Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:03:36 (23201): wrapper (7.7.26015): starting
21:03:36 (23201): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 21:03:36] Arguments: --nthreads 12
[2025-10-12 21:03:36] Threads: 12
[2025-10-12 21:03:36] Checking for CVMFS
[2025-10-12 21:03:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 21:03:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 21:03:36] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 21:03:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 21:03:36] 2.11.2.0 2979 223637 104508 151642 2 59 16127776 20275201 1 130560 2 109385725 99.984 13066366 12024 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 21:03:36] CVMFS is ok
[2025-10-12 21:03:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 21:03:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 21:03:36] Further information can be found at the LHC@home message board.
[2025-10-12 21:03:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:03:36] Checking for apptainer binary...
[2025-10-12 21:03:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 21:03:36] Running /usr/bin/apptainer --version
[2025-10-12 21:03:36] apptainer version 1.3.2-1.el7
[2025-10-12 21:03:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:03:38] c-205-7.aglt2.org
[2025-10-12 21:03:38] apptainer works
[2025-10-12 21:03:38] Set ATHENA_PROC_NUMBER=12
[2025-10-12 21:03:38] Set ATHENA_CORE_NUMBER=12
[2025-10-12 21:03:38] Starting ATLAS job with PandaID=6840749806
[2025-10-12 21:03:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:18:06]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:18:06]  workdir=None
[2025-10-12 22:18:06] ]
[2025-10-12 22:18:06] 2025-10-13 02:17:24,528 | INFO     | transferring file log.46676269._089234.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840749806/log.46676269._089234.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 22:18:06] 2025-10-13 02:17:24,528 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840749806/log.46676269._089234.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._089234.job
[2025-10-12 22:18:06] 2025-10-13 02:17:24,551 | INFO     | adding to output.list: log.46676269._089234.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c6/6c/log.46676269._089234.job.log.tg
[2025-10-12 22:18:06] 2025-10-13 02:17:24,552 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 22:18:06] 2025-10-13 02:17:24,552 | INFO     | summary of transferred files:
[2025-10-12 22:18:06] 2025-10-13 02:17:24,552 | INFO     |  -- lfn=log.46676269._089234.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 22:18:06] 2025-10-13 02:17:24,553 | INFO     | stage-out finished correctly
[2025-10-12 22:18:06] 2025-10-13 02:17:25,416 | WARNING  | process 834 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 22:18:06] 2025-10-13 02:17:25,416 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840749806/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 22:18:06] 2025-10-13 02:17:25,504 | INFO     | number of running child processes to parent process 834: 1
[2025-10-12 22:18:06] 2025-10-13 02:17:25,504 | INFO     | maximum number of monitored processes: 6
[2025-10-12 22:18:06] 2025-10-13 02:17:26,168 | INFO     | time since job start (4413s) is within the limit (172800.0s)
[2025-10-12 22:18:06] 2025-10-13 02:17:26,275 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 22:18:06] 2025-10-13 02:17:27,789 | INFO     | job 6840749806 has state=finished
[2025-10-12 22:18:06] 2025-10-13 02:17:27,789 | INFO     | preparing for final server update for job 6840749806 in state='finished'
[2025-10-12 22:18:06] 2025-10-13 02:17:27,790 | INFO     | this job has now completed (state=finished)
[2025-10-12 22:18:06] 2025-10-13 02:17:27,790 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 22:18:06] 2025-10-13 02:17:27,790 | INFO     | log transfer has been attempted: DONE
[2025-10-12 22:18:06] 2025-10-13 02:17:27,790 | INFO     | job 6840749806 has finished - writing final server update
