Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
02:20:48 (2500515): wrapper (7.7.26015): starting
02:20:48 (2500515): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 02:20:48] Arguments: --nthreads 12
[2025-10-13 02:20:48] Threads: 12
[2025-10-13 02:20:48] Checking for CVMFS
[2025-10-13 02:20:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 02:20:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 02:20:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 02:20:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 02:20:49] 2.11.0.0 3299214 3894 91436 151645 2 188 5479342 6144001 12858 130560 0 76381906 100.000 141949 178 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-13 02:20:49] CVMFS is ok
[2025-10-13 02:20:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 02:20:49] Checking for apptainer binary...
[2025-10-13 02:20:49] apptainer is not installed, using version from CVMFS
[2025-10-13 02:20:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 02:20:49] radiat0r
[2025-10-13 02:20:49] apptainer works
[2025-10-13 02:20:49] Set ATHENA_PROC_NUMBER=12
[2025-10-13 02:20:49] Set ATHENA_CORE_NUMBER=12
[2025-10-13 02:20:49] Starting ATLAS job with PandaID=6840536168
[2025-10-13 02:20:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:11:13]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:11:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 03:11:13]  replicas=None
[2025-10-13 03:11:13]  scope=mc23_13p6TeV
[2025-10-13 03:11:13]  status=None
[2025-10-13 03:11:13]  status_code=0
[2025-10-13 03:11:13]  storage_token=
[2025-10-13 03:11:13]  surl=/var/lib/boinc/slots/6/PanDA_Pilot-6840536168/log.46676269._086223.job.log.tgz.1
[2025-10-13 03:11:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/99/f3/log.46676269._086223.job.log.tgz.1
[2025-10-13 03:11:13]  workdir=None
[2025-10-13 03:11:13] ]
[2025-10-13 03:11:13] 2025-10-13 03:10:27,788 | INFO     | transferring file log.46676269._086223.job.log.tgz.1 from /var/lib/boinc/slots/6/PanDA_Pilot-6840536168/log.46676269._086223.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-13 03:11:13] 2025-10-13 03:10:27,788 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/6/PanDA_Pilot-6840536168/log.46676269._086223.job.log.tgz.1 /var/lib/boinc/slots/6/log.46676269._086223.job
[2025-10-13 03:11:13] 2025-10-13 03:10:27,814 | INFO     | adding to output.list: log.46676269._086223.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/99/f3/log.46676269._086223.job.log.tg
[2025-10-13 03:11:13] 2025-10-13 03:10:27,815 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 03:11:13] 2025-10-13 03:10:27,816 | INFO     | summary of transferred files:
[2025-10-13 03:11:13] 2025-10-13 03:10:27,816 | INFO     |  -- lfn=log.46676269._086223.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 03:11:13] 2025-10-13 03:10:27,816 | INFO     | stage-out finished correctly
[2025-10-13 03:11:13] 2025-10-13 03:10:27,916 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 03:11:13] 2025-10-13 03:10:28,375 | INFO     | job 6840536168 has state=finished
[2025-10-13 03:11:13] 2025-10-13 03:10:28,375 | INFO     | preparing for final server update for job 6840536168 in state='finished'
[2025-10-13 03:11:13] 2025-10-13 03:10:28,375 | INFO     | this job has now completed (state=finished)
[2025-10-13 03:11:13] 2025-10-13 03:10:28,375 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 03:11:13] 2025-10-13 03:10:28,376 | INFO     | log transfer has been attempted: DONE
[2025-10-13 03:11:13] 2025-10-13 03:10:28,376 | INFO     | job 6840536168 has finished - writing final server update
[2025-10-13 03:11:13] 2025-10-13 03:10:28,376 | INFO     | total number of processed events: 400 (read)
[2025-10-13 03:11:13] 2025-10-13 03:10:28,377 | INFO     | executing command: lscpu
