Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:45:58 (2138159): wrapper (7.7.26015): starting
22:45:58 (2138159): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 22:45:58] Arguments: --nthreads 8
[2025-10-12 22:45:58] Threads: 8
[2025-10-12 22:45:58] Checking for CVMFS
[2025-10-12 22:45:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 22:45:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 22:45:58] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 22:45:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 22:45:59] 2.13.1.0 5004 6537 103976 151645 2 513 26798789 40960000 25548 16776704 0 23862283 99.821 10719490 31763 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 22:45:59] CVMFS is ok
[2025-10-12 22:45:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 22:45:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 22:45:59] Further information can be found at the LHC@home message board.
[2025-10-12 22:45:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 22:45:59] Checking for apptainer binary...
[2025-10-12 22:45:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 22:45:59] Running /usr/bin/apptainer --version
[2025-10-12 22:46:00] apptainer version 1.4.3-1.el9
[2025-10-12 22:46:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 22:46:00] c-212-12.aglt2.org
[2025-10-12 22:46:00] apptainer works
[2025-10-12 22:46:00] Set ATHENA_PROC_NUMBER=8
[2025-10-12 22:46:00] Set ATHENA_CORE_NUMBER=8
[2025-10-12 22:46:01] Starting ATLAS job with PandaID=6840750107
[2025-10-12 22:46:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 01:49:58]  *** The last 200 lines of the pilot log: ***
[2025-10-13 01:49:58] 2025-10-13 05:49:07,418 | INFO     | time since job start (10954s) is within the limit (172800.0s)
[2025-10-13 01:49:58] 2025-10-13 05:49:08,547 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 01:49:58] 2025-10-13 05:49:08,575 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2940.1716250000004
[2025-10-13 01:49:58] 2025-10-13 05:49:08,736 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6840750107/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 01:49:58] 2025-10-13 05:49:08,737 | INFO     | extracted standard info from prmon json
[2025-10-13 01:49:58] 2025-10-13 05:49:08,737 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 01:49:58] 2025-10-13 05:49:08,737 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 01:49:58] 2025-10-13 05:49:08,737 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 01:49:58] 2025-10-13 05:49:08,737 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 01:49:58] 2025-10-13 05:49:08,741 | INFO     | fitting pss+swap vs Time
[2025-10-13 01:49:58] 2025-10-13 05:49:08,741 | INFO     | sum of square deviations: 1778330093.508384
[2025-10-13 01:49:58] 2025-10-13 05:49:08,742 | INFO     | sum of deviations: 4765253108.357523
[2025-10-13 01:49:58] 2025-10-13 05:49:08,742 | INFO     | mean x: 1760329076.139665
[2025-10-13 01:49:58] 2025-10-13 05:49:08,742 | INFO     | mean y: 2482514.625698324
[2025-10-13 01:49:58] 2025-10-13 05:49:08,742 | INFO     | -- intersect: -4714534664.821318
[2025-10-13 01:49:58] 2025-10-13 05:49:08,742 | INFO     | intersect: -4714534664.821318
[2025-10-13 01:49:58] 2025-10-13 05:49:08,743 | INFO     | chi2: 3.3798005881034747
[2025-10-13 01:49:58] 2025-10-13 05:49:08,743 | INFO     | sum of square deviations: 1633432675.9080532
[2025-10-13 01:49:58] 2025-10-13 05:49:08,744 | INFO     | sum of deviations: 15826972753.551712
[2025-10-13 01:49:58] 2025-10-13 05:49:08,744 | INFO     | mean x: 1760328923.6436782
[2025-10-13 01:49:58] 2025-10-13 05:49:08,744 | INFO     | mean y: 2493889.1379310344
[2025-10-13 01:49:58] 2025-10-13 05:49:08,744 | INFO     | -- intersect: -17054026604.618738