[2025-10-12 22:18:06] 2025-10-13 02:17:27,791 | INFO     | total number of processed events: 400 (read)
[2025-10-12 22:18:06] 2025-10-13 02:17:27,792 | INFO     | executing command: lscpu
[2025-10-12 22:18:06] 2025-10-13 02:17:27,818 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 22:18:06] 2025-10-13 02:17:28,007 | INFO     | monitor loop #328: job 0:6840749806 is in state 'finished'
[2025-10-12 22:18:06] 2025-10-13 02:17:28,007 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:18:06] 2025-10-13 02:17:28,174 | INFO     | time since job start (4415s) is within the limit (172800.0s)
[2025-10-12 22:18:06] 2025-10-13 02:17:30,179 | INFO     | time since job start (4417s) is within the limit (172800.0s)
[2025-10-12 22:18:06] 2025-10-13 02:17:30,510 | INFO     | monitor loop #329: job 0:6840749806 is in state 'finished'
[2025-10-12 22:18:06] 2025-10-13 02:17:30,510 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:18:06] 2025-10-13 02:17:31,300 | INFO     | PID=26893 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 22:18:06] 2025-10-13 02:17:32,300 | INFO     | time since job start (4419s) is within the limit (172800.0s)
[2025-10-12 22:18:06] 2025-10-13 02:17:33,013 | INFO     | monitor loop #330: job 0:6840749806 is in state 'finished'
[2025-10-12 22:18:06] 2025-10-13 02:17:33,013 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:18:06] 2025-10-13 02:17:33,224 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 22:18:06] 2025-10-13 02:17:33,227 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-10-12 22:18:06] 2025-10-13 02:17:33,229 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840749806/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 22:18:06] 2025-10-13 02:17:33,230 | INFO     | extracted standard info from prmon json
[2025-10-12 22:18:06] 2025-10-13 02:17:33,230 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 22:18:06] 2025-10-13 02:17:33,230 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 22:18:06] 2025-10-13 02:17:33,230 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 22:18:06] 2025-10-13 02:17:33,231 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:18:06] 2025-10-13 02:17:33,232 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:18:06] 2025-10-13 02:17:33,233 | INFO     | sum of square deviations: 85136480.0
[2025-10-12 22:18:06] 2025-10-13 02:17:33,233 | INFO     | sum of deviations: -3366298542.0000005
[2025-10-12 22:18:06] 2025-10-13 02:17:33,233 | INFO     | mean x: 1760319719.0
[2025-10-12 22:18:06] 2025-10-13 02:17:33,233 | INFO     | mean y: 2720054.076923077
[2025-10-12 22:18:06] 2025-10-13 02:17:33,233 | INFO     | -- intersect: 69605805635.2937
[2025-10-12 22:18:06] 2025-10-13 02:17:33,234 | INFO     | intersect: 69605805635.2937
[2025-10-12 22:18:06] 2025-10-13 02:17:33,234 | INFO     | chi2: 0.04646549231412534
[2025-10-12 22:18:06] 2025-10-13 02:17:33,234 | INFO     | -- intersect: 69605805635.2937
[2025-10-12 22:18:06] 2025-10-13 02:17:33,234 | INFO     | current memory leak: -39.54 B/s (using 65 data points, chi2=0.05)
[2025-10-12 22:18:06] 2025-10-13 02:17:33,235 | INFO     | could have reported an average CPU frequency of 2032 MHz (6 samples)
[2025-10-12 22:18:06] 2025-10-13 02:17:33,235 | INFO     | ..............................
[2025-10-12 22:18:06] 2025-10-13 02:17:33,235 | INFO     | . Timing measurements:
[2025-10-12 22:18:06] 2025-10-13 02:17:33,235 | INFO     | . get job = 0 s
[2025-10-12 22:18:06] 2025-10-13 02:17:33,235 | INFO     | . initial setup = 2 s
[2025-10-12 22:18:06] 2025-10-13 02:17:33,235 | INFO     | . payload setup = 7 s
[2025-10-12 22:18:06] 2025-10-13 02:17:33,235 | INFO     | . stage-in = 0 s
[2025-10-12 22:18:06] 2025-10-13 02:17:33,236 | INFO     | . payload execution = 4383 s
[2025-10-12 22:18:06] 2025-10-13 02:17:33,236 | INFO     | . stage-out = 0 s
[2025-10-12 22:18:06] 2025-10-13 02:17:33,236 | INFO     | . log creation = 0 s
[2025-10-12 22:18:06] 2025-10-13 02:17:33,236 | INFO     | ..............................
