Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
23:25:05 (1352801): wrapper (7.7.26015): starting
23:25:05 (1352801): wrapper: running run_atlas (--nthreads 5)
[2025-10-12 23:25:05] Arguments: --nthreads 5
[2025-10-12 23:25:05] Threads: 5
[2025-10-12 23:25:05] Checking for CVMFS
[2025-10-12 23:25:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 23:25:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 23:25:05] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 23:25:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 23:25:05] 2.11.0.0 2490241 4031 106392 151647 0 187 2738695 4096000 6205 130560 0 20260153 99.998 281204 4708 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 23:25:05] CVMFS is ok
[2025-10-12 23:25:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 23:25:05] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 23:25:05] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 23:25:05] Further information can be found at the LHC@home message board.
[2025-10-12 23:25:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 23:25:05] Checking for apptainer binary...
[2025-10-12 23:25:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 23:25:05] Running /usr/bin/apptainer --version
[2025-10-12 23:25:05] apptainer version 1.4.3
[2025-10-12 23:25:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 23:25:05] x32-linux4
[2025-10-12 23:25:05] apptainer works
[2025-10-12 23:25:05] Set ATHENA_PROC_NUMBER=5
[2025-10-12 23:25:05] Set ATHENA_CORE_NUMBER=5
[2025-10-12 23:25:05] Starting ATLAS job with PandaID=6840429423
[2025-10-12 23:25:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 01:22:34]  *** The last 200 lines of the pilot log: ***
[2025-10-13 01:22:34] 2025-10-13 05:21:51,862 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 01:22:34] 2025-10-13 05:21:51,863 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 01:22:34] 2025-10-13 05:21:51,863 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 01:22:34] 2025-10-13 05:21:51,864 | INFO     | fitting pss+swap vs Time
[2025-10-13 01:22:34] 2025-10-13 05:21:51,865 | INFO     | sum of square deviations: 471562330.0
[2025-10-13 01:22:34] 2025-10-13 05:21:51,865 | INFO     | sum of deviations: -7014335527.0
[2025-10-13 01:22:34] 2025-10-13 05:21:51,865 | INFO     | mean x: 1760329419.0
[2025-10-13 01:22:34] 2025-10-13 05:21:51,865 | INFO     | mean y: 2366135.495652174
[2025-10-13 01:22:34] 2025-10-13 05:21:51,865 | INFO     | -- intersect: 26186690873.46819
[2025-10-13 01:22:34] 2025-10-13 05:21:51,865 | INFO     | intersect: 26186690873.46819
[2025-10-13 01:22:34] 2025-10-13 05:21:51,865 | INFO     | chi2: 1.804489880217516
[2025-10-13 01:22:34] 2025-10-13 05:21:51,866 | INFO     | sum of square deviations: 412686807.5
[2025-10-13 01:22:34] 2025-10-13 05:21:51,866 | INFO     | sum of deviations: 119338173.50000049
[2025-10-13 01:22:34] 2025-10-13 05:21:51,866 | INFO     | mean x: 1760329266.5
[2025-10-13 01:22:34] 2025-10-13 05:21:51,866 | INFO     | mean y: 2384010.6454545455
[2025-10-13 01:22:34] 2025-10-13 05:21:51,866 | INFO     | -- intersect: -506656926.94910526
[2025-10-13 01:22:34] 2025-10-13 05:21:51,866 | INFO     | intersect: -506656926.94910526
[2025-10-13 01:22:34] 2025-10-13 05:21:51,866 | INFO     | chi2: 1.1396514645228906
[2025-10-13 01:22:34] 2025-10-13 05:21:51,866 | INFO     | current chi2=1.1396514645228906 (change=36.843565762446104 %)