[2025-10-13 01:49:58] 2025-10-13 05:49:08,744 | INFO     | intersect: -17054026604.618738
[2025-10-13 01:49:58] 2025-10-13 05:49:08,744 | INFO     | chi2: 2.709306285413521
[2025-10-13 01:49:58] 2025-10-13 05:49:08,744 | INFO     | current chi2=2.709306285413521 (change=19.838279957995738 %)
[2025-10-13 01:49:58] 2025-10-13 05:49:08,744 | INFO     | right removable region: 173
[2025-10-13 01:49:58] 2025-10-13 05:49:08,745 | INFO     | sum of square deviations: 1633417425.9080532
[2025-10-13 01:49:58] 2025-10-13 05:49:08,745 | INFO     | sum of deviations: -35995652594.17239
[2025-10-13 01:49:58] 2025-10-13 05:49:08,745 | INFO     | mean x: 1760329228.6436782
[2025-10-13 01:49:58] 2025-10-13 05:49:08,745 | INFO     | mean y: 2525088.706896552
[2025-10-13 01:49:58] 2025-10-13 05:49:08,745 | INFO     | -- intersect: 38794935626.63153
[2025-10-13 01:49:58] 2025-10-13 05:49:08,746 | INFO     | intersect: 38794935626.63153
[2025-10-13 01:49:58] 2025-10-13 05:49:08,746 | INFO     | chi2: 0.9770494757369186
[2025-10-13 01:49:58] 2025-10-13 05:49:08,746 | INFO     | current chi2=0.9770494757369186 (change=71.09150524513119 %)
[2025-10-13 01:49:58] 2025-10-13 05:49:08,746 | INFO     | sum of square deviations: 1496597933.3017797
[2025-10-13 01:49:58] 2025-10-13 05:49:08,747 | INFO     | sum of deviations: -37845276415.78106
[2025-10-13 01:49:58] 2025-10-13 05:49:08,747 | INFO     | mean x: 1760329381.147929
[2025-10-13 01:49:58] 2025-10-13 05:49:08,747 | INFO     | mean y: 2527102.9112426033
[2025-10-13 01:49:58] 2025-10-13 05:49:08,747 | INFO     | -- intersect: 44516922405.72143
[2025-10-13 01:49:58] 2025-10-13 05:49:08,747 | INFO     | intersect: 44516922405.72143
[2025-10-13 01:49:58] 2025-10-13 05:49:08,747 | INFO     | chi2: 0.945868785588283
[2025-10-13 01:49:58] 2025-10-13 05:49:08,748 | INFO     | current chi2=0.945868785588283 (change=3.1913112818691394 %)
[2025-10-13 01:49:58] 2025-10-13 05:49:08,748 | INFO     | left removable region: 20
[2025-10-13 01:49:58] 2025-10-13 05:49:08,748 | INFO     | sum of square deviations: 1110500016.836607
[2025-10-13 01:49:58] 2025-10-13 05:49:08,748 | INFO     | sum of deviations: -12080648406.496721
[2025-10-13 01:49:58] 2025-10-13 05:49:08,749 | INFO     | mean x: 1760329503.143791
[2025-10-13 01:49:58] 2025-10-13 05:49:08,749 | INFO     | mean y: 2522298.477124183
[2025-10-13 01:49:58] 2025-10-13 05:49:08,752 | INFO     | -- intersect: 19152384058.62526
[2025-10-13 01:49:58] 2025-10-13 05:49:08,753 | INFO     | intersect: 19152384058.62526
[2025-10-13 01:49:58] 2025-10-13 05:49:08,753 | INFO     | chi2: 0.1671136666225089
[2025-10-13 01:49:58] 2025-10-13 05:49:08,753 | INFO     | -- intersect: 19152384058.62526
[2025-10-13 01:49:58] 2025-10-13 05:49:08,753 | INFO     | current memory leak: -10.88 B/s (using 153 data points, chi2=0.17)
[2025-10-13 01:49:58] 2025-10-13 05:49:08,754 | INFO     | could have reported an average CPU frequency of 2930 MHz (9 samples)
[2025-10-13 01:49:58] 2025-10-13 05:49:08,754 | INFO     | ..............................
[2025-10-13 01:49:58] 2025-10-13 05:49:08,754 | INFO     | . Timing measurements:
[2025-10-13 01:49:58] 2025-10-13 05:49:08,754 | INFO     | . get job = 0 s
[2025-10-13 01:49:58] 2025-10-13 05:49:08,754 | INFO     | . initial setup = 3 s
[2025-10-13 01:49:58] 2025-10-13 05:49:08,754 | INFO     | . payload setup = 21 s
[2025-10-13 01:49:58] 2025-10-13 05:49:08,754 | INFO     | . stage-in = 0 s
[2025-10-13 01:49:58] 2025-10-13 05:49:08,754 | INFO     | . payload execution = 10890 s
[2025-10-13 01:49:58] 2025-10-13 05:49:08,754 | INFO     | . stage-out = 4 s
[2025-10-13 01:49:58] 2025-10-13 05:49:08,754 | INFO     | . log creation = 0 s
[2025-10-13 01:49:58] 2025-10-13 05:49:08,754 | INFO     | ..............................