[2025-10-12 22:18:06] 2025-10-13 02:17:33,317 | INFO     | 
[2025-10-12 22:18:06] 2025-10-13 02:17:33,317 | INFO     | job summary report
[2025-10-12 22:18:06] 2025-10-13 02:17:33,318 | INFO     | --------------------------------------------------
[2025-10-12 22:18:06] 2025-10-13 02:17:33,318 | INFO     | PanDA job id: 6840749806
[2025-10-12 22:18:06] 2025-10-13 02:17:33,318 | INFO     | task id: 46676269
[2025-10-12 22:18:06] 2025-10-13 02:17:33,318 | INFO     | errors: (none)
[2025-10-12 22:18:06] 2025-10-13 02:17:33,318 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:18:06] 2025-10-13 02:17:33,318 | INFO     | pilot state: finished 
[2025-10-12 22:18:06] 2025-10-13 02:17:33,319 | INFO     | transexitcode: 0
[2025-10-12 22:18:06] 2025-10-13 02:17:33,319 | INFO     | exeerrorcode: 0
[2025-10-12 22:18:06] 2025-10-13 02:17:33,319 | INFO     | exeerrordiag: 
[2025-10-12 22:18:06] 2025-10-13 02:17:33,319 | INFO     | exitcode: 0
[2025-10-12 22:18:06] 2025-10-13 02:17:33,319 | INFO     | exitmsg: OK
[2025-10-12 22:18:06] 2025-10-13 02:17:33,319 | INFO     | cpuconsumptiontime: 47803 s
[2025-10-12 22:18:06] 2025-10-13 02:17:33,319 | INFO     | nevents: 400
[2025-10-12 22:18:06] 2025-10-13 02:17:33,320 | INFO     | neventsw: 0
[2025-10-12 22:18:06] 2025-10-13 02:17:33,320 | INFO     | pid: 834
[2025-10-12 22:18:06] 2025-10-13 02:17:33,320 | INFO     | pgrp: 834
[2025-10-12 22:18:06] 2025-10-13 02:17:33,320 | INFO     | corecount: 12
[2025-10-12 22:18:06] 2025-10-13 02:17:33,320 | INFO     | event service: False
[2025-10-12 22:18:06] 2025-10-13 02:17:33,320 | INFO     | sizes: {0: 2348630, 1: 2348885, 6: 2349147, 12: 2349175, 4394: 2375249, 4396: 2384247, 4397: 2384431, 4404: 2384625}
[2025-10-12 22:18:06] 2025-10-13 02:17:33,321 | INFO     | --------------------------------------------------
[2025-10-12 22:18:06] 2025-10-13 02:17:33,321 | INFO     | 
[2025-10-12 22:18:06] 2025-10-13 02:17:33,321 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 22:18:06] 2025-10-13 02:17:33,347 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:18:06] 2025-10-13 02:17:33,347 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:18:06] 2025-10-13 02:17:33,347 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:18:06] 2025-10-13 02:17:33,347 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:18:06] 2025-10-13 02:17:33,348 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:18:06] 2025-10-13 02:17:33,348 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:18:06] 2025-10-13 02:17:33,348 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:18:06] 2025-10-13 02:17:33,348 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:18:06] 2025-10-13 02:17:33,348 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:18:06] 2025-10-13 02:17:33,349 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:18:06] 2025-10-13 02:17:33,349 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:18:06] 2025-10-13 02:17:33,349 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:18:06] 2025-10-13 02:17:33,349 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:18:06] 2025-10-13 02:17:33,349 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:18:06] 2025-10-13 02:17:33,349 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:18:06] 2025-10-13 02:17:33,350 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:18:06] 2025-10-13 02:17:33,350 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:18:06] 2025-10-13 02:17:33,350 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:18:06] 2025-10-13 02:17:33,350 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:18:06] 2025-10-13 02:17:33,350 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:18:06] 2025-10-13 02:17:33,350 | INFO     | job 6840749806 has completed (purged errors)
[2025-10-12 22:18:06] 2025-10-13 02:17:33,351 | INFO     | overall cleanup function is called