[2025-10-13 01:22:34] 2025-10-13 05:21:51,867 | INFO     | sum of square deviations: 358927660.0
[2025-10-13 01:22:34] 2025-10-13 05:21:51,867 | INFO     | sum of deviations: 485092008.00000256
[2025-10-13 01:22:34] 2025-10-13 05:21:51,867 | INFO     | mean x: 1760329114.0
[2025-10-13 01:22:34] 2025-10-13 05:21:51,867 | INFO     | mean y: 2385048.9714285713
[2025-10-13 01:22:34] 2025-10-13 05:21:51,867 | INFO     | -- intersect: -2376706004.226103
[2025-10-13 01:22:34] 2025-10-13 05:21:51,867 | INFO     | intersect: -2376706004.226103
[2025-10-13 01:22:34] 2025-10-13 05:21:51,867 | INFO     | chi2: 1.1411481366944323
[2025-10-13 01:22:34] 2025-10-13 05:21:51,867 | INFO     | current chi2=1.1411481366944323 (change=-0.13132718362874884 %)
[2025-10-13 01:22:34] 2025-10-13 05:21:51,868 | INFO     | right removable region: 104
[2025-10-13 01:22:34] 2025-10-13 05:21:51,868 | INFO     | sum of square deviations: 412686807.5
[2025-10-13 01:22:34] 2025-10-13 05:21:51,868 | INFO     | sum of deviations: -17534602134.0
[2025-10-13 01:22:34] 2025-10-13 05:21:51,868 | INFO     | mean x: 1760329571.5
[2025-10-13 01:22:34] 2025-10-13 05:21:51,868 | INFO     | mean y: 2392546.2181818183
[2025-10-13 01:22:34] 2025-10-13 05:21:51,868 | INFO     | -- intersect: 74796832542.86674
[2025-10-13 01:22:34] 2025-10-13 05:21:51,868 | INFO     | intersect: 74796832542.86674
[2025-10-13 01:22:34] 2025-10-13 05:21:51,868 | INFO     | chi2: 0.7125763692343333
[2025-10-13 01:22:34] 2025-10-13 05:21:51,869 | INFO     | current chi2=0.7125763692343333 (change=60.51092460831988 %)
[2025-10-13 01:22:34] 2025-10-13 05:21:51,869 | INFO     | sum of square deviations: 358927660.0
[2025-10-13 01:22:34] 2025-10-13 05:21:51,869 | INFO     | sum of deviations: -15428127258.999998
[2025-10-13 01:22:34] 2025-10-13 05:21:51,869 | INFO     | mean x: 1760329724.0
[2025-10-13 01:22:34] 2025-10-13 05:21:51,869 | INFO     | mean y: 2386554.780952381
[2025-10-13 01:22:34] 2025-10-13 05:21:51,869 | INFO     | -- intersect: 75668304861.75217
[2025-10-13 01:22:34] 2025-10-13 05:21:51,869 | INFO     | intersect: 75668304861.75217
[2025-10-13 01:22:34] 2025-10-13 05:21:51,870 | INFO     | chi2: 0.7128881022638818
[2025-10-13 01:22:34] 2025-10-13 05:21:51,870 | INFO     | current chi2=0.7128881022638818 (change=-0.0437473150959825 %)
[2025-10-13 01:22:34] 2025-10-13 05:21:51,870 | INFO     | left removable region: 20
[2025-10-13 01:22:34] 2025-10-13 05:21:51,870 | INFO     | sum of square deviations: 183761585.0
[2025-10-13 01:22:34] 2025-10-13 05:21:51,870 | INFO     | sum of deviations: -5771746708.500001
[2025-10-13 01:22:34] 2025-10-13 05:21:51,870 | INFO     | mean x: 1760329693.5
[2025-10-13 01:22:34] 2025-10-13 05:21:51,870 | INFO     | mean y: 2401901.964285714
[2025-10-13 01:22:34] 2025-10-13 05:21:51,870 | INFO     | -- intersect: 55292396893.754555
[2025-10-13 01:22:34] 2025-10-13 05:21:51,870 | INFO     | intersect: 55292396893.754555
[2025-10-13 01:22:34] 2025-10-13 05:21:51,870 | INFO     | chi2: 0.01926835034786236
[2025-10-13 01:22:34] 2025-10-13 05:21:51,871 | INFO     | -- intersect: 55292396893.754555
[2025-10-13 01:22:34] 2025-10-13 05:21:51,871 | INFO     | current memory leak: -31.41 B/s (using 84 data points, chi2=0.02)
[2025-10-13 01:22:34] 2025-10-13 05:21:51,871 | INFO     | could have reported an average CPU frequency of 3823 MHz (7 samples)
[2025-10-13 01:22:34] 2025-10-13 05:21:51,871 | INFO     | ..............................