[2025-10-13 03:11:13] 2025-10-13 03:10:28,573 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 03:11:13] 2025-10-13 03:10:29,119 | INFO     | time since job start (2967s) is within the limit (172800.0s)
[2025-10-13 03:11:13] 2025-10-13 03:10:31,123 | INFO     | time since job start (2969s) is within the limit (172800.0s)
[2025-10-13 03:11:13] 2025-10-13 03:10:33,127 | INFO     | time since job start (2971s) is within the limit (172800.0s)
[2025-10-13 03:11:13] 2025-10-13 03:10:34,202 | WARNING  | process 2516112 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 03:11:13] 2025-10-13 03:10:34,202 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6840536168/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 03:11:13] 2025-10-13 03:10:35,034 | INFO     | number of running child processes to parent process 2516112: 1
[2025-10-13 03:11:13] 2025-10-13 03:10:35,034 | INFO     | maximum number of monitored processes: 6
[2025-10-13 03:11:13] 2025-10-13 03:10:35,131 | INFO     | time since job start (2973s) is within the limit (172800.0s)
[2025-10-13 03:11:13] 2025-10-13 03:10:35,221 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 03:11:13] 2025-10-13 03:10:35,266 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2378.7535234375014
[2025-10-13 03:11:13] 2025-10-13 03:10:35,359 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6840536168/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 03:11:13] 2025-10-13 03:10:35,359 | INFO     | extracted standard info from prmon json
[2025-10-13 03:11:13] 2025-10-13 03:10:35,359 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 03:11:13] 2025-10-13 03:10:35,360 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 03:11:13] 2025-10-13 03:10:35,360 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 03:11:13] 2025-10-13 03:10:35,360 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 03:11:13] 2025-10-13 03:10:35,361 | INFO     | fitting pss+swap vs Time
[2025-10-13 03:11:13] 2025-10-13 03:10:35,361 | INFO     | sum of square deviations: 22960430.5
[2025-10-13 03:11:13] 2025-10-13 03:10:35,362 | INFO     | sum of deviations: 52163662.0
[2025-10-13 03:11:13] 2025-10-13 03:10:35,362 | INFO     | mean x: 1760323649.5
[2025-10-13 03:11:13] 2025-10-13 03:10:35,362 | INFO     | mean y: 2686203.523809524
[2025-10-13 03:11:13] 2025-10-13 03:10:35,362 | INFO     | -- intersect: -3996582358.2361484
[2025-10-13 03:11:13] 2025-10-13 03:10:35,362 | INFO     | intersect: -3996582358.2361484
[2025-10-13 03:11:13] 2025-10-13 03:10:35,362 | INFO     | chi2: 0.0008609227749189185
[2025-10-13 03:11:13] 2025-10-13 03:10:35,363 | INFO     | -- intersect: -3996582358.2361484
[2025-10-13 03:11:13] 2025-10-13 03:10:35,363 | INFO     | current memory leak: 2.27 B/s (using 42 data points, chi2=0.00)
[2025-10-13 03:11:13] 2025-10-13 03:10:35,363 | INFO     | could have reported an average CPU frequency of 2348 MHz (5 samples)
[2025-10-13 03:11:13] 2025-10-13 03:10:35,363 | INFO     | ..............................
[2025-10-13 03:11:13] 2025-10-13 03:10:35,363 | INFO     | . Timing measurements:
[2025-10-13 03:11:13] 2025-10-13 03:10:35,363 | INFO     | . get job = 0 s
[2025-10-13 03:11:13] 2025-10-13 03:10:35,363 | INFO     | . initial setup = 1 s
[2025-10-13 03:11:13] 2025-10-13 03:10:35,363 | INFO     | . payload setup = 7 s
[2025-10-13 03:11:13] 2025-10-13 03:10:35,363 | INFO     | . stage-in = 0 s
[2025-10-13 03:11:13] 2025-10-13 03:10:35,364 | INFO     | . payload execution = 2935 s
[2025-10-13 03:11:13] 2025-10-13 03:10:35,364 | INFO     | . stage-out = 0 s
[2025-10-13 03:11:13] 2025-10-13 03:10:35,364 | INFO     | . log creation = 0 s
[2025-10-13 03:11:13] 2025-10-13 03:10:35,364 | INFO     | ..............................