[2025-10-13 01:49:58] 2025-10-13 05:49:08,860 | INFO     | 
[2025-10-13 01:49:58] 2025-10-13 05:49:08,861 | INFO     | job summary report
[2025-10-13 01:49:58] 2025-10-13 05:49:08,861 | INFO     | --------------------------------------------------
[2025-10-13 01:49:58] 2025-10-13 05:49:08,861 | INFO     | PanDA job id: 6840750107
[2025-10-13 01:49:58] 2025-10-13 05:49:08,861 | INFO     | task id: 46676269
[2025-10-13 01:49:58] 2025-10-13 05:49:08,861 | INFO     | errors: (none)
[2025-10-13 01:49:58] 2025-10-13 05:49:08,861 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 01:49:58] 2025-10-13 05:49:08,861 | INFO     | pilot state: finished 
[2025-10-13 01:49:58] 2025-10-13 05:49:08,861 | INFO     | transexitcode: 0
[2025-10-13 01:49:58] 2025-10-13 05:49:08,861 | INFO     | exeerrorcode: 0
[2025-10-13 01:49:58] 2025-10-13 05:49:08,861 | INFO     | exeerrordiag: 
[2025-10-13 01:49:58] 2025-10-13 05:49:08,861 | INFO     | exitcode: 0
[2025-10-13 01:49:58] 2025-10-13 05:49:08,861 | INFO     | exitmsg: OK
[2025-10-13 01:49:58] 2025-10-13 05:49:08,861 | INFO     | cpuconsumptiontime: 36936 s
[2025-10-13 01:49:58] 2025-10-13 05:49:08,861 | INFO     | nevents: 400
[2025-10-13 01:49:58] 2025-10-13 05:49:08,861 | INFO     | neventsw: 0
[2025-10-13 01:49:58] 2025-10-13 05:49:08,862 | INFO     | pid: 2152236
[2025-10-13 01:49:58] 2025-10-13 05:49:08,862 | INFO     | pgrp: 2152236
[2025-10-13 01:49:58] 2025-10-13 05:49:08,862 | INFO     | corecount: 8
[2025-10-13 01:49:58] 2025-10-13 05:49:08,862 | INFO     | event service: False
[2025-10-13 01:49:58] 2025-10-13 05:49:08,862 | INFO     | sizes: {0: 2348028, 1: 2348884, 9: 2349146, 12: 2349174, 10916: 2378165, 10918: 2378164, 10924: 2387374, 10926: 2387430, 10935: 2387688}
[2025-10-13 01:49:58] 2025-10-13 05:49:08,862 | INFO     | --------------------------------------------------
[2025-10-13 01:49:58] 2025-10-13 05:49:08,862 | INFO     | 
[2025-10-13 01:49:58] 2025-10-13 05:49:08,862 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-13 01:49:58] 2025-10-13 05:49:08,897 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 01:49:58] 2025-10-13 05:49:08,897 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 01:49:58] 2025-10-13 05:49:08,898 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 01:49:58] 2025-10-13 05:49:08,898 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 01:49:58] 2025-10-13 05:49:08,898 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 01:49:58] 2025-10-13 05:49:08,898 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 01:49:58] 2025-10-13 05:49:08,898 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 01:49:58] 2025-10-13 05:49:08,898 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 01:49:58] 2025-10-13 05:49:08,898 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 01:49:58] 2025-10-13 05:49:08,898 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 01:49:58] 2025-10-13 05:49:08,901 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 01:49:58] 2025-10-13 05:49:08,901 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 01:49:58] 2025-10-13 05:49:08,901 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 01:49:58] 2025-10-13 05:49:08,901 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 01:49:58] 2025-10-13 05:49:08,902 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 01:49:58] 2025-10-13 05:49:08,902 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 01:49:58] 2025-10-13 05:49:08,902 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 01:49:58] 2025-10-13 05:49:08,902 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 01:49:58] 2025-10-13 05:49:08,902 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 01:49:58] 2025-10-13 05:49:08,902 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 01:49:58] 2025-10-13 05:49:08,902 | INFO     | job 6840750107 has completed (purged errors)
[2025-10-13 01:49:58] 2025-10-13 05:49:08,902 | INFO     | overall cleanup function is called