[2025-10-13 01:22:34] 2025-10-13 05:21:51,871 | INFO     | . Timing measurements:
[2025-10-13 01:22:34] 2025-10-13 05:21:51,871 | INFO     | . get job = 0 s
[2025-10-13 01:22:34] 2025-10-13 05:21:51,871 | INFO     | . initial setup = 2 s
[2025-10-13 01:22:34] 2025-10-13 05:21:51,871 | INFO     | . payload setup = 4 s
[2025-10-13 01:22:34] 2025-10-13 05:21:51,871 | INFO     | . stage-in = 0 s
[2025-10-13 01:22:34] 2025-10-13 05:21:51,871 | INFO     | . payload execution = 6961 s
[2025-10-13 01:22:34] 2025-10-13 05:21:51,871 | INFO     | . stage-out = 0 s
[2025-10-13 01:22:34] 2025-10-13 05:21:51,871 | INFO     | . log creation = 0 s
[2025-10-13 01:22:34] 2025-10-13 05:21:51,871 | INFO     | ..............................
[2025-10-13 01:22:34] 2025-10-13 05:21:51,940 | INFO     | 
[2025-10-13 01:22:34] 2025-10-13 05:21:51,940 | INFO     | job summary report
[2025-10-13 01:22:34] 2025-10-13 05:21:51,940 | INFO     | --------------------------------------------------
[2025-10-13 01:22:34] 2025-10-13 05:21:51,940 | INFO     | PanDA job id: 6840429423
[2025-10-13 01:22:34] 2025-10-13 05:21:51,941 | INFO     | task id: 46676269
[2025-10-13 01:22:34] 2025-10-13 05:21:51,941 | INFO     | errors: (none)
[2025-10-13 01:22:34] 2025-10-13 05:21:51,941 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 01:22:34] 2025-10-13 05:21:51,941 | INFO     | pilot state: finished 
[2025-10-13 01:22:34] 2025-10-13 05:21:51,941 | INFO     | transexitcode: 0
[2025-10-13 01:22:34] 2025-10-13 05:21:51,941 | INFO     | exeerrorcode: 0
[2025-10-13 01:22:34] 2025-10-13 05:21:51,941 | INFO     | exeerrordiag: 
[2025-10-13 01:22:34] 2025-10-13 05:21:51,941 | INFO     | exitcode: 0
[2025-10-13 01:22:34] 2025-10-13 05:21:51,941 | INFO     | exitmsg: OK
[2025-10-13 01:22:34] 2025-10-13 05:21:51,941 | INFO     | cpuconsumptiontime: 27265 s
[2025-10-13 01:22:34] 2025-10-13 05:21:51,941 | INFO     | nevents: 400
[2025-10-13 01:22:34] 2025-10-13 05:21:51,941 | INFO     | neventsw: 0
[2025-10-13 01:22:34] 2025-10-13 05:21:51,941 | INFO     | pid: 1363299
[2025-10-13 01:22:34] 2025-10-13 05:21:51,941 | INFO     | pgrp: 1363299
[2025-10-13 01:22:34] 2025-10-13 05:21:51,941 | INFO     | corecount: 5
[2025-10-13 01:22:34] 2025-10-13 05:21:51,941 | INFO     | event service: False
[2025-10-13 01:22:34] 2025-10-13 05:21:51,941 | INFO     | sizes: {0: 2348892, 4: 2349154, 11: 2349182, 6969: 2376489, 6970: 2376488, 6971: 2385740, 6981: 2385906}
[2025-10-13 01:22:34] 2025-10-13 05:21:51,941 | INFO     | --------------------------------------------------
[2025-10-13 01:22:34] 2025-10-13 05:21:51,941 | INFO     | 
[2025-10-13 01:22:34] 2025-10-13 05:21:51,941 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/7
[2025-10-13 01:22:34] 2025-10-13 05:21:51,958 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 01:22:34] 2025-10-13 05:21:51,959 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 01:22:34] 2025-10-13 05:21:51,959 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 01:22:34] 2025-10-13 05:21:51,959 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 01:22:34] 2025-10-13 05:21:51,959 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 01:22:34] 2025-10-13 05:21:51,959 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 01:22:34] 2025-10-13 