[2025-10-13 03:11:13] 2025-10-13 03:10:35,864 | INFO     | 
[2025-10-13 03:11:13] 2025-10-13 03:10:35,865 | INFO     | job summary report
[2025-10-13 03:11:13] 2025-10-13 03:10:35,865 | INFO     | --------------------------------------------------
[2025-10-13 03:11:13] 2025-10-13 03:10:35,865 | INFO     | PanDA job id: 6840536168
[2025-10-13 03:11:13] 2025-10-13 03:10:35,865 | INFO     | task id: 46676269
[2025-10-13 03:11:13] 2025-10-13 03:10:35,865 | INFO     | errors: (none)
[2025-10-13 03:11:13] 2025-10-13 03:10:35,865 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 03:11:13] 2025-10-13 03:10:35,865 | INFO     | pilot state: finished 
[2025-10-13 03:11:13] 2025-10-13 03:10:35,865 | INFO     | transexitcode: 0
[2025-10-13 03:11:13] 2025-10-13 03:10:35,865 | INFO     | exeerrorcode: 0
[2025-10-13 03:11:13] 2025-10-13 03:10:35,866 | INFO     | exeerrordiag: 
[2025-10-13 03:11:13] 2025-10-13 03:10:35,866 | INFO     | exitcode: 0
[2025-10-13 03:11:13] 2025-10-13 03:10:35,866 | INFO     | exitmsg: OK
[2025-10-13 03:11:13] 2025-10-13 03:10:35,866 | INFO     | cpuconsumptiontime: 31202 s
[2025-10-13 03:11:13] 2025-10-13 03:10:35,866 | INFO     | nevents: 400
[2025-10-13 03:11:13] 2025-10-13 03:10:35,866 | INFO     | neventsw: 0
[2025-10-13 03:11:13] 2025-10-13 03:10:35,866 | INFO     | pid: 2516112
[2025-10-13 03:11:13] 2025-10-13 03:10:35,866 | INFO     | pgrp: 2516112
[2025-10-13 03:11:13] 2025-10-13 03:10:35,866 | INFO     | corecount: 12
[2025-10-13 03:11:13] 2025-10-13 03:10:35,866 | INFO     | event service: False
[2025-10-13 03:11:13] 2025-10-13 03:10:35,866 | INFO     | sizes: {0: 2348680, 1: 2348879, 7: 2349141, 11: 2349169, 2946: 2374696, 2947: 2383878, 2955: 2384048}
[2025-10-13 03:11:13] 2025-10-13 03:10:35,867 | INFO     | --------------------------------------------------
[2025-10-13 03:11:13] 2025-10-13 03:10:35,867 | INFO     | 
[2025-10-13 03:11:13] 2025-10-13 03:10:35,867 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-10-13 03:11:13] 2025-10-13 03:10:35,895 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 03:11:13] 2025-10-13 03:10:35,896 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 03:11:13] 2025-10-13 03:10:35,896 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 03:11:13] 2025-10-13 03:10:35,896 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 03:11:13] 2025-10-13 03:10:35,896 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 03:11:13] 2025-10-13 03:10:35,897 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 03:11:13] 2025-10-13 03:10:35,897 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 03:11:13] 2025-10-13 03:10:35,897 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 03:11:13] 2025-10-13 03:10:35,897 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 03:11:13] 2025-10-13 03:10:35,897 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 03:11:13] 2025-10-13 03:10:35,897 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 03:11:13] 2025-10-13 03:10:35,897 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 03:11:13] 2025-10-13 03:10:35,897 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 03:11:13] 2025-10-13 03:10:35,897 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 03:11:13] 2025-10-13 03:10:35,897 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 03:11:13] 2025-10-13 03:10:35,898 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 03:11:13] 2025-10-13 03:10:35,898 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 03:11:13] 2025-10-13 03:10:35,898 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 03:11:13] 2025-10-13 03:10:35,898 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 03:11:13] 2025-10-13 03:10:35,898 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 03:11:13] 2025-10-13 03:10:35,898 | INFO     | job 6840536168 has completed (purged errors)
[2025-10-13 03:11:13] 2025-10-13 03:10:35,898 | INFO     | overall cleanup function is called
