 05:58:08,744 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 14:58:28] 2025-10-13 05:58:08,749 | INFO     | did not find any defunct processes belonging to 546263
[2025-10-13 14:58:28] 2025-10-13 05:58:08,753 | INFO     | did not find any defunct processes belonging to 546263
[2025-10-13 14:58:28] 2025-10-13 05:58:08,753 | INFO     | ready for new job
[2025-10-13 14:58:28] 2025-10-13 05:58:08,753 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 14:58:28] 2025-10-13 05:58:08,754 | INFO     | ***************************************
[2025-10-13 14:58:28] 2025-10-13 05:58:08,755 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 14:58:28] 2025-10-13 05:58:08,755 | INFO     | ***************************************
[2025-10-13 14:58:28] 2025-10-13 05:58:08,755 | INFO     | 
[2025-10-13 14:58:28] 2025-10-13 05:58:08,756 | INFO     | architecture information:
[2025-10-13 14:58:28] 2025-10-13 05:58:08,756 | INFO     | executing command: cat /etc/os-release
[2025-10-13 14:58:28] 2025-10-13 05:58:08,767 | INFO     | cat /etc/os-release:
[2025-10-13 14:58:28] NAME="CentOS Linux"
[2025-10-13 14:58:28] VERSION="7 (Core)"
[2025-10-13 14:58:28] ID="centos"
[2025-10-13 14:58:28] ID_LIKE="rhel fedora"
[2025-10-13 14:58:28] VERSION_ID="7"
[2025-10-13 14:58:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 14:58:28] ANSI_COLOR="0;31"
[2025-10-13 14:58:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 14:58:28] HOME_URL="https://www.centos.org/"
[2025-10-13 14:58:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 14:58:28] 
[2025-10-13 14:58:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 14:58:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 14:58:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 14:58:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 14:58:28] 
[2025-10-13 14:58:28] 2025-10-13 05:58:08,767 | INFO     | ***************************************
[2025-10-13 14:58:28] 2025-10-13 05:58:09,270 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-10-13 14:58:28] 2025-10-13 05:58:09,277 | INFO     | sufficient remaining disk space (279569235968 B)
[2025-10-13 14:58:28] 2025-10-13 05:58:09,277 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 14:58:28] 2025-10-13 05:58:09,278 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 14:58:28] 2025-10-13 05:58:09,278 | INFO     | update_server=False
[2025-10-13 14:58:28] 2025-10-13 05:58:09,278 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 14:58:28] 2025-10-13 05:58:09,278 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 14:58:28] 2025-10-13 05:58:09,278 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 14:58:28] 2025-10-13 05:58:09,278 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 14:58:28] 2025-10-13 05:58:09,278 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 14:58:28] 2025-10-13 05:58:09,278 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 14:58:28] 2025-10-13 05:58:09,468 | INFO     | all data control threads have been joined
[2025-10-13 14:58:28] 2025-10-13 05:58:09,744 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 14:58:28] 2025-10-13 05:58:09,873 | INFO     | all payload control threads have been joined
[2025-10-13 14:58:28] 2025-10-13 05:58:09,924 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 14:58:28] 2025-10-13 05:58:09,924 | INFO     | aborting loop
[2025-10-13 14:58:28] 2025-10-13 05:58:10,166 | INFO     | all job control threads have been joined
[2025-10-13 14:58:28] 2025-10-13 05:58:10,283 | INFO     | [job] retrieve thread has finished
[2025-10-13 14:58:28] 2025-10-13 05:58:10,283 | INFO     | [job] queue monitor thread has finished