05:21:51,959 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 01:22:34] 2025-10-13 05:21:51,959 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 01:22:34] 2025-10-13 05:21:51,959 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 01:22:34] 2025-10-13 05:21:51,959 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 01:22:34] 2025-10-13 05:21:51,959 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 01:22:34] 2025-10-13 05:21:51,959 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 01:22:34] 2025-10-13 05:21:51,959 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 01:22:34] 2025-10-13 05:21:51,959 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 01:22:34] 2025-10-13 05:21:51,959 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 01:22:34] 2025-10-13 05:21:51,959 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 01:22:34] 2025-10-13 05:21:51,960 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 01:22:34] 2025-10-13 05:21:51,960 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 01:22:34] 2025-10-13 05:21:51,960 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 01:22:34] 2025-10-13 05:21:51,960 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 01:22:34] 2025-10-13 05:21:51,960 | INFO     | job 6840429423 has completed (purged errors)
[2025-10-13 01:22:34] 2025-10-13 05:21:51,960 | INFO     | overall cleanup function is called
[2025-10-13 01:22:34] 2025-10-13 05:21:52,969 | INFO     | --- collectZombieJob: --- 10, [1363299]
[2025-10-13 01:22:34] 2025-10-13 05:21:52,969 | INFO     | zombie collector waiting for pid 1363299
[2025-10-13 01:22:34] 2025-10-13 05:21:52,969 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 01:22:34] 2025-10-13 05:21:52,969 | INFO     | collected zombie processes
[2025-10-13 01:22:34] 2025-10-13 05:21:52,969 | INFO     | will attempt to kill all subprocesses of pid=1363299
[2025-10-13 01:22:34] 2025-10-13 05:21:53,124 | INFO     | process IDs to be killed: [1363299] (in reverse order)
[2025-10-13 01:22:34] 2025-10-13 05:21:53,236 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 01:22:34] 2025-10-13 05:21:53,237 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 01:22:34] 2025-10-13 05:21:53,241 | INFO     | did not find any defunct processes belonging to 1363299
[2025-10-13 01:22:34] 2025-10-13 05:21:53,249 | INFO     | did not find any defunct processes belonging to 1363299
[2025-10-13 01:22:34] 2025-10-13 05:21:53,249 | INFO     | ready for new job
[2025-10-13 01:22:34] 2025-10-13 05:21:53,249 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 01:22:34] 2025-10-13 05:21:53,250 | INFO     | ***************************************
[2025-10-13 01:22:34] 2025-10-13 05:21:53,250 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 01:22:34] 2025-10-13 05:21:53,251 | INFO     | ***************************************
[2025-10-13 01:22:34] 2025-10-13 05:21:53,251 | INFO     | 
[2025-10-13 01:22:34] 2025-10-13 05:21:53,252 | INFO     | architecture information:
[2025-10-13 01:22:34] 2025-10-13 05:21:53,252 | INFO     | executing command: cat /etc/os-release
[2025-10-13 01:22:34] 2025-10-13 05:21:53,269 | INFO     | cat /etc/os-release:
[2025-10-13 01:22:34] NAME="CentOS Linux"
[2025-10-13 01:22:34] VERSION="7 (Core)"