[2025-10-13 01:49:58] 2025-10-13 05:49:09,914 | INFO     | --- collectZombieJob: --- 10, [2152236]
[2025-10-13 01:49:58] 2025-10-13 05:49:09,915 | INFO     | zombie collector waiting for pid 2152236
[2025-10-13 01:49:58] 2025-10-13 05:49:09,915 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 01:49:58] 2025-10-13 05:49:09,915 | INFO     | collected zombie processes
[2025-10-13 01:49:58] 2025-10-13 05:49:09,915 | INFO     | will attempt to kill all subprocesses of pid=2152236
[2025-10-13 01:49:58] 2025-10-13 05:49:10,689 | INFO     | process IDs to be killed: [2152236] (in reverse order)
[2025-10-13 01:49:58] 2025-10-13 05:49:10,858 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 01:49:58] 2025-10-13 05:49:10,859 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 01:49:58] 2025-10-13 05:49:10,937 | INFO     | did not find any defunct processes belonging to 2152236
[2025-10-13 01:49:58] 2025-10-13 05:49:11,015 | INFO     | did not find any defunct processes belonging to 2152236
[2025-10-13 01:49:58] 2025-10-13 05:49:11,015 | INFO     | ready for new job
[2025-10-13 01:49:58] 2025-10-13 05:49:11,016 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 01:49:58] 2025-10-13 05:49:11,031 | INFO     | ***************************************
[2025-10-13 01:49:58] 2025-10-13 05:49:11,032 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 01:49:58] 2025-10-13 05:49:11,032 | INFO     | ***************************************
[2025-10-13 01:49:58] 2025-10-13 05:49:11,032 | INFO     | 
[2025-10-13 01:49:58] 2025-10-13 05:49:11,060 | INFO     | architecture information:
[2025-10-13 01:49:58] 2025-10-13 05:49:11,061 | INFO     | executing command: cat /etc/os-release
[2025-10-13 01:49:58] 2025-10-13 05:49:11,109 | INFO     | cat /etc/os-release:
[2025-10-13 01:49:58] NAME="CentOS Linux"
[2025-10-13 01:49:58] VERSION="7 (Core)"
[2025-10-13 01:49:58] ID="centos"
[2025-10-13 01:49:58] ID_LIKE="rhel fedora"
[2025-10-13 01:49:58] VERSION_ID="7"
[2025-10-13 01:49:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 01:49:58] ANSI_COLOR="0;31"
[2025-10-13 01:49:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 01:49:58] HOME_URL="https://www.centos.org/"
[2025-10-13 01:49:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 01:49:58] 
[2025-10-13 01:49:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 01:49:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 01:49:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 01:49:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 01:49:58] 
[2025-10-13 01:49:58] 2025-10-13 05:49:11,109 | INFO     | ***************************************
[2025-10-13 01:49:58] 2025-10-13 05:49:11,613 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-13 01:49:58] 2025-10-13 05:49:11,670 | INFO     | sufficient remaining disk space (126832607232 B)
[2025-10-13 01:49:58] 2025-10-13 05:49:11,671 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 01:49:58] 2025-10-13 05:49:11,671 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 01:49:58] 2025-10-13 05:49:11,671 | INFO     | update_server=False
[2025-10-13 01:49:58] 2025-10-13 05:49:11,672 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 01:49:58] 2025-10-13 05:49:11,672 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 01:49:58] 2025-10-13 05:49:11,792 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 01:49:58] 2025-10-13 05:49:11,793 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 01:49:58] 2025-10-13 05:49:11,793 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:49:58] 2025-10-13 05:49:11,793 | INFO     | will abort loop
[2025-10-13 01:49:58] 2025-10-13 05:49:12,104 | INFO     | all data control threads have been joined
[2025-10-13 01:49:58] 2025-10-13 05:49:12,301 | INFO     | all job control threads have been joined
[2025-10-13 01:49:58] 2025-10-13 05:49:12,677 | INFO     | [job] retrieve thread has finished
[2025-10-13 01:49:58] 2025-10-13 05:49:12,744 | INFO     | [job] validate thread has finished