[2025-10-12 22:18:06] 2025-10-13 02:17:34,359 | INFO     | --- collectZombieJob: --- 10, [834]
[2025-10-12 22:18:06] 2025-10-13 02:17:34,359 | INFO     | zombie collector waiting for pid 834
[2025-10-12 22:18:06] 2025-10-13 02:17:34,359 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:18:06] 2025-10-13 02:17:34,360 | INFO     | collected zombie processes
[2025-10-12 22:18:06] 2025-10-13 02:17:34,360 | INFO     | will attempt to kill all subprocesses of pid=834
[2025-10-12 22:18:06] 2025-10-13 02:17:34,449 | INFO     | process IDs to be killed: [834] (in reverse order)
[2025-10-12 22:18:06] 2025-10-13 02:17:34,500 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:18:06] 2025-10-13 02:17:34,501 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:18:06] 2025-10-13 02:17:34,504 | INFO     | did not find any defunct processes belonging to 834
[2025-10-12 22:18:06] 2025-10-13 02:17:34,507 | INFO     | did not find any defunct processes belonging to 834
[2025-10-12 22:18:06] 2025-10-13 02:17:34,508 | INFO     | ready for new job
[2025-10-12 22:18:06] 2025-10-13 02:17:34,508 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:18:06] 2025-10-13 02:17:34,509 | INFO     | ***************************************
[2025-10-12 22:18:06] 2025-10-13 02:17:34,509 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:18:06] 2025-10-13 02:17:34,509 | INFO     | ***************************************
[2025-10-12 22:18:06] 2025-10-13 02:17:34,509 | INFO     | 
[2025-10-12 22:18:06] 2025-10-13 02:17:34,510 | INFO     | architecture information:
[2025-10-12 22:18:06] 2025-10-13 02:17:34,510 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:18:06] 2025-10-13 02:17:34,526 | INFO     | cat /etc/os-release:
[2025-10-12 22:18:06] NAME="CentOS Linux"
[2025-10-12 22:18:06] VERSION="7 (Core)"
[2025-10-12 22:18:06] ID="centos"
[2025-10-12 22:18:06] ID_LIKE="rhel fedora"
[2025-10-12 22:18:06] VERSION_ID="7"
[2025-10-12 22:18:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:18:06] ANSI_COLOR="0;31"
[2025-10-12 22:18:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:18:06] HOME_URL="https://www.centos.org/"
[2025-10-12 22:18:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:18:06] 
[2025-10-12 22:18:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:18:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:18:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:18:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:18:06] 
[2025-10-12 22:18:06] 2025-10-13 02:17:34,526 | INFO     | ***************************************
[2025-10-12 22:18:06] 2025-10-13 02:17:35,029 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 22:18:06] 2025-10-13 02:17:35,046 | INFO     | sufficient remaining disk space (29352787968 B)
[2025-10-12 22:18:06] 2025-10-13 02:17:35,047 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:18:06] 2025-10-13 02:17:35,047 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:18:06] 2025-10-13 02:17:35,047 | INFO     | update_server=False
[2025-10-12 22:18:06] 2025-10-13 02:17:35,047 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:18:06] 2025-10-13 02:17:35,048 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:18:06] 2025-10-13 02:17:35,153 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:18:06] 2025-10-13 02:17:35,157 | INFO     | all job control threads have been joined
[2025-10-12 22:18:06] 2025-10-13 02:17:35,278 | INFO     | all data control threads have been joined
[2025-10-12 22:18:06] 2025-10-13 02:17:35,326 | INFO     | all payload control threads have been joined
[2025-10-12 22:18:06] 2025-10-13 02:17:35,516 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 22:18:06] 2025-10-13 02:17:35,517 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 22:18:06] 2025-10-13 02:17:35,517 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:18:06] 2025-10-13 02:17:35,517 | INFO     | will abort loop