[2025-10-13 01:22:34] ID="centos"
[2025-10-13 01:22:34] ID_LIKE="rhel fedora"
[2025-10-13 01:22:34] VERSION_ID="7"
[2025-10-13 01:22:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 01:22:34] ANSI_COLOR="0;31"
[2025-10-13 01:22:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 01:22:34] HOME_URL="https://www.centos.org/"
[2025-10-13 01:22:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 01:22:34] 
[2025-10-13 01:22:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 01:22:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 01:22:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 01:22:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 01:22:34] 
[2025-10-13 01:22:34] 2025-10-13 05:21:53,269 | INFO     | ***************************************
[2025-10-13 01:22:34] 2025-10-13 05:21:53,772 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/7
[2025-10-13 01:22:34] 2025-10-13 05:21:53,786 | INFO     | sufficient remaining disk space (148622016512 B)
[2025-10-13 01:22:34] 2025-10-13 05:21:53,786 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 01:22:34] 2025-10-13 05:21:53,786 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 01:22:34] 2025-10-13 05:21:53,787 | INFO     | update_server=False
[2025-10-13 01:22:34] 2025-10-13 05:21:53,787 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 01:22:34] 2025-10-13 05:21:53,787 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:22:34] 2025-10-13 05:21:53,787 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 01:22:34] 2025-10-13 05:21:53,787 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 01:22:34] 2025-10-13 05:21:54,456 | INFO     | all data control threads have been joined
[2025-10-13 01:22:34] 2025-10-13 05:21:54,744 | INFO     | all job control threads have been joined
[2025-10-13 01:22:34] 2025-10-13 05:21:54,761 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:22:34] 2025-10-13 05:21:54,761 | INFO     | aborting loop
[2025-10-13 01:22:34] 2025-10-13 05:21:54,792 | INFO     | [job] queue monitor thread has finished
[2025-10-13 01:22:34] 2025-10-13 05:21:54,792 | INFO     | [job] retrieve thread has finished
[2025-10-13 01:22:34] 2025-10-13 05:21:54,875 | INFO     | [payload] validate_post thread has finished
[2025-10-13 01:22:34] 2025-10-13 05:21:55,219 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 01:22:34] 2025-10-13 05:21:55,244 | INFO     | all payload control threads have been joined
[2025-10-13 01:22:34] 2025-10-13 05:21:55,461 | INFO     | [data] control thread has finished
[2025-10-13 01:22:34] 2025-10-13 05:21:55,582 | INFO     | [job] validate thread has finished
[2025-10-13 01:22:34] 2025-10-13 05:21:55,595 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 01:22:34] 2025-10-13 05:21:55,714 | INFO     | [payload] failed_post thread has finished
[2025-10-13 01:22:34] 2025-10-13 05:21:55,749 | INFO     | [job] control thread has finished
[2025-10-13 01:22:34] 2025-10-13 05:21:55,766 | INFO     | [job] job monitor thread has finished
[2025-10-13 01:22:34] 2025-10-13 05:21:55,792 | INFO     | [data] copytool_out thread has finished
[2025-10-13 01:22:34] 2025-10-13 05:21:55,832 | INFO     | [data] copytool_in thread has finished