[2025-10-13 01:49:58] 2025-10-13 05:49:12,768 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 01:49:58] 2025-10-13 05:49:12,774 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 01:49:58] 2025-10-13 05:49:12,798 | INFO     | [job] job monitor thread has finished
[2025-10-13 01:49:58] 2025-10-13 05:49:12,816 | INFO     | [payload] failed_post thread has finished
[2025-10-13 01:49:58] 2025-10-13 05:49:12,867 | INFO     | [payload] validate_post thread has finished
[2025-10-13 01:49:58] 2025-10-13 05:49:12,934 | INFO     | all payload control threads have been joined
[2025-10-13 01:49:58] 2025-10-13 05:49:13,110 | INFO     | [data] control thread has finished
[2025-10-13 01:49:58] 2025-10-13 05:49:13,294 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 01:49:58] 2025-10-13 05:49:13,295 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 01:49:58] 2025-10-13 05:49:13,307 | INFO     | [job] control thread has finished
[2025-10-13 01:49:58] 2025-10-13 05:49:13,692 | INFO     | [data] copytool_out thread has finished
[2025-10-13 01:49:58] 2025-10-13 05:49:13,768 | INFO     | [data] copytool_in thread has finished
[2025-10-13 01:49:58] 2025-10-13 05:49:13,903 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:49:58] 2025-10-13 05:49:13,940 | INFO     | [payload] control thread has finished
[2025-10-13 01:49:58] 2025-10-13 05:49:14,774 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 01:49:58] 2025-10-13 05:49:14,909 | INFO     | [job] queue monitor thread has finished
[2025-10-13 01:49:58] 2025-10-13 05:49:18,801 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 01:49:58] 2025-10-13 05:49:42,195 | INFO     | PID=2143367 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 01:49:58] 2025-10-13 05:49:42,195 | INFO     | .. there are 26 such processes running
[2025-10-13 01:49:58] 2025-10-13 05:49:42,195 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 01:49:58] 2025-10-13 05:49:42,195 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 01:49:58] 2025-10-13 05:49:42,195 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 01:49:58] 2025-10-13 05:49:51,765 | INFO     | [monitor] cgroup control has ended
[2025-10-13 01:49:58] 2025-10-13 05:49:52,595 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140678309586752)>', '<ExcThread(monitor, started 140677090375424)>']
[2025-10-13 01:49:58] 2025-10-13 05:49:53,260 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 01:49:58] 2025-10-13 05:49:53,261 | INFO     | [monitor] control thread has ended
[2025-10-13 01:49:58] 2025-10-13 05:49:57,622 | INFO     | all workflow threads have been joined
[2025-10-13 01:49:58] 2025-10-13 05:49:57,622 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 01:49:58] 2025-10-13 05:49:57,623 | INFO     | traces error code: 0
[2025-10-13 01:49:58] 2025-10-13 05:49:57,623 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 01:49:58] 2025-10-13 05:49:58,001 [wrapper] ==== pilot stdout END ====
[2025-10-13 01:49:58] 2025-10-13 05:49:58,005 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 01:49:58] 2025-10-13 05:49:58,012 [wrapper] pilotpid: 2143367
[2025-10-13 01:49:58] 2025-10-13 05:49:58,036 [wrapper] Pilot exit status: 0
[2025-10-13 01:49:58] 2025-10-13 05:49:58,084 [wrapper] pandaids: 6840750107
[2025-10-13 01:49:58] 2025-10-13 05:49:58,206 [wrapper] cleanup supervisor_pilot 2700811 2143368
[2025-10-13 01:49:58] 2025-10-13 05:49:58,213 [wrapper] Test setup, not cleaning
[2025-10-13 01:49:58] 2025-10-13 05:49:58,217 [wrapper] apfmon messages muted
[2025-10-13 01:49:58] 2025-10-13 05:49:58,223 [wrapper] ==== wrapper stdout END ====
[2025-10-13 01:49:58] 2025-10-13 05:49:58,227 [wrapper] ==== wrapper stderr END ====
[2025-10-13 01:49:58]  *** Error codes and diagnostics ***
[2025-10-13 01:49:58]     "exeErrorCode": 0,
[2025-10-13 01:49:58]     "exeErrorDiag": "",
[2025-10-13 01:49:58]     "pilotErrorCode": 0,
[2025-10-13 01:49:58]     "pilotErrorDiag": "",
[2025-10-13 01:49:58]  *** Listing of results directory ***
[2025-10-13 01:49:58] total 413280