[2025-10-13 14:58:28] 2025-10-13 05:58:10,377 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 14:58:28] 2025-10-13 05:58:10,473 | INFO     | [data] control thread has finished
[2025-10-13 14:58:28] 2025-10-13 05:58:10,514 | INFO     | [payload] validate_post thread has finished
[2025-10-13 14:58:28] 2025-10-13 05:58:10,856 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 14:58:28] 2025-10-13 05:58:10,878 | INFO     | [payload] control thread has finished
[2025-10-13 14:58:28] 2025-10-13 05:58:10,929 | INFO     | [job] job monitor thread has finished
[2025-10-13 14:58:28] 2025-10-13 05:58:11,170 | INFO     | [job] control thread has finished
[2025-10-13 14:58:28] 2025-10-13 05:58:11,353 | INFO     | [payload] failed_post thread has finished
[2025-10-13 14:58:28] 2025-10-13 05:58:11,567 | INFO     | [job] validate thread has finished
[2025-10-13 14:58:28] 2025-10-13 05:58:11,570 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 14:58:28] 2025-10-13 05:58:11,623 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 14:58:28] 2025-10-13 05:58:11,647 | INFO     | [data] copytool_in thread has finished
[2025-10-13 14:58:28] 2025-10-13 05:58:11,750 | INFO     | [data] copytool_out thread has finished
[2025-10-13 14:58:28] 2025-10-13 05:58:14,862 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 14:58:28] 2025-10-13 05:58:19,510 | INFO     | job.realtimelogging is not enabled
[2025-10-13 14:58:28] 2025-10-13 05:58:20,510 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 14:58:28] 2025-10-13 05:58:22,041 | INFO     | [monitor] cgroup control has ended
[2025-10-13 14:58:28] 2025-10-13 05:58:23,059 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140709759616832)>', '<ExcThread(monitor, started 140709252273920)>']
[2025-10-13 14:58:28] 2025-10-13 05:58:23,337 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 14:58:28] 2025-10-13 05:58:23,338 | INFO     | [monitor] control thread has ended
[2025-10-13 14:58:28] 2025-10-13 05:58:28,069 | INFO     | all workflow threads have been joined
[2025-10-13 14:58:28] 2025-10-13 05:58:28,069 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 14:58:28] 2025-10-13 05:58:28,069 | INFO     | traces error code: 0
[2025-10-13 14:58:28] 2025-10-13 05:58:28,069 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 14:58:28] 2025-10-13 05:58:28,122 [wrapper] ==== pilot stdout END ====
[2025-10-13 14:58:28] 2025-10-13 05:58:28,123 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 14:58:28] 2025-10-13 05:58:28,124 [wrapper] pilotpid: 526026
[2025-10-13 14:58:28] 2025-10-13 05:58:28,125 [wrapper] Pilot exit status: 0
[2025-10-13 14:58:28] 2025-10-13 05:58:28,129 [wrapper] pandaids: 6835984647
[2025-10-13 14:58:28] 2025-10-13 05:58:28,141 [wrapper] cleanup supervisor_pilot  582016 526027
[2025-10-13 14:58:28] 2025-10-13 05:58:28,143 [wrapper] Test setup, not cleaning
[2025-10-13 14:58:28] 2025-10-13 05:58:28,143 [wrapper] apfmon messages muted
[2025-10-13 14:58:28] 2025-10-13 05:58:28,144 [wrapper] ==== wrapper stdout END ====
[2025-10-13 14:58:28] 2025-10-13 05:58:28,146 [wrapper] ==== wrapper stderr END ====
[2025-10-13 14:58:28]  *** Error codes and diagnostics ***
[2025-10-13 14:58:28]     "exeErrorCode": 0,
[2025-10-13 14:58:28]     "exeErrorDiag": "",
[2025-10-13 14:58:28]     "pilotErrorCode": 0,
[2025-10-13 14:58:28]     "pilotErrorDiag": "",
[2025-10-13 14:58:28]  *** Listing of results directory ***
[2025-10-13 14:58:28] total 409512
[2025-10-13 14:58:28] -rw-r--r--. 1 boinc boinc    557409 Oct  8 19:04 pilot3.tar.gz
[2025-10-13 14:58:28] -rw-r--r--. 1 boinc boinc      5112 Oct  8 19:17 queuedata.json