[2025-10-13 01:22:34] 2025-10-13 05:21:55,832 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 01:22:34] 2025-10-13 05:21:55,896 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 01:22:34] 2025-10-13 05:21:56,252 | INFO     | [payload] control thread has finished
[2025-10-13 01:22:34] 2025-10-13 05:21:57,792 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 01:22:34] 2025-10-13 05:22:23,247 | INFO     | PID=1356635 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 01:22:34] 2025-10-13 05:22:23,248 | INFO     | .. there are 8 such processes running
[2025-10-13 01:22:34] 2025-10-13 05:22:23,248 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 01:22:34] 2025-10-13 05:22:23,248 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 01:22:34] 2025-10-13 05:22:23,248 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 01:22:34] 2025-10-13 05:22:27,952 | INFO     | [monitor] cgroup control has ended
[2025-10-13 01:22:34] 2025-10-13 05:22:29,223 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133817270314816)>', '<ExcThread(monitor, started 133816928683776)>']
[2025-10-13 01:22:34] 2025-10-13 05:22:29,277 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 01:22:34] 2025-10-13 05:22:29,277 | INFO     | [monitor] control thread has ended
[2025-10-13 01:22:34] 2025-10-13 05:22:34,248 | INFO     | all workflow threads have been joined
[2025-10-13 01:22:34] 2025-10-13 05:22:34,248 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 01:22:34] 2025-10-13 05:22:34,248 | INFO     | traces error code: 0
[2025-10-13 01:22:34] 2025-10-13 05:22:34,249 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 01:22:34] 2025-10-13 05:22:34,320 [wrapper] ==== pilot stdout END ====
[2025-10-13 01:22:34] 2025-10-13 05:22:34,323 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 01:22:34] 2025-10-13 05:22:34,325 [wrapper] pilotpid: 1356635
[2025-10-13 01:22:34] 2025-10-13 05:22:34,327 [wrapper] Pilot exit status: 0
[2025-10-13 01:22:34] 2025-10-13 05:22:34,336 [wrapper] pandaids: 6840429423
[2025-10-13 01:22:34] 2025-10-13 05:22:34,372 [wrapper] cleanup supervisor_pilot 1541340 1356636
[2025-10-13 01:22:34] 2025-10-13 05:22:34,375 [wrapper] Test setup, not cleaning
[2025-10-13 01:22:34] 2025-10-13 05:22:34,377 [wrapper] apfmon messages muted
[2025-10-13 01:22:34] 2025-10-13 05:22:34,379 [wrapper] ==== wrapper stdout END ====
[2025-10-13 01:22:34] 2025-10-13 05:22:34,381 [wrapper] ==== wrapper stderr END ====
[2025-10-13 01:22:34]  *** Error codes and diagnostics ***
[2025-10-13 01:22:34]     "exeErrorCode": 0,
[2025-10-13 01:22:34]     "exeErrorDiag": "",
[2025-10-13 01:22:34]     "pilotErrorCode": 0,
[2025-10-13 01:22:34]     "pilotErrorDiag": "",
[2025-10-13 01:22:34]  *** Listing of results directory ***
[2025-10-13 01:22:34] total 411124
[2025-10-13 01:22:34] -rw-r--r-- 1 boinc boinc    557409 Oct 12 13:17 pilot3.tar.gz
[2025-10-13 01:22:34] -rwx------ 1 boinc boinc     36292 Oct 12 13:23 runpilot2-wrapper.sh
[2025-10-13 01:22:34] -rw-r--r-- 1 boinc boinc      5112 Oct 12 13:23 queuedata.json
[2025-10-13 01:22:34] -rw-r--r-- 1 boinc boinc       100 Oct 12 23:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 01:22:34] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 23:25 run_atlas
[2025-10-13 01:22:34] -rw-r--r-- 1 boinc boinc       105 Oct 12 23:25 job.xml