[2025-10-13 03:11:13] 2025-10-13 03:10:36,908 | INFO     | --- collectZombieJob: --- 10, [2516112]
[2025-10-13 03:11:13] 2025-10-13 03:10:36,908 | INFO     | zombie collector waiting for pid 2516112
[2025-10-13 03:11:13] 2025-10-13 03:10:36,909 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 03:11:13] 2025-10-13 03:10:36,909 | INFO     | collected zombie processes
[2025-10-13 03:11:13] 2025-10-13 03:10:36,909 | INFO     | will attempt to kill all subprocesses of pid=2516112
[2025-10-13 03:11:13] 2025-10-13 03:10:37,772 | INFO     | process IDs to be killed: [2516112] (in reverse order)
[2025-10-13 03:11:13] 2025-10-13 03:10:38,043 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 03:11:13] 2025-10-13 03:10:38,044 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 03:11:13] 2025-10-13 03:10:38,074 | INFO     | did not find any defunct processes belonging to 2516112
[2025-10-13 03:11:13] 2025-10-13 03:10:38,102 | INFO     | did not find any defunct processes belonging to 2516112
[2025-10-13 03:11:13] 2025-10-13 03:10:38,102 | INFO     | ready for new job
[2025-10-13 03:11:13] 2025-10-13 03:10:38,102 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 03:11:13] 2025-10-13 03:10:38,105 | INFO     | ***************************************
[2025-10-13 03:11:13] 2025-10-13 03:10:38,105 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 03:11:13] 2025-10-13 03:10:38,105 | INFO     | ***************************************
[2025-10-13 03:11:13] 2025-10-13 03:10:38,105 | INFO     | 
[2025-10-13 03:11:13] 2025-10-13 03:10:38,141 | INFO     | architecture information:
[2025-10-13 03:11:13] 2025-10-13 03:10:38,141 | INFO     | executing command: cat /etc/os-release
[2025-10-13 03:11:13] 2025-10-13 03:10:38,164 | INFO     | cat /etc/os-release:
[2025-10-13 03:11:13] NAME="CentOS Linux"
[2025-10-13 03:11:13] VERSION="7 (Core)"
[2025-10-13 03:11:13] ID="centos"
[2025-10-13 03:11:13] ID_LIKE="rhel fedora"
[2025-10-13 03:11:13] VERSION_ID="7"
[2025-10-13 03:11:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 03:11:13] ANSI_COLOR="0;31"
[2025-10-13 03:11:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 03:11:13] HOME_URL="https://www.centos.org/"
[2025-10-13 03:11:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 03:11:13] 
[2025-10-13 03:11:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 03:11:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 03:11:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 03:11:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 03:11:13] 
[2025-10-13 03:11:13] 2025-10-13 03:10:38,165 | INFO     | ***************************************
[2025-10-13 03:11:13] 2025-10-13 03:10:38,667 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-10-13 03:11:13] 2025-10-13 03:10:38,693 | INFO     | sufficient remaining disk space (1724089630720 B)
[2025-10-13 03:11:13] 2025-10-13 03:10:38,693 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 03:11:13] 2025-10-13 03:10:38,693 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 03:11:13] 2025-10-13 03:10:38,694 | INFO     | update_server=False
[2025-10-13 03:11:13] 2025-10-13 03:10:38,694 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 03:11:13] 2025-10-13 03:10:38,694 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 03:11:13] 2025-10-13 03:10:38,694 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:11:13] 2025-10-13 03:10:38,695 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:11:13] 2025-10-13 03:10:38,695 | INFO     | aborting loop
[2025-10-13 03:11:13] 2025-10-13 03:10:38,829 | INFO     | all job control threads have been joined
[2025-10-13 03:11:13] 2025-10-13 03:10:39,198 | INFO     | all data control threads have been joined
[2025-10-13 03:11:13] 2025-10-13 03:10:39,632 | INFO     | all payload control threads have been joined