[2025-10-13 14:58:28] -rwx------. 1 boinc boinc     36292 Oct  8 19:17 runpilot2-wrapper.sh
[2025-10-13 14:58:28] -rw-r--r--. 1 boinc boinc       100 Oct 13 13:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 14:58:28] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 13:48 run_atlas
[2025-10-13 14:58:28] -rw-r--r--. 1 boinc boinc       105 Oct 13 13:48 job.xml
[2025-10-13 14:58:28] -rw-r--r--. 2 boinc boinc     15120 Oct 13 13:48 start_atlas.sh
[2025-10-13 14:58:28] drwxrwx--x. 2 boinc boinc        68 Oct 13 13:48 shared
[2025-10-13 14:58:28] -rw-r--r--. 2 boinc boinc    569682 Oct 13 13:48 input.tar.gz
[2025-10-13 14:58:28] -rw-r--r--. 1 boinc boinc      9509 Oct 13 13:48 init_data.xml
[2025-10-13 14:58:28] -rw-r--r--. 2 boinc boinc 220602892 Oct 13 13:48 EVNT.46676267._000228.pool.root.1
[2025-10-13 14:58:28] -rw-r--r--. 1 boinc boinc         0 Oct 13 13:48 boinc_lockfile
[2025-10-13 14:58:28] -rw-r--r--. 1 boinc boinc      2548 Oct 13 13:48 pandaJob.out
[2025-10-13 14:58:28] -rw-------. 1 boinc boinc    974365 Oct 13 13:48 agis_schedconf.cvmfs.json
[2025-10-13 14:58:28] -rw-------. 1 boinc boinc   1560580 Oct 13 13:48 agis_ddmendpoints.agis.ALL.json
[2025-10-13 14:58:28] drwx------. 5 boinc boinc      4096 Oct 13 13:48 pilot3
[2025-10-13 14:58:28] -rw-------. 1 boinc boinc 192982388 Oct 13 14:57 HITS.46676269._005650.pool.root.1
[2025-10-13 14:58:28] -rw-r--r--. 1 boinc boinc       529 Oct 13 14:57 boinc_task_state.xml
[2025-10-13 14:58:28] -rw-------. 1 boinc boinc      1021 Oct 13 14:57 memory_monitor_summary.json
[2025-10-13 14:58:28] -rw-------. 1 boinc boinc    296552 Oct 13 14:57 log.46676269._005650.job.log.tgz.1
[2025-10-13 14:58:28] -rw-------. 1 boinc boinc        95 Oct 13 14:57 pilot_heartbeat.json
[2025-10-13 14:58:28] -rw-------. 1 boinc boinc      7761 Oct 13 14:58 heartbeat.json
[2025-10-13 14:58:28] -rw-r--r--. 1 boinc boinc        27 Oct 13 14:58 wrapper_checkpoint.txt
[2025-10-13 14:58:28] -rw-r--r--. 1 boinc boinc      8192 Oct 13 14:58 boinc_mmap_file
[2025-10-13 14:58:28] -rw-------. 1 boinc boinc      4625 Oct 13 14:58 pilotlog.txt
[2025-10-13 14:58:28] -rw-------. 1 boinc boinc    634615 Oct 13 14:58 log.46676269._005650.job.log.1
[2025-10-13 14:58:28] -rw-------. 1 boinc boinc       357 Oct 13 14:58 output.list
[2025-10-13 14:58:28] -rw-r--r--. 1 boinc boinc       620 Oct 13 14:58 runtime_log
[2025-10-13 14:58:28] -rw-------. 1 boinc boinc    952320 Oct 13 14:58 result.tar.gz
[2025-10-13 14:58:28] -rw-r--r--. 1 boinc boinc      8661 Oct 13 14:58 runtime_log.err
[2025-10-13 14:58:28] -rw-------. 1 boinc boinc       640 Oct 13 14:58 o8gMDmsPgQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDmPaMMDmz4ZDEm.diag
[2025-10-13 14:58:28] -rw-r--r--. 1 boinc boinc     21866 Oct 13 14:58 stderr.txt
[2025-10-13 14:58:28] HITS file was successfully produced:
[2025-10-13 14:58:28] -rw-------. 1 boinc boinc 192982388 Oct 13 14:57 shared/HITS.pool.root.1
[2025-10-13 14:58:28]  *** Contents of shared directory: ***
[2025-10-13 14:58:28] total 405404
[2025-10-13 14:58:28] -rw-r--r--. 2 boinc boinc     15120 Oct 13 13:48 start_atlas.sh
[2025-10-13 14:58:28] -rw-r--r--. 2 boinc boinc    569682 Oct 13 13:48 input.tar.gz
[2025-10-13 14:58:28] -rw-r--r--. 2 boinc boinc 220602892 Oct 13 13:48 ATLAS.root_0
[2025-10-13 14:58:28] -rw-------. 1 boinc boinc 192982388 Oct 13 14:57 HITS.pool.root.1
[2025-10-13 14:58:28] -rw-------. 1 boinc boinc    952320 Oct 13 14:58 result.tar.gz
14:58:29 (522209): run_atlas exited; CPU time 22575.032284
14:58:29 (522209): called boinc_finish(0)

</stderr_txt>
]]>

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