[2025-10-12 22:18:06] 2025-10-13 02:17:36,053 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:18:06] 2025-10-13 02:17:36,053 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:18:06] 2025-10-13 02:17:36,161 | INFO     | [job] control thread has finished
[2025-10-12 22:18:06] 2025-10-13 02:17:36,167 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:18:06] 2025-10-13 02:17:36,246 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:18:06] 2025-10-13 02:17:36,283 | INFO     | [data] control thread has finished
[2025-10-12 22:18:06] 2025-10-13 02:17:36,331 | INFO     | [payload] control thread has finished
[2025-10-12 22:18:06] 2025-10-13 02:17:36,521 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:18:06] 2025-10-13 02:17:36,688 | INFO     | [job] validate thread has finished
[2025-10-12 22:18:06] 2025-10-13 02:17:36,866 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:18:06] 2025-10-13 02:17:37,062 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:18:06] 2025-10-13 02:17:37,156 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:18:06] 2025-10-13 02:17:37,245 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:18:06] 2025-10-13 02:17:37,256 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:18:06] 2025-10-13 02:17:37,280 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:18:06] 2025-10-13 02:17:40,872 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:18:06] 2025-10-13 02:17:46,058 | INFO     | job.realtimelogging is not enabled
[2025-10-12 22:18:06] 2025-10-13 02:17:47,061 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:18:06] 2025-10-13 02:17:59,531 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:18:06] 2025-10-13 02:18:01,508 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139895929128768)>', '<ExcThread(monitor, started 139895037212416)>']
[2025-10-12 22:18:06] 2025-10-13 02:18:05,516 | INFO     | PID=26893 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 22:18:06] 2025-10-13 02:18:05,517 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:18:06] 2025-10-13 02:18:05,517 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:18:06] 2025-10-13 02:18:05,517 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:18:06] 2025-10-13 02:18:05,517 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:18:06] 2025-10-13 02:18:05,517 | INFO     | [monitor] control thread has ended
[2025-10-12 22:18:06] 2025-10-13 02:18:06,528 | INFO     | all workflow threads have been joined
[2025-10-12 22:18:06] 2025-10-13 02:18:06,528 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:18:06] 2025-10-13 02:18:06,528 | INFO     | traces error code: 0
[2025-10-12 22:18:06] 2025-10-13 02:18:06,529 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:18:06] 2025-10-13 02:18:06,612 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:18:06] 2025-10-13 02:18:06,616 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:18:06] 2025-10-13 02:18:06,620 [wrapper] pilotpid: 26893
[2025-10-12 22:18:06] 2025-10-13 02:18:06,624 [wrapper] Pilot exit status: 0
[2025-10-12 22:18:06] 2025-10-13 02:18:06,640 [wrapper] pandaids: 6840749806
[2025-10-12 22:18:06] 2025-10-13 02:18:06,682 [wrapper] cleanup supervisor_pilot 11799 26894
[2025-10-12 22:18:06] 2025-10-13 02:18:06,686 [wrapper] Test setup, not cleaning
[2025-10-12 22:18:06] 2025-10-13 02:18:06,690 [wrapper] apfmon messages muted
[2025-10-12 22:18:06] 2025-10-13 02:18:06,694 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:18:06] 2025-10-13 02:18:06,698 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:18:06]  *** Error codes and diagnostics ***
[2025-10-12 22:18:06]     "exeErrorCode": 0,
[2025-10-12 22:18:06]     "exeErrorDiag": "",
[2025-10-12 22:18:06]     "pilotErrorCode": 0,
[2025-10-12 22:18:06]     "pilotErrorDiag": "",
[2025-10-12 22:18:06]  *** Listing of results directory ***
[2025-10-12 22:18:06] total 421340
[2025-10-12 22:18:06] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 16:55 pilot3.tar.gz