[2025-10-13 01:22:34] -rw-r--r-- 2 boinc boinc 220812809 Oct 12 23:25 EVNT.46676267._004815.pool.root.1
[2025-10-13 01:22:34] -rw-r--r-- 2 boinc boinc     15120 Oct 12 23:25 start_atlas.sh
[2025-10-13 01:22:34] drwxrwx--x 2 boinc boinc      4096 Oct 12 23:25 shared
[2025-10-13 01:22:34] -rw-r--r-- 2 boinc boinc    569676 Oct 12 23:25 input.tar.gz
[2025-10-13 01:22:34] -rw-r--r-- 1 boinc boinc      9723 Oct 12 23:25 init_data.xml
[2025-10-13 01:22:34] -rw-r--r-- 1 boinc boinc         0 Oct 12 23:25 boinc_setup_complete
[2025-10-13 01:22:34] -rw-r--r-- 1 boinc boinc         0 Oct 12 23:25 boinc_lockfile
[2025-10-13 01:22:34] -rw-r--r-- 1 boinc boinc      2550 Oct 12 23:25 pandaJob.out
[2025-10-13 01:22:34] -rw------- 1 boinc boinc    974373 Oct 12 23:25 agis_schedconf.cvmfs.json
[2025-10-13 01:22:34] -rw------- 1 boinc boinc   1560580 Oct 12 23:25 agis_ddmendpoints.agis.ALL.json
[2025-10-13 01:22:34] drwx------ 5 boinc boinc      4096 Oct 12 23:25 pilot3
[2025-10-13 01:22:34] -rw------- 1 boinc boinc 193578760 Oct 13 01:21 HITS.46676269._084769.pool.root.1
[2025-10-13 01:22:34] -rw-r--r-- 1 boinc boinc       529 Oct 13 01:21 boinc_task_state.xml
[2025-10-13 01:22:34] -rw------- 1 boinc boinc      1025 Oct 13 01:21 memory_monitor_summary.json
[2025-10-13 01:22:34] -rw------- 1 boinc boinc    327765 Oct 13 01:21 log.46676269._084769.job.log.tgz.1
[2025-10-13 01:22:34] -rw------- 1 boinc boinc      7748 Oct 13 01:21 heartbeat.json
[2025-10-13 01:22:34] -rw------- 1 boinc boinc        95 Oct 13 01:22 pilot_heartbeat.json
[2025-10-13 01:22:34] -rw-r--r-- 1 boinc boinc      8192 Oct 13 01:22 boinc_mmap_file
[2025-10-13 01:22:34] -rw-r--r-- 1 boinc boinc        27 Oct 13 01:22 wrapper_checkpoint.txt
[2025-10-13 01:22:34] -rw------- 1 boinc boinc      4831 Oct 13 01:22 pilotlog.txt
[2025-10-13 01:22:34] -rw------- 1 boinc boinc   1018981 Oct 13 01:22 log.46676269._084769.job.log.1
[2025-10-13 01:22:34] -rw------- 1 boinc boinc       357 Oct 13 01:22 output.list
[2025-10-13 01:22:34] -rw-r--r-- 1 boinc boinc       620 Oct 13 01:22 runtime_log
[2025-10-13 01:22:34] -rw------- 1 boinc boinc   1361920 Oct 13 01:22 result.tar.gz
[2025-10-13 01:22:34] -rw------- 1 boinc boinc       644 Oct 13 01:22 spgLDmSyES8n9Rq4apOajLDm4fhM0noT9bVof3QYDm6UUMDmMwA0Wn.diag
[2025-10-13 01:22:34] -rw-r--r-- 1 boinc boinc      8764 Oct 13 01:22 runtime_log.err
[2025-10-13 01:22:34] -rw-r--r-- 1 boinc boinc     20956 Oct 13 01:22 stderr.txt
[2025-10-13 01:22:34] HITS file was successfully produced:
[2025-10-13 01:22:34] -rw------- 1 boinc boinc 193578760 Oct 13 01:21 shared/HITS.pool.root.1
[2025-10-13 01:22:34]  *** Contents of shared directory: ***
[2025-10-13 01:22:34] total 406600
[2025-10-13 01:22:34] -rw-r--r-- 2 boinc boinc 220812809 Oct 12 23:25 ATLAS.root_0
[2025-10-13 01:22:34] -rw-r--r-- 2 boinc boinc     15120 Oct 12 23:25 start_atlas.sh
[2025-10-13 01:22:34] -rw-r--r-- 2 boinc boinc    569676 Oct 12 23:25 input.tar.gz
[2025-10-13 01:22:34] -rw------- 1 boinc boinc 193578760 Oct 13 01:21 HITS.pool.root.1
[2025-10-13 01:22:34] -rw------- 1 boinc boinc   1361920 Oct 13 01:22 result.tar.gz
01:22:35 (1352801): run_atlas exited; CPU time 27360.864765
01:22:35 (1352801): called boinc_finish(0)

</stderr_txt>
]]>

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