[2025-10-13 03:11:13] 2025-10-13 03:10:39,698 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:11:13] 2025-10-13 03:10:39,699 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:11:13] 2025-10-13 03:10:39,835 | INFO     | [job] control thread has finished
[2025-10-13 03:11:13] 2025-10-13 03:10:39,866 | INFO     | [job] validate thread has finished
[2025-10-13 03:11:13] 2025-10-13 03:10:39,906 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:11:13] 2025-10-13 03:10:40,180 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:11:13] 2025-10-13 03:10:40,202 | INFO     | [data] control thread has finished
[2025-10-13 03:11:13] 2025-10-13 03:10:40,302 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:11:13] 2025-10-13 03:10:40,466 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:11:13] 2025-10-13 03:10:40,535 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:11:13] 2025-10-13 03:10:40,638 | INFO     | [payload] control thread has finished
[2025-10-13 03:11:13] 2025-10-13 03:10:40,698 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:11:13] 2025-10-13 03:10:40,806 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:11:13] 2025-10-13 03:10:41,271 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:11:13] 2025-10-13 03:10:41,470 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:11:13] 2025-10-13 03:10:42,698 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:11:13] 2025-10-13 03:10:49,175 | INFO     | job.realtimelogging is not enabled
[2025-10-13 03:11:13] 2025-10-13 03:10:50,181 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:11:13] 2025-10-13 03:11:07,050 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:11:13] 2025-10-13 03:11:08,026 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139731489134400)>', '<ExcThread(monitor, started 139730914109184)>']
[2025-10-13 03:11:13] 2025-10-13 03:11:09,214 | INFO     | PID=2505242 has CPU usage=12.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 03:11:13] 2025-10-13 03:11:09,214 | INFO     | .. there are 17 such processes running
[2025-10-13 03:11:13] 2025-10-13 03:11:09,215 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:11:13] 2025-10-13 03:11:09,215 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:11:13] 2025-10-13 03:11:09,215 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:11:13] 2025-10-13 03:11:09,215 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:11:13] 2025-10-13 03:11:09,215 | INFO     | [monitor] control thread has ended
[2025-10-13 03:11:13] 2025-10-13 03:11:13,050 | INFO     | all workflow threads have been joined
[2025-10-13 03:11:13] 2025-10-13 03:11:13,051 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:11:13] 2025-10-13 03:11:13,051 | INFO     | traces error code: 0
[2025-10-13 03:11:13] 2025-10-13 03:11:13,051 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:11:13] 2025-10-13 03:11:13,207 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:11:13] 2025-10-13 03:11:13,211 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:11:13] 2025-10-13 03:11:13,214 [wrapper] pilotpid: 2505242
[2025-10-13 03:11:13] 2025-10-13 03:11:13,218 [wrapper] Pilot exit status: 0
[2025-10-13 03:11:13] 2025-10-13 03:11:13,233 [wrapper] pandaids: 6840536168
[2025-10-13 03:11:13] 2025-10-13 03:11:13,413 [wrapper] cleanup supervisor_pilot 2911082 2505243
[2025-10-13 03:11:13] 2025-10-13 03:11:13,417 [wrapper] Test setup, not cleaning
[2025-10-13 03:11:13] 2025-10-13 03:11:13,420 [wrapper] apfmon messages muted
[2025-10-13 03:11:13] 2025-10-13 03:11:13,423 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:11:13] 2025-10-13 03:11:13,425 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:11:13]  *** Error codes and diagnostics ***
[2025-10-13 03:11:13]     "exeErrorCode": 0,
[2025-10-13 03:11:13]     "exeErrorDiag": "",
[2025-10-13 03:11:13]     "pilotErrorCode": 0,
[2025-10-13 03:11:13]     "pilotErrorDiag": "",
[2025-10-13 03:11:13]  *** Listing of results directory ***