[2025-10-13 01:49:58] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 16:55 pilot3.tar.gz
[2025-10-13 01:49:58] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 17:07 queuedata.json
[2025-10-13 01:49:58] -rwx------. 1 boincer umatlas     36292 Oct 12 17:07 runpilot2-wrapper.sh
[2025-10-13 01:49:58] -rw-r--r--. 1 boincer umatlas       100 Oct 12 22:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 01:49:58] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 22:45 run_atlas
[2025-10-13 01:49:58] -rw-r--r--. 1 boincer umatlas       105 Oct 12 22:45 job.xml
[2025-10-13 01:49:58] -rw-r--r--. 2 boincer umatlas 223034393 Oct 12 22:45 EVNT.46676267._004769.pool.root.1
[2025-10-13 01:49:58] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 22:45 start_atlas.sh
[2025-10-13 01:49:58] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 22:45 shared
[2025-10-13 01:49:58] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 22:45 input.tar.gz
[2025-10-13 01:49:58] -rw-r--r--. 1 boincer umatlas         0 Oct 12 22:45 boinc_lockfile
[2025-10-13 01:49:58] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 22:46 pandaJob.out
[2025-10-13 01:49:58] -rw-------. 1 boincer umatlas    974373 Oct 12 22:46 agis_schedconf.cvmfs.json
[2025-10-13 01:49:58] drwx------. 5 boincer umatlas      4096 Oct 12 22:46 pilot3
[2025-10-13 01:49:58] -rw-r--r--. 1 boincer umatlas      6947 Oct 13 01:48 init_data.xml
[2025-10-13 01:49:58] -rw-------. 1 boincer umatlas 192597566 Oct 13 01:48 HITS.46676269._089486.pool.root.1
[2025-10-13 01:49:58] -rw-r--r--. 1 boincer umatlas       530 Oct 13 01:48 boinc_task_state.xml
[2025-10-13 01:49:58] -rw-------. 1 boincer umatlas      1046 Oct 13 01:48 memory_monitor_summary.json
[2025-10-13 01:49:58] -rw-------. 1 boincer umatlas        95 Oct 13 01:48 pilot_heartbeat.json
[2025-10-13 01:49:58] -rw-------. 1 boincer umatlas   1560580 Oct 13 01:48 agis_ddmendpoints.agis.ALL.json
[2025-10-13 01:49:58] -rw-------. 1 boincer umatlas    416923 Oct 13 01:48 log.46676269._089486.job.log.tgz.1
[2025-10-13 01:49:58] -rw-------. 1 boincer umatlas      7804 Oct 13 01:49 heartbeat.json
[2025-10-13 01:49:58] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 01:49 boinc_mmap_file
[2025-10-13 01:49:58] -rw-------. 1 boincer umatlas      5011 Oct 13 01:49 pilotlog.txt
[2025-10-13 01:49:58] -rw-r--r--. 1 boincer umatlas        27 Oct 13 01:49 wrapper_checkpoint.txt
[2025-10-13 01:49:58] -rw-------. 1 boincer umatlas   1420723 Oct 13 01:49 log.46676269._089486.job.log.1
[2025-10-13 01:49:58] -rw-------. 1 boincer umatlas       357 Oct 13 01:49 output.list
[2025-10-13 01:49:58] -rw-r--r--. 1 boincer umatlas       620 Oct 13 01:49 runtime_log
[2025-10-13 01:49:58] -rw-------. 1 boincer umatlas   1853440 Oct 13 01:49 result.tar.gz
[2025-10-13 01:49:58] -rw-r--r--. 1 boincer umatlas      8704 Oct 13 01:49 runtime_log.err
[2025-10-13 01:49:58] -rw-------. 1 boincer umatlas       660 Oct 13 01:49 R89KDmrSIS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmq3UMDmmgsCun.diag
[2025-10-13 01:49:58] -rw-r--r--. 1 boincer umatlas     21190 Oct 13 01:49 stderr.txt
[2025-10-13 01:49:58] HITS file was successfully produced:
[2025-10-13 01:49:58] -rw-------. 1 boincer umatlas 192597566 Oct 13 01:48 shared/HITS.pool.root.1
[2025-10-13 01:49:58]  *** Contents of shared directory: ***
[2025-10-13 01:49:58] total 408284
[2025-10-13 01:49:58] -rw-r--r--. 2 boincer umatlas 223034393 Oct 12 22:45 ATLAS.root_0
[2025-10-13 01:49:58] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 22:45 start_atlas.sh
[2025-10-13 01:49:58] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 22:45 input.tar.gz
[2025-10-13 01:49:58] -rw-------. 1 boincer umatlas 192597566 Oct 13 01:48 HITS.pool.root.1
[2025-10-13 01:49:58] -rw-------. 1 boincer umatlas   1853440 Oct 13 01:49 result.tar.gz
01:49:59 (2138159): run_atlas exited; CPU time 37306.565041
01:49:59 (2138159): called boinc_finish(0)

</stderr_txt>
]]>

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