[2025-10-12 22:18:06] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 16:56 queuedata.json
[2025-10-12 22:18:06] -rwx------ 1 boincer umatlas     36292 Oct 12 16:56 runpilot2-wrapper.sh
[2025-10-12 22:18:06] -rw-r--r-- 1 boincer umatlas       100 Oct 12 21:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:18:06] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 21:03 run_atlas
[2025-10-12 22:18:06] -rw-r--r-- 1 boincer umatlas       105 Oct 12 21:03 job.xml
[2025-10-12 22:18:06] -rw-r--r-- 2 boincer umatlas 223462713 Oct 12 21:03 EVNT.46676267._004759.pool.root.1
[2025-10-12 22:18:06] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 21:03 input.tar.gz
[2025-10-12 22:18:06] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 21:03 start_atlas.sh
[2025-10-12 22:18:06] drwxrwx--x 2 boincer umatlas      4096 Oct 12 21:03 shared
[2025-10-12 22:18:06] -rw-r--r-- 1 boincer umatlas         0 Oct 12 21:03 boinc_lockfile
[2025-10-12 22:18:06] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 21:03 pandaJob.out
[2025-10-12 22:18:06] -rw------- 1 boincer umatlas    975603 Oct 12 21:03 agis_schedconf.cvmfs.json
[2025-10-12 22:18:06] -rw------- 1 boincer umatlas   1560580 Oct 12 21:03 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:18:06] drwx------ 5 boincer umatlas      4096 Oct 12 21:03 pilot3
[2025-10-12 22:18:06] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 22:11 init_data.xml
[2025-10-12 22:18:06] -rw------- 1 boincer umatlas 202038956 Oct 12 22:16 HITS.46676269._089234.pool.root.1
[2025-10-12 22:18:06] -rw-r--r-- 1 boincer umatlas       530 Oct 12 22:16 boinc_task_state.xml
[2025-10-12 22:18:06] -rw------- 1 boincer umatlas      1048 Oct 12 22:17 memory_monitor_summary.json
[2025-10-12 22:18:06] -rw------- 1 boincer umatlas    383777 Oct 12 22:17 log.46676269._089234.job.log.tgz.1
[2025-10-12 22:18:06] -rw------- 1 boincer umatlas      7847 Oct 12 22:17 heartbeat.json
[2025-10-12 22:18:06] -rw-r--r-- 1 boincer umatlas        27 Oct 12 22:18 wrapper_checkpoint.txt
[2025-10-12 22:18:06] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 22:18 boinc_mmap_file
[2025-10-12 22:18:06] -rw------- 1 boincer umatlas        95 Oct 12 22:18 pilot_heartbeat.json
[2025-10-12 22:18:06] -rw------- 1 boincer umatlas      5004 Oct 12 22:18 pilotlog.txt
[2025-10-12 22:18:06] -rw------- 1 boincer umatlas    640456 Oct 12 22:18 log.46676269._089234.job.log.1
[2025-10-12 22:18:06] -rw------- 1 boincer umatlas       357 Oct 12 22:18 output.list
[2025-10-12 22:18:06] -rw-r--r-- 1 boincer umatlas       620 Oct 12 22:18 runtime_log
[2025-10-12 22:18:06] -rw------- 1 boincer umatlas   1044480 Oct 12 22:18 result.tar.gz
[2025-10-12 22:18:06] -rw-r--r-- 1 boincer umatlas      8700 Oct 12 22:18 runtime_log.err
[2025-10-12 22:18:06] -rw------- 1 boincer umatlas       658 Oct 12 22:18 PUMODmjIIS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm01UMDmYjRRSn.diag
[2025-10-12 22:18:06] -rw-r--r-- 1 boincer umatlas     22331 Oct 12 22:18 stderr.txt
[2025-10-12 22:18:06] HITS file was successfully produced:
[2025-10-12 22:18:06] -rw------- 1 boincer umatlas 202038956 Oct 12 22:16 shared/HITS.pool.root.1
[2025-10-12 22:18:06]  *** Contents of shared directory: ***
[2025-10-12 22:18:06] total 417132
[2025-10-12 22:18:06] -rw-r--r-- 2 boincer umatlas 223462713 Oct 12 21:03 ATLAS.root_0
[2025-10-12 22:18:06] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 21:03 input.tar.gz
[2025-10-12 22:18:06] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 21:03 start_atlas.sh
[2025-10-12 22:18:06] -rw------- 1 boincer umatlas 202038956 Oct 12 22:16 HITS.pool.root.1
[2025-10-12 22:18:06] -rw------- 1 boincer umatlas   1044480 Oct 12 22:18 result.tar.gz
22:18:08 (23201): run_atlas exited; CPU time 47777.329038
22:18:08 (23201): called boinc_finish(0)

</stderr_txt>
]]>

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