[2025-10-13 03:11:13] total 406376
[2025-10-13 03:11:13] -rw-r--r-- 1 boinc boinc    557409 Oct 12 18:20 pilot3.tar.gz
[2025-10-13 03:11:13] -rw-r--r-- 1 boinc boinc      5112 Oct 12 18:29 queuedata.json
[2025-10-13 03:11:13] -rwx------ 1 boinc boinc     36292 Oct 12 18:29 runpilot2-wrapper.sh
[2025-10-13 03:11:13] -rw-r--r-- 1 boinc boinc       100 Oct 13 02:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:11:13] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 02:20 run_atlas
[2025-10-13 03:11:13] -rw-r--r-- 1 boinc boinc       105 Oct 13 02:20 job.xml
[2025-10-13 03:11:13] -rw-r--r-- 2 boinc boinc     15120 Oct 13 02:20 start_atlas.sh
[2025-10-13 03:11:13] drwxrwx--x 2 boinc boinc      4096 Oct 13 02:20 shared
[2025-10-13 03:11:13] -rw-r--r-- 2 boinc boinc    569679 Oct 13 02:20 input.tar.gz
[2025-10-13 03:11:13] -rw-r--r-- 1 boinc boinc      9395 Oct 13 02:20 init_data.xml
[2025-10-13 03:11:13] -rw-r--r-- 2 boinc boinc 220480484 Oct 13 02:20 EVNT.46676267._004409.pool.root.1
[2025-10-13 03:11:13] -rw-r--r-- 1 boinc boinc         0 Oct 13 02:20 boinc_setup_complete
[2025-10-13 03:11:13] -rw-r--r-- 1 boinc boinc         0 Oct 13 02:20 boinc_lockfile
[2025-10-13 03:11:13] -rw-r--r-- 1 boinc boinc      2547 Oct 13 02:20 pandaJob.out
[2025-10-13 03:11:13] -rw------- 1 boinc boinc    974373 Oct 13 02:21 agis_schedconf.cvmfs.json
[2025-10-13 03:11:13] -rw------- 1 boinc boinc   1560580 Oct 13 02:21 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:11:13] drwx------ 5 boinc boinc      4096 Oct 13 02:21 pilot3
[2025-10-13 03:11:13] -rw------- 1 boinc boinc 190157988 Oct 13 03:09 HITS.46676269._086223.pool.root.1
[2025-10-13 03:11:13] -rw-r--r-- 1 boinc boinc       529 Oct 13 03:09 boinc_task_state.xml
[2025-10-13 03:11:13] -rw------- 1 boinc boinc      1024 Oct 13 03:10 memory_monitor_summary.json
[2025-10-13 03:11:13] -rw------- 1 boinc boinc    345794 Oct 13 03:10 log.46676269._086223.job.log.tgz.1
[2025-10-13 03:11:13] -rw------- 1 boinc boinc      7732 Oct 13 03:10 heartbeat.json
[2025-10-13 03:11:13] -rw-r--r-- 1 boinc boinc        27 Oct 13 03:11 wrapper_checkpoint.txt
[2025-10-13 03:11:13] -rw------- 1 boinc boinc        95 Oct 13 03:11 pilot_heartbeat.json
[2025-10-13 03:11:13] -rw------- 1 boinc boinc      4899 Oct 13 03:11 pilotlog.txt
[2025-10-13 03:11:13] -rw------- 1 boinc boinc    443842 Oct 13 03:11 log.46676269._086223.job.log.1
[2025-10-13 03:11:13] -rw------- 1 boinc boinc       357 Oct 13 03:11 output.list
[2025-10-13 03:11:13] -rw-r--r-- 1 boinc boinc       620 Oct 13 03:11 runtime_log
[2025-10-13 03:11:13] -rw------- 1 boinc boinc    808960 Oct 13 03:11 result.tar.gz
[2025-10-13 03:11:13] -rw-r--r-- 1 boinc boinc      8658 Oct 13 03:11 runtime_log.err
[2025-10-13 03:11:13] -rw------- 1 boinc boinc       642 Oct 13 03:11 DN7KDmT0FS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmi4kNDmzNQNYo.diag
[2025-10-13 03:11:13] -rw-r--r-- 1 boinc boinc      8192 Oct 13 03:11 boinc_mmap_file
[2025-10-13 03:11:13] -rw-r--r-- 1 boinc boinc     21550 Oct 13 03:11 stderr.txt
[2025-10-13 03:11:13] HITS file was successfully produced:
[2025-10-13 03:11:13] -rw------- 1 boinc boinc 190157988 Oct 13 03:09 shared/HITS.pool.root.1
[2025-10-13 03:11:13]  *** Contents of shared directory: ***
[2025-10-13 03:11:13] total 402396
[2025-10-13 03:11:13] -rw-r--r-- 2 boinc boinc     15120 Oct 13 02:20 start_atlas.sh
[2025-10-13 03:11:13] -rw-r--r-- 2 boinc boinc    569679 Oct 13 02:20 input.tar.gz
[2025-10-13 03:11:13] -rw-r--r-- 2 boinc boinc 220480484 Oct 13 02:20 ATLAS.root_0
[2025-10-13 03:11:13] -rw------- 1 boinc boinc 190157988 Oct 13 03:09 HITS.pool.root.1
[2025-10-13 03:11:13] -rw------- 1 boinc boinc    808960 Oct 13 03:11 result.tar.gz
03:11:14 (2500515): run_atlas exited; CPU time 31378.555739
03:11:14 (2500515): called boinc_finish(0)

</stderr_txt>
]]>

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